DNA & RNA Element - UTRdb Gene Name Type ASPicDB UTRaspic Refseq ID Genome FGR 3'UTR 7dfef8940f BA040917 NM_001042729 chr1:27811387-27823013:- FGR 3'UTR b958ad062b BA040918 NM_001042729 chr1:27811395-27823013:- FGR 3'UTR c8bbcbf948 BA040919 NM_001042729 chr1:27811395-27823013:- FGR 3'UTR f91f14ae6b BA040920 NM_001042729 chr1:27811395-27823013:- FGR 3'UTR 4e56b5bc7e BA040921 NM_001042729 chr1:27811387-27823013:- FGR 3'UTR 773d4adc47 BA040922 NM_001042729 chr1:27811387-27823013:- FGR 3'UTR b140582e33 NM_001042729 chr1:27811395-27834283:- FGR 3'UTR 468600d696 NM_001042729 chr1:27811395-27816023:- FGR 5'UTR 7dfef8940f CA063191 NM_001042729 chr1:27812013-27834314:- FGR 5'UTR b958ad062b CA063192 NM_001042729 chr1:27812013-27834284:- FGR 5'UTR c8bbcbf948 CA063193 NM_001042729 chr1:27812013-27834659:- FGR 5'UTR f91f14ae6b CA063194 NM_001042729 chr1:27812013-27833674:- FGR 5'UTR 4e56b5bc7e CA063195 NM_001042729 chr1:27812013-27825693:- FGR 5'UTR 773d4adc47 CA063196 NM_001042729 chr1:27812013-27825338:- FGR 5'UTR 3aba84e073 NM_001042729 chr1:27812318-27834284:- FGR 5'UTR 5ec9a6b8f4 NM_001042729 chr1:27812013-27824405:-

DNA & RNA Element - AREsite Gene Name Motif CDS Area ARE Area Evidence FGR; SRC2 ATTTA 147-1736 2042-2046 FGR; SRC2 WTATTTATW 147-1736 2040-2048 FGR; SRC2 WWATTTAWW 147-1736 2040-2048

DNA & RNA Element - circBase circRNA ID Chrom Start End Strand hsa_circ_0011079 chr1 27949687 27951662 - hsa_circ_0011078 chr1 27942199 27943517 -

DNA & RNA Element - CircNet Circ ID GITPosition Express Symbol Entrez Category Strand Refered Name hsa-circ-FGR-antisense.5 NM_001042729Tchr1:27939285-27939388 none FGR 2268 protein-coding + not_available hsa-circ-FGR-antisense.6 NM_001042729Tchr1:27939402-27939533 none FGR 2268 protein-coding + not_available hsa-circ-FGR-overlap.1 NM_005248Tchr1:27939304-27941978 expressed FGR 2268 protein-coding - not_available hsa-circ-FGR-overlap.2 NM_005248Tchr1:27949687-27951662 expressed FGR 2268 protein-coding - hsa_circ_0011079 hsa-circ-FGR.2 NM_001042729Tchr1:27942199-27943517 none FGR 2268 protein-coding - hsa_circ_0011078

DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0004508 hsa-miR-92a-2* 2268 FGR cauuacGUUGUUUAGGGGUGGg || : ||||||||| cuuucuCACUCCAUCCCCACCc 2 17 260 281 [hg19:1:27939144-27939165:-] 0.5461 152 7 -22.27 -0.7572 MIMAT0000260 hsa-miR-182* 2268 FGR aucaaCCGUUCAGAUCUUGGu ||| :| :||||||| ccccaGGCUGGCUUAGAACCc 2 17 74 94 [hg19:1:27939331-27939351:-] 0.4983 156 7 -17.17 -0.1991 MIMAT0000731 hsa-miR-378* 2268 FGR uguguccuggaccUCAGUCCUc |||||||| cuguaaguuacaaAGUCAGGAa 2 10 425 446 [hg19:1:27938979-27939000:-] 0.5266 145 7 -12.75 -0.9292 MIMAT0004698 hsa-miR-135b* 2268 FGR ggguaccGAAAAUCGGGAUGUa ||| : ||||||| uuuuccaCUUAGGCCCCUACAu 2 16 229 250 [hg19:1:27939175-27939196:-] 0.5284 147 7 -18.22 -0.1701 MIMAT0002808 hsa-miR-511 2268 FGR acuGACGU---CUCGUUUU-CUGUg |||:| ||:|||| |||| auuCUGUAAAUAAGUAAAAUGACAa 2 19 579 603 [hg19:1:27938822-27938846:-] 0.5344 121 0 -14.93 -1.2113 MIMAT0002830 hsa-miR-520f 2268 FGR uuGGGAGAUUUUCCUUCGUGAa | ||||:: ||||||| ucCGCUCUGGCCCCAAGCACUa 2 21 199 220 [hg19:1:27939205-27939226:-] 0.5475 152 7 -18.76 -0.4543 MIMAT0003242 hsa-miR-577 2268 FGR guccAUGGUUAUAAAAUAGAu |||: |||||||| uuccUACUCUCCUUUUAUCUc 2 18 353 373 [hg19:1:27939052-27939072:-] 0.5538 149 7 -6.40 -0.5749 MIMAT0003244 hsa-miR-579 2268 FGR uuagcgccaaauauggUUUACUu |||||| auucuguaaauaaguaAAAUGAc 2 8 579 601 [hg19:1:27938824-27938846:-] 0.5344 120 6 -4.59 -0.1240 MIMAT0003247 hsa-miR-582-5p 2268 FGR ucAUUGACCAACUUGUUGACAUu ||::| || | ||||||| ucUAGUUAUUUAUAAAACUGUAu 2 22 299 321 [hg19:1:27939104-27939126:-] 0.5638 157 7 -8.73 -1.0019 MIMAT0003268 hsa-miR-600 2268 FGR cucguuccGAGAACAGACAUUCa ||: |||||||||| ucuauucuCUUGUGUCUGUAAGu 2 16 410 432 [hg19:1:27938993-27939015:-] 0.5228 163 7 -21.46 -0.8352 MIMAT0003268 hsa-miR-600 2268 FGR cuCGUUCCGAGAAC--AGACAUUca |: :| :| ||| ||||||| guGUUGGUUUAUUGAUUCUGUAAau 3 22 565 589 [hg19:1:27938836-27938860:-] 0.5344 136 0 -11.76 -0.1004 MIMAT0003269 hsa-miR-601 2268 FGR gaGGAGGUUGUUAGGA-UCUGGu || || | |:| || ||||| ccCCACCCAAAGUGCUCAGACCu 2 21 274 296 [hg19:1:27939129-27939151:-] 0.5461 128 0 -16.96 -0.4723 MIMAT0003271 hsa-miR-603 2268 FGR cguuuucauuaacGUCACACAc :||||||| ccaccucucugaaUAGUGUGUa 2 10 542 563 [hg19:1:27938862-27938883:-] 0.5344 141 7 -10.31 -0.9987 MIMAT0004804 hsa-miR-615-5p 2268 FGR cuaggcUCGUGGCC--CCUGGGGg ||: ::|| ||||||| aggaaaAGUCUUGGCUGGACCCCu 2 17 442 465 [hg19:1:27938960-27938983:-] 0.5266 147 7 -22.50 -0.2808 MIMAT0004805 hsa-miR-616 2268 FGR gacgaguuugggaggUUACUGa |||||| ucuguaaauaaguaaAAUGACa 2 8 581 602 [hg19:1:27938823-27938844:-] 0.5344 120 6 -10.21 -0.2204 MIMAT0003288 hsa-miR-619 2268 FGR ugacccGUGUUUGUACAGGUCCAg | || | |||||||| uuuuauCUCACUCUAGUCCAGGUg 2 19 365 388 [hg19:1:27939037-27939060:-] 0.5364 150 7 -17.77 -0.2641 MIMAT0004807 hsa-miR-624 2268 FGR uccaUUAUGGUUAUGGAACAc |:|:|: | ||||||| ccaaAGUGCUCAGACCUUGUc 2 18 280 300 [hg19:1:27939125-27939145:-] 0.5638 157 7 -15.24 -0.4180 MIMAT0003298 hsa-miR-629* 2268 FGR cgACCCGAAUGCAA---CCCUCUUg ||||| | ||| ||||||| ucUGGGCCCAGGUUUGAGGGAGAAg 2 21 502 526 [hg19:1:27938899-27938923:-] 0.5305 159 7 -25.49 -0.2544 MIMAT0003306 hsa-miR-636 2268 FGR acGCCCGCCCUGCUCGUUCGUGu || | || | ||||||| ucCGCUCUGGCC--CCAAGCACu 2 22 199 219 [hg19:1:27939206-27939226:-] 0.5475 142 7 -13.40 -0.3547 MIMAT0003307 hsa-miR-637 2268 FGR ugCGUCUCG-GGCUUUCGGGGGUCa || | | :| ||||||||||| gaGCUGUUCUUCCAAAGCCCCCAGg 2 23 56 80 [hg19:1:27939345-27939369:-] 0.4983 165 7 -28.29 -0.1816 MIMAT0003324 hsa-miR-661 2268 FGR ugcgcguccggUCUCUGGGUC-CGu :|||:||||| || auggggcaaaaGGAGGCCCAGAGCu 2 14 165 189 [hg19:1:27939236-27939260:-] 0.5667 121 0 -28.38 -0.2157 MIMAT0005458 hsa-miR-1224-5p 2268 FGR ggUGGAGGGCUCAGGAGUg || : :|| |||||| ugACAAUAUGAAUCCUCAa 2 18 598 616 [hg19:1:27938809-27938827:-] 0.5344 121 6 -14.11 -0.1418 MIMAT0005798 hsa-miR-1185 2268 FGR uugUA-UGUUUCCCAUAGGAGa || |||| | |||||| aaaAUGACAAUAUGAAUCCUCa 2 19 594 615 [hg19:1:27938810-27938831:-] 0.5344 125 6 -10.61 -0.1501 MIMAT0010364 hsa-miR-761 2268 FGR acacagucaaaguGGGACGACg :||||||| ggcuggaccccuuUCCUGCUGg 2 10 454 475 [hg19:1:27938950-27938971:-] 0.5266 141 7 -14.80 -0.2025 MIMAT0003945 hsa-miR-765 2268 FGR guAGUGGAAGGA-AGAGG-AGGu | :||||:|| |||| ||| ugUAGCCUUUCUCACUCCAUCCc 2 20 254 276 [hg19:1:27939149-27939171:-] 0.5461 126 0 -20.24 -0.3451 MIMAT0004919 hsa-miR-541* 2268 FGR ucacccUGGCUGUCGU-CUUAGGAaa | :|||| :| ||||||| aaguaaAAUGACAAUAUGAAUCCUca 3 20 590 615 [hg19:1:27938810-27938835:-] 0.5344 142 0 -18.64 -0.1170 MIMAT0004927 hsa-miR-708* 2268 FGR gaucuuCGAGUGU----CAGAUCAAc ||||| | |||||||| caaaguGCUCAGACCUUGUCUAGUUa 2 17 281 306 [hg19:1:27939119-27939144:-] 0.5638 151 7 -17.01 -0.8143 MIMAT0004949 hsa-miR-877 2268 FGR gggacgcGGUAGAG-GAGAUg ::||||| ||||| ucuccuuUUAUCUCACUCUAg 2 14 360 380 [hg19:1:27939045-27939065:-] 0.5364 121 0 -18.49 -0.5975 MIMAT0005906 hsa-miR-1255a 2268 FGR uuagaugaaagaaacGAGUAGGa ||||||| gcccagagcugaucuCUCAUCCg 2 9 180 202 [hg19:1:27939223-27939245:-] 0.5667 140 7 -14.54 -0.2168 MIMAT0005937 hsa-miR-1279 2268 FGR ucUUUCUUCGUUAUACu ||| :| ||||||| uaAAAUGA-CAAUAUGa 2 16 593 608 [hg19:1:27938817-27938832:-] 0.5344 149 7 -9.52 -1.2421 MIMAT0005945 hsa-miR-1255b 2268 FGR uuggugaaagaaacGAGUAGGc ||||||| cccagagcugaucuCUCAUCCg 2 9 181 202 [hg19:1:27939223-27939244:-] 0.5667 140 7 -19.26 -0.2168 MIMAT0005948 hsa-miR-664* 2268 FGR uaGGUUAGUA-AAAGGGAUC-GGUCa || |:|| | |:|||| |||| cuCCUUUUAUCUCACUCUAGUCCAGg 2 23 361 386 [hg19:1:27939039-27939064:-] 0.5364 125 0 -19.36 -0.4393 MIMAT0005952 hsa-miR-1321 2268 FGR uaGUGUAAGUGGAGGGAc :::|| :|||||||| acUGUAUGUACCUCCCUc 2 17 315 332 [hg19:1:27939093-27939110:-] 0.5588 156 7 -18.27 -0.9798 MIMAT0014979 hsa-miR-3117 2268 FGR gaccGUGAUAUACUCAGGAUa | | ||| |||||||| agaaCCCCAUA-GAGUCCUAg 2 18 88 107 [hg19:1:27939318-27939337:-] 0.4857 155 7 -13.62 -0.1234 MIMAT0014985 hsa-miR-3123 2268 FGR cuaauuuGUUAAGAGAc | ||||||| cuacccuCUAUUCUCUu 2 11 404 420 [hg19:1:27939005-27939021:-] 0.5191 142 7 -6.63 -0.5302 MIMAT0014997 hsa-miR-3132 2268 FGR aggagaCUCGAGGAAGAGAUGGGu || :|:| :||||||| ugccaaGAAUUUCCCUUCUACCCu 2 19 387 410 [hg19:1:27939015-27939038:-] 0.5191 154 7 -20.81 -0.6899 MIMAT0014999 hsa-miR-378b 2268 FGR aaGACGGAGGUUCAGGUCa || |||: ||||||| auCUCACUCU-AGUCCAGg 2 18 369 386 [hg19:1:27939039-27939056:-] 0.5364 151 7 -19.56 -0.4237 MIMAT0015018 hsa-miR-3146 2268 FGR gguaagaaagaUAGGAUCGUAc :||||||||| aaccccauagaGUCCUAGCAUc 2 12 90 111 [hg19:1:27939314-27939335:-] 0.4857 151 7 -16.57 -0.1444 MIMAT0015020 hsa-miR-548v 2268 FGR accacguuuucAUUGACAUCGa |: ||||||| aggccccuacaUGCCUGUAGCc 2 12 239 260 [hg19:1:27939165-27939186:-] 0.5284 143 7 -11.71 -0.2119 MIMAT0015028 hsa-miR-3154 2268 FGR agACGAGGGUUGAGGGGAAGAc ||| ||:|:||||||| ggUGCCAAGAAUUUCCCUUCUa 2 21 385 406 [hg19:1:27939019-27939040:-] 0.5191 160 7 -20.15 -1.0838 MIMAT0015045 hsa-miR-3170 2268 FGR ugaCAGACAGAGUCUUGGGGUc | ||| ||:||||||||| ccaGGCUGGCUUAGAACCCCAu 2 20 76 97 [hg19:1:27939328-27939349:-] 0.4857 175 7 -26.50 -0.1996 MIMAT0015078 hsa-miR-3194 2268 FGR guCGGGAGGACCACCGACCGg |||| || ||||||| aaGCCC-CC---AGGCUGGCu 2 20 70 86 [hg19:1:27939339-27939355:-] 0.4983 141 7 -26.74 -0.1713 MIMAT0016847 hsa-miR-378c 2268 FGR gguGAGAAGACUGAGGUUCAGGUCa :|: ||| ||||: ||||||| ccuUUUAUCUCACUCU-AGUCCAGg 2 23 363 386 [hg19:1:27939039-27939062:-] 0.5364 168 7 -23.98 -0.4173 MIMAT0016856 hsa-miR-4303 2268 FGR gacaggaguCGAGUCUu ||||||| acccaaaguGCUCAGAc 2 9 278 294 [hg19:1:27939131-27939147:-] 0.5638 140 7 -12.46 -0.6456 MIMAT0016857 hsa-miR-4305 2268 FGR cuugaccuccACAGAUCc ||||||| gcucagaccuUGUCUAGu 2 9 287 304 [hg19:1:27939121-27939138:-] 0.5638 140 7 -8.80 -0.9256 MIMAT0016858 hsa-miR-4306 2268 FGR auGACGGA---AAGAGAGGu || ||| |||||||| acCUCCCUCACUUCUCUCCu 2 16 324 343 [hg19:1:27939082-27939101:-] 0.5588 150 7 -16.41 -0.9767 MIMAT0016881 hsa-miR-4260 2268 FGR acccUGAGGUACGGGGUUc :|||:: ||||||| auccGCUCUG-GCCCCAAg 2 16 198 215 [hg19:1:27939210-27939227:-] 0.5475 149 7 -21.26 -0.2559 MIMAT0016926 hsa-miR-4328 2268 FGR uuaggacccUUUUGACc ||||||| guuauuuauAAAACUGu 2 9 303 319 [hg19:1:27939106-27939122:-] 0.5638 140 7 -5.20 -1.0810 MIMAT0000062 hsa-let-7a 2268 FGR uuGAUA-UGUUG-GAUGAUG-GAGu |||| || :| :| |||| ||| ucCUAUCACUGCUUUCCUACUCUCc 2 21 340 364 [hg19:1:27939061-27939085:-] 0.5538 122 0 -13.79 -0.8544 MIMAT0000066 hsa-let-7e 2268 FGR uuGAUA-UGUUG-GAGGAUG-GAGu |||| || :| :|||||| ||| ucCUAUCACUGCUUUCCUACUCUCc 2 21 340 364 [hg19:1:27939061-27939085:-] 0.5538 130 0 -17.94 -0.8544 MIMAT0000066 hsa-let-7e 2268 FGR uugauauguuGGAGGAU-GGAGu |||:||| |||| caagaauuucCCUUCUACCCUCu 2 13 390 412 [hg19:1:27939013-27939035:-] 0.5191 120 0 -16.21 -0.7684 MIMAT0000067 hsa-let-7f 2268 FGR uuGAUA-UG-UUAGAUGAUG-GAGu |||| || : |:| |||| ||| ucCUAUCACUGCUUUCCUACUCUCc 2 21 340 364 [hg19:1:27939061-27939085:-] 0.5538 122 0 -11.87 -0.8509 MIMAT0000095 hsa-miR-96 2268 FGR ucguuuuuaCACGAUCACGGUUu || | :||||||| cucacucuaGUCCAGGUGCCAAg 2 15 371 393 [hg19:1:27939032-27939054:-] 0.5364 150 7 -14.49 -0.3511 MIMAT0000271 hsa-miR-214 2268 FGR ugACGGAC---AGACACGGACGACa || ||| | | ||||||| cuUGGCUGGACCCCUUUCCUGCUGg 2 21 451 475 [hg19:1:27938950-27938974:-] 0.5266 143 7 -19.05 -0.2063 MIMAT0000417 hsa-miR-15b 2268 FGR acAUUUGGUACUACA-CGACGAu | | | | || || |||||| caUCACCGAGGACGUGGCUGCUc 2 21 108 130 [hg19:1:27939295-27939317:-] 0.4857 124 6 -16.38 -0.1051 MIMAT0000431 hsa-miR-140-5p 2268 FGR gaUGGU--AUCCCAUUUUGG-UGAc |||| ||||| |||| ||| acACCACCUAGGG--CAACCUACUu 2 21 133 155 [hg19:1:27939270-27939292:-] 0.4646 120 0 -17.81 -0.1446 MIMAT0000455 hsa-miR-185 2268 FGR aguCCUUGACGGA---AAGAGAGGu | | || ||| |||||||| uauGUACCUCCCUCACUUCUCUCCu 2 20 319 343 [hg19:1:27939082-27939106:-] 0.5588 154 7 -16.41 -0.9767 MIMAT0004679 hsa-miR-296-3p 2268 FGR ccucucggagGUGGGUUGGGAg || :||||||| ccuguccgggCA-UCAACCCUc 2 13 1 21 [hg19:1:27939404-27939424:-] 0.5353 142 7 -22.07 -0.1401 MIMAT0000727 hsa-miR-374a 2268 FGR guGAAUAGUCCAACAU-AAUAUu |||:|| || || ||||| acCUUGUCUAGU--UAUUUAUAa 2 21 293 313 [hg19:1:27939112-27939132:-] 0.5638 121 0 -12.09 -0.9589 MIMAT0000732 hsa-miR-378 2268 FGR ggaAGACUGAGGUUCAGGUCa ||| ||||: ||||||| uuaUCUCACUCU-AGUCCAGg 2 19 367 386 [hg19:1:27939039-27939058:-] 0.5364 164 7 -21.55 -0.4173 MIMAT0004693 hsa-miR-330-5p 2268 FGR cggauUCUGUGUCCGGGUCUCu | | : |||||||||| ggggcAAAAGGAGGCCCAGAGc 2 18 167 188 [hg19:1:27939237-27939258:-] 0.5667 157 7 -26.95 -0.1194 MIMAT0004693 hsa-miR-330-5p 2268 FGR cggauuCUGUGUCCGGGUCUCu | || | ||||||| guccuuGCCA-AUCCCCAGAGc 2 17 39 59 [hg19:1:27939366-27939386:-] 0.5110 142 7 -18.19 -0.1508 MIMAT0000756 hsa-miR-326 2268 FGR gaccUCCUUCCCGGGUCUCc |||| ||||||||| caaaAGGA--GGCCCAGAGc 2 17 171 188 [hg19:1:27939237-27939254:-] 0.5667 157 7 -23.37 -0.1148 MIMAT0000756 hsa-miR-326 2268 FGR gaccuccuucccGGGUCUCc ||||||| uccuugccaaucCCCAGAGc 2 9 40 59 [hg19:1:27939366-27939385:-] 0.5110 140 7 -12.83 -0.1553 MIMAT0001339 hsa-miR-422a 2268 FGR cggaAGACUGGGAUUCAGGUCa ||| ||:|| ||||||| uuuaUCUCACUCU-AGUCCAGg 2 19 366 386 [hg19:1:27939039-27939059:-] 0.5364 164 7 -21.31 -0.4205 MIMAT0002807 hsa-miR-491-5p 2268 FGR ggaguaccuucccaAGGGGUGa ||||||| ccuuucucacuccaUCCCCACc 2 9 259 280 [hg19:1:27939145-27939166:-] 0.5461 140 7 -16.41 -0.4853 MIMAT0004801 hsa-miR-590-3p 2268 FGR ugaucgaaUAUGUAUUUUAau ||| :|||||| uucuguaaAUAAGUAAAAUga 3 14 580 600 [hg19:1:27938825-27938845:-] 0.5344 133 0 -3.71 -0.1019 MIMAT0005796 hsa-miR-1271 2268 FGR acucacGAAC-GAUCCACGGUUc || | | ||||||||| cucacuCUAGUCCAGGUGCCAAg 2 17 371 393 [hg19:1:27939032-27939054:-] 0.5364 155 7 -20.70 -0.3455

DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G021573 FGR Homo sapiens 2268 24371273

DNA & RNA Element - TargetScan Gene Name UTR Region Start UTR Region End AIR Total Normalized 3P-seq-tags & Pseudocounts Strand hg19_chromosome Genome Start Genome End FGR; SRC2 1 850 100 5.01 - chr1 27938574 27939424

DNA & RNA Element - RepTar Gene Name miRNA Begin End Profile FGR hsv1-miR-H7 beg:449 end:468 pic:3' GGAAACCAACGTCTGGGGAAA 5'& |||| ..||||||||| &5' ---TTGGC--TGGACCCCTTT 3' FGR hsv2-miR-H7-5p beg:449 end:468 pic:3' GGAAACCAATGCCTGGGGAAA 5'& |||| .|||||||||| &5' ---TTGGC--TGGACCCCTTT 3' FGR hsa-miR-624 beg:281 end:300 pic:3' TCCATTATGGTTATGGAACAC 5'& |.|.|. ||||||| &5' ----AGTGCTCAGACCTTGT- 3' FGR hsa-miR-302b beg:523 end:541 pic:3' GATGATTTTGTACC-----TTCGTGAAT 5'& || .||||||| &5' ------------GGTTGCAGAGCACTT- 3' FGR hsa-miR-302d beg:523 end:541 pic:3' TGTGAGTTTGTACC-----TTCGTGAAT 5'& || .||||||| &5' ------------GGTTGCAGAGCACTT- 3' FGR hsa-miR-302e beg:527 end:541 pic:3' TTCGTACCTTCGTGAAT 5'& ||| .||||||| &5' --GCA---GAGCACTT- 3' FGR hsa-miR-378 beg:367 end:386 pic:3' GGAAGACTGAGGTTCAGGTCA 5'& ||| ||||. ||||||| &5' ---TCTCACTCT-AGTCCAG- 3' FGR hsa-miR-422a beg:367 end:386 pic:3' CGGAAGACTGGGATTCAGGTCA 5'& ||| ||.|| ||||||| &5' ----TCTCACTCT-AGTCCAG- 3' FGR hsa-miR-3117 beg:96 end:107 pic:3' GACCGTGATATACTCAGGATA 5'& |||||||| &5' ------------GAGTCCTA- 3' FGR bkv-miR-B1-5p beg:276 end:294 pic:3' TACGAGAAGGG-TTCA-GAGTCTA 5'& ||| |||| |||||| &5' --------CCCAAAGTGCTCAGA- 3' FGR hsa-miR-296-3p beg:5 end:22 pic:3' CCTCTCGGAGGTGGGTTGGGAG 5'& |.|| .|||||||| &5' ---GGGCA-----TCAACCCTC 3' FGR hsa-miR-3169 beg:26 end:44 pic:3' GATACACGGTTCGTGTCAGGAT 5'& .|| |||| | ||||||| &5' --GTG-GCCA--C-CAGTCCT- 3' FGR kshv-miR-K12-10astar beg:205 end:217 pic:3' TCACCACCATAGCGGGGTTCGG 5'& ||||||||| &5' ------------GCCCCAAGC- 3' FGR hsa-miR-326 beg:49 end:59 pic:3' GACCTCCTTCCCGGGTCTCC 5'& ||||||| &5' ------------CCCAGAG- 3' FGR hsa-miR-661 beg:64 end:82 pic:3' TGCGCGTCCGGTCTCT-GGGTCCGT 5'& ||| || ||||||| &5' ---------CCAAAGCCCCCAGGC- 3' FGR hsa-miR-92a-2star beg:269 end:282 pic:3' CATTACGTTGTTTAGGGGTGGG 5'& |||||||||| &5' ------------ATCCCCACCC 3' FGR hsa-miR-1321 beg:316 end:332 pic:3' TAGTGTAAGTGGAGGGAC 5'& .|| .|||||||| &5' ----TATGTACCTCCCT- 3' FGR hsa-miR-1255a beg:184 end:202 pic:3' TTAGATGAA-AGAAACGAGTAGGA 5'& .|| ||| ||||||| &5' -----GCTGATCT---CTCATCC- 3' FGR hsa-miR-1255b beg:184 end:202 pic:3' TTGGTGAA-AGAAACGAGTAGGC 5'& .|| ||| |||||||| &5' ----GCTGATCT---CTCATCCG 3' FGR hsa-miR-600 beg:413 end:433 pic:3' CTCGTTCCGAGA--ACAGACATTCA 5'& |||| ||||||||||| &5' --------CTCTTGTGTCTGTAAGT 3' FGR hsa-miR-548v beg:247 end:260 pic:3' ACCACGTTTTCATTGACATCGA 5'& ||| ||||||| &5' ---TGC--------CTGTAGC- 3' FGR ebv-miR-BART13 beg:416 end:437 pic:3' AGTCGGCAGGGACCGTTCAATGT 5'& ..|| .|| |.|||||||| &5' ----TTGTGTCT-GTAAGTTACA 3' FGR ebv-miR-BART5star beg:164 end:185 pic:3' TCCACTTG-TCGCCGGGTG 5'& .|| .| |||||| &5' GGGGCAAAAGGAGGCCCA- 3' FGR ebv-miR-BART7star beg:473 end:495 pic:3' ACAAAGTATCA--GTT-CCAGGTCC 5'& .|.| ||. |||||||| &5' ------GTGGATGCAGTGGTCCAGG 3' FGR hsa-miR-4260 beg:199 end:216 pic:3' ACCCTGAGGTACGGGGTTC 5'& .|||.. |||||||| &5' ----GCTCTG-GCCCCAAG 3' FGR hsa-miR-4303 beg:276 end:294 pic:3' GACAGGAGT----CGAGTCTT 5'& || || ||||||| &5' ----CC-CAAAGTGCTCAGA- 3' FGR hsa-miR-3194 beg:68 end:87 pic:3' GTCGGGAGGACCACCGACCGG 5'& ||||| || |||||||. &5' -AGCCC-CCA---GGCTGGCT 3' FGR hsa-miR-1271 beg:377 end:394 pic:3' ACTCACGAACGA-TCCACGGTTC 5'& |. |||||||||| &5' ---------GTCCAGGTGCCAAG 3' FGR hsa-miR-371-5p beg:504 end:520 pic:3' TCACGGGGGTGTCAAACTCA 5'& |||| .||||||| &5' ---GCCCA---GGTTTGAG- 3' FGR hcmv-miR-UL70-3p beg:255 end:278 pic:3' GGCGCGC--GGTCGGGTAGGGG 5'& || .|| |||||||| &5' --GCCTTTCTCACTCCATCCCC 3' FGR hcmv-miR-US25-2-5p beg:131 end:151 pic:3' AGTAGGTGGA-CTTGTCTGGCGA 5'& || |||||| |..|| ||| &5' -CA-CCACCTAGGGCA-ACC--- 3' FGR hiv1-miR-H1 beg:2 end:27 pic:3' CGGGTCCGTGC---GGAGGGACC 5'& |.||.||||. ||||.|||| &5' GTCCGGGCATCAACCCTCTCTGG 3' FGR hsa-miR-1182 beg:276 end:298 pic:3' CAGTGTAGGGA-----GGGTTCTGGGAG 5'& ||| |.| |||||.| &5' -------CCCAAAGTGCTC-AGACCTT- 3' FGR hsa-miR-1182 beg:266 end:291 pic:3' CAGTGTAGGGA-GGGTTCTGGGAG 5'& || |||||| ||||| . ||| &5' -TC-CATCCCCACCCAAAGTGCTC 3' FGR hsa-miR-1203 beg:192 end:209 pic:3' CTCGACGTAGGACCGAGGCCC 5'& || ||||| ||||.|| &5' ---CT-CATCC--GCTCTGG- 3' FGR hsa-miR-122 beg:255 end:273 pic:3' GTTTGTGGTAACAGTGTGAGGT 5'& .|| || ||||||| &5' -----GCCTT--TCTCACTCCA 3' FGR hsa-miR-122 beg:358 end:380 pic:3' GTTTGTGGT-AACAGTGTGAGGT 5'& | || || || |||||.| &5' ----CTCCTTTTATCTCACTCTA 3' FGR hsa-miR-1225-5p beg:270 end:292 pic:3' GGGGGGTGACCCGGCATGGGTG 5'& .|||||| ||.|.|| &5' -TCCCCACCCAAA-GTGCTCA- 3' FGR hsa-miR-1234 beg:74 end:85 pic:3' CACCCCACCCACCAGTCCGGCT 5'& |||||.|. &5' --------------CAGGCTGG 3' FGR hsa-miR-1238 beg:507 end:524 pic:3' CCCCGTCTGTCT--GCTCCTTC 5'& |||. .||||.|| &5' --------CAGGTTTGAGGGAG 3' FGR hsa-miR-1248 beg:510 end:529 pic:3' AAATCGTGTCACGAATATGTTCTTCCA 5'& || |.||. . .||||||| &5' --------AG-GTTTGAGGGAGAAGGT 3' FGR hsa-miR-1258 beg:91 end:109 pic:3' AAGGTGCTGGATTAGGATTGA 5'& |||. |.|||||.| &5' --CCATAG---AGTCCTAGC- 3' FGR hsa-miR-1262 beg:257 end:283 pic:3' TAGGAAGA-TGTTTAA---GTGGGTA 5'& |.|||| || |||||| &5' --CTTTCTCACTCCATCCCCACCCA- 3' FGR hsa-miR-1263 beg:375 end:392 pic:3' TGAGTCATACGGTCCCATGGTA 5'& .||| ||| |||.||| &5' ---TAGT---CCA-GGTGCCA- 3' FGR hsa-miR-1268 beg:271 end:291 pic:3' GGGGGTGGTGG--TGCGGGC 5'& ||||||| | ..||.| &5' -CCCCACC-CAAAGTGCTC- 3' FGR hsa-miR-1270 beg:219 end:236 pic:3' TGTGTCGAGAAGGTATAGAGGTC 5'& .|||||| |.|||| &5' ------TTCTTCCT--TTTCCA- 3' FGR hsa-miR-1275 beg:319 end:335 pic:3' CTGTCGGAGAGGGGGTG 5'& |. |||||.||| &5' ----GTACCTCCCTCAC 3' FGR hsa-miR-1293 beg:265 end:283 pic:3' CGTGTTTAGAGGTCT-GGTGGGT 5'& ||||| ||||||| &5' --------CTCCATCCCCACCCA 3' FGR hsa-miR-1299 beg:477 end:494 pic:3' AGGGAGTGTGTCTTAAGGTCTT 5'& |..||| |||||.| &5' ------ATGCAGTGGTCCAGGA 3' FGR hsa-miR-1306 beg:131 end:150 pic:3' GTGGTGG-TCTCGGTTGCA 5'& ||||||| ||.| |||| &5' CACCACCTAGGG-CAAC-- 3' FGR hsa-miR-134 beg:418 end:437 pic:3' GGGGAGAC-CAGTTGGTCAGTGT 5'& .|| ||| |||.||| &5' -----TTGTGTCTGTAAGTTACA 3' FGR hsa-miR-135astar beg:200 end:222 pic:3' GCGGTGCCGAGGTTAGGGATAT 5'& |||. .||| |||| |||| &5' CGCTCTGGCCCCAAGCACTAT- 3' FGR hsa-miR-143 beg:353 end:375 pic:3' CTCGATGTCAC-GAAGTAGAGT 5'& |||| .||.|||||| &5' ---CTACTCTCCTTTTATCTCA 3' FGR hsa-miR-146b-3p beg:487 end:509 pic:3' GGTCTTGACTCAGGTGTCCCGT 5'& ||||.||||.| | |||| &5' CCAGGACTGGGGTCT--GGGC- 3' FGR hsa-miR-148bstar beg:478 end:498 pic:3' CGGAC-TCACATATTGTCTTGAA 5'& || |||| |||.||| &5' ---TGCAGTGGTC--CAGGACT- 3' FGR hsa-miR-182 beg:32 end:50 pic:3' TCACACTCAAGATGGT----AACGGTTT 5'& |||| ||||||| &5' ------------ACCAGTCCTTGCCAA- 3' FGR hsa-miR-182star beg:76 end:94 pic:3' ATCAACCGTTCAGATCTTGGT 5'& ||| .| ||||||| &5' -----GGCTGGCTTAGAACC- 3' FGR hsa-miR-185 beg:212 end:228 pic:3' AGTCCTTGACG-GAAAGAGAGGT 5'& || || |.|||.| &5' ---------GCACTATTTCTTC- 3' FGR hsa-miR-1909 beg:455 end:473 pic:3' GCCACTCGTGGGCCGGGGACGC 5'& | |||| ..||||| &5' ------GGACCCCTTTCCTGC- 3' FGR hsa-miR-1910 beg:479 end:499 pic:3' TCCGCCGTCCGTGTCCTGACC 5'& || |. || ||||||||| &5' --GCAGT-GGTCCAGGACTGG 3' FGR hsa-miR-198 beg:490 end:510 pic:3' CTTGGATAGAGGGGAGACCTGG 5'& |.||. |||||.|| &5' GGACTGGGG-----TCTGGGCC 3' FGR hsa-miR-202 beg:314 end:329 pic:3' AAGGGTACGGGATATGGAGA 5'& ||. |.|||||| &5' ------TGTA-TGTACCTC- 3' FGR hsa-miR-20astar beg:467 end:487 pic:3' GAAATTCACGAGTA--TTACGTCA 5'& |||| . .||||||| &5' -------TGCTGGGTGGATGCAGT 3' FGR hsa-miR-2110 beg:261 end:279 pic:3' GTGAGTCGCCGGCAAAGGGGTT 5'& |||| || |||||| &5' --CTCACT--CCA--TCCCCA- 3' FGR hsa-miR-214 beg:452 end:475 pic:3' TGACGGACAGACAC---GGACGACA 5'& || ||| ||||||| &5' --TGGCTGGACCCCTTTCCTGCTG- 3' FGR hsa-miR-217 beg:466 end:488 pic:3' AGGTT-AGTCAAGGACTACGTCAT 5'& ||| | .|| ||||||||. &5' TCCTGCTGGGTG---GATGCAGTG 3' FGR hsa-miR-218-1star beg:117 end:139 pic:3' GGTACC-ACGA-ACTGCCTTGGTA 5'& |.||| |||| |||| |||| &5' -CGTGGCTGCTCTGAC---ACCA- 3' FGR hsa-miR-224 beg:22 end:46 pic:3' TTGCC-TTGGTGATCACTGAAC 5'& ..||| ..|||| ||| |||| &5' GGCGGTGGCCACCAGTC-CTTG 3' FGR hsa-miR-2278 beg:343 end:356 pic:3' GGTCCGTTGTGTGTGACGAGAG 5'& |||||||.|| &5' ------------CACTGCTTTC 3' FGR hsa-miR-2278 beg:111 end:132 pic:3' GG-TCCGTTGTGTGTGACGAGAG 5'& || ||| ||. .||||||| &5' CCGAGG--ACGTG-GCTGCTCT- 3' FGR hsa-miR-28-3p beg:284 end:305 pic:3' AGGTCCTCGAGTGT----TAGATCAC 5'& ||||| | .|||||| &5' -------GCTCAGACCTTGTCTAGT- 3' FGR hsa-miR-2909 beg:111 end:135 pic:3' GGTTCTCTACAAC--CGGGATTG 5'& ||.|| || || ||.||.|| &5' CCGAG-GACGTGGCTGCTCTGAC 3' FGR hsa-miR-302astar beg:498 end:520 pic:3' TCGTTCATGTAGGTGCAAATTCA 5'& .|. | | ||| ||||.|| &5' GGTCTGGGC--CCAGGTTTGAG- 3' FGR hsa-miR-302c beg:520 end:541 pic:3' GGTGACTTTGTACC-TTCGTGAAT 5'& |||. || .||||||| &5' -----GAAGGTTGCAGAGCACTT- 3' FGR hsa-miR-3115 beg:77 end:99 pic:3' TGGTTGATCATTTGGGTATA 5'& .| .|| || |||||| &5' GCTGGCTTAGAACCCCATA- 3' FGR hsa-miR-3119 beg:432 end:452 pic:3' CGGTAGTTTCAA---TTTTCGGT 5'& |||||| |||||.| &5' -----CAAAGTCAGGAAAAGTC- 3' FGR hsa-miR-3119 beg:420 end:443 pic:3' CGGTAGT--TTCAAT-TTTCGGT 5'& .|| |||||| ||||.|| &5' ---GTCTGTAAGTTACAAAGTCA 3' FGR hsa-miR-3121 beg:291 end:311 pic:3' ACAGGAAACGGATGAGATAAAT 5'& || |||.||| .|||||| &5' ---CC-TTGTCTAG-TTATTTA 3' FGR hsa-miR-3125 beg:215 end:232 pic:3' AGAGAGGTGTCGAAGGAGAT 5'& |.|. ||||||.| &5' -----CTATTTCTTCCTTT- 3' FGR hsa-miR-3126-5p beg:313 end:334 pic:3' ACGAAGACCGTAGAC--AGGGAGT 5'& || |.|| | ||||||| &5' -----CT-GTATGTACCTCCCTCA 3' FGR hsa-miR-3127 beg:221 end:245 pic:3' GAAGGGTAAGGTG--TTCGGGACTA 5'& |||||. |||||| |.|||| &5' CTTCCTTTTCCACTTAGGCCC---- 3' FGR hsa-miR-3127 beg:535 end:554 pic:3' GAAGGGTAAGGTGTTCGGGACTA 5'& ||||||| || |.|||| &5' CTTCCCA--CCT----CTCTGA- 3' FGR hsa-miR-3131 beg:22 end:46 pic:3' TTCCGGGAA-GGTGGTCAGGAGCT 5'& ||| |||||||||||.| &5' --GGCGGTGGCCACCAGTCCTTG- 3' FGR hsa-miR-3136 beg:141 end:165 pic:3' TTACTG--GGATGGATAAGTCAGTC 5'& |.| |||||.|.||. ||| &5' ---GGCAACCTACTTGTTTTA-CAG 3' FGR hsa-miR-3146 beg:91 end:111 pic:3' GGTAAGAAAGATAGGATCGTAC 5'& |||| .||||||||| &5' CCATAGA----GTCCTAGCAT- 3' FGR hsa-miR-3150 beg:257 end:279 pic:3' GGTTGGAGCTCCTAGAGGGGTC 5'& || .||| |||||| &5' CCTTTCTCACTCCA-TCCCCA- 3' FGR hsa-miR-3153 beg:215 end:235 pic:3' TTTACAGGGATGAGC---GAAAGGGG 5'& |||.|. ||||.|| &5' --------CTATTTCTTCCTTTTCC- 3' FGR hsa-miR-3154 beg:383 end:406 pic:3' AGACGAGGGT---TGAGGGGAAGAC 5'& | | ||| |.|.||||||| &5' ---GGTGCCAAGAATTTCCCTTCT- 3' FGR hsa-miR-3164 beg:415 end:437 pic:3' GCGGTAAAGGGAAT-------TTCAGTGT 5'& |.|||. ||||.||| &5' --------CTCTTGTGTCTGTAAGTTACA 3' FGR hsa-miR-3170 beg:76 end:97 pic:3' TGACAGACAGAGTCTTGGGGTC 5'& | ||| ||.||||||||| &5' ---GGCTGGCTTAGAACCCCA- 3' FGR hsa-miR-3172 beg:76 end:97 pic:3' ATTCCTGAC---GTTTTGGGGT 5'& |.||| .|.||||||| &5' ----GGCTGGCTTAGAACCCCA 3' FGR hsa-miR-3173 beg:212 end:232 pic:3' ACCGGACG-GATAAAGGAGGAAA 5'& || |||||||.|||||| &5' ------GCACTATTTCTTCCTTT 3' FGR hsa-miR-3173 beg:347 end:368 pic:3' ACCGGACGGATAAAGGAGGAAA 5'& ||.| |||| .||||||| &5' --GCTTTCCTAC--TCTCCTTT 3' FGR hsa-miR-3179 beg:390 end:406 pic:3' TGCAAATTTAAAGTGGGGAAGA 5'& .|||| .||||||| &5' ------GAATT---TCCCTTCT 3' FGR hsa-miR-3179 beg:457 end:468 pic:3' TGCAAATTTAAAGTGGGGAAGA 5'& |||||||. &5' -------------ACCCCTTT- 3' FGR hsa-miR-3196 beg:236 end:255 pic:3' CTCCGGGGACG-GCGGGGC 5'& |||||||| .|||. &5' -AGGCCCCTACATGCCT-- 3' FGR hsa-miR-3202 beg:210 end:236 pic:3' TAATTTCG------AGAAGAGGGAAGGT 5'& |||| ||||| |..||||| &5' ----AAGCACTATTTCTTC-CTTTTCCA 3' FGR hsa-miR-3202 beg:393 end:407 pic:3' TAATTTCGAGAAGAGGGAAGGT 5'& |.|||||||.| &5' -----------TTTCCCTTCTA 3' FGR hsa-miR-323b-5p beg:121 end:152 pic:3' ACGCTTGAG----TGGTG---CCTGTTGGA 5'& || .||| ||||| ||.|||||| &5' -GCT-GCTCTGACACCACCTAGGGCAACCT 3' FGR hsa-miR-325 beg:452 end:477 pic:3' TGTGAATGACCTGT-----GGATGATCC 5'& .|||||| |||.||.|| &5' ------GCTGGACCCCTTTCCTGCTGGG 3' FGR hsa-miR-326 beg:166 end:188 pic:3' GACCTCC---TTC-CCGGGTCTCC 5'& ||.| |.| ||||||||| &5' --GGGGCAAAAGGAGGCCCAGAG- 3' FGR hsa-miR-330-5p beg:38 end:59 pic:3' CGGATTCTGTGTCC-GGGTCTCT 5'& ||| .| || ||||||| &5' -CCTT--GC-CAATCCCCAGAG- 3' FGR hsa-miR-330-5p beg:165 end:187 pic:3' CGGATTCTGTG----TCCGGGTCTCT 5'& |..|.|| |||||||||| &5' ---TGGGGCAAAAGGAGGCCCAGAG- 3' FGR hsa-miR-331-5p beg:237 end:256 pic:3' CCTAGGGACCCTGGTATGGATC 5'& | |||| |||.|||. &5' -GGCCCCTA----CATGCCTG- 3' FGR hsa-miR-34bstar beg:335 end:354 pic:3' GTTAGTCGATTACTGTGACGGAT 5'& || ||| ||||||.| &5' ---TCTCCTAT---CACTGCTT- 3' FGR hsa-miR-34c-5p beg:335 end:354 pic:3' CGTTAGTCGATTGATGTGACGGA 5'& || ||| ||||||.| &5' ----TCTCCTAT---CACTGCTT 3' FGR hsa-miR-373 beg:521 end:542 pic:3' TGTGGGGTTTTAGC--TTCGTGAAG 5'& ||..|.| .|||||||| &5' -------AAGGTTGCAGAGCACTTC 3' FGR hsa-miR-374bstar beg:454 end:477 pic:3' TTACTATTATGTTGGACGATTC 5'& ||. ||||||..| &5' --TGGACCCCTTTCCTGCTGGG 3' FGR hsa-miR-378 beg:476 end:494 pic:3' GGAAGACTGAGGT-TCAGGTCA 5'& ||. | .|||||| &5' ------GATGCAGTGGTCCAG- 3' FGR hsa-miR-378c beg:476 end:494 pic:3' GGTGAGAAGACTGAGGT-TCAGGTCA 5'& ||. | .|||||| &5' ----------GATGCAGTGGTCCAG- 3' FGR hsa-miR-378c beg:367 end:386 pic:3' GGTGAGAAGACTGAGGTTCAGGTCA 5'& ||| ||||. ||||||| &5' -------TCTCACTCT-AGTCCAG- 3' FGR hsa-miR-422a beg:476 end:494 pic:3' CGGAAGACTGGGAT-TCAGGTCA 5'& ||. | .|||||| &5' -------GATGCAGTGGTCCAG- 3' FGR hsa-miR-4252 beg:472 end:490 pic:3' ACCACGACTGAGTCACCGG 5'& |||| ||. ||||||.| &5' -GGTG--GATGCAGTGGTC 3' FGR hsa-miR-4253 beg:238 end:255 pic:3' TGGGGGACCTGTACGGGA 5'& .||||. |||||||. &5' GCCCCT---ACATGCCT- 3' FGR hsa-miR-4254 beg:474 end:495 pic:3' CTCTACC-ACCTCATCGAGGTCCG 5'& |.||| || |||.| |||||| &5' --GGTGGATGCAGTGG-TCCAGG- 3' FGR hsa-miR-4257 beg:265 end:282 pic:3' GAGTCAGGGGTGGAGACC 5'& ||| |||||||| | &5' CTCCATCCCCACC-C--- 3' FGR hsa-miR-4263 beg:69 end:92 pic:3' CCGGT--TCCG--TGAATCTTA 5'& ||| |||| .||||||| &5' -GCCCCCAGGCTGGCTTAGAA- 3' FGR hsa-miR-4265 beg:178 end:199 pic:3' GGGTCTCGACTCGGGTGTC 5'& ||||||||||| |.| || &5' CCCAGAGCTGATCTCTCA- 3' FGR hsa-miR-4277 beg:51 end:63 pic:3' CACATGACACGAGTCTTGACG 5'& ||||.|||. &5' ------------CAGAGCTGT 3' FGR hsa-miR-4277 beg:556 end:579 pic:3' CACATGACACGAGTCT-TGACG 5'& ||||| ||||.| . |.|| &5' GTGTA-TGTGTTGGTTTATTG- 3' FGR hsa-miR-4277 beg:478 end:499 pic:3' CACATGACACGA-GTCTTGACG 5'& |.| ||| | |||.|||| &5' ---TGCAGTGGTCCAGGACTG- 3' FGR hsa-miR-4280 beg:77 end:98 pic:3' CGAGACGAGTCTTGATGTGAG 5'& ||| |||.||||| ||. &5' GCTG-GCTTAGAACCCCAT-- 3' FGR hsa-miR-4287 beg:504 end:525 pic:3' TTTCACGGG----AGTTCCCTCT 5'& |||| | ||||||| &5' -----GCCCAGGTTTGAGGGAGA 3' FGR hsa-miR-4290 beg:514 end:533 pic:3' CTCCCTTCTTTCCTCCCGT 5'& |||||| .|||| ||| &5' GAGGGA--GAAGGTT-GCA 3' FGR hsa-miR-4291 beg:452 end:477 pic:3' TCGAC-------AAGGACGACTT 5'& .|||| |||||||||.. &5' GGCTGGACCCCTTTCCTGCTGGG 3' FGR hsa-miR-4292 beg:72 end:90 pic:3' GGTTCCGGCCGGGTCCCC 5'& || ||||.|||..|| &5' CCCAGGCTGGCTTAG--- 3' FGR hsa-miR-4292 beg:493 end:514 pic:3' GGTTCCGG--CCGGGTCCCC 5'& | .||.| |||||||| &5' CTGGGGTCTGGGCCCAGG-- 3' FGR hsa-miR-4298 beg:212 end:236 pic:3' GACG-GA-GGAGGAGGACAGGGTC 5'& || || ..||.|||| |.||| &5' --GCACTATTTCTTCCTTTTCCA- 3' FGR hsa-miR-4299 beg:121 end:139 pic:3' CGGAGAGTACAGTGGTCG 5'& ||. ||| || ||||| &5' GCTGCTC-TGACACCA-- 3' FGR hsa-miR-4305 beg:490 end:508 pic:3' CTTGACCTCCACAGATCC 5'& |.|||||. ||||.|| &5' GGACTGGG---GTCTGGG 3' FGR hsa-miR-4306 beg:323 end:343 pic:3' ATGACGGA---AAGAGAGGT 5'& || ||| |||||||| &5' --CTCCCTCACTTCTCTCC- 3' FGR hsa-miR-4306 beg:212 end:228 pic:3' ATGACG-GAAAGAGAGGT 5'& || || |.|||.| &5' ----GCACTATTTCTTC- 3' FGR hsa-miR-4309 beg:256 end:273 pic:3' ACCTTAGGATC---TGAGGTC 5'& ||| |||||| &5' ------CCTTTCTCACTCCA- 3' FGR hsa-miR-452star beg:148 end:168 pic:3' GTGAATGAAGAAAC-GTCTACTC 5'& ||||| ||| ||||||.| &5' ----TACTTGTTTTACAGATGGG 3' FGR hsa-miR-486-3p beg:110 end:133 pic:3' TAGGACA-TGACTCGACGGGGC 5'& || || .|||||.|.| &5' --CCGAGGACGTGGCTGCTCTG 3' FGR hsa-miR-491-5p beg:256 end:280 pic:3' GGAGTACCTTCCCAAGGGGTGA 5'& |||. ||||||| &5' CCTTTCTCACTCCATCCCCAC- 3' FGR hsa-miR-498 beg:440 end:461 pic:3' CTTTTTGCGGGGGACCGAACTTT 5'& |.|||| |.|. ||||| || &5' GGAAAA-GTCT--TGGCTGGA-- 3' FGR hsa-miR-498 beg:504 end:521 pic:3' CTTTTTGCGGGGGACCGAACTTT 5'& |||| ||.||||.. &5' -------GCCCA--GGTTTGAGG 3' FGR hsa-miR-500b beg:504 end:523 pic:3' TGGGTCCATCGTTCCTAA 5'& .||||||| |.||| &5' GCCCAGGTTTGAGGGA-- 3' FGR hsa-miR-500b beg:378 end:394 pic:3' TGGGTCCATCGTTCCTAA 5'& .||||||. |||| &5' -TCCAGGTGCCAAG---- 3' FGR hsa-miR-502-5p beg:68 end:91 pic:3' ATCGTGGGTCT-ATCGTTCCTA 5'& ||| |||||. |.|| || &5' -AGCCCCCAGGCTGGCTTAGA- 3' FGR hsa-miR-512-5p beg:459 end:479 pic:3' CTTTCACGGGAGTTC-CGACTCAC 5'& ||||. ||||.||| &5' -------CCCTTTCCTGCTGGGTG 3' FGR hsa-miR-516a-3p beg:541 end:564 pic:3' TGG-GAGACTTTCCTT-CGT 5'& ||| ||||||| | |.| &5' ACCTCTCTGAATAGTGTGTA 3' FGR hsa-miR-516bstar beg:541 end:564 pic:3' TGG-GAGACTTTCCTT-CGT 5'& ||| ||||||| | |.| &5' ACCTCTCTGAATAGTGTGTA 3' FGR hsa-miR-520a-3p beg:520 end:541 pic:3' TGTCAGGTTTCCC----TTCGTGAAA 5'& .|||| .||||||| &5' -------GAAGGTTGCAGAGCACTT- 3' FGR hsa-miR-520f beg:200 end:220 pic:3' TTGGGAGATTTTCCTTCGTGAA 5'& | ||||.. ||||||| &5' --CGCTCTGGCCCCAAGCACT- 3' FGR hsa-miR-539 beg:205 end:228 pic:3' TGTGTGGTTCCTATTAAAGAGG 5'& .| ||||| ||||||.| &5' --GCCCCAAGCACTATTTCTTC 3' FGR hsa-miR-544 beg:518 end:536 pic:3' CTTGAACGATTTTTACGTCTTA 5'& | ||.. ||||||. &5' ------GAGAAGGTTGCAGAG- 3' FGR hsa-miR-554 beg:479 end:499 pic:3' TGACCGAC-TCA-GTCCTGATCG 5'& || .|| |||||||.| &5' ----GCAGTGGTCCAGGACTGG- 3' FGR hsa-miR-575 beg:69 end:88 pic:3' CGAGGACAGGT-TGACCGAG 5'& || || ||| .||||||. &5' GC-CC---CCAGGCTGGCTT 3' FGR hsa-miR-582-3p beg:286 end:307 pic:3' CCAAGTC---AACAAGTTGGTCAAT 5'& |||| |||| |.||||| &5' ---TCAGACCTTGT----CTAGTTA 3' FGR hsa-miR-584 beg:607 end:622 pic:3' GAGTCAGGGTCCGTTTGGTATT 5'& |||. ||||||||.| &5' -----TCCT---CAAACCATGA 3' FGR hsa-miR-588 beg:19 end:36 pic:3' CAAGATTGGGTAACACCGGTT 5'& |||..| ||||||| &5' --TCTGGCG----GTGGCCA- 3' FGR hsa-miR-601 beg:453 end:463 pic:3' GAGGAGGTTGTTAGGATCTGGT 5'& ||.|||| &5' --------------CTGGACC- 3' FGR hsa-miR-619 beg:370 end:388 pic:3' TGACCCGTGTTTGTACAGGTCCAG 5'& ||| | |||||||| &5' ------CACT--CTAGTCCAGGT- 3' FGR hsa-miR-620 beg:215 end:236 pic:3' TAAAGATATAGAT---AGAGGTA 5'& |||| ||| |.|||| &5' ----CTATTTCTTCCTTTTCCA- 3' FGR hsa-miR-622 beg:62 end:84 pic:3' CGAGGT--TGGAGTCGTCTGACA 5'& .|||| .|| | |||.||| &5' -TTCCAAAGCC-CC-CAGGCTG- 3' FGR hsa-miR-629star beg:504 end:526 pic:3' CGACCCGAATGCAA---CCCTCTTG 5'& |||| | ||| ||||||| &5' ---GGGCCCAGGTTTGAGGGAGAA- 3' FGR hsa-miR-631 beg:493 end:517 pic:3' CGACTCCAGACCC-GGTCCAGA 5'& |||.|||||||| ||||||.| &5' -CTGGGGTCTGGGCCCAGGTTT 3' FGR hsa-miR-635 beg:496 end:515 pic:3' CCTGTAACAAAGTCACGGGTTCA 5'& | || |||||.|| &5' -------GGGTCTGGGCCCAGGT 3' FGR hsa-miR-635 beg:471 end:495 pic:3' CCTGTAACAAAGTCA-CGGGTTCA 5'& || . |||| |.|||.| &5' GGGTGGATG--CAGTGGTCCAGG- 3' FGR hsa-miR-637 beg:58 end:80 pic:3' TGCGTCTCGGGCTTTCGGGGGTCA 5'& |. .|| ||||||||||| &5' --GTTCT-TCC-AAAGCCCCCAG- 3' FGR hsa-miR-642 beg:502 end:523 pic:3' GTTCTGTGTAAACCT--CTCCCTG 5'& .|.| || || |||||| &5' --GGGCCCA---GGTTTGAGGGA- 3' FGR hsa-miR-648 beg:32 end:49 pic:3' TGGTCACGGGACGTGTGAA 5'& |||||| ||.||| || &5' ACCAGT-CCTTGC-CA--- 3' FGR hsa-miR-671-3p beg:472 end:501 pic:3' CCACCT-CGGGAC----TCTTGGCCT 5'& |||||| || || ||.||.||. &5' GGTGGATGCAGTGGTCCAGGACTGGG 3' FGR hsa-miR-7 beg:51 end:70 pic:3' TGTTGTTTTAGTGATCAGAAGGT 5'& ||.| .||. ||||||| &5' ----CAGA---GCTGTTCTTCCA 3' FGR hsa-miR-759 beg:198 end:208 pic:3' CAGTTTTAACAAACGTGAGACG 5'& |.||||| &5' --------------CGCTCTG- 3' FGR hsa-miR-760 beg:173 end:191 pic:3' AGGGGTGTCTGGGTCTCGGC 5'& . ||.||||||||.| &5' -----GGAGGCCCAGAGCTG 3' FGR hsa-miR-760 beg:37 end:62 pic:3' AGGGGTGTCT--GGGTCTCGGC 5'& |||. | ||||||||.| &5' TCCTTGCCAATCCCCAGAGCTG 3' FGR hsa-miR-765 beg:220 end:235 pic:3' GTAGTGGAAGGAAGAGGAGGT 5'& .|||||||.||| &5' -----TCTTCCTTTTCC---- 3' FGR hsa-miR-891b beg:512 end:532 pic:3' AGTTACTGAGTCCA---TTCAACGT 5'& | .| ||| |.|||||| &5' -----GTTTGAGGGAGAAGGTTGCA 3' FGR hsa-miR-920 beg:344 end:365 pic:3' ATGACGAAGGTGTCGAGGGG 5'& |||||||.| | |||.|| &5' -ACTGCTTTC-CTACTCTCC 3' FGR hsa-miR-920 beg:55 end:78 pic:3' ATGAC--GAAGGTGTCGAGGGG 5'& .||| |||||| ||| |||| &5' -GCTGTTCTTCCAAAGC-CCCC 3' FGR hsa-miR-92a-2star beg:526 end:548 pic:3' CATTACGTTGTTT-AGGGGTGGG 5'& ||||. |.||||||. &5' ----TGCAGAGCACTTCCCACCT 3' FGR hsa-miR-936 beg:313 end:336 pic:3' GACGC-TAAGGAGGGAGATGACA 5'& |||. .| |||||||| ||| &5' CTGTATGTACCTCCCTC-ACT-- 3' FGR hsa-miR-939 beg:69 end:97 pic:3' GTGGGGGTCT--CGGAGTCGAGGGGT 5'& .|||||||. | ||.|| ||||| &5' -GCCCCCAGGCTGGCTTAGAACCCCA 3' FGR hsv1-miR-H1 beg:345 end:372 pic:3' AGGTGAAGGGC----AGGAAGGTAG 5'& | |||.|| |||||..||| &5' -CTGCTTTCCTACTCTCCTTTTATC 3' FGR hsv1-miR-H2 beg:69 end:90 pic:3' TCAGCGTGAGCAGGGACCGAGTCC 5'& || | | ||||||.|| &5' ----GC-CCCCAGGCTGGCTTAG- 3' FGR hsv1-miR-H5-3p beg:544 end:554 pic:3' GGCCTCCCAAACCTAGAGACTG 5'& ||||||| &5' --------------TCTCTGA- 3' FGR hsv2-miR-H10 beg:271 end:291 pic:3' GGCGGGTGGGGG-CGTGGG 5'& | ||||||| | |.| &5' -C-CCCACCCAAAGTGCTC 3' FGR hsv2-miR-H2 beg:275 end:294 pic:3' AGCGCGTACTGGG--TC-CGAGTCT 5'& |||| || ||||||| &5' ---------ACCCAAAGTGCTCAGA 3' FGR hsv2-miR-H22 beg:272 end:298 pic:3' CGGGTGGGT---GCAGGTCTGGGGA 5'& |||||||| .| ||||||.. &5' -CCCACCCAAAGTGCTCAGACCTT- 3' FGR jcv-miR-J1-5p beg:276 end:294 pic:3' TACGAAAAGGGTC-CA-GAGTCTT 5'& |||| || |||||| &5' --------CCCAAAGTGCTCAGA- 3' FGR jcv-miR-J1-5p beg:69 end:92 pic:3' TACGAAAAGGGTCCA---GAGTCTT 5'& || |||||| ||.|||| &5' --GCC---CCCAGGCTGGCTTAGAA 3' FGR kshv-miR-K12-10a beg:199 end:221 pic:3' CGGTGAGCCCCCCTGTTGTGAT 5'& ||.||| || |.||||| &5' -CCGCTCTGGCCCCAAGCACTA 3' FGR kshv-miR-K12-10astar beg:69 end:83 pic:3' TCACCACCATAGC-GGGGTTCGG 5'& | |||||.||. &5' ------------GCCCCCAGGCT 3' FGR kshv-miR-K12-1 beg:238 end:259 pic:3' CGAATGTGGGTCAAA-GGACATTA 5'& .| ||| ||||||. &5' ----GC-CCCTACATGCCTGTAG- 3' FGR kshv-miR-K12-12star beg:311 end:334 pic:3' AGTTGGTCC-CGTGGGAGGGGGT 5'& |||.. |.| ||||||.|| &5' --AACTGTATGTA-CCTCCCTCA 3' FGR kshv-miR-K12-8star beg:502 end:524 pic:3' TCGCCCCGCAATCA--CTCCCTCA 5'& |||| .|| ||||||| &5' ----GGGCCCAGGTTTGAGGGAG- 3' FGR mcv-miR-M1-5p beg:212 end:229 pic:3' TCACATG-GATCTTTAAGAAGGT 5'& .| ||| ||||||| &5' -----GCACTAT---TTCTTCC- 3' FGR mcv-miR-M1-5p beg:49 end:70 pic:3' TCACATGGATCTT--TAAGAAGGT 5'& || |||. .|||||||| &5' ------CCCAGAGCTGTTCTTCCA 3'

DNA & RNA Element - SomamiR Gene Name Mutation Mutation ID miR ID Chromosome Location Ref Alt mirsite mirseed Seed Class Sample Name Cancer Type FGR chr1:g.27616962G>A COSM3487718 hsa-miR-1281 chr1 27616962 G A caGAGGCGAtcatgt UCGCCUCC m7a TCGA-EE-A2MR-06 [skin][NS][malignant_melanoma][NS] FGR chr1:g.27616962G>A COSM3487718 hsa-miR-219a-5p chr1 27616962 G A cagaggCAATCAtgt UGAUUGUC m6a TCGA-EE-A2MR-06 [skin][NS][malignant_melanoma][NS] FGR chr1:g.27616962G>A COSM3487718 hsa-miR-2682-3p chr1 27616962 G A cAGAGGCGatcatgt CGCCUCUU m7a TCGA-EE-A2MR-06 [skin][NS][malignant_melanoma][NS] FGR chr1:g.27616962G>A COSM3487718 hsa-miR-3152-5p chr1 27616962 G A caGAGGCAATcatgt AUUGCCUC m8a TCGA-EE-A2MR-06 [skin][NS][malignant_melanoma][NS] FGR chr1:g.27616962G>A COSM3487718 hsa-miR-4317 chr1 27616962 G A cagaGGCAATcatgt ACAUUGCC m6c TCGA-EE-A2MR-06 [skin][NS][malignant_melanoma][NS] FGR chr1:g.27616962G>A COSM3487718 hsa-miR-4423-5p chr1 27616962 G A cagAGGCAAtcatgt AGUUGCCU m6c TCGA-EE-A2MR-06 [skin][NS][malignant_melanoma][NS] FGR chr1:g.27616962G>A COSM3487718 hsa-miR-4774-3p chr1 27616962 G A cagAGGCAATcatgt AUUGCCUA m7a TCGA-EE-A2MR-06 [skin][NS][malignant_melanoma][NS] FGR chr1:g.27616962G>A COSM3487718 hsa-miR-4782-3p chr1 27616962 G A cagaggCAATCAtgt UGAUUGUC m6a TCGA-EE-A2MR-06 [skin][NS][malignant_melanoma][NS] FGR chr1:g.27616962G>A COSM3487718 hsa-miR-508-3p chr1 27616962 G A cagaggCAATCAtgt UGAUUGUA m6a TCGA-EE-A2MR-06 [skin][NS][malignant_melanoma][NS] FGR chr1:g.27616962G>A COSM3487718 hsa-miR-509-3p chr1 27616962 G A cagaggCAATCAtgt UGAUUGGU m6a TCGA-EE-A2MR-06 [skin][NS][malignant_melanoma][NS] FGR chr1:g.27616962G>A COSM3487718 hsa-miR-580-5p chr1 27616962 G A cagaggcAATCATgt UAAUGAUU m6c TCGA-EE-A2MR-06 [skin][NS][malignant_melanoma][NS] FGR chr1:g.27616962G>A COSM3487718 hsa-miR-640 chr1 27616962 G A cagaggcGATCATgt AUGAUCCA m6a TCGA-EE-A2MR-06 [skin][NS][malignant_melanoma][NS] FGR chr1:g.27616962G>A COSM3487718 hsa-miR-668-5p chr1 27616962 G A caGAGGCGatcatgt UGCGCCUC m6c TCGA-EE-A2MR-06 [skin][NS][malignant_melanoma][NS] FGR chr1:g.27616962G>A COSM3487718 hsa-miR-6766-3p chr1 27616962 G A cagaggCAATCAtgt UGAUUGUC m6a TCGA-EE-A2MR-06 [skin][NS][malignant_melanoma][NS] FGR chr1:g.27616962G>A COSM3487718 hsa-miR-6785-3p chr1 27616962 G A cagaGGCGATcatgt ACAUCGCC m6c TCGA-EE-A2MR-06 [skin][NS][malignant_melanoma][NS] FGR chr1:g.27616962G>A COSM3487718 hsa-miR-6791-3p chr1 27616962 G A caGAGGCAatcatgt UGCCUCCU m6a TCGA-EE-A2MR-06 [skin][NS][malignant_melanoma][NS] FGR chr1:g.27616962G>A COSM3487718 hsa-miR-6829-3p chr1 27616962 G A caGAGGCAatcatgt UGCCUCCU m6a TCGA-EE-A2MR-06 [skin][NS][malignant_melanoma][NS] FGR chr1:g.27616962G>A COSM3487718 hsa-miR-6836-3p chr1 27616962 G A caGAGGCAatcatgt AUGCCUCC m6b TCGA-EE-A2MR-06 [skin][NS][malignant_melanoma][NS] FGR chr1:g.27616962G>A COSM3487718 hsa-miR-6894-3p chr1 27616962 G A cagAGGCAAtcatgt UUGCCUGC m6a TCGA-EE-A2MR-06 [skin][NS][malignant_melanoma][NS] FGR chr1:g.27616963C>T COSM2236368 hsa-miR-1281 chr1 27616963 C T ccaGAGGCGAtcatg UCGCCUCC m7a T2269 [large_intestine][colon][carcinoma][adenocarcinoma] FGR chr1:g.27616963C>T COSM2236368 hsa-miR-1306-5p chr1 27616963 C T ccaGAGGTGatcatg CCACCUCC m6b T2269 [large_intestine][colon][carcinoma][adenocarcinoma] FGR chr1:g.27616963C>T COSM2236368 hsa-miR-2682-3p chr1 27616963 C T ccAGAGGCGatcatg CGCCUCUU m7a T2269 [large_intestine][colon][carcinoma][adenocarcinoma] FGR chr1:g.27616963C>T COSM2236368 hsa-miR-3183 chr1 27616963 C T ccAGAGGCgatcatg GCCUCUCU m6a T2269 [large_intestine][colon][carcinoma][adenocarcinoma] FGR chr1:g.27616963C>T COSM2236368 hsa-miR-3622a-3p chr1 27616963 C T ccagAGGTGAtcatg UCACCUGA m6a T2269 [large_intestine][colon][carcinoma][adenocarcinoma] FGR chr1:g.27616963C>T COSM2236368 hsa-miR-3622b-3p chr1 27616963 C T ccagAGGTGAtcatg UCACCUGA m6a T2269 [large_intestine][colon][carcinoma][adenocarcinoma] FGR chr1:g.27616963C>T COSM2236368 hsa-miR-4757-5p chr1 27616963 C T ccAGAGGCgatcatg AGGCCUCU m6c T2269 [large_intestine][colon][carcinoma][adenocarcinoma] FGR chr1:g.27616963C>T COSM2236368 hsa-miR-4772-5p chr1 27616963 C T ccagaggTGATCAtg UGAUCAGG m6a T2269 [large_intestine][colon][carcinoma][adenocarcinoma] FGR chr1:g.27616963C>T COSM2236368 hsa-miR-668-5p chr1 27616963 C T ccaGAGGCGatcatg UGCGCCUC m6c T2269 [large_intestine][colon][carcinoma][adenocarcinoma] FGR chr1:g.27616963C>T COSM2236368 hsa-miR-6744-3p chr1 27616963 C T ccAGAGGCgatcatg GGGCCUCU m6c T2269 [large_intestine][colon][carcinoma][adenocarcinoma] FGR chr1:g.27616963C>T COSM2236368 hsa-miR-6765-3p chr1 27616963 C T ccagAGGTGAtcatg UCACCUGG m6a T2269 [large_intestine][colon][carcinoma][adenocarcinoma] FGR chr1:g.27616963C>T COSM2236368 hsa-miR-6781-3p chr1 27616963 C T ccAGAGGCgatcatg UGCCUCUU m6b T2269 [large_intestine][colon][carcinoma][adenocarcinoma] FGR chr1:g.27616963C>T COSM2236368 hsa-miR-6785-3p chr1 27616963 C T ccagaGGCGATcatg ACAUCGCC m6c T2269 [large_intestine][colon][carcinoma][adenocarcinoma] FGR chr1:g.27616963C>T COSM2236368 hsa-miR-6800-3p chr1 27616963 C T ccAGAGGTGatcatg CACCUCUC m7a T2269 [large_intestine][colon][carcinoma][adenocarcinoma] FGR chr1:g.27616963C>T COSM2236368 hsa-miR-6819-3p chr1 27616963 C T ccAGAGGCgatcatg AAGCCUCU m6c T2269 [large_intestine][colon][carcinoma][adenocarcinoma] FGR chr1:g.27616967G>C COSM3789840 hsa-miR-1281 chr1 27616967 G C cagaccaGAGGCGAt UCGCCUCC m7a TCGA-GV-A3QK-01 [urinary_tract][bladder][carcinoma][NS] FGR chr1:g.27616967G>C COSM3789840 hsa-miR-134-3p chr1 27616967 G C cagaCCACAGGcgat CCUGUGGG m7a TCGA-GV-A3QK-01 [urinary_tract][bladder][carcinoma][NS] FGR chr1:g.27616967G>C COSM3789840 hsa-miR-146a-3p chr1 27616967 G C cagacCAGAGGcgat CCUCUGAA m6a TCGA-GV-A3QK-01 [urinary_tract][bladder][carcinoma][NS] FGR chr1:g.27616967G>C COSM3789840 hsa-miR-1914-5p chr1 27616967 G C cagacCACAGGcgat CCCUGUGC m6b TCGA-GV-A3QK-01 [urinary_tract][bladder][carcinoma][NS] FGR chr1:g.27616967G>C COSM3789840 hsa-miR-203b-5p chr1 27616967 G C caGACCACaggcgat UAGUGGUC m6c TCGA-GV-A3QK-01 [urinary_tract][bladder][carcinoma][NS] FGR chr1:g.27616967G>C COSM3789840 hsa-miR-214-5p chr1 27616967 G C cagaccACAGGCgat UGCCUGUC m6b TCGA-GV-A3QK-01 [urinary_tract][bladder][carcinoma][NS] FGR chr1:g.27616967G>C COSM3789840 hsa-miR-2276-5p chr1 27616967 G C cagacCAGAGGcgat GCCCUCUG m6c TCGA-GV-A3QK-01 [urinary_tract][bladder][carcinoma][NS] FGR chr1:g.27616967G>C COSM3789840 hsa-miR-2682-3p chr1 27616967 G C cagaccAGAGGCGat CGCCUCUU m7a TCGA-GV-A3QK-01 [urinary_tract][bladder][carcinoma][NS] FGR chr1:g.27616967G>C COSM3789840 hsa-miR-3183 chr1 27616967 G C cagaccAGAGGCgat GCCUCUCU m6a TCGA-GV-A3QK-01 [urinary_tract][bladder][carcinoma][NS] FGR chr1:g.27616967G>C COSM3789840 hsa-miR-3191-5p chr1 27616967 G C cagaCCAGAGgcgat CUCUCUGG m6c TCGA-GV-A3QK-01 [urinary_tract][bladder][carcinoma][NS] FGR chr1:g.27616967G>C COSM3789840 hsa-miR-323a-5p chr1 27616967 G C caGACCACaggcgat AGGUGGUC m6c TCGA-GV-A3QK-01 [urinary_tract][bladder][carcinoma][NS] FGR chr1:g.27616967G>C COSM3789840 hsa-miR-326 chr1 27616967 G C cagaCCAGAGGcgat CCUCUGGG m7a TCGA-GV-A3QK-01 [urinary_tract][bladder][carcinoma][NS] FGR chr1:g.27616967G>C COSM3789840 hsa-miR-330-5p chr1 27616967 G C cagaCCAGAGgcgat UCUCUGGG m6b TCGA-GV-A3QK-01 [urinary_tract][bladder][carcinoma][NS] FGR chr1:g.27616967G>C COSM3789840 hsa-miR-4265 chr1 27616967 G C cagaCCACAGgcgat CUGUGGGC m6a TCGA-GV-A3QK-01 [urinary_tract][bladder][carcinoma][NS] FGR chr1:g.27616967G>C COSM3789840 hsa-miR-4314 chr1 27616967 G C cagaCCAGAGgcgat CUCUGGGA m6a TCGA-GV-A3QK-01 [urinary_tract][bladder][carcinoma][NS] FGR chr1:g.27616967G>C COSM3789840 hsa-miR-4318 chr1 27616967 G C cagaCCACAGgcgat CACUGUGG m6c TCGA-GV-A3QK-01 [urinary_tract][bladder][carcinoma][NS] FGR chr1:g.27616967G>C COSM3789840 hsa-miR-4322 chr1 27616967 G C cagaCCACAGgcgat CUGUGGGC m6a TCGA-GV-A3QK-01 [urinary_tract][bladder][carcinoma][NS] FGR chr1:g.27616967G>C COSM3789840 hsa-miR-4485-5p chr1 27616967 G C cagaccaCAGGCGat ACCGCCUG m6c TCGA-GV-A3QK-01 [urinary_tract][bladder][carcinoma][NS] FGR chr1:g.27616967G>C COSM3789840 hsa-miR-4490 chr1 27616967 G C cagACCAGAggcgat UCUGGUAA m6a TCGA-GV-A3QK-01 [urinary_tract][bladder][carcinoma][NS] FGR chr1:g.27616967G>C COSM3789840 hsa-miR-4536-5p chr1 27616967 G C cagACCACAggcgat UGUGGUAG m6a TCGA-GV-A3QK-01 [urinary_tract][bladder][carcinoma][NS] FGR chr1:g.27616967G>C COSM3789840 hsa-miR-4757-5p chr1 27616967 G C cagaccAGAGGCgat AGGCCUCU m6c TCGA-GV-A3QK-01 [urinary_tract][bladder][carcinoma][NS] FGR chr1:g.27616967G>C COSM3789840 hsa-miR-4763-5p chr1 27616967 G C cagaccaCAGGCGat CGCCUGCC m6a TCGA-GV-A3QK-01 [urinary_tract][bladder][carcinoma][NS] FGR chr1:g.27616967G>C COSM3789840 hsa-miR-4774-5p chr1 27616967 G C cagACCAGAggcgat UCUGGUAU m6a TCGA-GV-A3QK-01 [urinary_tract][bladder][carcinoma][NS] FGR chr1:g.27616967G>C COSM3789840 hsa-miR-5008-3p chr1 27616967 G C cagacCACAGGcgat CCUGUGCU m6a TCGA-GV-A3QK-01 [urinary_tract][bladder][carcinoma][NS] FGR chr1:g.27616967G>C COSM3789840 hsa-miR-514a-5p chr1 27616967 G C cagaCCAGAGgcgat UACUCUGG m6c TCGA-GV-A3QK-01 [urinary_tract][bladder][carcinoma][NS] FGR chr1:g.27616967G>C COSM3789840 hsa-miR-518c-5p chr1 27616967 G C cagaCCAGAGgcgat UCUCUGGA m6b TCGA-GV-A3QK-01 [urinary_tract][bladder][carcinoma][NS] FGR chr1:g.27616967G>C COSM3789840 hsa-miR-6078 chr1 27616967 G C cagaccaCAGGCGat CCGCCUGA m6b TCGA-GV-A3QK-01 [urinary_tract][bladder][carcinoma][NS] FGR chr1:g.27616967G>C COSM3789840 hsa-miR-6131 chr1 27616967 G C caGACCAGaggcgat GGCUGGUC m6c TCGA-GV-A3QK-01 [urinary_tract][bladder][carcinoma][NS] FGR chr1:g.27616967G>C COSM3789840 hsa-miR-6514-3p chr1 27616967 G C cagaccACAGGCgat CUGCCUGU m6c TCGA-GV-A3QK-01 [urinary_tract][bladder][carcinoma][NS] FGR chr1:g.27616967G>C COSM3789840 hsa-miR-668-5p chr1 27616967 G C cagaccaGAGGCGat UGCGCCUC m6c TCGA-GV-A3QK-01 [urinary_tract][bladder][carcinoma][NS] FGR chr1:g.27616967G>C COSM3789840 hsa-miR-6718-5p chr1 27616967 G C caGACCACaggcgat UAGUGGUC m6c TCGA-GV-A3QK-01 [urinary_tract][bladder][carcinoma][NS] FGR chr1:g.27616967G>C COSM3789840 hsa-miR-6720-3p chr1 27616967 G C cagaccaCAGGCGat CGCGCCUG m6c TCGA-GV-A3QK-01 [urinary_tract][bladder][carcinoma][NS] FGR chr1:g.27616967G>C COSM3789840 hsa-miR-6735-3p chr1 27616967 G C cagaccACAGGCgat AGGCCUGU m6c TCGA-GV-A3QK-01 [urinary_tract][bladder][carcinoma][NS] FGR chr1:g.27616967G>C COSM3789840 hsa-miR-6744-3p chr1 27616967 G C cagaccAGAGGCgat GGGCCUCU m6c TCGA-GV-A3QK-01 [urinary_tract][bladder][carcinoma][NS] FGR chr1:g.27616967G>C COSM3789840 hsa-miR-6764-3p chr1 27616967 G C cagACCAGAGgcgat UCUCUGGU m7b TCGA-GV-A3QK-01 [urinary_tract][bladder][carcinoma][NS] FGR chr1:g.27616967G>C COSM3789840 hsa-miR-6780a-3p chr1 27616967 G C cagacCAGAGGcgat CUCCUCUG m6c TCGA-GV-A3QK-01 [urinary_tract][bladder][carcinoma][NS] FGR chr1:g.27616967G>C COSM3789840 hsa-miR-6781-3p chr1 27616967 G C cagaccAGAGGCgat UGCCUCUU m6b TCGA-GV-A3QK-01 [urinary_tract][bladder][carcinoma][NS] FGR chr1:g.27616967G>C COSM3789840 hsa-miR-6811-3p chr1 27616967 G C cagacCACAGGCgat AGCCUGUG m7b TCGA-GV-A3QK-01 [urinary_tract][bladder][carcinoma][NS] FGR chr1:g.27616967G>C COSM3789840 hsa-miR-6819-3p chr1 27616967 G C cagaccAGAGGCgat AAGCCUCU m6c TCGA-GV-A3QK-01 [urinary_tract][bladder][carcinoma][NS] FGR chr1:g.27616967G>C COSM3789840 hsa-miR-6824-3p chr1 27616967 G C cagACCAGAGgcgat UCUCUGGU m7b TCGA-GV-A3QK-01 [urinary_tract][bladder][carcinoma][NS] FGR chr1:g.27616967G>C COSM3789840 hsa-miR-6848-3p chr1 27616967 G C cAGACCACaggcgat GUGGUCUC m7a TCGA-GV-A3QK-01 [urinary_tract][bladder][carcinoma][NS] FGR chr1:g.27616967G>C COSM3789840 hsa-miR-6877-3p chr1 27616967 G C cagaccAGAGGCgat CAGCCUCU m6c TCGA-GV-A3QK-01 [urinary_tract][bladder][carcinoma][NS] FGR chr1:g.27616967G>C COSM3789840 hsa-miR-7114-5p chr1 27616967 G C cagaCCACAGgcgat UCUGUGGA m6b TCGA-GV-A3QK-01 [urinary_tract][bladder][carcinoma][NS] FGR chr1:g.27616967G>C COSM3789840 hsa-miR-7152-3p chr1 27616967 G C caGACCAGAggcgat UCUGGUCC m7a TCGA-GV-A3QK-01 [urinary_tract][bladder][carcinoma][NS] FGR chr1:g.27616967G>C COSM3789840 hsa-miR-7978 chr1 27616967 G C cagACCAGAggcgat UCUGGUGU m6a TCGA-GV-A3QK-01 [urinary_tract][bladder][carcinoma][NS]

DNA & RNA Element - miRcode Gene Name Type microRNA Seed Position Seed Type Total Cons% Tr Region FGR High_conserved miR-7/7ab chr1:27939356 7-mer-A1 4 3pUTR, ncRNA FGR High_conserved miR-133abc chr1:27953040 7-mer-A1 11 5pUTR FGR High_conserved miR-9/9ab chr1:27943517 7-mer-m8 56 CDS FGR High_conserved miR-9/9ab chr1:27953038 7-mer-m8 11 5pUTR FGR High_conserved miR-93/93a/105/106a/291a-3p/294/295/302abcde/372/373/428/519a/520be/520acd-3p/1378/1420ac chr1:27938884 7-mer-m8 7 3pUTR, ncRNA FGR High_conserved miR-96/507/1271 chr1:27939032 7-mer-m8 16 3pUTR, ncRNA FGR High_conserved miR-137/137ab chr1:27961723 7-mer-A1 31 5pUTR FGR High_conserved miR-140/140-5p/876-3p/1244 chr1:27950327 7-mer-A1 16 CDS, ncRNA FGR High_conserved miR-142-3p chr1:27943371 7-mer-A1 44 CDS FGR High_conserved miR-145 chr1:27943438 7-mer-m8 18 CDS FGR High_conserved miR-145 chr1:27953002 7-mer-m8 16 5pUTR FGR High_conserved miR-146ac/146b-5p chr1:27961648 7-mer-m8 11 5pUTR FGR High_conserved miR-148ab-3p/152 chr1:27953033 7-mer-A1 24 5pUTR FGR High_conserved miR-150/5127 chr1:27938775 7-mer-m8 20 3pUTR FGR High_conserved miR-150/5127 chr1:27942266 7-mer-A1 60 CDS FGR High_conserved miR-150/5127 chr1:27943783 8-mer 18 CDS FGR High_conserved miR-150/5127 chr1:27950156 7-mer-A1 24 ncRNA FGR High_conserved miR-155 chr1:27943456 7-mer-m8 58 CDS FGR High_conserved miR-182 chr1:27939375 7-mer-m8 22 3pUTR, ncRNA FGR High_conserved miR-214/761/3619-5p chr1:27938950 7-mer-m8 9 3pUTR, ncRNA FGR High_conserved miR-217 chr1:27938938 7-mer-m8 11 3pUTR, ncRNA FGR High_conserved miR-22/22-3p chr1:27941431 7-mer-m8 11 CDS, ncRNA FGR High_conserved miR-22/22-3p chr1:27943762 7-mer-m8 56 CDS FGR High_conserved miR-221/222/222ab/1928 chr1:27950439 7-mer-A1 33 5pUTR FGR High_conserved miR-122/122a/1352 chr1:27939153 7-mer-A1 11 3pUTR, ncRNA FGR High_conserved miR-23abc/23b-3p chr1:27943463 7-mer-A1 29 CDS FGR High_conserved miR-25/32/92abc/363/363-3p/367 chr1:27961724 7-mer-A1 29 5pUTR FGR High_conserved miR-31 chr1:27939377 7-mer-A1 20 3pUTR, ncRNA FGR High_conserved miR-31 chr1:27949936 7-mer-m8 18 ncRNA FGR High_conserved miR-338/338-3p chr1:27941425 7-mer-A1 53 CDS, ncRNA FGR High_conserved miR-338/338-3p chr1:27950368 7-mer-m8 20 CDS, ncRNA FGR High_conserved miR-338/338-3p chr1:27961620 7-mer-A1 13 5pUTR, ncRNA FGR High_conserved miR-125a-5p/125b-5p/351/670/4319 chr1:27949653 7-mer-A1 44 CDS FGR High_conserved miR-10abc/10a-5p chr1:27950487 7-mer-m8 11 5pUTR FGR High_conserved miR-490-3p chr1:27938909 7-mer-m8 16 3pUTR, ncRNA FGR Medium_conserved miR-504/4725-5p chr1:27950010 7-mer-A1 11 ncRNA FGR Medium_conserved miR-505/505-3p chr1:27948086 7-mer-m8 9 CDS FGR Medium_conserved miR-539/539-5p chr1:27939158 7-mer-A1 13 3pUTR, ncRNA FGR Medium_conserved miR-539/539-5p chr1:27941417 7-mer-A1 11 CDS, ncRNA FGR Medium_conserved miR-539/539-5p chr1:27943728 7-mer-A1 40 CDS FGR Medium_conserved miR-615-3p chr1:27942158 7-mer-m8 9 ncRNA FGR Medium_conserved miR-615-3p chr1:27948143 7-mer-m8 36 CDS FGR Medium_conserved miR-874 chr1:27939277 7-mer-A1 22 3pUTR, ncRNA FGR Medium_conserved miR-185/882/3473/4306/4644 chr1:27939082 7-mer-m8 13 3pUTR, ncRNA FGR Medium_conserved miR-290-5p/292-5p/371-5p/293 chr1:27938905 7-mer-m8 16 3pUTR, ncRNA FGR Medium_conserved miR-296-3p chr1:27939404 7-mer-m8 4 3pUTR, ncRNA FGR Medium_conserved miR-296-3p chr1:27950238 7-mer-m8 11 CDS, ncRNA FGR Medium_conserved miR-299/299-3p/3563-3p chr1:27950278 7-mer-m8 18 CDS, ncRNA FGR Medium_conserved miR-324-5p chr1:27938941 7-mer-A1 11 3pUTR, ncRNA FGR Medium_conserved miR-324-5p chr1:27943774 7-mer-A1 44 CDS FGR Medium_conserved miR-326/330/330-5p chr1:27938649 7-mer-m8 11 3pUTR FGR Medium_conserved miR-326/330/330-5p chr1:27939237 7-mer-m8 16 3pUTR, ncRNA FGR Medium_conserved miR-326/330/330-5p chr1:27939366 7-mer-m8 16 3pUTR, ncRNA FGR Medium_conserved miR-326/330/330-5p chr1:27941405 7-mer-m8 4 CDS, ncRNA FGR Medium_conserved miR-328a/328b-3p chr1:27941400 7-mer-m8 27 CDS, ncRNA FGR Medium_conserved miR-329/329ab/362-3p chr1:27938862 7-mer-A1 16 3pUTR, ncRNA FGR Medium_conserved miR-329/329ab/362-3p chr1:27950204 7-mer-m8 13 CDS, ncRNA FGR Medium_conserved miR-340-5p chr1:27939112 7-mer-A1 44 3pUTR, ncRNA FGR Medium_conserved miR-370 chr1:27938721 7-mer-m8 16 3pUTR FGR Medium_conserved miR-370 chr1:27961683 7-mer-m8 9 5pUTR FGR Medium_conserved miR-378/422a/378bcdefhi chr1:27939039 7-mer-m8 11 3pUTR, ncRNA FGR Medium_conserved miR-421 chr1:27948087 7-mer-m8 9 CDS FGR Medium_conserved miR-431 chr1:27942137 7-mer-A1 9 ncRNA FGR Medium_conserved miR-433 chr1:27942031 7-mer-A1 80 CDS, ncRNA FGR Medium_conserved miR-433 chr1:27942304 8-mer 16 CDS FGR Medium_conserved miR-485-5p/1698/1703/1962 chr1:27942131 7-mer-m8 11 ncRNA FGR Medium_conserved miR-488 chr1:27950077 7-mer-A1 11 ncRNA FGR Medium_conserved miR-491-5p chr1:27939145 7-mer-m8 4 3pUTR, ncRNA FGR Medium_conserved miR-494 chr1:27952724 7-mer-m8 0 5pUTR, ncRNA

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score FGR RAID00053703 hsa-miR-1271-5p miRNA MIMAT0005796 FGR mRNA 2268 CLIP-seq//Prediction 0.6308 FGR RAID00064874 hsa-miR-4519 miRNA MIMAT0019056 FGR mRNA 2268 Prediction 0.1828 FGR RAID00071741 hsa-miR-214-3p miRNA MIMAT0000271 FGR mRNA 2268 Prediction 0.1828 FGR RAID00074475 hsa-miR-4303 miRNA MIMAT0016856 FGR mRNA 2268 Prediction 0.1828 FGR RAID00115777 hsa-let-7a-5p miRNA MIMAT0000062 FGR mRNA 2268 CLIP-seq//Prediction 0.6308 FGR RAID00149291 hsa-miR-7515 miRNA MIMAT0029310 FGR mRNA 2268 Prediction 0.1828 FGR RAID00270139 hsa-miR-491-5p miRNA MIMAT0002807 FGR mRNA 2268 Prediction 0.1828 FGR RAID00349882 hsa-miR-4801 miRNA MIMAT0019980 FGR mRNA 2268 Prediction 0.1828 FGR RAID00449649 hsa-miR-6809-5p miRNA MIMAT0027518 FGR mRNA 2268 Prediction 0.1828 FGR RAID00457911 hsa-miR-326 miRNA MIMAT0000756 FGR mRNA 2268 Prediction 0.1828 FGR RAID00569291 hsa-miR-892c-5p miRNA MIMAT0025857 FGR mRNA 2268 Prediction 0.1828 FGR RAID00660185 hsa-miR-374a-5p miRNA MIMAT0000727 FGR mRNA 2268 Prediction 0.1828 FGR RAID00720426 hsa-miR-6766-5p miRNA MIMAT0027432 FGR mRNA 2268 Prediction 0.1828 FGR RAID00759289 hsa-miR-4731-3p miRNA MIMAT0019854 FGR mRNA 2268 Prediction 0.1828 FGR RAID00837846 hsa-miR-3690 miRNA MIMAT0018119 FGR mRNA 2268 Prediction 0.1828 FGR RAID00855363 hsa-let-7b-5p miRNA MIMAT0000063 FGR mRNA 2268 CLIP-seq 0.5483 FGR RAID00902937 hsa-miR-95-5p miRNA MIMAT0026473 FGR mRNA 2268 Prediction 0.1828 FGR RAID00935463 hsa-miR-603 miRNA MIMAT0003271 FGR mRNA 2268 Prediction 0.1828 FGR RAID00995345 hsa-miR-4419a miRNA MIMAT0018931 FGR mRNA 2268 Prediction 0.1828 FGR RAID01104222 hsa-miR-378a-3p miRNA MIMAT0000732 FGR mRNA 2268 CLIP-seq//Prediction 0.6308 FGR RAID01193390 hsa-miR-3157-3p miRNA MIMAT0019210 FGR mRNA 2268 Prediction 0.1828 FGR RAID01214427 hsa-miR-6852-5p miRNA MIMAT0027604 FGR mRNA 2268 Prediction 0.1828 FGR RAID01447491 hsa-miR-1279 miRNA MIMAT0005937 FGR mRNA 2268 Prediction 0.1828 FGR RAID01574498 hsa-mir-340 miRNA MI0000802 FGR mRNA 2268 Prediction 0.1828 FGR RAID01574686 hsa-miR-6846-5p miRNA MIMAT0027592 FGR mRNA 2268 Prediction 0.1828 FGR RAID01585401 hsa-let-7c-5p miRNA MIMAT0000064 FGR mRNA 2268 CLIP-seq 0.5483 FGR RAID01766051 hsa-miR-96-5p miRNA MIMAT0000095 FGR mRNA 2268 CLIP-seq//Prediction 0.6308 FGR RAID01779561 hsa-miR-15b-5p miRNA MIMAT0000417 FGR mRNA 2268 Prediction 0.1828 FGR RAID01781351 hsa-miR-4644 miRNA MIMAT0019704 FGR mRNA 2268 Prediction 0.1828 FGR RAID01794933 hsa-miR-708-3p miRNA MIMAT0004927 FGR mRNA 2268 Prediction 0.1828 FGR RAID01813003 hsa-miR-4306 miRNA MIMAT0016858 FGR mRNA 2268 Prediction 0.1828 FGR RAID01843948 hsa-miR-6857-5p miRNA MIMAT0027614 FGR mRNA 2268 Prediction 0.1828 FGR RAID01883337 hsa-miR-3123 miRNA MIMAT0014985 FGR mRNA 2268 Prediction 0.1828 FGR RAID01907704 hsa-miR-92a-2-5p miRNA MIMAT0004508 FGR mRNA 2268 Prediction 0.1828 FGR RAID01930912 hsa-miR-4667-5p miRNA MIMAT0019743 FGR mRNA 2268 Prediction 0.1828 FGR RAID02033080 hsa-miR-185-5p miRNA MIMAT0000455 FGR mRNA 2268 Prediction 0.2202 FGR RAID02033713 hsa-miR-7851-3p miRNA MIMAT0030426 FGR mRNA 2268 Prediction 0.1828 FGR RAID02060676 hsa-miR-340-5p miRNA MIMAT0004692 FGR mRNA 2268 Prediction 0.1828 FGR RAID02258235 hsa-miR-590-3p miRNA MIMAT0004801 FGR mRNA 2268 Prediction 0.1828 FGR RAID02471829 hsa-miR-422a miRNA MIMAT0001339 FGR mRNA 2268 CLIP-seq//Prediction 0.6308 FGR RAID02476971 hsa-miR-4700-5p miRNA MIMAT0019796 FGR mRNA 2268 Prediction 0.1828 FGR RAID02636681 hsa-miR-182-5p miRNA MIMAT0000259 FGR mRNA 2268 CLIP-seq 0.5483 FGR RAID02681023 hsa-miR-939-3p miRNA MIMAT0022939 FGR mRNA 2268 Prediction 0.1828 FGR RAID02697941 hsa-miR-296-3p miRNA MIMAT0004679 FGR mRNA 2268 Prediction 0.1828 FGR RAID02836176 hsa-miR-8089 miRNA MIMAT0031016 FGR mRNA 2268 Prediction 0.1828 FGR RAID02884650 hsa-miR-330-5p miRNA MIMAT0004693 FGR mRNA 2268 Prediction 0.1828 FGR RAID02902790 hsa-miR-143-3p miRNA MIMAT0000435 FGR mRNA 2268 CLIP-seq 0.5483 FGR RAID03043741 hsa-let-7e-5p miRNA MIMAT0000066 FGR mRNA 2268 CLIP-seq//Prediction 0.6308 FGR RAID03047360 hsa-miR-3607-3p miRNA MIMAT0017985 FGR mRNA 2268 Prediction 0.1828 FGR RAID03133606 hsa-miR-140-5p miRNA MIMAT0000431 FGR mRNA 2268 Prediction 0.1828 FGR RAID03352161 hsa-miR-4469 miRNA MIMAT0018996 FGR mRNA 2268 Prediction 0.1828 FGR RAID03442972 hsa-miR-4328 miRNA MIMAT0016926 FGR mRNA 2268 Prediction 0.1828 FGR RAID03466987 hsa-miR-1227-5p miRNA MIMAT0022941 FGR mRNA 2268 Prediction 0.1828 FGR RAID03546022 hsa-miR-582-5p miRNA MIMAT0003247 FGR mRNA 2268 Prediction 0.1828 FGR RAID03604796 hsa-miR-600 miRNA MIMAT0003268 FGR mRNA 2268 Prediction 0.1828 FGR RAID03688864 hsa-miR-6756-5p miRNA MIMAT0027412 FGR mRNA 2268 Prediction 0.1828 FGR RAID03741983 hsa-miR-6848-5p miRNA MIMAT0027596 FGR mRNA 2268 Prediction 0.1828 FGR RAID03775122 hsa-let-7f-5p miRNA MIMAT0000067 FGR mRNA 2268 CLIP-seq//Prediction 0.6308 FGR RAID03805797 hsa-miR-6503-3p miRNA MIMAT0025463 FGR mRNA 2268 Prediction 0.1828 FGR RAID03856963 hsa-miR-3686 miRNA MIMAT0018114 FGR mRNA 2268 Prediction 0.1828

DNA & RNA Element - LncRNADisease Gene Name LncRNA LncRNA Strand Gene Strand GO ID Status Terms FGR lnc-FAM76A-1:1 + - GO:0007596 TAS blood coagulation FGR lnc-IFI6-1:1 - - GO:0007596 TAS blood coagulation