SNP - dbSNP |
dbSNP | Type | Alleles | Het | Se(het) | Fxn-class | Gene Name | Assembly | Chr-pos | Sequence | Entrez Gene |
rs15834 | snp | G/T | 0.282632 | 0.247861 | intron-variant, utr-variant-3-prime | LNX1, FIP1L1 | GRCh38.p7 | 4:53462504 | TATATAAACAAAATA[G/T]CCATATCTGATTTTT | 84708 |
rs366074 | snp | C/G | 0.305685 | 0.24372 | intron-variant | LNX1 | GRCh38.p7 | 4:53565967 | AGAATAAAAAGAAAC[C/G]AGCAAAGCCTCCAAG | 84708 |
rs716251 | snp | A/T | 0.265727 | 0.249505 | intron-variant | LNX1 | GRCh38.p7 | 4:53555893 | GTAGAAGAGAAAATT[A/T]TTAAGTGGTATAAGG | 84708 |
rs727943 | snp | A/C | 0.248784 | 0.253684 | intron-variant | LNX1 | GRCh38.p7 | 4:53556272 | AGGAACACCTGCAGC[A/C]CCCCCCTCCACAAAA | 84708 |
rs750695 | snp | A/G | 0.499631 | 0.0135733 | intron-variant | LNX1 | GRCh38.p7 | 4:53637601 | TTGTTTCATTACTAC[A/G]GAATTTCATCACTTC | 84708 |
rs769072 | snp | A/C | 0 | 0 | intron-variant | LNX1 | GRCh38.p7 | 4:53530816 | CAAATTACATAGTGT[A/C]TAGAATTTGCTTTAA | 84708 |
rs907505 | snp | A/G | 0 | 0 | intron-variant | LNX1 | GRCh38.p7 | 4:53637616 | ccctttggcatctta[A/G]aagtgatgaaatTCT | 84708 |
rs907506 | snp | G/T | 0.0825414 | 0.185628 | intron-variant | LNX1 | GRCh38.p7 | 4:53531376 | TTTTCCAGAGCCACA[G/T]TCCTCTCATCTATAA | 84708 |
rs907509 | snp | A/C | 0.418007 | 0.185132 | intron-variant | LNX1 | GRCh38.p7 | 4:53587231 | CTTTCTGTGTTTACC[A/C]TTTCCTCCATTTTGT | 84708 |
rs907510 | snp | G/T | 0.28052 | 0.24813 | intron-variant | LNX1-AS2, LNX1 | GRCh38.p7 | 4:53603251 | GACTCCTCACTGCAT[G/T]TGAGGACCTACTCAT | 84708 |
rs907511 | snp | G/T | 0.38286 | 0.211774 | intron-variant | LNX1 | GRCh38.p7 | 4:53572599 | GAAATTTGGAAGATG[G/T]TGTTTATCCTGGTTC | 84708 |
rs925477 | snp | C/T | 0.38286 | 0.211774 | intron-variant | LNX1-AS2, LNX1 | GRCh38.p7 | 4:53596501 | TGTTTATAATGGTCA[C/T]GAGACCTATATCTTA | 84708 |
rs925664 | snp | A/C | 0.00835141 | 0.0640778 | intron-variant | LNX1, LNX1-AS1 | GRCh38.p7 | 4:53519046 | ATGAGGCATGCAGCA[A/C]TGATAAATGGCCCTG | 84708 |
rs932038 | snp | A/G | 0.0267878 | 0.112589 | intron-variant | LNX1 | GRCh38.p7 | 4:53585079 | TTCACTTCCAGGTAC[A/G]GGTTTTCAAAGGGAC | 84708 |
rs932039 | snp | A/G | 0.220843 | 0.248294 | intron-variant | LNX1 | GRCh38.p7 | 4:53585008 | CCATCTGGACTACCC[A/G]GGAAGACAATTGGAA | 84708 |
rs932040 | snp | A/T | 0.35574 | 0.226537 | intron-variant | LNX1 | GRCh38.p7 | 4:53582727 | GCATCATCAACAATT[A/T]AAAAAAAAACAAAAA | 84708 |
rs959094 | snp | C/T | 0.460813 | 0.134379 | intron-variant | LNX1 | GRCh38.p7 | 4:53617402 | TCCCAAAGTAAATTT[C/T]CTTTTCTGGATATTA | 84708 |
rs967018 | snp | A/G | 0.128632 | 0.218563 | intron-variant | LNX1 | GRCh38.p7 | 4:53478244 | TCTAAGTGGTTCTTT[A/G]GTGGGTTGATCCGGT | 84708 |
rs979006 | snp | A/G | 0.247905 | 0.249991 | intron-variant | LNX1 | GRCh38.p7 | 4:53586711 | AAGAAGGGCAAAGGC[A/G]AAGAGAACAAGAGTA | 84708 |
rs1002824 | snp | A/C | 0.391769 | 0.205917 | intron-variant | LNX1 | GRCh38.p7 | 4:53579813 | AGTTGCCAGAATAAA[A/C]CACATACTCCACTAG | 84708 |
rs1013928 | snp | A/C | 0.499784 | 0.0103811 | intron-variant | LNX1 | GRCh38.p7 | 4:53649344 | GTCAATCCCACAAGG[A/C]GACTACTATTACAAT | 84708 |
rs1014056 | snp | C/T | 0.337841 | 0.23406 | intron-variant, utr-variant-3-prime, downstream-variant-500B | LNX1, FIP1L1 | GRCh38.p7 | 4:53459823 | TCTTAAGAGGCTGCA[C/T]CACAAAAGGCAACAA | 84708 |
rs1015801 | snp | A/G | 0.240478 | 0.249819 | intron-variant | LNX1-AS2, LNX1 | GRCh38.p7 | 4:53595381 | AGTCAACAGGCATGT[A/G]AGGACATGAAGCAGT | 84708 |
rs1022187 | snp | C/G | 0.306431 | 0.243548 | intron-variant | LNX1 | GRCh38.p7 | 4:53651408 | TGGGCATTGAATTCA[C/G]TTCAACAAATGTCGA | 84708 |
rs1028000 | snp | C/T | 0.354665 | 0.227036 | intron-variant | LNX1-AS2, LNX1 | GRCh38.p7 | 4:53594364 | GGTCATTTTTCTCTG[C/T]AACTTCTGCGGCCTA | 84708 |
rs1036379 | snp | A/G | 0.117188 | 0.211804 | intron-variant | LNX1 | GRCh38.p7 | 4:53553659 | CATGGAGGTCTGCGG[A/G]TGAGGGCATGTGGGG | 84708 |
rs1040084 | snp | A/G | 0.361684 | 0.223667 | intron-variant | LNX1 | GRCh38.p7 | 4:53544057 | GTCTTCTTCACCTTC[A/G]CTGTCCTATTTTTGA | 84708 |
rs1077966 | snp | C/T | 0.251296 | 0.249997 | intron-variant | LNX1 | GRCh38.p7 | 4:53651174 | TGGACTTGGTGTAAG[C/T]AAATGTTCACTCAAC | 84708 |
rs1125349 | snp | A/G | 0.499776 | 0.0105807 | intron-variant | LNX1 | GRCh38.p7 | 4:53649343 | TGTCAATCCCACAAG[A/G]CGACTACTATTACAA | 84708 |
rs1126328 | snp | C/T | 0.268452 | 0.249318 | intron-variant | LNX1-AS2, LNX1 | GRCh38.p7 | 4:53595556 | TTAGGAGCAAGCCTC[C/T]TTTGCAGTCAACATA | 84708 |
rs1212751 | snp | A/G | 0 | 0 | intron-variant | LNX1, LNX1-AS1 | GRCh38.p7 | 4:53510973 | AGATTATGCCATTAA[A/G]AAACCATTGCACTTT | 84708 |
rs1347406 | snp | A/G | 0.402277 | 0.198272 | intron-variant | LNX1 | GRCh38.p7 | 4:53586320 | CACGTGACTGTCAAA[A/G]GCAGTCATAAGCAAG | 84708 |
rs1369351 | snp | C/T | 0.269267 | 0.249256 | intron-variant | LNX1-AS2, LNX1 | GRCh38.p7 | 4:53596785 | CATCCCTGACTTCCC[C/T]CTATTATAATGACAA | 84708 |
rs1369352 | snp | C/G | 0.370772 | 0.218893 | intron-variant | LNX1 | GRCh38.p7 | 4:53530885 | TGAGTCACTATGCCT[C/G]GCCTCATTTTACAAT | 84708 |
rs1369353 | snp | A/G | 0.447032 | 0.153878 | intron-variant | LNX1 | GRCh38.p7 | 4:53530794 | TGTAATTTGACCCTG[A/G]AATACTTAAACAAAA | 84708 |
rs1369354 | snp | A/C | 0.403334 | 0.197456 | intron-variant | LNX1 | GRCh38.p7 | 4:53581807 | ATCAAAAACAAGATG[A/C]GTGATATGGTTTGGC | 84708 |
rs1369355 | snp | C/T | 0.402806 | 0.197864 | intron-variant | LNX1 | GRCh38.p7 | 4:53580693 | CACCTAATGCCACTA[C/T]ATATTTTTGCATTTT | 84708 |
rs1398157 | snp | A/C | 0.0209421 | 0.100162 | intron-variant | LNX1 | GRCh38.p7 | 4:53524716 | TTTAGGGGAAATAAA[A/C]ATAGTTGAGCCATTT | 84708 |
rs1398158 | snp | A/G | 0.0912534 | 0.193131 | intron-variant | LNX1 | GRCh38.p7 | 4:53526202 | AAACCCCATCACTGG[A/G]CACGGCACACTGCTC | 84708 |
rs1399241 | snp | C/T | 0.455977 | 0.141681 | intron-variant | LNX1 | GRCh38.p7 | 4:53483140 | ATCTCGAGAACAGCA[C/T]GGGAAAGACCCACCC | 84708 |
rs1435210 | snp | C/T | 0.0869089 | 0.189476 | intron-variant | LNX1, LNX1-AS1 | GRCh38.p7 | 4:53513277 | ATGTATTATGCTTTA[C/T]GGATGTGGTCTCATT | 84708 |
rs1435211 | snp | A/G | 0.275464 | 0.2487 | intron-variant | LNX1, LNX1-AS1 | GRCh38.p7 | 4:53513278 | TGTATTATGCTTTAT[A/G]GATGTGGTCTCATTT | 84708 |
rs1435212 | snp | C/G | 0.0894459 | 0.191631 | intron-variant | LNX1, LNX1-AS1 | GRCh38.p7 | 4:53513353 | ATGAAGATATGGACA[C/G]TAGAAGGGAGAAATG | 84708 |
rs1435213 | snp | A/C | 0.0955749 | 0.196603 | intron-variant | LNX1, LNX1-AS1 | GRCh38.p7 | 4:53514905 | GAACATTTAACTGAC[A/C]AATTAGGCTAAACAT | 84708 |
rs1435214 | snp | A/G | 0.000798403 | 0.0199641 | intron-variant | LNX1 | GRCh38.p7 | 4:53590733 | TGTAACCAAAGGTCA[A/G]CAGGCAGCCAGTCCA | 84708 |
rs1435215 | snp | C/T | 0.334871 | 0.235153 | intron-variant | LNX1 | GRCh38.p7 | 4:53545367 | TTCACACCTTTATAA[C/T]TCAGTAGGGCCAGGT | 84708 |
rs1435216 | snp | C/T | 0.0275645 | 0.114116 | intron-variant | LNX1 | GRCh38.p7 | 4:53545221 | TCCTAGTTTGTATAA[C/T]TATTTTCCCATTGAA | 84708 |
rs1435217 | snp | C/T | 0.0275645 | 0.114116 | intron-variant | LNX1 | GRCh38.p7 | 4:53545210 | ATAACTATTTTCCCA[C/T]TGAAGTAGGCATAAG | 84708 |
rs1435218 | snp | A/G | 0.159951 | 0.233219 | intron-variant | LNX1 | GRCh38.p7 | 4:53535732 | GCAGGGAATAGACTA[A/G]GAAGTACATGGCATA | 84708 |
rs1435219 | snp | C/T | 0.45692 | 0.1403 | intron-variant | LNX1 | GRCh38.p7 | 4:53535682 | AGCCAAGAAACTCAA[C/T]TCATTTCCCTGGCTC | 84708 |
rs1435220 | snp | A/G | 0.333952 | 0.235483 | intron-variant | LNX1 | GRCh38.p7 | 4:53535586 | ACATTTACCTCTGAG[A/G]ACATTAATGCAGAGT | 84708 |
rs1435221 | snp | C/T | 0.44651 | 0.154543 | intron-variant | LNX1 | GRCh38.p7 | 4:53532609 | GAGGAGAATTTCCTA[C/T]GGGGACTATCAAAAT | 84708 |
rs1435222 | snp | A/G | 0.489492 | 0.0717183 | intron-variant | LNX1 | GRCh38.p7 | 4:53530223 | TGTATATTTTAAAAC[A/G]TTACTTAAAAATAAT | 84708 |
rs1435223 | snp | A/T | 0.31503 | 0.241394 | intron-variant | LNX1 | GRCh38.p7 | 4:53530046 | TAATTTTTACTTGAT[A/T]AAACATATCAAACTT | 84708 |
rs1435224 | snp | C/T | 0.0901694 | 0.192235 | intron-variant | LNX1, LNX1-AS1 | GRCh38.p7 | 4:53510076 | GACAAGCAAATGTTT[C/T]ATCTGCTTAGAAAGA | 84708 |
rs1435225 | snp | C/T | 0.380333 | 0.213338 | intron-variant, utr-variant-3-prime | LNX1, LOC101928879 | GRCh38.p7 | 4:53577610 | CTGGTCAACATAGCA[C/T]GACCCCATCTTTAAA | 84708 |
rs1464028 | snp | A/C | 0.406814 | 0.194704 | intron-variant | LNX1-AS2, LNX1 | GRCh38.p7 | 4:53594657 | TAGCAGTTGGTTTTA[A/C]CCCCCAAGATCAAAC | 84708 |
rs1467156 | snp | G/T | 0.497121 | 0.0378299 | intron-variant | LNX1 | GRCh38.p7 | 4:53472685 | gtttttttttttttt[G/T]ttgttgttgttgttg | 84708 |
rs1477873 | snp | A/C | 0.0532157 | 0.154195 | intron-variant | LNX1 | GRCh38.p7 | 4:53644659 | AGTCACCTGACATGG[A/C]ATCCCGCTCCCTCCT | 84708 |
rs1477875 | snp | A/G | 0.302435 | 0.244439 | intron-variant | LNX1 | GRCh38.p7 | 4:53626338 | GGTTGCATAACCCTC[A/G]TATAATAAATATACT | 84708 |
rs1477876 | snp | C/T | 0.279195 | 0.248289 | intron-variant | LNX1 | GRCh38.p7 | 4:53616053 | AGAGTCTTGGAAGGA[C/T]GGGGGTGGTGAGGAG | 84708 |
rs1514387 | snp | A/C | 0.126909 | 0.217598 | intron-variant | LNX1 | GRCh38.p7 | 4:53483865 | ATAGCAGGCAGGAAG[A/C]AAATATCTCCACCAC | 84708 |
rs1514388 | snp | A/C | 0.126909 | 0.217598 | intron-variant | LNX1 | GRCh38.p7 | 4:53483851 | GAAAATATCTCCACC[A/C]CCATTGTCTGAGTCA | 84708 |
rs1514389 | snp | C/G | 0.128288 | 0.218372 | intron-variant | LNX1 | GRCh38.p7 | 4:53483832 | TTGTCTGAGTCAATG[C/G]AAAAGAGCATGGAAT | 84708 |
rs1541967 | snp | G/T | 0.468949 | 0.12067 | intron-variant | LNX1, LNX1-AS1 | GRCh38.p7 | 4:53515952 | ATTTACCATGAGGTT[G/T]AAAGATTCGCACAAA | 84708 |
rs1546526 | snp | A/G | 0.293551 | 0.246177 | intron-variant | LNX1 | GRCh38.p7 | 4:53633084 | GATTTAAGCAGCTAA[A/G]AAGTGATGATGTTGG | 84708 |
rs1546527 | snp | C/G | 0.445855 | 0.155373 | intron-variant | LNX1 | GRCh38.p7 | 4:53631120 | CTTAACTCCATGGGC[C/G]ACTTCCTCCTCCTCT | 84708 |
rs1567654 | snp | A/G | 0.421209 | 0.182174 | intron-variant | LNX1 | GRCh38.p7 | 4:53582010 | AAAATTTAAGGTGCA[A/G]AAAAATTCAGTAATC | 84708 |
rs1812717 | snp | C/T | 0.474634 | 0.109726 | intron-variant | LNX1 | GRCh38.p7 | 4:53526887 | AAACATCGTGAGCCT[C/T]CTGTGGAGCCAGCTG | 84708 |
rs1858389 | snp | A/C | 0.0908922 | 0.192833 | intron-variant | LNX1 | GRCh38.p7 | 4:53524782 | CAGTAGCTGGATGTT[A/C]AATTCCTCAGTTCCT | 84708 |
rs1865509 | snp | C/T | 0.0887219 | 0.191022 | intron-variant | LNX1, LNX1-AS1 | GRCh38.p7 | 4:53512976 | CCAACTCCATCTCCA[C/T]GGCCAAACCCTGGAG | 84708 |
rs1865510 | snp | A/G | 0.208779 | 0.246578 | intron-variant | LNX1 | GRCh38.p7 | 4:53488659 | TCCAAAAACTCAATC[A/G]ATTCCTGTCTTTACC | 84708 |
rs1903827 | snp | C/T | 0.000399281 | 0.0141238 | intron-variant | LNX1 | GRCh38.p7 | 4:53634600 | TTTCCTCTGGGAGTA[C/T]CATCTCTACTGGTGG | 84708 |
rs1913484 | snp | A/G | 0.43978 | 0.162738 | intron-variant | LNX1 | GRCh38.p7 | 4:53544157 | TTGAGAGCAGTACAT[A/G]GAAATTAGTAAGCAC | 84708 |
rs1913485 | snp | A/G | 0.43655 | 0.16643 | intron-variant | LNX1 | GRCh38.p7 | 4:53544264 | CAGTGGTGCCATCTC[A/G]GCTCACTGCAGCCTC | 84708 |
rs1913486 | snp | A/C | 0.327445 | 0.237702 | intron-variant | LNX1 | GRCh38.p7 | 4:53544426 | TCTCAAACTACTGAA[A/C]TCAGGTGATCCACCC | 84708 |
rs1965112 | snp | A/G | 0.349452 | 0.229367 | intron-variant | LNX1 | GRCh38.p7 | 4:53620628 | GAAATCCGGGACTTC[A/G]GTGCATCCATCAGTG | 84708 |
rs1972815 | snp | A/G | 0.324382 | 0.238678 | intron-variant | LNX1 | GRCh38.p7 | 4:53620367 | gatcccactcccagc[A/G]tttgtaattctttac | 84708 |
rs1978767 | snp | A/G | 0.334182 | 0.235401 | intron-variant | LNX1 | GRCh38.p7 | 4:53534601 | agactagagtacagt[A/G]gtgtgaccatagctc | 84708 |
rs1991972 | snp | A/C | 0.487113 | 0.0792303 | intron-variant | LNX1 | GRCh38.p7 | 4:53636286 | ACAAAACTTCATTGT[A/C]TTGAAAAAATTAGCA | 84708 |
rs1991973 | snp | A/G | 0.499295 | 0.0187567 | intron-variant | LNX1 | GRCh38.p7 | 4:53636319 | CACCTCCTTCCACAC[A/G]TCACTGTGGTAAGAA | 84708 |
rs1996005 | snp | A/T | 0.294576 | 0.245994 | intron-variant | LNX1 | GRCh38.p7 | 4:53640828 | AACCTCTTGTGAGAA[A/T]TAGTCAATGCACAAT | 84708 |
rs2033618 | snp | A/G | 0.00478085 | 0.0486577 | intron-variant | LNX1-AS2, LNX1 | GRCh38.p7 | 4:53602631 | TTACACGTGGTGACT[A/G]AACTAATGAAGTAGC | 84708 |
rs2048511 | snp | C/T | 0.283684 | 0.24772 | intron-variant | LNX1-AS2, LNX1 | GRCh38.p7 | 4:53595776 | GATCCCCCCATGAAG[C/T]TTGGCGTTCTCAAGG | 84708 |
rs2048709 | snp | C/T | 0.338363 | 0.233863 | intron-variant, downstream-variant-500B, utr-variant-3-prime | LNX1, FIP1L1 | GRCh38.p7 | 4:53460228 | GCATGAGTTTTTATA[C/T]AGTTACTAACGATTG | 84708 |
rs2048710 | snp | A/G | 0.363985 | 0.222503 | intron-variant | LNX1 | GRCh38.p7 | 4:53540466 | CTTGTAAGAAAGCTT[A/G]TTAAAAATAAGTGTT | 84708 |
rs2082768 | snp | A/G | 0.0391387 | 0.134304 | intron-variant | LNX1 | GRCh38.p7 | 4:53564544 | aataattattcccca[A/G]agatgtccagctcct | 84708 |
rs2082769 | snp | C/T | 0.0391387 | 0.134304 | intron-variant | LNX1 | GRCh38.p7 | 4:53564548 | attattccccagaga[C/T]gtccagctcctaatc | 84708 |
rs2099452 | snp | C/T | 0.227959 | 0.249026 | upstream-variant-2KB, intron-variant | LNX1, LNX1-AS2 | GRCh38.p7 | 4:53592914 | GCCGGCTCTGGTGCT[C/T]GACCTCAGGGGAGCT | 84708 |
rs2099453 | snp | C/T | 0.494855 | 0.0504572 | intron-variant | LNX1 | GRCh38.p7 | 4:53564319 | ACAGAGTTCCAACAG[C/T]CACCTGCTAGCCCTT | 84708 |
rs2117596 | snp | A/G | 0.0898077 | 0.191933 | intron-variant | LNX1, LNX1-AS1 | GRCh38.p7 | 4:53511450 | ACTAAGTACTCTCAG[A/G]TGGTGATGGGTGATG | 84708 |
rs2117597 | snp | A/G | 0.0894459 | 0.191631 | intron-variant | LNX1, LNX1-AS1 | GRCh38.p7 | 4:53511521 | CCCTTTTCAACCAAA[A/G]CACAAGCTTTGGAGG | 84708 |
rs2117598 | snp | A/C | 0.0894459 | 0.191631 | intron-variant | LNX1, LNX1-AS1 | GRCh38.p7 | 4:53511808 | TTCTGATAGGGTATC[A/C]TCTGCAAAGGTCACC | 84708 |
rs2117599 | snp | A/G | 0.478271 | 0.101943 | intron-variant | LNX1-AS2, LNX1 | GRCh38.p7 | 4:53599120 | TGGCATGTGAACCAG[A/G]GCAATTCATCTTGAA | 84708 |
rs2117600 | snp | A/G | 0.487432 | 0.0782705 | intron-variant | LNX1 | GRCh38.p7 | 4:53551507 | GTATATGAATCCTCA[A/G]CTGATAAGGAGAAAA | 84708 |
rs2117601 | snp | A/G | 0.43309 | 0.17023 | intron-variant | LNX1 | GRCh38.p7 | 4:53551705 | aaggtcaaaccaccc[A/G]gctgatctcaagtca | 84708 |
rs2137896 | snp | C/G | 0.0505692 | 0.150756 | intron-variant | LNX1 | GRCh38.p7 | 4:53482600 | tgattttccattcct[C/G]tgttacttcacttaa | 84708 |
rs2164265 | snp | A/G | 0.275464 | 0.2487 | intron-variant | LNX1, LNX1-AS1 | GRCh38.p7 | 4:53511373 | AGGACAAGAACATAC[A/G]GTAAACCCTGGGTTG | 84708 |
rs2164266 | snp | G/T | 0.288646 | 0.246995 | intron-variant | LNX1 | GRCh38.p7 | 4:53630096 | ATTAAAAAAAGGTGG[G/T]GGGGGCATGCGGGTG | 84708 |
rs2164267 | snp | C/T | | | intron-variant | LNX1 | GRCh38.p7 | 4:53636590 | GTGTCAAAACAGTTA[C/T]ACAAAATGACCAGCA | 84708 |