SNP - dbSNP |
dbSNP | Type | Alleles | Het | Se(het) | Fxn-class | Gene Name | Assembly | Chr-pos | Sequence | Entrez Gene |
rs2806 | snp | A/T | 0 | 0 | utr-variant-3-prime | HLTF | GRCh38.p7 | 3:149031252 | TGTAAACAATTGTTA[A/T]GTGTTTAGAATCAGA | 6596 |
rs746671 | snp | A/G | 0.294064 | 0.246086 | intron-variant | HLTF | GRCh38.p7 | 3:149071106 | AACACAGTTTTTCCT[A/G]TAGTTTTTAGTTAAA | 6596 |
rs751845 | snp | C/T | 0.407845 | 0.193868 | upstream-variant-2KB, intron-variant | HLTF, HLTF-AS1 | GRCh38.p7 | 3:149087266 | CTCAGAGCGCCCCTC[C/T]GCAGTTCCTTGAGGA | 6596 |
rs772813 | snp | A/G | 0.382279 | 0.212137 | intron-variant | HLTF | GRCh38.p7 | 3:149077204 | ctggagtgcaggggc[A/G]ctatcttggctcact | 6596 |
rs772814 | snp | C/T | 0.294064 | 0.246086 | intron-variant | HLTF | GRCh38.p7 | 3:149072136 | AGTGAGTAGTGTAAT[C/T]CTAGAGTTGATTTAT | 6596 |
rs772815 | snp | C/T | 0.294064 | 0.246086 | intron-variant | HLTF | GRCh38.p7 | 3:149068981 | aaacagttttgactt[C/T]gcattttcgtgaagg | 6596 |
rs772816 | snp | C/T | 0.364193 | 0.222396 | intron-variant, upstream-variant-2KB | HLTF, HLTF-AS1 | GRCh38.p7 | 3:149085892 | GCGCTAGTAGAGATA[C/T]GCGCCACTTGCAAGG | 6596 |
rs772817 | snp | C/T | 0.382279 | 0.212137 | intron-variant | HLTF | GRCh38.p7 | 3:149083285 | TTATTTTATAATTAA[C/T]GCATGTTCTTTTATT | 6596 |
rs810082 | snp | C/T | | | intron-variant | HLTF | GRCh38.p7 | 3:149079331 | gctggtctcaaactt[C/T]ttttgacagtttgat | 6596 |
rs812248 | snp | A/G | 0 | 0 | intron-variant | HLTF | GRCh38.p7 | 3:149079245 | cttcttatatgtgta[A/G]agtagtggtttccat | 6596 |
rs812249 | snp | A/G | 0.406591 | 0.194883 | synonymous-codon | HLTF | GRCh38.p7 | 3:149068321 | GGGTAAAACTCTTAC[A/G]GCCATTGCAGTAATC | 6596 |
rs812820 | snp | C/G | 0.293551 | 0.246177 | intron-variant | HLTF | GRCh38.p7 | 3:149082414 | tggagcgcagtggcg[C/G]gatctcggctcattg | 6596 |
rs813853 | snp | A/C | 0 | 0 | intron-variant | HLTF | GRCh38.p7 | 3:149079338 | tgcccaggctggtct[A/C]aaacttcttttgaca | 6596 |
rs975922 | snp | A/C/G | 0.0134861 | 0.0810011 | utr-variant-3-prime | HLTF | GRCh38.p7 | 3:149030894 | TTCAATGTGTGCCCT[A/C/G]TAACACAACATTGTC | 6596 |
rs1017489 | snp | C/T | 0.475096 | 0.108775 | intron-variant | HLTF | GRCh38.p7 | 3:149046303 | AACTTTTAATTTCTA[C/T]ATAAATTGATCCAAG | 6596 |
rs1042835 | snp | A/G | 0 | 0 | missense | HLTF | GRCh38.p7 | 3:149074284 | ACTTTTTGGGGAAAA[A/G]AAGAAAATAGAAAAG | 6596 |
rs1081819 | snp | A/T | 0.409721 | 0.192325 | intron-variant | HLTF | GRCh38.p7 | 3:149078323 | cctggcctcaagaga[A/T]cctcacacttcagcc | 6596 |
rs1272861 | snp | A/C | | | intron-variant | HLTF | GRCh38.p7 | 3:149043608 | TGTTGTCATTGTACC[A/C]CTGTATTTTGTATAA | 6596 |
rs1350359 | snp | A/T | 0.409552 | 0.192466 | intron-variant | HLTF | GRCh38.p7 | 3:149051236 | AATATAAGGAAGTTT[A/T]AAAAAAAAAAAAAAG | 6596 |
rs1457604 | snp | C/T | 0.29432 | 0.24604 | intron-variant | HLTF | GRCh38.p7 | 3:149040348 | ATGTGGTAAGTAGAA[C/T]GGATAAAGGAGGGAG | 6596 |
rs1457605 | snp | C/T | 0.00874735 | 0.0655527 | intron-variant | HLTF | GRCh38.p7 | 3:149043891 | TTATTTAATTTAATA[C/T]ATGTAAAGTATTTAA | 6596 |
rs1457606 | snp | A/T | 0.0894459 | 0.191631 | intron-variant | HLTF | GRCh38.p7 | 3:149075097 | TCTTAAATACAAAAA[A/T]CTTATTTTTCTCTTG | 6596 |
rs1879170 | snp | A/T | 0.000798403 | 0.0199641 | intron-variant | HLTF | GRCh38.p7 | 3:149072065 | CCCAAAAAATTAAGA[A/T]ATTGAAATTAAATTA | 6596 |
rs1965258 | snp | C/T | 0.431769 | 0.17164 | intron-variant | HLTF | GRCh38.p7 | 3:149051609 | CTCATGCCTGTAATC[C/T]CGGCACTTTGGGAGG | 6596 |
rs1965259 | snp | C/T | 0.00358779 | 0.0422022 | intron-variant | HLTF | GRCh38.p7 | 3:149051740 | GTGGTGATGGTGATG[C/T]GCACCTATAATTCCA | 6596 |
rs2034905 | snp | C/T | 0.0345262 | 0.126772 | intron-variant | HLTF | GRCh38.p7 | 3:149064459 | GTTGTATTTAAAATG[C/T]AATATGCATGGATAA | 6596 |
rs2034906 | snp | A/G | 0.382279 | 0.212137 | intron-variant | HLTF | GRCh38.p7 | 3:149054135 | TAAATTTGACAATTA[A/G]ACTATCACAAGTAGT | 6596 |
rs2054197 | snp | A/G | 0.432357 | 0.171014 | intron-variant | HLTF | GRCh38.p7 | 3:149045719 | ATCTTGCTTGGACCA[A/G]AATTTCATACCTTCT | 6596 |
rs2119341 | snp | A/C | | | utr-variant-3-prime, intron-variant | HLTF | GRCh38.p7 | 3:149031773 | AAAATTAATTCTTGT[A/C]TAGTCTGTATATATT | 6596 |
rs2119342 | snp | C/T | 0.40733 | 0.194287 | utr-variant-3-prime, intron-variant | HLTF | GRCh38.p7 | 3:149031834 | AATCGGAGGCTTTGG[C/T]AAATAACTAAGTGTC | 6596 |
rs2228257 | snp | C/G | 0.0133149 | 0.0804996 | missense | HLTF | GRCh38.p7 | 3:149063507 | GCATCTAGATGTAGT[C/G]AACAACCCAGTATTT | 6596 |
rs2229361 | snp | A/G | 0.0594826 | 0.161874 | missense | HLTF | GRCh38.p7 | 3:149040077 | CAGAAGAATTAGCAC[A/G]TGACAGTGAGAAAAA | 6596 |
rs2290725 | snp | C/T | 0.43424 | 0.168984 | synonymous-codon | HLTF | GRCh38.p7 | 3:149041538 | TTTACAAAATACATG[C/T]GCACAATGTGTTATC | 6596 |
rs2290726 | snp | A/C | 0.432063 | 0.171327 | intron-variant | HLTF | GRCh38.p7 | 3:149041773 | TAGGGAAAGTCTCTC[A/C]TCATTTTCTGCCATA | 6596 |
rs2305867 | snp | C/G/T | 0.000979748 | 0.0221119 | intron-variant | HLTF | GRCh38.p7 | 3:149040172 | CTATATAAGAAAGAA[C/G/T]GAAGTATGAGCAACA | 6596 |
rs2305868 | snp | A/G | 0.0535406 | 0.154608 | missense | HLTF | GRCh38.p7 | 3:149068298 | CAGTAATCCTTACCA[A/G]CTTCCATGATGGCAG | 6596 |
rs2607999 | snp | A/C | 0.410568 | 0.191619 | | | GRCh38.p7 | 3:149087754 | ACTAAAAATACAAAA[A/C]TTAGCTGGGCGTGGT | 6596 |
rs2608003 | snp | A/T | 0.404384 | 0.196635 | | | GRCh38.p7 | 3:149077284 | ttatttttatttatt[A/T]atttatttatttatt | 6596 |
rs2608004 | snp | A/T | 0.325799 | 0.238232 | | | GRCh38.p7 | 3:149077268 | atttatttatttatt[A/T]atttatttatttatt | 6596 |
rs2877411 | snp | C/T | 0.134119 | 0.221521 | intron-variant | HLTF | GRCh38.p7 | 3:149051695 | GCGAAACCCTGCCTC[C/T]ACTAAAAATACAAAA | 6596 |
rs3070552 | in-del | -/GTCTA | 0 | 0 | intron-variant | HLTF | GRCh38.p7 | 3:149047213 | AGTTGAACCACATTA[-/GTCTA]CATCTTGCAAAATGG | 6596 |
rs3070582 | in-del | -/AA | 0 | 0 | intron-variant | HLTF | GRCh38.p7 | 3:149083761 | tacaaaaaaaaaaaa[-/AA]tacaaaaattagctg | 6596 |
rs3182285 | snp | A/G | 0.424659 | 0.17887 | utr-variant-3-prime | HLTF | GRCh38.p7 | 3:149030593 | GTATGGGTTCTCCAT[A/G]TAGCAATACTTCAGT | 6596 |
rs3213908 | snp | A/G | 0.0103356 | 0.0711407 | utr-variant-3-prime, intron-variant | HLTF | GRCh38.p7 | 3:149031566 | AATGAGTGTAGTACT[A/G]CTTAACTAAAATGGA | 6596 |
rs3765075 | snp | C/T | | | synonymous-codon | HLTF | GRCh38.p7 | 3:149059719 | GGATATTTACTGACC[C/T]TTTTTCAACATTTTC | 6596 |
rs3772565 | snp | A/G | 0.3744 | 0.216852 | intron-variant | HLTF | GRCh38.p7 | 3:149053525 | TTTACAGGAAGTATC[A/G]TGCTGGCATCTGCTT | 6596 |
rs3816570 | snp | C/G | 0.487746 | 0.0773096 | intron-variant | HLTF | GRCh38.p7 | 3:149042498 | GCTGCCAATTGCAGT[C/G]TAAGTCAGATAGGAA | 6596 |
rs3836276 | in-del | -/T | 0.5 | 0 | intron-variant | HLTF | GRCh38.p7 | 3:149040436 | ATTGTTATTCATAGA[-/T]TTTTTTTTTTAAACT | 6596 |
rs4681479 | snp | A/C | 0.496034 | 0.0443518 | intron-variant | HLTF | GRCh38.p7 | 3:149052289 | TCTTTTTAAAAAATT[A/C]TATGTTGTATGGAAA | 6596 |
rs4681480 | snp | G/T | 0.405082 | 0.196086 | intron-variant | HLTF | GRCh38.p7 | 3:149069858 | tggaaaagttgtgtg[G/T]gacactatgaacata | 6596 |
rs4974388 | snp | C/G | 0.431916 | 0.171483 | intron-variant | HLTF | GRCh38.p7 | 3:149071154 | TCTAGTCCCAAACTG[C/G]TACCAACATATTCCT | 6596 |
rs6440581 | snp | C/G | 0.301429 | 0.244653 | intron-variant | HLTF | GRCh38.p7 | 3:149044564 | accatccacacatag[C/G]tgactttgaactcga | 6596 |
rs6440583 | snp | C/T | 0.431473 | 0.171952 | upstream-variant-2KB, intron-variant | HLTF, HLTF-AS1 | GRCh38.p7 | 3:149087412 | TGAGGAGGCTGCTGT[C/T]CCCGAAGCTGGCCTT | 6596 |
rs6764352 | snp | A/G | 0.0480316 | 0.147428 | intron-variant | HLTF | GRCh38.p7 | 3:149039038 | CTGAAAAAATTTACA[A/G]AACTACTTACTGGAT | 6596 |
rs6767681 | snp | A/C | | | intron-variant | HLTF | GRCh38.p7 | 3:149032976 | AAAAAAAAAAAAAAA[A/C]ACAAAAAACTATTCC | 6596 |
rs6771107 | snp | C/T | 0.424193 | 0.179323 | intron-variant | HLTF | GRCh38.p7 | 3:149062102 | ATATTCTTCAATGCC[C/T]GTTTCCTCATAAGAA | 6596 |
rs6772943 | snp | A/C | 0.0566069 | 0.158427 | upstream-variant-2KB, intron-variant | HLTF, HLTF-AS1 | GRCh38.p7 | 3:149087435 | CTGGCCTTTTAATCG[A/C]ACAGGGCAGGAAGCT | 6596 |
rs6783991 | snp | A/G | 0.0256215 | 0.110247 | intron-variant | HLTF | GRCh38.p7 | 3:149049993 | gcaaaactccatcGA[A/G]AGGGAGGGGGAGGGG | 6596 |
rs6792312 | snp | A/C | 0.5 | 0 | intron-variant | HLTF | GRCh38.p7 | 3:149032978 | AAAAAAAAAAAAAAA[A/C]AAAAAACTATTCCCA | 6596 |
rs6792730 | snp | A/C | 0.29432 | 0.24604 | intron-variant | HLTF | GRCh38.p7 | 3:149033468 | ATTTTCAAAAAGGGT[A/C]ATCAGAACATTTTAC | 6596 |
rs6796555 | snp | C/T | 0.495891 | 0.0451408 | intron-variant | HLTF | GRCh38.p7 | 3:149079836 | aacctcgtgatccac[C/T]caccttggcctccca | 6596 |
rs6800063 | snp | A/C | 0 | 0 | downstream-variant-500B | HLTF | GRCh38.p7 | 3:149029942 | AAGCACTCTTGATTT[A/C]TGAACAAGAATTTCA | 6596 |
rs6800629 | snp | A/G | 0.0275645 | 0.114116 | upstream-variant-2KB, intron-variant | HLTF, HLTF-AS1 | GRCh38.p7 | 3:149088292 | tcccagcactttggg[A/G]ggccgagttgggtgg | 6596 |
rs6809084 | snp | G/T | 0.279991 | 0.248195 | intron-variant | HLTF | GRCh38.p7 | 3:149037784 | ACAGAAACAGCAGAG[G/T]GTTGCCTTTAGCCCA | 6596 |
rs7611003 | snp | C/G | 0.00159617 | 0.0282053 | intron-variant | HLTF | GRCh38.p7 | 3:149044215 | AGCACTAAGATCAAT[C/G]TATAACACCTAGTGA | 6596 |
rs7611297 | snp | C/G | 0.0577344 | 0.159793 | intron-variant | HLTF | GRCh38.p7 | 3:149038739 | gctgctctcaaactc[C/G]tgagctcaggcaatc | 6596 |
rs7624263 | snp | A/G | 0.382473 | 0.212016 | intron-variant | HLTF | GRCh38.p7 | 3:149066204 | GGTATGCGCCACCAC[A/G]CCCAGCTAATTTTGT | 6596 |
rs7625832 | snp | C/T | 0.431473 | 0.171952 | intron-variant | HLTF | GRCh38.p7 | 3:149078741 | gggtgcctgtagtcc[C/T]agttactcgggaagc | 6596 |
rs7625894 | snp | A/G | 0.431916 | 0.171483 | intron-variant | HLTF | GRCh38.p7 | 3:149054481 | CCTCTGACATAAGAA[A/G]AATGGCGATGAGAGA | 6596 |
rs7635712 | snp | C/T | 0.424503 | 0.179021 | intron-variant | HLTF | GRCh38.p7 | 3:149052077 | caggatcacttgaac[C/T]tgggaggtggaggtt | 6596 |
rs7637603 | snp | C/T | 0.452103 | 0.147154 | intron-variant | HLTF | GRCh38.p7 | 3:149054668 | ATTCCAATGTCAATG[C/T]TTCAGAACAGAAAAG | 6596 |
rs9289779 | snp | G/T | 0.372592 | 0.217879 | intron-variant | HLTF | GRCh38.p7 | 3:149066822 | ATAAAACATTAGGTT[G/T]CTCAGGGTGAGGAAT | 6596 |
rs9683270 | snp | A/G | 0.432063 | 0.171327 | intron-variant | HLTF | GRCh38.p7 | 3:149046756 | CCCCAAAATAAAAAG[A/G]TAATATGGTAATTCA | 6596 |
rs9822226 | snp | A/G | 0.406986 | 0.194565 | intron-variant | HLTF | GRCh38.p7 | 3:149060303 | AATGTAAACAATAAT[A/G]GTATTGCCAGGAAGA | 6596 |
rs9834138 | snp | A/C | 0.489796 | 0.070696 | intron-variant | HLTF | GRCh38.p7 | 3:149032971 | TCAAAAAAAAAAAAA[A/C]AAAAAACAAAAAACT | 6596 |
rs9835785 | snp | C/T | 0.382473 | 0.212016 | intron-variant | HLTF | GRCh38.p7 | 3:149080928 | ATGACAGACCACATG[C/T]ATTATGCAACAGTTG | 6596 |
rs9850529 | snp | A/G | 0.406986 | 0.194565 | intron-variant | HLTF | GRCh38.p7 | 3:149058824 | TGTGACTTTGAAAAT[A/G]TTCTCTCTTGTATCA | 6596 |
rs9864549 | snp | A/C | 0.3746 | 0.216737 | intron-variant | HLTF | GRCh38.p7 | 3:149044028 | TAGGCAAAATAATAC[A/C]AAGATTAAACTTACA | 6596 |
rs10513347 | snp | C/T | 0.111224 | 0.207945 | utr-variant-3-prime | HLTF | GRCh38.p7 | 3:149030729 | CCTGCAGAAAGGTCT[C/T]GGTTTTGATGAAAAT | 6596 |
rs10513348 | snp | A/G | 0.43221 | 0.171171 | intron-variant | HLTF | GRCh38.p7 | 3:149038074 | GATCCTAGACCACCT[A/G]TACCTCAATCACCTA | 6596 |
rs10513349 | snp | A/G | 0.409382 | 0.192607 | intron-variant | HLTF | GRCh38.p7 | 3:149065156 | AAATGACACATTATT[A/G]TGAGAAAAATTCAAG | 6596 |
rs10550068 | in-del | -/G | 0.5 | 0 | upstream-variant-2KB, intron-variant | HLTF, HLTF-AS1 | GRCh38.p7 | 3:149087584 | TTTTTTCTTTTTTTT[-/G]TTTTTTCTTTTTTAT | 6596 |
rs10651075 | in-del | -/GTC | | | utr-variant-3-prime | HLTF | GRCh38.p7 | 3:149030478 | AAGAAGCAAGCTGTC[-/GTC]CTCCCTTTACCTTCA | 6596 |
rs10935740 | snp | C/G | 0.0255019 | 0.110003 | intron-variant | HLTF | GRCh38.p7 | 3:149073333 | TAAAGCTATAATTTA[C/G]AAAATAAAAAGAATA | 6596 |
rs11306648 | in-del | -/A | 0.424659 | 0.17887 | intron-variant | HLTF | GRCh38.p7 | 3:149033371 | AATAATAAATTCAAT[-/A]AATCTCAAGATATCT | 6596 |
rs11559143 | snp | C/G | 0 | 0 | missense, upstream-variant-2KB | HLTF, HLTF-AS1 | GRCh38.p7 | 3:149084818 | CACGCCTCTCATATC[C/G]AACTTTCTTTCCACG | 6596 |
rs11710438 | snp | A/G | 0.495999 | 0.0445491 | intron-variant | HLTF | GRCh38.p7 | 3:149067547 | tcacagtgtcactga[A/G]ggtggagtgcaatag | 6596 |
rs11715474 | snp | G/T | 0.495891 | 0.0451408 | intron-variant | HLTF | GRCh38.p7 | 3:149084128 | CATAAAATGCCACAA[G/T]TATGAAAATATAAAA | 6596 |
rs11917715 | snp | C/T | 0 | 0 | intron-variant | HLTF | GRCh38.p7 | 3:149078961 | Caccaaacagcaatt[C/T]tagagtcaaaaggta | 6596 |
rs11918527 | snp | C/G/T | 0.000399281 | 0.0141238 | intron-variant | HLTF | GRCh38.p7 | 3:149079080 | ttgagattatacaat[C/G/T]taaggaacaaaaaaa | 6596 |
rs11918628 | snp | C/T | 0 | 0 | intron-variant | HLTF | GRCh38.p7 | 3:149079372 | gggtaacgacagttt[C/T]taaaaaaaaaaaaaa | 6596 |
rs11926206 | snp | A/C | 0.00952359 | 0.0683454 | intron-variant | HLTF | GRCh38.p7 | 3:149079159 | cacatacataagagt[A/C]ccataaggagaaaag | 6596 |
rs12106722 | snp | C/T | 0.371177 | 0.218669 | intron-variant | HLTF | GRCh38.p7 | 3:149065698 | AGCCAGGCATGGTGG[C/T]GGGCACCTGTAATCC | 6596 |
rs12152447 | snp | A/G | 0.0364509 | 0.129988 | intron-variant | HLTF | GRCh38.p7 | 3:149078102 | attatttaaaatgtc[A/G]atttttcaagaaaaa | 6596 |
rs12488819 | snp | C/T | 0.45198 | 0.147323 | intron-variant | HLTF | GRCh38.p7 | 3:149049329 | CACTGAACTGTTCTA[C/T]CTCGGATTAAAACAT | 6596 |
rs12488889 | snp | G/T | 0.431916 | 0.171483 | intron-variant | HLTF | GRCh38.p7 | 3:149049370 | TAGAAAATGGCAGTT[G/T]TAAGAATTACTTGAA | 6596 |
rs12490157 | snp | C/T | 0.406986 | 0.194565 | intron-variant | HLTF | GRCh38.p7 | 3:149036692 | GAGGCTGAGGGAGGA[C/T]TGCTTGAGCTCAGGA | 6596 |
rs12634247 | snp | C/T | 0.406986 | 0.194565 | intron-variant | HLTF | GRCh38.p7 | 3:149043813 | aggttgcttaaccta[C/T]gtcttgagcttcctc | 6596 |
rs13062076 | snp | A/C | | | intron-variant | HLTF | GRCh38.p7 | 3:149065646 | actagcctggccaac[A/C]cagcaaaaccctgtc | 6596 |
rs13062476 | snp | A/G | | | intron-variant | HLTF | GRCh38.p7 | 3:149065639 | gctcgagactagcct[A/G]gccaacacagcaaaa | 6596 |