SNP - dbSNP |
dbSNP | Type | Alleles | Het | Se(het) | Fxn-class | Gene Name | Assembly | Chr-pos | Sequence | Entrez Gene |
rs510272 | snp | A/C | 0 | 0 | intron-variant | USP2 | GRCh38.p7 | 11:119370943 | CCACTGGGAATCTGC[A/C]TCCTCCCCACACAGG | 9099 |
rs511401 | snp | C/G | 0.207864 | 0.246424 | intron-variant, upstream-variant-2KB | USP2 | GRCh38.p7 | 11:119379350 | TTCAAGAGGAAAGAG[C/G]ATTGAAAAGAGCACA | 9099 |
rs512608 | snp | A/G | 0.206642 | 0.246211 | upstream-variant-2KB, intron-variant | USP2, USP2-AS1 | GRCh38.p7 | 11:119383087 | tgttATATTTCCTTA[A/G]GGCCCTCATTCCATC | 9099 |
rs513841 | snp | A/T | 0.209084 | 0.246629 | intron-variant | USP2 | GRCh38.p7 | 11:119370539 | CGTGCGGCCTGGACC[A/T]CTTCTTTCTAAAACT | 9099 |
rs514808 | snp | C/T | 0.0614824 | 0.164198 | intron-variant | USP2 | GRCh38.p7 | 11:119370410 | CCTTAGCTTCTGAAC[C/T]TGTGTCCTCCTCTGT | 9099 |
rs565296 | snp | A/G | 0.22576 | 0.248822 | intron-variant, upstream-variant-2KB | USP2, USP2-AS1 | GRCh38.p7 | 11:119381441 | GGGGATCCGGGAGGG[A/G]GGATTCGGGGATCAG | 9099 |
rs573396 | snp | C/T | 0.449218 | 0.151037 | intron-variant | USP2 | GRCh38.p7 | 11:119368665 | CACACCCTTGCCCTC[C/T]GCTCTAGGACCTGTT | 9099 |
rs576945 | snp | C/T | 0.213635 | 0.247341 | intron-variant | USP2 | GRCh38.p7 | 11:119376186 | CAGGCTGTGCTTTCA[C/T]CTGGAAGGTGCTAGG | 9099 |
rs587726 | snp | C/T | 0.139903 | 0.224452 | intron-variant | USP2 | GRCh38.p7 | 11:119370115 | GGGAGGTGGAGGTTG[C/T]AGTGAGCCGAGATCG | 9099 |
rs587985 | snp | C/T | 0.46772 | 0.122873 | intron-variant, synonymous-codon | USP2 | GRCh38.p7 | 11:119373385 | GGCCCCATAGGAGGA[C/T]GGGGTGTAGGCACCA | 9099 |
rs602492 | snp | G/T | 0.210396 | 0.247097 | intron-variant | USP2 | GRCh38.p7 | 11:119371033 | TAGTTTAGTCTGCGC[G/T]GAGGTTTTCCATCTC | 9099 |
rs614192 | snp | A/G | 0.212425 | 0.24716 | intron-variant, upstream-variant-2KB | USP2 | GRCh38.p7 | 11:119377999 | GAGTTTCAGAAGCAC[A/G]CCTAAACAGGGTTAA | 9099 |
rs615001 | snp | C/T | 0.209388 | 0.246679 | intron-variant | USP2 | GRCh38.p7 | 11:119371567 | TTATCAAAGTTGCTC[C/T]CTCAAGACCTTTAGT | 9099 |
rs619055 | snp | A/G | | | intron-variant | USP2 | GRCh38.p7 | 11:119362701 | GGTCGACAGGGAGAA[A/G]GGGGCCAGAACTGCA | 9099 |
rs656439 | snp | C/T | 0.205723 | 0.246048 | intron-variant, upstream-variant-2KB | USP2, USP2-AS1 | GRCh38.p7 | 11:119380164 | TTGTGATCCGCCCGC[C/T]TTGGCCTCCCAAAGT | 9099 |
rs658654 | snp | C/T | 0.24134 | 0.24985 | intron-variant, upstream-variant-2KB | USP2 | GRCh38.p7 | 11:119377610 | GCATCTACCCCAGCT[C/T]GGGGCCTTGGGTCCC | 9099 |
rs658921 | snp | A/G | 0.0372196 | 0.131242 | intron-variant | USP2 | GRCh38.p7 | 11:119374475 | CCCAGAGGATCATGA[A/G]TTTTAATCTATCTGT | 9099 |
rs659705 | snp | A/G | 0.212728 | 0.247206 | intron-variant | USP2 | GRCh38.p7 | 11:119374639 | TTAGGGTCAGTTGGG[A/G]ACCCCCAGAGGCCTT | 9099 |
rs670906 | snp | G/T | 0.196844 | 0.244283 | missense, utr-variant-5-prime, upstream-variant-2KB | USP2, USP2-AS1 | GRCh38.p7 | 11:119381489 | TGCCTCTTCTTGGAG[G/T]ATGGACGAGTCGAAC | 9099 |
rs674977 | snp | C/T | 0.0584853 | 0.160693 | intron-variant | USP2 | GRCh38.p7 | 11:119375791 | GGAATTGGTATTCTT[C/T]GGGCAGCGCCCCAAG | 9099 |
rs675873 | snp | C/T | 0.459004 | 0.137176 | intron-variant | USP2 | GRCh38.p7 | 11:119375998 | ATTGCCAGACCCCTC[C/T]GCCTCCTCCTAGCAG | 9099 |
rs676465 | snp | C/T | 0.412249 | 0.190198 | intron-variant | USP2 | GRCh38.p7 | 11:119369212 | GCTGAGCTGCGCCCC[C/T]CTGGCCTGGCATTTT | 9099 |
rs677008 | snp | A/G | 0.257176 | 0.249897 | intron-variant | USP2 | GRCh38.p7 | 11:119369361 | AAGTTCGTGTTGCCT[A/G]TTACTGTTAATGAGG | 9099 |
rs679556 | snp | C/G | 0.148326 | 0.228391 | intron-variant | USP2 | GRCh38.p7 | 11:119372005 | AGAGGCGTGTGCGGG[C/G]ATTAGTTGGCGAGCG | 9099 |
rs680268 | snp | A/G | 0.253544 | 0.249975 | intron-variant | USP2 | GRCh38.p7 | 11:119368979 | GGTCTATGGAAGGAC[A/G]AGCTGTTCCCATTGA | 9099 |
rs682006 | snp | C/T | 0 | 0 | upstream-variant-2KB, intron-variant | USP2, USP2-AS1 | GRCh38.p7 | 11:119383356 | cattctttccccaca[C/T]ttatgtgtagttcac | 9099 |
rs687009 | snp | C/G | 0.213333 | 0.247296 | intron-variant | USP2 | GRCh38.p7 | 11:119375857 | AGTGCTGGGGCCAAA[C/G]GAGGTCCAGAGGACA | 9099 |
rs891290 | snp | A/T | 0.0379877 | 0.132479 | intron-variant | USP2 | GRCh38.p7 | 11:119374300 | CTCTACAAACACAGA[A/T]CTCAAATTGGTCCTG | 9099 |
rs1054953 | snp | A/G | | | synonymous-codon | USP2 | GRCh38.p7 | 11:119357562 | GAGCTTGCTGGTTCG[A/G]ATCCTGGATTCTGAG | 9099 |
rs1133595 | snp | A/T | | | missense | USP2 | GRCh38.p7 | 11:119356872 | GCCAGTTCGTAGAAG[A/T]GCAGGTAGGCGTCGC | 9099 |
rs1652024 | snp | A/C | 0.146623 | 0.228562 | intron-variant | USP2 | GRCh38.p7 | 11:119371846 | TCCATCCATTCATCC[A/C]TGCAATCAGCAGGTC | 9099 |
rs1835210 | snp | G/T | 0 | 0 | intron-variant | USP2 | GRCh38.p7 | 11:119362698 | CAGGGTCGACAGGGA[G/T]AAGGGGGCCAGAACT | 9099 |
rs1940804 | snp | C/T | 0.370772 | 0.218893 | intron-variant | USP2 | GRCh38.p7 | 11:119366507 | ATATGTTTATCTTTG[C/T]TTTATAAGTGTTTCA | 9099 |
rs2115645 | snp | A/G | 0.303438 | 0.244222 | intron-variant | USP2 | GRCh38.p7 | 11:119378778 | CAAGCACCTCTGCCC[A/G]GGTACTCTCCTGGTG | 9099 |
rs2195525 | snp | C/T | 0.479095 | 0.100076 | intron-variant, upstream-variant-2KB | USP2 | GRCh38.p7 | 11:119364694 | TCGTGAAGACCCAAA[C/T]TCATGCAGTCTGTGG | 9099 |
rs2195526 | snp | C/T | 0.424193 | 0.179323 | intron-variant, upstream-variant-2KB | USP2 | GRCh38.p7 | 11:119366041 | CTGGGATTACAGGTG[C/T]GCACCACCACGCCTG | 9099 |
rs2217380 | snp | G/T | 0.126564 | 0.217402 | intron-variant | USP2 | GRCh38.p7 | 11:119369169 | AAGCAGAAGGTGAAG[G/T]CTCAGGGGAGGCCCT | 9099 |
rs2241646 | snp | A/G | 0.408086 | 0.193672 | synonymous-codon | USP2 | GRCh38.p7 | 11:119359254 | AACAAAGCGCGGTGC[A/G]TATCTCTGGATCTGG | 9099 |
rs2288596 | snp | A/G | 0.00438332 | 0.0466095 | intron-variant | USP2 | GRCh38.p7 | 11:119359784 | AGGCTATCCTTTCAT[A/G]GCCTCAAGTTCCTCT | 9099 |
rs2435193 | snp | G/T | | | intron-variant | USP2 | GRCh38.p7 | 11:119358512 | gtagagatggggttt[G/T]gccatgttggccagg | 9099 |
rs2509401 | snp | G/T | 0.0360663 | 0.129354 | utr-variant-3-prime | USP2 | GRCh38.p7 | 11:119355222 | CTGCCAACTGATTTC[G/T]CAAAGCTATTATTTA | 9099 |
rs3195469 | snp | A/C | | | missense | USP2 | GRCh38.p7 | 11:119356849 | GAACTGGCCAGCCCG[A/C]CCTCCCGAATGTAGC | 9099 |
rs3195470 | snp | G/T | 0 | 0 | missense | USP2 | GRCh38.p7 | 11:119356838 | CCCGCCCTCCCGAAT[G/T]TAGCGCCAGGAGCCA | 9099 |
rs3751022 | snp | C/G | 0.0368353 | 0.130617 | intron-variant | USP2 | GRCh38.p7 | 11:119366953 | AAAGCTTTAGCGTGG[C/G]AGCACTTTGAGAAGT | 9099 |
rs3833766 | in-del | -/AA | 0.44638 | 0.154709 | intron-variant | USP2 | GRCh38.p7 | 11:119366648 | GTTGATCTTGTCTCT[-/AA]AGAGGGCCAGACCAG | 9099 |
rs4589313 | snp | A/G | 0.399432 | 0.200425 | intron-variant, upstream-variant-2KB | USP2 | GRCh38.p7 | 11:119366084 | ATTTTTAGTAGAGAC[A/G]GGGTTTCACCATGTT | 9099 |
rs4938649 | snp | C/T | 0.0393691 | 0.134665 | intron-variant, synonymous-codon | USP2 | GRCh38.p7 | 11:119372902 | GTAGTCGACCAGGTA[C/T]TCAGGGCAGCTGGCT | 9099 |
rs5795178 | in-del | -/AG | 0.153997 | 0.230832 | intron-variant | USP2 | GRCh38.p7 | 11:119370608 | CAGGAAATGACGATA[-/AG]AGGGGTGGAGAGATC | 9099 |
rs7115997 | snp | A/C | 0.0162398 | 0.0886349 | intron-variant | USP2 | GRCh38.p7 | 11:119375572 | AGACAGACAGAGGCA[A/C]AGGGTCGGGGTGGGG | 9099 |
rs7117852 | snp | C/G/T | 0.100532 | 0.203967 | utr-variant-3-prime | USP2 | GRCh38.p7 | 11:119356534 | CGAGGGTCTTCCCCC[C/G/T]CAAGACACAGTTGTT | 9099 |
rs7126754 | snp | A/G | | | upstream-variant-2KB, intron-variant | USP2, USP2-AS1 | GRCh38.p7 | 11:119383103 | GGCCCTCATTCCATC[A/G]CTTCATTTTACAGAT | 9099 |
rs7127021 | snp | A/G | 0.0103295 | 0.0711199 | upstream-variant-2KB, intron-variant | USP2, USP2-AS1 | GRCh38.p7 | 11:119383276 | taagagctatggggc[A/G]catcaagcaaggagg | 9099 |
rs7927942 | snp | C/T | 0.0345262 | 0.126772 | intron-variant, upstream-variant-2KB | USP2 | GRCh38.p7 | 11:119377906 | TAACCTTCATGGCTT[C/T]TCTCTGCCCAGATCT | 9099 |
rs7929563 | snp | G/T | 0.158962 | 0.232835 | intron-variant, upstream-variant-2KB | USP2 | GRCh38.p7 | 11:119365898 | tattttatttgtttt[G/T]ttttttttttttttg | 9099 |
rs7936181 | snp | C/T | | | intron-variant | USP2 | GRCh38.p7 | 11:119371026 | GGGTCTGTAGTTTAG[C/T]CTGCGCTGAGGTTTT | 9099 |
rs7937208 | snp | C/T | 0.31357 | 0.241783 | intron-variant | USP2 | GRCh38.p7 | 11:119358664 | TGCTTTGTTGAACAC[C/T]AGGCAGAAACAGGCT | 9099 |
rs7937436 | snp | A/G | 0 | 0 | intron-variant | USP2 | GRCh38.p7 | 11:119375040 | GCCCTCTGAAGGTCT[A/G]TGATAATATCAGGGC | 9099 |
rs7943722 | snp | C/T | 0.299411 | 0.245069 | upstream-variant-2KB | USP2, USP2-AS1 | GRCh38.p7 | 11:119381738 | CACTGAGTCGCGTCA[C/T]GGCTATTGGCTTGTT | 9099 |
rs7945115 | snp | A/G | 0.123105 | 0.215401 | intron-variant | USP2 | GRCh38.p7 | 11:119369746 | TACAGCCCAGCTGAT[A/G]GGTGTCCAAGGTTAG | 9099 |
rs7949607 | snp | C/G/T | 0.00279162 | 0.0372561 | intron-variant | USP2 | GRCh38.p7 | 11:119371032 | GTAGTTTAGTCTGCG[C/G/T]TGAGGTTTTCCATCT | 9099 |
rs7949694 | snp | A/G | | | intron-variant | USP2 | GRCh38.p7 | 11:119370979 | GATCCCCAGTAAAGG[A/G]GAATACTGCTGTCAT | 9099 |
rs7949724 | snp | C/T | | | intron-variant | USP2 | GRCh38.p7 | 11:119371150 | ATGAATCGTTAAGCC[C/T]TGCAGTGACTCTGAC | 9099 |
rs7949756 | snp | A/G | | | intron-variant | USP2 | GRCh38.p7 | 11:119371261 | CCCGCAGAGGCTTCT[A/G]GGACCCGAGCCCCTC | 9099 |
rs7950073 | snp | A/G | | | intron-variant | USP2 | GRCh38.p7 | 11:119371268 | AGGCTTCTAGGACCC[A/G]AGCCCCTCCGAGGAG | 9099 |
rs10692151 | in-del | -/TTT | 0 | 0 | intron-variant, upstream-variant-2KB | USP2, USP2-AS1 | GRCh38.p7 | 11:119379934 | TTTTTTTTTTTTTTT[-/TTT]GAGACGGAGTCTCCG | 9099 |
rs10790291 | snp | A/G | 0.283947 | 0.247685 | intron-variant | USP2 | GRCh38.p7 | 11:119362203 | AGTGCTAATGGGGGT[A/G]GGGAAATGGGAAAAC | 9099 |
rs10892354 | snp | C/T | 0.36955 | 0.219562 | intron-variant | USP2 | GRCh38.p7 | 11:119367671 | AGGCCAAAAGCTCTG[C/T]GCACCTTTGAGCCCA | 9099 |
rs10892355 | snp | C/T | 0.499891 | 0.00738737 | intron-variant | USP2 | GRCh38.p7 | 11:119370099 | AGAATCACTTGAACC[C/T]GGGAGGTGGAGGTTG | 9099 |
rs11217252 | snp | A/G | 0 | 0 | utr-variant-3-prime | USP2 | GRCh38.p7 | 11:119355322 | TTGCCCTTGGGCTCA[A/G]GTTCACAGGTCTTCT | 9099 |
rs11217253 | snp | C/G | 0.406468 | 0.194981 | intron-variant | USP2 | GRCh38.p7 | 11:119357134 | GAGGGTGGAGGAGTG[C/G]GGGGAGAGTGGGTGG | 9099 |
rs11217255 | snp | A/G | 0.422158 | 0.181278 | intron-variant | USP2 | GRCh38.p7 | 11:119360957 | ACTCCTAGAAGTCCA[A/G]TATATAAAGTAACTC | 9099 |
rs11217256 | snp | C/G | 0.23031 | 0.249223 | intron-variant, upstream-variant-2KB | USP2 | GRCh38.p7 | 11:119365880 | TGTAGTAACTATTAC[C/G]TCTATTTTATTTGTT | 9099 |
rs11217257 | snp | A/G | 0.397994 | 0.201489 | intron-variant | USP2 | GRCh38.p7 | 11:119367745 | CTCCTTCTTTTGCAT[A/G]TGTCTCCGTCTGGGG | 9099 |
rs11217258 | snp | C/T | 0.233527 | 0.249457 | intron-variant | USP2 | GRCh38.p7 | 11:119369894 | ATTTAAGAACTTCTT[C/T]TTGGCCAGGCGTGGT | 9099 |
rs11217259 | snp | G/T | | | intron-variant | USP2 | GRCh38.p7 | 11:119372642 | GGAGTCGAGCCCTCA[G/T]CCTGGCTGTTCTCCA | 9099 |
rs11217260 | snp | A/G | 0 | 0 | intron-variant | USP2 | GRCh38.p7 | 11:119374103 | GGGTGGGCAGGGGAG[A/G]CCGTGAGTGAGCATG | 9099 |
rs11604901 | snp | A/C | | | intron-variant, upstream-variant-2KB | USP2 | GRCh38.p7 | 11:119364653 | TGCACAAACTTTTGT[A/C]TAGAGTTCCGGGGGT | 9099 |
rs11828770 | snp | A/G | 0.0134861 | 0.0810011 | utr-variant-3-prime, downstream-variant-500B | USP2 | GRCh38.p7 | 11:119355975 | GGATATTTCAGGAGG[A/G]GCAGTTACCCCCTGG | 9099 |
rs12161775 | snp | C/G | | | intron-variant, missense | USP2 | GRCh38.p7 | 11:119373185 | CCTAAAGGCCGCTCA[C/G]TACCCCGGGTCTGGC | 9099 |
rs12277700 | snp | A/C | 0.229723 | 0.249176 | intron-variant, upstream-variant-2KB | USP2 | GRCh38.p7 | 11:119365982 | TCACTGCAACCTCTG[A/C]CTCCCGGGTTCAAAC | 9099 |
rs12285901 | snp | A/G | 0.232359 | 0.249377 | intron-variant, upstream-variant-2KB | USP2 | GRCh38.p7 | 11:119365250 | TCCCCACATGTACAC[A/G]CACACATGACCACAG | 9099 |
rs12292387 | snp | C/T | 0.0482946 | 0.147699 | intron-variant | USP2 | GRCh38.p7 | 11:119373670 | AGAAGCACACATGCA[C/T]GCAGGTGTGCACAGG | 9099 |
rs12419866 | snp | C/T | 0.319616 | 0.240112 | intron-variant | USP2 | GRCh38.p7 | 11:119369914 | CCAGGCGTGGTGGCT[C/T]ACACCTGTAATCTCA | 9099 |
rs12419879 | snp | C/T | 0.349013 | 0.229557 | intron-variant | USP2 | GRCh38.p7 | 11:119370047 | TGGTGTGGTGGTACA[C/T]GCCTGTAGTCCTAGC | 9099 |
rs12789250 | snp | C/T | | | intron-variant, upstream-variant-2KB | USP2 | GRCh38.p7 | 11:119364394 | CCCAGCCCGCTGACC[C/T]CCGGCCAGGCAGGCC | 9099 |
rs12789449 | snp | A/C | | | intron-variant, upstream-variant-2KB | USP2 | GRCh38.p7 | 11:119364451 | GAGGCCCTGGCCGGC[A/C]TCGGGGTTGAGGCTC | 9099 |
rs33929148 | snp | C/T | 0.0837507 | 0.186711 | intron-variant, missense | USP2 | GRCh38.p7 | 11:119372960 | AGCTCCTTGCGCGTC[C/T]GGGCCAGCATGGGGC | 9099 |
rs34432859 | in-del | -/A | | | intron-variant | USP2 | GRCh38.p7 | 11:119360753 | TTTTCAACAACCAAC[-/A]AAAATATTCTTCAGG | 9099 |
rs34691638 | snp | C/G | | | intron-variant | USP2 | GRCh38.p7 | 11:119363433 | GACAGTGAAGGGGAG[C/G]CGGCCCCTTTCTGCC | 9099 |
rs35224356 | snp | A/G | 0.00240695 | 0.0346075 | intron-variant, missense | USP2 | GRCh38.p7 | 11:119372792 | GTGTAGCGGCCAATG[A/G]GTCGGTAGGTTGGGC | 9099 |
rs35310980 | snp | A/T | 0.0722614 | 0.17581 | intron-variant, upstream-variant-2KB | USP2 | GRCh38.p7 | 11:119365700 | CTCTAAGGCTGTTTG[A/T]CCACAGGCCCACCAC | 9099 |
rs35560476 | snp | G/T | | | intron-variant | USP2 | GRCh38.p7 | 11:119358347 | TTTGAGATGGAGTTT[G/T]GCTCTGTCCCCCAGG | 9099 |
rs35832174 | snp | A/C/G | 3.3872e-05 | 0.00411523 | intron-variant, synonymous-codon | USP2 | GRCh38.p7 | 11:119372893 | GTTCTCCAGGTAGTC[A/C/G]ACCAGGTATTCAGGG | 9099 |
rs35957161 | snp | A/G | 0.00206093 | 0.0320346 | intron-variant, missense | USP2 | GRCh38.p7 | 11:119373021 | AGCTATCTGAGGTCC[A/G]GAGGCTGGAGAAATC | 9099 |
rs36118584 | in-del | -/C | | | intron-variant, upstream-variant-2KB | USP2 | GRCh38.p7 | 11:119376420 | CCAATTGGCTGGGAT[-/C]CCCCCATACCCCTCC | 9099 |
rs45521440 | snp | A/G | 0.00557542 | 0.0525036 | intron-variant | USP2 | GRCh38.p7 | 11:119360301 | GTGCTGGGCTCTCTC[A/G]TGCAATTTCTAACCA | 9099 |
rs45533837 | snp | A/G | 0.0245332 | 0.108003 | missense | USP2 | GRCh38.p7 | 11:119359048 | TCGAGGTTCTCAGGG[A/G]TGGACTTAGGTCTCA | 9099 |
rs45539534 | snp | C/T | 0.402454 | 0.198136 | intron-variant, upstream-variant-2KB | USP2 | GRCh38.p7 | 11:119365482 | TGATCTCTACAGTCA[C/T]TGTCCTCACCCAGAC | 9099 |
rs45570535 | snp | A/T | 0.0147044 | 0.0844746 | intron-variant | USP2 | GRCh38.p7 | 11:119358886 | AGCTCAAAACTTAAG[A/T]TTAAGGGTCTGTCAA | 9099 |
rs45575137 | snp | A/G | 0.00636936 | 0.0560724 | intron-variant | USP2 | GRCh38.p7 | 11:119368835 | GAGAGGGTGGCCTGG[A/G]CAGGGTGGGGCAAGG | 9099 |