PPI - iRefIndex UniProt A UniProt B Method PMID Interaction Type Edge type Num Participants Q27GK7 two hybrid 22065421 direct interaction X 2 Q27GK7 Q9FN11 two hybrid 22065421 direct interaction X 2 Q27GK7 Q96289 two hybrid 22065421 direct interaction X 2 Q27GK7 Q9C9E3 two hybrid 22065421 direct interaction X 2 Q27GK7 Q0WV90-1 two hybrid 22065421 direct interaction X 2 Q27GK7 two hybrid 22065421 direct interaction X 2 Q27GK7 Q84WU6 two hybrid 22065421 direct interaction X 2 Q27GK7 Q9T0D3 two hybrid 22065421 direct interaction X 2 Q27GK7 Q9S7L2 two hybrid 22065421 direct interaction X 2 Q9C5W9 Q27GK7 two hybrid 22065421 direct interaction X 2 Q9C6M5 Q27GK7 two hybrid 22065421 direct interaction X 2 Q9C688 Q27GK7 two hybrid 22065421 direct interaction X 2 O24409 Q27GK7 two hybrid 22065421 direct interaction X 2 F4I6G4 Q27GK7 two hybrid 22065421 direct interaction X 2 Q9FUD3 Q27GK7 two hybrid 22065421 direct interaction X 2 Q27GK7 two hybrid 22065421 direct interaction X 2 P47927 Q27GK7 two hybrid 22065421 direct interaction X 2 P49678 Q27GK7 two hybrid 22065421 direct interaction X 2 Q27GK7 Q9ZVC9 two hybrid 22065421 direct interaction X 2 Q27GK7 Q94JM3 two hybrid 22065421 direct interaction X 2 Q27GK7 Q9XED8 two hybrid 22065421 direct interaction X 2 Q27GK7 F4IIR3 two hybrid 22065421 direct interaction X 2 Q27GK7 Q38828 two hybrid 22065421 direct interaction X 2 Q27GK7 F4JXG9 two hybrid 22065421 direct interaction X 2 Q27GK7 Q9C518-2 two hybrid 22065421 direct interaction X 2 Q27GK7 two hybrid 22065421 direct interaction X 2 Q9SMX9 Q27GK7 two hybrid 22065421 direct interaction X 2 B3H5A8-2 Q27GK7 two hybrid 22065421 direct interaction X 2 Q9ZWM9 Q27GK7 two hybrid 22065421 direct interaction X 2 Q96320 Q27GK7 two hybrid 22065421 direct interaction X 2 Q9M886 Q27GK7 two hybrid 22065421 direct interaction X 2 Q9SB92 Q27GK7 two hybrid 16461579 physical association X 2 Q9SB92 Q27GK7 two hybrid 16461579 physical association X 2

PPI - PINA Gene A Gene B Method Publications Species A Species B Interaction Type Source Database Interaction Identidiers Experimental Role(s) Interactor A Experimental Role(s) Interactor B TPR4 HSFB1 MI:0018(two hybrid) 22065421 taxid:3702(Arabidopsis thaliana) taxid:3702(Arabidopsis thaliana) MI:0407(direct interaction) (biogrid) BIOGRID_8183 bait prey TPR4 MYB98 MI:0018(two hybrid) 22065421 taxid:3702(Arabidopsis thaliana) taxid:3702(Arabidopsis thaliana) MI:0407(direct interaction) (biogrid) BIOGRID_8432 bait prey TPR4 MDH9.23 MI:0018(two hybrid) 22065421 taxid:3702(Arabidopsis thaliana) taxid:3702(Arabidopsis thaliana) MI:0407(direct interaction) (biogrid) BIOGRID_8276 bait prey TPR1 TPR4 MI:0018(two hybrid) 22065421 taxid:3702(Arabidopsis thaliana) taxid:3702(Arabidopsis thaliana) MI:0407(direct interaction) (biogrid) BIOGRID_8255 prey bait TPR4 ARF2 MI:0018(two hybrid) 22065421 taxid:3702(Arabidopsis thaliana) taxid:3702(Arabidopsis thaliana) MI:0407(direct interaction) (biogrid) BIOGRID_8239 bait prey TPR4 ZAT10 MI:0018(two hybrid) 22065421 taxid:3702(Arabidopsis thaliana) taxid:3702(Arabidopsis thaliana) MI:0407(direct interaction) (biogrid) BIOGRID_8207 bait prey TPR4 ARF18 MI:0018(two hybrid) 22065421 taxid:3702(Arabidopsis thaliana) taxid:3702(Arabidopsis thaliana) MI:0407(direct interaction) (biogrid) BIOGRID_8243 bait prey TPR4 At1g51120 MI:0018(two hybrid) 22065421 taxid:3702(Arabidopsis thaliana) taxid:3702(Arabidopsis thaliana) MI:0407(direct interaction) (biogrid) BIOGRID_8340 bait prey TPR4 TEM1 MI:0018(two hybrid) 22065421 taxid:3702(Arabidopsis thaliana) taxid:3702(Arabidopsis thaliana) MI:0407(direct interaction) (biogrid) BIOGRID_8178 bait prey TPR4 TCP8 MI:0018(two hybrid) 22065421 taxid:3702(Arabidopsis thaliana) taxid:3702(Arabidopsis thaliana) MI:0407(direct interaction) (biogrid) BIOGRID_8429 bait prey TPR4 WUS MI:0018(two hybrid)|MI:0018(two hybrid) 16461579 taxid:3702(Arabidopsis thaliana) taxid:3702(Arabidopsis thaliana) MI:0915(physical association)|MI:0915(physical association) (intact)|(intact) UniProt_12370|UniProt_12367 prey|prey bait|bait IAA19 TPR4 MI:0018(two hybrid) 22065421 taxid:3702(Arabidopsis thaliana) taxid:3702(Arabidopsis thaliana) MI:0407(direct interaction) (biogrid) BIOGRID_8332 prey bait TPR4 LBD37 MI:0018(two hybrid) 22065421 taxid:3702(Arabidopsis thaliana) taxid:3702(Arabidopsis thaliana) MI:0407(direct interaction) (biogrid) BIOGRID_8168 bait prey TPR4 TIFY11B MI:0018(two hybrid) 22065421 taxid:3702(Arabidopsis thaliana) taxid:3702(Arabidopsis thaliana) MI:0407(direct interaction) (biogrid) BIOGRID_8224 bait prey TPR4 ARF9 MI:0018(two hybrid) 22065421 taxid:3702(Arabidopsis thaliana) taxid:3702(Arabidopsis thaliana) MI:0407(direct interaction) (biogrid) BIOGRID_8242 bait prey TPR4 RAP2-7 MI:0018(two hybrid) 22065421 taxid:3702(Arabidopsis thaliana) taxid:3702(Arabidopsis thaliana) MI:0407(direct interaction) (biogrid) BIOGRID_8282 bait prey TPR4 TOE2 MI:0018(two hybrid) 22065421 taxid:3702(Arabidopsis thaliana) taxid:3702(Arabidopsis thaliana) MI:0407(direct interaction) (biogrid) BIOGRID_8298 bait prey TPR4 ZFP11 MI:0018(two hybrid) 22065421 taxid:3702(Arabidopsis thaliana) taxid:3702(Arabidopsis thaliana) MI:0407(direct interaction) (biogrid) BIOGRID_8210 bait prey AP2 TPR4 MI:0018(two hybrid) 22065421 taxid:3702(Arabidopsis thaliana) taxid:3702(Arabidopsis thaliana) MI:0407(direct interaction) (biogrid) BIOGRID_8328 prey bait TPR4 LBD41 MI:0018(two hybrid) 22065421 taxid:3702(Arabidopsis thaliana) taxid:3702(Arabidopsis thaliana) MI:0407(direct interaction) (biogrid) BIOGRID_8163 bait prey TPR4 ARF17 MI:0018(two hybrid) 22065421 taxid:3702(Arabidopsis thaliana) taxid:3702(Arabidopsis thaliana) MI:0407(direct interaction) (biogrid) BIOGRID_8294 bait prey TPR4 BZIP9 MI:0018(two hybrid) 22065421 taxid:3702(Arabidopsis thaliana) taxid:3702(Arabidopsis thaliana) MI:0407(direct interaction) (biogrid) BIOGRID_8313 bait prey IAA2 TPR4 MI:0018(two hybrid) 22065421 taxid:3702(Arabidopsis thaliana) taxid:3702(Arabidopsis thaliana) MI:0407(direct interaction) (biogrid) BIOGRID_8289 prey bait TPR4 HSFB2B MI:0018(two hybrid) 22065421 taxid:3702(Arabidopsis thaliana) taxid:3702(Arabidopsis thaliana) MI:0407(direct interaction) (biogrid) BIOGRID_8336 bait prey TPR4 At1g30810 MI:0018(two hybrid) 22065421 taxid:3702(Arabidopsis thaliana) taxid:3702(Arabidopsis thaliana) MI:0407(direct interaction) (biogrid) BIOGRID_8220 bait prey TPR4 RVE7 MI:0018(two hybrid) 22065421 taxid:3702(Arabidopsis thaliana) taxid:3702(Arabidopsis thaliana) MI:0407(direct interaction) (biogrid) BIOGRID_8173 bait prey TPR4 RAV1 MI:0018(two hybrid) 22065421 taxid:3702(Arabidopsis thaliana) taxid:3702(Arabidopsis thaliana) MI:0407(direct interaction) (biogrid) BIOGRID_8321 bait prey TPR4 IAA10 MI:0018(two hybrid) 22065421 taxid:3702(Arabidopsis thaliana) taxid:3702(Arabidopsis thaliana) MI:0407(direct interaction) (biogrid) BIOGRID_8287 bait prey TPR4 FRS3 MI:0018(two hybrid) 22065421 taxid:3702(Arabidopsis thaliana) taxid:3702(Arabidopsis thaliana) MI:0407(direct interaction) (biogrid) BIOGRID_8211 bait prey TPR4 SPL1 MI:0018(two hybrid) 22065421 taxid:3702(Arabidopsis thaliana) taxid:3702(Arabidopsis thaliana) MI:0407(direct interaction) (biogrid) BIOGRID_8324 bait prey

PPI - HINT Gene A Gene B PMID Method Quality RVE7 TPR4 22065421 0018 LC JMJ18 TPR4 22065421 0018 LC IAA19 TPR4 22065421 0018 LC SPL TPR4 25378179,25527103 0018,0018 LC AP2 TPR4 22065421 0018 LC IAA2 TPR4 22065421 0018 LC TPR1 TPR4 22065421 0018 LC TPR4 IAA10 22065421 0018 LC TPR4 ARF17 22065421 0018 LC TPR4 BZIP23 22065421 0018 LC TPR4 WOX5 26028217,26028217 0055,0004 LC TPR4 BZR1 24938363 0018 LC TPR4 MDH9.23 22065421 0018 LC TPR4 ARF2 22065421 0018 LC TPR4 ZAT10 22065421 0018 LC TPR4 HSFB1 22065421 0018 LC TPR4 TCP8 22065421 0018 LC TPR4 ARF18 22065421 0018 LC TPR4 Q9C688 22065421 0018 LC TPR4 TEM1 22065421 0018 LC TPR4 TIFY11B 22065421 0018 LC TPR4 LBD37 22065421 0018 LC TPR4 BZIP9 22065421 0018 LC TPR4 Q9LRM4 22065421 0018 LC TPR4 TOE2 22065421 0018 LC TPR4 LBD41 22065421 0018 LC TPR4 MYB98 22065421 0018 LC TPR4 WUS 16461579 0018 LC TPR4 RAP2-7 22065421 0018 LC TPR4 ZFP11 22065421 0018 LC TPR4 SPL1 22065421 0018 LC TPR4 HSFB2B 22065421 0018 LC TPR4 ARF9 22065421 0018 LC TPR4 FRS3 22065421 0018 LC TPR4 RAV1 22065421 0018 LC TPR4 WOX5 26028217,26028217 0055,0004 LC

PPI - Mentha Protein A Protein B Gene A Gene B Score PMID Q8H1D2 Q27GK7 WOX5 TPR4 0.454 26028217 Q27GK7 O81836 TPR4 SPL {ECO:0000303|PUBMED:10465788} 0.523 25378179,25527103 Q9SB92 Q27GK7 WUS TPR4 0.523 16461579 Q27GK7 B3H5A8 TPR4 RVE7 0.183 22065421 Q27GK7 F4I6G4 TPR4 JMJ18 0.183 22065421 Q27GK7 O24409 TPR4 IAA19 0.183 22065421 Q27GK7 P47927 TPR4 AP2 0.183 22065421 Q27GK7 P49678 TPR4 IAA2 0.183 22065421 Q27GK7 Q0WV90 TPR4 TPR1 0.183 22065421 Q38828 Q27GK7 IAA10 TPR4 0.183 22065421 Q84WU6 Q27GK7 ARF17 TPR4 0.183 22065421 Q8GTS2 Q27GK7 BZIP23 {ECO:0000303|PUBMED:11906833} TPR4 0.183 22065421 Q8S307 Q27GK7 BZR1 TPR4 0.309 24938363 Q94JM3 Q27GK7 ARF2 TPR4 0.183 22065421 Q96289 Q27GK7 ZAT10 TPR4 0.183 22065421 Q96320 Q27GK7 HSFB1 TPR4 0.183 22065421 Q9C518 Q27GK7 TCP8 TPR4 0.183 22065421 Q9C5W9 Q27GK7 ARF18 TPR4 0.183 22065421 Q9C688 Q27GK7 Q9C688 TPR4 0.183 22065421 Q9C6M5 Q27GK7 TEM1 TPR4 0.183 22065421 Q9C9E3 Q27GK7 TIFY11B TPR4 0.183 22065421 Q9FN11 Q27GK7 LBD37 TPR4 0.183 22065421 Q9FUD3 Q27GK7 BZIP9 TPR4 0.183 22065421 Q9LRM4 Q27GK7 MIP1B {ECO:0000303|PUBMED:27015278} TPR4 0.183 22065421 Q9LVG2 Q27GK7 TOE2 TPR4 0.183 22065421 Q9M886 Q27GK7 LBD41 TPR4 0.183 22065421 Q9S7L2 Q27GK7 MYB98 TPR4 0.183 22065421 Q9SK03 Q27GK7 RAP2-7 TPR4 0.183 22065421 Q9SMX9 Q27GK7 SPL1 TPR4 0.183 22065421 Q9T0D3 Q27GK7 HSFB2B TPR4 0.183 22065421 Q9XED8 Q27GK7 ARF9 TPR4 0.183 22065421 Q9ZVC9 Q27GK7 FRS3 TPR4 0.183 22065421 Q9ZWM9 Q27GK7 RAV1 TPR4 0.183 22065421