PPI - iRefIndex UniProt A UniProt B Method PMID Interaction Type Edge type Num Participants Q9ZSY8 Q38827 two hybrid 21734647 physical association X 2 P93024 Q38827 split firefly luciferase complementation 22096563 physical association X 2 O24407 Q38827 two hybrid 21734647 physical association X 2 Q9C5W9 Q38827 split firefly luciferase complementation 22096563 physical association X 2 Q38826 Q38827 two hybrid 21734647 physical association X 2 Q38829 Q38827 two hybrid 21734647 physical association X 2 O24409 Q38827 two hybrid 21734647 physical association X 2 P93830 Q38827 two hybrid 21734647 physical association X 2 Q38827 P49677 two hybrid 21734647 physical association X 2 Q38827 P49678 two hybrid 21734647 physical association X 2 Q38827 Q38827 two hybrid 21734647 physical association X 2 Q38827 Q38830 two hybrid 21734647 physical association X 2 Q38827 Q0WU05 two hybrid 21734647 physical association X 2 Q38827 Q38832 two hybrid 21734647 physical association X 2 Q38827 O24408 two hybrid 21734647 physical association X 2 Q38827 Q8LAL2 two hybrid 21734647 physical association X 2 Q38827 Q9XFM0 two hybrid 21734647 physical association X 2 Q38827 Q9C5X0 two hybrid 21734647 physical association X 2 Q38827 Q9ZTX9 split firefly luciferase complementation 22096563 physical association X 2 Q38827 P49677 two hybrid 9342315 physical association X 2 P33077 Q38827 two hybrid 21734647 physical association X 2 Q9C8N7 Q38827 two hybrid 21734647 physical association X 2 O23661 Q38827 two hybrid 21734647 physical association X 2 Q38827 Q38828 two hybrid 21734647 physical association X 2 Q38827 Q9C966 two hybrid 21734647 physical association X 2 Q38822 Q38827 two hybrid 21734647 physical association X 2 Q9ZTX8 Q38827 two hybrid 21734647 physical association X 2 P33078 Q38827 two hybrid 21734647 physical association X 2

PPI - PINA Gene A Gene B Method Publications Species A Species B Interaction Type Source Database Interaction Identidiers Experimental Role(s) Interactor A Experimental Role(s) Interactor B ARF5 IAA9 MI:0090(protein complementation assay)|- 22096563 taxid:3702(Arabidopsis thaliana) taxid:3702(Arabidopsis thaliana) MI:0407(direct interaction)|MI:0915(physical association) (biogrid)|(intact) BIOGRID_14981|UniProt_8952 prey|neutral component bait|neutral component IAA8 IAA9 MI:0096(pull down) 21734647 taxid:3702(Arabidopsis thaliana) taxid:3702(Arabidopsis thaliana) MI:0915(physical association) (intact) UniProt_8500 bait prey IAA9 IAA12 MI:0096(pull down) 21734647 taxid:3702(Arabidopsis thaliana) taxid:3702(Arabidopsis thaliana) MI:0915(physical association) (intact) UniProt_8516 bait prey IAA9 IAA13 MI:0096(pull down) 21734647 taxid:3702(Arabidopsis thaliana) taxid:3702(Arabidopsis thaliana) MI:0915(physical association) (intact) UniProt_8517 bait prey IAA9 IAA14 MI:0096(pull down) 21734647 taxid:3702(Arabidopsis thaliana) taxid:3702(Arabidopsis thaliana) MI:0915(physical association) (intact) UniProt_8518 bait prey IAA9 IAA10 MI:0096(pull down) 21734647 taxid:3702(Arabidopsis thaliana) taxid:3702(Arabidopsis thaliana) MI:0915(physical association) (intact) UniProt_8514 bait prey IAA9 IAA11 MI:0096(pull down) 21734647 taxid:3702(Arabidopsis thaliana) taxid:3702(Arabidopsis thaliana) MI:0915(physical association) (intact) UniProt_8515 bait prey ARF3 IAA9 MI:0096(pull down) 21734647 taxid:3702(Arabidopsis thaliana) taxid:3702(Arabidopsis thaliana) MI:0915(physical association) (intact) UniProt_8218 bait prey IAA3 IAA9 MI:0096(pull down) 21734647 taxid:3702(Arabidopsis thaliana) taxid:3702(Arabidopsis thaliana) MI:0915(physical association) (intact) UniProt_8426 bait prey IAA2 IAA9 MI:0096(pull down) 21734647 taxid:3702(Arabidopsis thaliana) taxid:3702(Arabidopsis thaliana) MI:0915(physical association) (intact) UniProt_8416 bait prey IAA1 IAA9 MI:0018(two hybrid)|MI:0096(pull down) 21734647,9342315 taxid:3702(Arabidopsis thaliana) taxid:3702(Arabidopsis thaliana) MI:0915(physical association)|MI:0915(physical association) (intact)|(intact) UniProt_8094|UniProt_8393 bait|bait prey|prey IAA18 IAA9 MI:0096(pull down) 21734647 taxid:3702(Arabidopsis thaliana) taxid:3702(Arabidopsis thaliana) MI:0915(physical association) (intact) UniProt_8522 prey bait IAA9 ARF4 - 22096563 taxid:3702(Arabidopsis thaliana) taxid:3702(Arabidopsis thaliana) MI:0915(physical association) (intact) UniProt_8966 neutral component neutral component IAA9 ARF6 MI:0096(pull down) 21734647 taxid:3702(Arabidopsis thaliana) taxid:3702(Arabidopsis thaliana) MI:0915(physical association) (intact) UniProt_8250 prey bait IAA9 IAA27 MI:0096(pull down) 21734647 taxid:3702(Arabidopsis thaliana) taxid:3702(Arabidopsis thaliana) MI:0915(physical association) (intact) UniProt_8525 bait prey IAA9 IAA26 MI:0096(pull down) 21734647 taxid:3702(Arabidopsis thaliana) taxid:3702(Arabidopsis thaliana) MI:0915(physical association) (intact) UniProt_8524 bait prey IAA9 IAA15 MI:0096(pull down) 21734647 taxid:3702(Arabidopsis thaliana) taxid:3702(Arabidopsis thaliana) MI:0915(physical association) (intact) UniProt_8519 bait prey IAA16 IAA9 MI:0096(pull down) 21734647 taxid:3702(Arabidopsis thaliana) taxid:3702(Arabidopsis thaliana) MI:0915(physical association) (intact) UniProt_8520 prey bait IAA4 IAA9 MI:0096(pull down) 21734647 taxid:3702(Arabidopsis thaliana) taxid:3702(Arabidopsis thaliana) MI:0915(physical association) (intact) UniProt_8444 bait prey IAA9 ARF22 MI:0096(pull down) 21734647 taxid:3702(Arabidopsis thaliana) taxid:3702(Arabidopsis thaliana) MI:0915(physical association) (intact) UniProt_8379 prey bait IAA9 IAA34 MI:0096(pull down) 21734647 taxid:3702(Arabidopsis thaliana) taxid:3702(Arabidopsis thaliana) MI:0915(physical association) (intact) UniProt_8527 bait prey IAA9 ARF18 - 22096563 taxid:3702(Arabidopsis thaliana) taxid:3702(Arabidopsis thaliana) MI:0915(physical association) (intact) UniProt_8977 neutral component neutral component IAA9 IAA28 MI:0096(pull down) 21734647 taxid:3702(Arabidopsis thaliana) taxid:3702(Arabidopsis thaliana) MI:0915(physical association) (intact) UniProt_8526 bait prey IAA5 IAA9 MI:0096(pull down) 21734647 taxid:3702(Arabidopsis thaliana) taxid:3702(Arabidopsis thaliana) MI:0915(physical association) (intact) UniProt_8463 bait prey IAA17 IAA9 MI:0096(pull down) 21734647 taxid:3702(Arabidopsis thaliana) taxid:3702(Arabidopsis thaliana) MI:0915(physical association) (intact) UniProt_8521 prey bait IAA19 IAA9 MI:0096(pull down) 21734647 taxid:3702(Arabidopsis thaliana) taxid:3702(Arabidopsis thaliana) MI:0915(physical association) (intact) UniProt_8523 prey bait

PPI - HINT Gene A Gene B PMID Method Quality ARF3 IAA9 21734647 0018 LC IAA16 IAA9 21734647 0018 LC IAA18 IAA9 21734647 0018 LC IAA19 IAA9 21734647 0018 LC IAA4 IAA9 21734647 0018 LC IAA5 IAA9 21734647 0018 LC IAA1 IAA9 9342315,21734647 0018,0018 LC IAA2 IAA9 21734647 0018 LC ARF7 IAA9 25566309 0018 LC ARF5 IAA9 22096563,22096563,25566309 1204,0090,0018 LC IAA17 IAA9 21734647 0018 LC IAA3 IAA9 21734647 0018 LC IAA8 IAA9 21734647 0018 LC IAA9 IAA9 21734647 0018 LC IAA9 IAA10 21734647 0018 LC IAA9 IAA11 21734647 0018 LC IAA9 IAA12 21734647 0018 LC IAA9 IAA13 21734647 0018 LC IAA9 IAA14 21734647 0018 LC IAA9 IAA26 21734647 0018 LC IAA9 ARF18 22096563 1204 LC IAA9 IAA34 21734647 0018 LC IAA9 ARF22 21734647 0018 LC IAA9 IAA15 21734647 0018 LC IAA9 ARF8 25566309 0018 LC IAA9 IAA28 21734647 0018 LC IAA9 IAA27 21734647 0018 LC IAA9 ARF6 21734647,25566309 0018,0018 LC IAA9 ARF4 22096563,25566309 1204,0018 LC

PPI - Mentha Protein A Protein B Gene A Gene B Score PMID Q9ZTX8 Q38827 ARF6 IAA9 0.454 21734647,25566309 Q9ZSY8 Q38827 IAA27 IAA9 0.332 21734647 Q9ZTX9 Q38827 ARF4 IAA9 0.286 22096563,25566309 Q9C5X0 Q38827 IAA34 IAA9 0.332 21734647 Q38827 Q38826 IAA9 IAA8 0.332 21734647 Q8LAL2 Q38827 IAA26 IAA9 0.332 21734647 Q38827 Q38827 IAA9 IAA9 0.376 21734647 Q38827 P33078 IAA9 IAA5 0.332 21734647 Q38827 O24408 IAA9 IAA18 0.332 21734647 Q38827 Q38822 IAA9 IAA3 0.332 21734647 Q9C8N7 Q38827 ARF22 IAA9 0.332 21734647 Q9XFM0 Q38827 IAA28 IAA9 0.332 21734647 Q38828 Q38827 IAA10 IAA9 0.332 21734647 Q38829 Q38827 IAA11 IAA9 0.332 21734647 Q38830 Q38827 IAA12 IAA9 0.332 21734647 Q38831 Q38827 IAA13 IAA9 0.332 21734647 Q38832 Q38827 IAA14 IAA9 0.332 21734647 Q38827 P93830 IAA9 IAA17 0.332 21734647 Q38827 O23661 IAA9 ARF3 0.332 21734647 Q38827 O24407 IAA9 IAA16 0.332 21734647 Q38827 O24409 IAA9 IAA19 0.332 21734647 Q38827 P49678 IAA9 IAA2 0.332 21734647 Q38827 P33077 IAA9 IAA4 0.332 21734647 Q9C5W9 Q38827 ARF18 IAA9 0.126 22096563 Q9C966 Q38827 IAA15 IAA9 0.183 21734647 Q9FGV1 Q38827 ARF8 IAA9 0.183 25566309 Q38827 P93022 IAA9 ARF7 0.183 25566309 Q38827 P93024 IAA9 ARF5 0.416 22096563,25566309 Q38827 P49677 IAA9 IAA1 0.539 9342315,21734647