Disease associated variation - ClinVar | Allele ID | Type | Name | RS#dbSNP | Phenotype IDs | Chromosome | Start | Stop | Reference | Alternate | 171307 | deletion | NM_014458.3(KLHL20):c.254delT (p.Leu86Cysfs) | 193920902 | MedGen:C0376358,OMIM:176807,SNOMED CT:C0376358 | 1 | 173733943 | 173733943 | T | - | 171307 | deletion | NM_014458.3(KLHL20):c.254delT (p.Leu86Cysfs) | 193920902 | MedGen:C0376358,OMIM:176807,SNOMED CT:C0376358 | 1 | 173703082 | 173703082 | T | - | |
Disease associated variation - GWASdb | Chr | Pos | SNP ID(dbSNP 142) | Ref | Alt | Ori SNP ID | P-value | Drug Name | Drug Anno | GWAS Trait | HPO ID | DO ID | AA | Type | Trait or Drug | 1 | 173689891 | rs10912671 | A | G | rs10912671 | 1.87E-04 | | | Type 2 diabetes | HPOID:0005978 | DOID:9352 | G | intron | GWASdb_trait | 1 | 173722545 | rs6425256 | A | G | rs6425256 | 5.62E-04 | | | Multiple complex diseases | HPOID:0000118 | NA | A | intron | GWASdb_trait | 1 | 173725101 | rs16846395 | G | A | rs16846395 | 1.28E-05 | | | Multiple complex diseases | HPOID:0000118 | NA | G | cds-synon | GWASdb_trait | 1 | 173725376 | rs16846398 | C | G | rs16846398 | 5.65E-04 | | | Multiple complex diseases | HPOID:0000118 | NA | C | intron | GWASdb_trait | 1 | 173735378 | rs7536773 | T | C | rs7536773 | 1.44E-05 | | | Age-related macular degeneration | HPOID:0007868 | DOID:10871 | C | cds-synon | GWASdb_trait | 1 | 173754505 | rs6692452 | A | G | rs6692452 | 1.44E-05 | | | Age-related macular degeneration | HPOID:0007868 | DOID:10871 | G | UTR-3 | GWASdb_trait | |
Disease associated variation - GWAS Central | Study Name | Source Marker Accession | Chromosome | Marker Start | Marker Stop | Alleles | Gene Section | P-value | -log(p-value) | GWAS of prostate cancer | rs11578058 | 1 | 173713130 | 173713130 | | intronic | 0.917494 | 0.0373967671580656 | GWAS of prostate cancer | rs2273366 | 1 | 173724942 | 173724942 | | intronic | 0.412153 | 0.384941534644241 | |