Mutation - TCGA |
Type | Chromosome | Start Position | End Position | Strand | Variant Classification | Variant Type | Reference Allele | Tumor_seq Allele 1 | Tumor_seq Allele 2 | Tumor Sample Barcode | Matched Norm Sample Barcode | Genome Change | cDNA Change | Codon Change | Protein Change |
BLCA | 4 | 39779392 | 39779392 | + | Frame_Shift_Del | DEL | A | A | - | TCGA-DK-A3IU-01A-11D-A20D-08 | TCGA-DK-A3IU-10A-01D-A20D-08 | g.chr4:39779392delA | c.490delA | c.(490-492)aaafs | p.K165fs |
BLCA | 4 | 39779401 | 39779401 | + | Missense_Mutation | SNP | G | G | A | TCGA-GU-A767-01A-11D-A32B-08 | TCGA-GU-A767-10A-01D-A329-08 | g.chr4:39779401G>A | c.499G>A | c.(499-501)Gaa>Aaa | p.E167K |
COAD | 4 | 39757280 | 39757280 | + | Missense_Mutation | SNP | C | C | T | TCGA-AU-6004-01A-11D-1719-10 | TCGA-AU-6004-10A-01D-1719-10 | g.chr4:39757280C>T | c.220C>T | c.(220-222)Cgg>Tgg | p.R74W |
COAD | 4 | 39776474 | 39776474 | + | Missense_Mutation | SNP | G | G | A | TCGA-CK-5916-01A-11D-1650-10 | TCGA-CK-5916-10A-01D-1650-10 | g.chr4:39776474G>A | c.320G>A | c.(319-321)cGc>cAc | p.R107H |
COAD | 4 | 39779360 | 39779360 | + | Missense_Mutation | SNP | C | C | T | TCGA-G4-6628-01A-11D-1835-10 | TCGA-G4-6628-10A-01D-1835-10 | g.chr4:39779360C>T | c.458C>T | c.(457-459)gCt>gTt | p.A153V |
COADREAD | 4 | 39757280 | 39757280 | + | Missense_Mutation | SNP | C | C | T | TCGA-AU-6004-01A-11D-1719-10 | TCGA-AU-6004-10A-01D-1719-10 | g.chr4:39757280C>T | c.220C>T | c.(220-222)Cgg>Tgg | p.R74W |
COADREAD | 4 | 39757308 | 39757308 | + | Missense_Mutation | SNP | A | A | G | TCGA-AF-6655-01A-11D-1826-10 | TCGA-AF-6655-10A-01D-1826-10 | g.chr4:39757308A>G | c.248A>G | c.(247-249)aAt>aGt | p.N83S |
COADREAD | 4 | 39776474 | 39776474 | + | Missense_Mutation | SNP | G | G | A | TCGA-CK-5916-01A-11D-1650-10 | TCGA-CK-5916-10A-01D-1650-10 | g.chr4:39776474G>A | c.320G>A | c.(319-321)cGc>cAc | p.R107H |
COADREAD | 4 | 39779360 | 39779360 | + | Missense_Mutation | SNP | C | C | T | TCGA-G4-6628-01A-11D-1835-10 | TCGA-G4-6628-10A-01D-1835-10 | g.chr4:39779360C>T | c.458C>T | c.(457-459)gCt>gTt | p.A153V |
ESCA | 4 | 39776478 | 39776478 | + | Silent | SNP | G | G | T | TCGA-2H-A9GQ-01A-11D-A37C-09 | TCGA-2H-A9GQ-11A-11D-A37F-09 | g.chr4:39776478G>T | c.324G>T | c.(322-324)acG>acT | p.T108T |
ESCA | 4 | 39776500 | 39776500 | + | Missense_Mutation | SNP | C | C | G | TCGA-LN-A9FO-01A-11D-A387-09 | TCGA-LN-A9FO-10A-01D-A38A-09 | g.chr4:39776500C>G | c.346C>G | c.(346-348)Cta>Gta | p.L116V |
KIPAN | 4 | 39757353 | 39757353 | + | Missense_Mutation | SNP | A | A | G | TCGA-HE-A5NF-01A-11D-A26P-10 | TCGA-HE-A5NF-10A-01D-A26P-10 | g.chr4:39757353A>G | c.293A>G | c.(292-294)gAt>gGt | p.D98G |
KIPAN | 4 | 39779353 | 39779353 | + | Missense_Mutation | SNP | G | G | A | TCGA-2Z-A9JG-01A-11D-A42J-10 | TCGA-2Z-A9JG-10A-01D-A42M-10 | g.chr4:39779353G>A | c.451G>A | c.(451-453)Gtg>Atg | p.V151M |
KIRP | 4 | 39757353 | 39757353 | + | Missense_Mutation | SNP | A | A | G | TCGA-HE-A5NF-01A-11D-A26P-10 | TCGA-HE-A5NF-10A-01D-A26P-10 | g.chr4:39757353A>G | c.293A>G | c.(292-294)gAt>gGt | p.D98G |
KIRP | 4 | 39779353 | 39779353 | + | Missense_Mutation | SNP | G | G | A | TCGA-2Z-A9JG-01A-11D-A42J-10 | TCGA-2Z-A9JG-10A-01D-A42M-10 | g.chr4:39779353G>A | c.451G>A | c.(451-453)Gtg>Atg | p.V151M |
LIHC | 4 | 39747379 | 39747379 | + | Missense_Mutation | SNP | A | A | T | TCGA-G3-A3CG-01A-11D-A20W-10 | TCGA-G3-A3CG-10A-01D-A20W-10 | g.chr4:39747379A>T | c.165A>T | c.(163-165)agA>agT | p.R55S |
LIHC | 4 | 39780009 | 39780009 | + | Silent | SNP | A | A | G | TCGA-ED-A4XI-01A-11D-A25V-10 | TCGA-ED-A4XI-10A-01D-A25V-10 | g.chr4:39780009A>G | c.558A>G | c.(556-558)aaA>aaG | p.K186K |
LIHC | 4 | 39780035 | 39780035 | + | Missense_Mutation | SNP | A | A | G | TCGA-DD-AADW-01A-11D-A38X-10 | TCGA-DD-AADW-10A-01D-A38X-10 | g.chr4:39780035A>G | c.584A>G | c.(583-585)gAa>gGa | p.E195G |
LUAD | 4 | 39780016 | 39780016 | + | Missense_Mutation | SNP | G | G | A | TCGA-05-4427-01A-21D-1855-08 | TCGA-05-4427-10A-01D-1855-08 | g.chr4:39780016G>A | c.565G>A | c.(565-567)Gat>Aat | p.D189N |
OV | 4 | 39747381 | 39747385 | + | Frame_Shift_Del | DEL | ACCAA | ACCAA | - | TCGA-24-1469-01A-01W-0553-09 | TCGA-24-1469-10A-01W-0553-09 | g.chr4:39747381_39747385delACCAA | c.167_171delACCAA | c.(166-171)taccaafs | p.YQ56fs |
OV | 4 | 39779301 | 39779301 | + | Splice_Site | SNP | G | G | C | TCGA-29-1776-01A-01W-0639-09 | TCGA-29-1776-10A-01W-0639-09 | g.chr4:39779301G>C | | c.e6-1 | |
PAAD | 4 | 39779392 | 39779392 | + | Frame_Shift_Del | DEL | A | A | - | TCGA-3A-A9IV-01A-11D-A40W-08 | TCGA-3A-A9IV-10A-01D-A40W-08 | g.chr4:39779392delA | c.490delA | c.(490-492)aaafs | p.K165fs |
READ | 4 | 39757308 | 39757308 | + | Missense_Mutation | SNP | A | A | G | TCGA-AF-6655-01A-11D-1826-10 | TCGA-AF-6655-10A-01D-1826-10 | g.chr4:39757308A>G | c.248A>G | c.(247-249)aAt>aGt | p.N83S |
SKCM | 4 | 39739109 | 39739109 | + | Missense_Mutation | SNP | G | G | A | TCGA-EB-A5KH-06A-11D-A27K-08 | TCGA-EB-A5KH-10A-01D-A27N-08 | g.chr4:39739109G>A | c.133G>A | c.(133-135)Gga>Aga | p.G45R |
SKCM | 4 | 39757304 | 39757304 | + | Missense_Mutation | SNP | C | C | T | TCGA-EE-A2MG-06A-11D-A197-08 | TCGA-EE-A2MG-10A-01D-A199-08 | g.chr4:39757304C>T | c.244C>T | c.(244-246)Cct>Tct | p.P82S |