iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

PPI - IID
Symbol 1	Symbol 2	PMID	DBs	Evidence Type	Adipose Tissue	Adrenal Gland	Amygdala	Bone	Bone Marrow	Brain	Dorsal Root Ganglia	Eye	Heart	Hindgut	Hypothalamus	Kidney	Liver	Lung	Lymph Nodes	Mammary Gland	Midgut	Neurons	Ovary	Pancreas	Pituitary Gland	Placenta	Prostate	Salivary Gland	Skeletal Muscle	Small Intestine	Spleen	Stomach	Testes	Uterus
RNF125	RNF125	21571784	biogrid	exp	GP	GP	G	G	GP	GP	G		G	GP	G	GP	G	GP	GP	G	GP	GP	GP	GP	G	GP	GP	GP	GP	GP	GP	GP	P	G
UBE2W	RNF125	19549727	biogrid,intact	exp	GP	GP	G	G	GP	GP	G		G	GP	G	GP	G	GP	GP	G	GP	GP	GP	GP	G	GP	GP	GP	GP	GP	GP	GP	P	G
CHFR	RNF125	22493164	biogrid,intact	exp	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G
TRIM46	RNF125	22493164	biogrid,intact	exp	GP	GP	G	G	G	GP	G		G	GP	G	GP	G	GP	G	G	GP	GP	P	GP	G	P	GP	GP	GP	GP	G	G	P	G
UBA1	RNF125	17460044	innatedb	exp	GP	GP	G	G	GP	GP	G		G	GP	G	GP	G	GP	GP	G	GP	GP	GP	GP	G	GP	GP	GP	GP	GP	GP	GP	P	G
USP2	RNF125	23105109	biogrid	exp		GP	G		P	GP	G		G	P	G	GP	G	GP	GP		P	GP	GP	GP	G	GP	P	GP	GP	GP	P	P	P	G
UBE2U	RNF125	19549727	biogrid,intact	exp	P	P				P				P		P		P	P		P	P	P	P		P	P	P	P	P	P	P	P
JAK1	RNF125	26027934	biogrid	exp	GP	GP	G	G	GP	GP	G		G	GP	G	GP	G	GP	GP	G	GP	GP	G	GP	G	GP	GP	GP	GP	GP	G	GP	P	G
RNF125	PCGF1	22493164	biogrid,intact	exp	P	GP		G	GP	GP	G		G	P		P		GP	P	G	P	GP	GP	GP	G	GP	GP	GP	GP	GP	P	GP	P	G
UBC	RNF125	17990982	biogrid	exp	GP	GP	G	G	GP	GP	G		G	GP	G	GP	G	GP	GP	G	GP	GP	GP	GP	G	GP	GP	GP	GP	GP	GP	GP	P	G
UBE2L3	RNF125	19549727	biogrid,intact	exp	GP	G	G	G	G	GP	G		G	GP	G	GP	G	G	G	G	GP	GP	G	GP	G	G	G	GP	GP	GP	G	GP	P	G
PML	RNF125	22493164	biogrid,intact	exp	GP	GP	G	G	GP	GP	G		G	GP	G	GP	G	GP	GP	G	GP	GP	GP	GP	G	GP	GP	GP	G	GP	GP	GP	P	G
UBE2N	RNF125	19549727, 23023127	biogrid,intact	exp, pred	GP	GP	G	G	GP	GP	G		G	GP	G	GP	G	GP	GP	G	GP	GP	G	GP	G	GP	GP	GP	GP	GP	GP	GP	P	G
RNF125	UBE2D4	19549727, 23023127	biogrid,intact	exp, pred	GP	G	G	G	GP	GP	G		G	GP	G	GP	G	GP	GP	G	G	GP	GP	GP	G	GP	GP	G	GP	G	GP	GP	P	G
DDX58	RNF125	17460044, 25402006, 21836163	innatedb,dip	exp, pred	GP	GP	G	G	GP	GP	G		G	GP	G	GP	G	GP	GP	G	GP	GP	GP	P	G	GP	GP	GP	GP	GP	GP	GP	P	G
UBE2K	RNF125	19549727, 23023127	biogrid,intact	exp, pred	GP	GP	G	G	GP	GP	G		G	GP	G	GP	G	GP	GP	G	GP	GP	GP	GP	G	GP	GP	GP	GP	GP	GP	GP	P	G
UBE2D2	RNF125	19549727,17460044, 23023127	innatedb,biogrid,intact	exp, pred	GP	G	G	G	GP	GP	G		G	GP	G	GP	G	GP	GP	G	G	GP	GP	GP	G	GP	GP	G	GP	G	GP	GP	P	G
RNF125	UBE2E2	19549727,17460044, 23023127	biogrid,intact,dip	exp, pred	GP	GP	G	G	GP	GP	G		G	GP	G	GP	G	GP	GP	G	GP	GP	GP	GP	G	GP	GP	GP	GP	GP	GP	GP	P	G
RNF125	IFIH1	17460044, 21836163	innatedb,dip	exp, pred	GP	GP			P	P	G			GP		GP	G	GP	GP	G	GP	P	G	P	G	GP	GP	GP	P	GP	GP	GP	P
UBE2D1	RNF125	19549727,21571784,17990982,17460044, 23023127	innatedb,biogrid,intact	exp, pred	GP	G	G	G	GP	GP	G		G	GP	G	GP	G	GP	GP	G	G	GP	GP	GP	G	GP	GP	G	GP	G	GP	GP	P	G
UBE2L6	RNF125	19549727,17460044, 25402006	innatedb,biogrid,intact	exp, pred	GP	GP	G	G	GP	GP	G		G	GP	G	GP	G	GP	GP	G	GP	GP	GP	GP	G	GP	GP	GP	G	GP	GP	GP	P	G
UBE2D3	RNF125	19549727,17719635,17460044, 25402006, 23023127	innatedb,biogrid,intact	exp, pred	GP	G	G	G	GP	GP	G		G	GP	G	GP	G	GP	GP	G	G	GP	GP	GP	G	GP	GP	G	GP	G	GP	GP	P	G
MAVS	RNF125	17460044, 25402006	innatedb,dip	exp, pred	GP	GP	G	G	GP	GP	G		G	GP	G	GP	G	GP	GP	G	GP	GP	GP	GP	G	GP	GP	GP	GP	GP	GP	GP	P	G
UBE3A	RNF125	25402006		pred	GP	GP	G	G	GP	GP	G		G	GP	G	GP	G	GP	GP	G	GP	GP	GP	GP	G	GP	GP	GP	GP	GP	GP	GP	P	G
RNF13	RNF125	23023127		pred	GP	GP	G	G	GP	GP	G		G	GP	G	GP	G	GP	GP	G	GP	GP	GP	GP	G	GP	GP	GP	GP	GP	GP	GP	P	G
SIAH1	RNF125	25402006		pred	GP	GP	G	G	GP	GP	G		G	GP	G	GP	G	GP	GP	G	GP	GP	GP	GP	G	GP	GP	GP	GP	GP	GP	GP	P	G
DYSF	RNF125	23023127		pred	G	G	G	G	GP	G	G		G	GP	G	GP	G	G	G	G	G	G	G	G	G	GP	G	G	GP	G	GP	G	P	G
NEDD4	RNF125	25402006		pred	GP	GP		G	GP	P	G		G	GP		GP	G	GP	GP	G	GP	GP	GP	GP	G	GP	GP	GP	GP	GP	GP	GP	P	G
RNF125	TTC14	23023127		pred	GP	GP	G	G	GP	GP	G		G	GP	G	GP	G	GP	G	G	GP	GP	G	GP	G	GP	GP	GP	GP	GP	G	GP	P	G
RNF125	RNF5	25402006		pred	GP	GP	G	G	GP	GP	G		G	GP	G	GP	G	GP	GP	G	GP	GP	G	GP	G	GP	GP	GP	GP	GP	G	GP	P	G
DHX58	RNF125	25402006		pred	P	P				P				P		P					P	P	P	P		P		P		P		P	P
RNF19B	RNF125	25402006		pred	GP	GP	G	G	GP	GP	G		G	GP	G	GP	G	GP	GP	G	GP	GP	GP	GP	G	GP	GP	GP	GP	GP	GP	GP	P	G
TNFAIP3	RNF125	25402006		pred	GP	GP	G	G	GP	GP	G		G	GP	G	GP	G	GP	GP	G	GP	GP	GP	GP	G	GP	GP	GP	GP	GP	G	GP	P	G
TRIM25	RNF125	25402006		pred	G	GP	G	G	GP	GP	G		G	GP	G	GP	G	GP	GP	G	GP	GP	GP	GP	G	GP	GP	GP	G	GP	GP	GP	P	G
RNF125	OTUD5	25402006		pred	GP	GP	G	G	G	GP	G		G	GP	G	GP	G	GP	GP	G	GP	GP	GP	GP	G	GP	GP	GP	GP	GP	G	GP	P	G
LDLRAD4	RNF125	23023127		pred	GP	GP	G	G	GP	GP	G		G	GP	G	GP	G	GP	GP	G	GP	GP	GP	GP	G	P	GP	GP	GP	GP	GP	GP	P	G
PCBP2	RNF125	25402006		pred	GP	GP	G	G	GP	GP	G		G	GP	G	GP	G	GP	GP	G	GP	GP	GP	GP	G	GP	GP	GP	GP	GP	GP	GP	P	G
UBE2F	RNF125	23023127		pred	GP	GP	G	G	GP	GP	G		G	GP	G	GP	G	GP	GP	G	GP	GP	G	GP	G	GP	GP	GP	GP	GP	GP	GP	P	G
RFWD3	RNF125	25402006		pred	G			G	G					G		G		G	G	G	G		G	G	G	G	G			G	G	G
RNF125	CABP5	23023127		pred	P	P			P	P				P		P		P	P		P	P	P	P		P	P	P	P	P	P	P	P
RNF125	TOPORS	25402006		pred	GP	GP	G	G	GP	GP	G		G	GP	G	GP	G	GP	GP	G	GP	GP	GP	GP	G	GP	GP	GP	GP	GP	GP	GP	P	G
RNF4	RNF125	25402006		pred	GP	G	G	G	G	GP	G		G	GP	G	GP	G	G	G	G	G	GP	GP	G	G	GP	GP	GP	GP	G	G	GP	P	G
UBE4A	RNF125	23023127		pred	GP	GP	G	G	G	GP	G		G	GP	G	GP	G	GP	GP	G	GP	GP	GP	GP	G	GP	GP	GP	GP	GP	G	GP	P	G
UBE2G1	RNF125	23023127		pred	GP	GP	G	G	GP	GP	G		G	GP	G	GP	G	GP	GP	G	GP	GP	GP	GP	G	GP	GP	GP	GP	GP	GP	GP	P	G
RNF125	PTCD3	23023127		pred	GP	GP	G	G	GP	GP	G		G	GP	G	GP	G	GP	GP	G	GP	GP	GP	GP	G	GP	GP	GP	GP	GP	GP	GP	P	G
PRKCQ	RNF125	23023127		pred	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G
RNF125	RNF11	25402006		pred	GP	GP	G	G	GP	GP	G		G	GP	G	GP	G	GP	GP	G	GP	GP	GP	GP	G	GP	GP	GP	GP	GP	GP	GP	P	G
RNF125	SLC25A23	23023127		pred	G	G	G		P	GP	G		G	GP	G	GP	G	GP	G	G	GP	GP	G	GP	G		G	GP	G	GP	G	GP	P	G
XIAP	RNF125	25402006		pred	GP	GP	G	G	G	GP	G		G	GP	G	GP	G	GP	GP	G	GP	GP	G	GP	G	G	GP	GP	G	GP	G	GP	P	G
RNF25	RNF125	25402006		pred		P	G			P				P		P		P	P		P	P		P		P			P	P	GP	P	P
RNF125	STUB1	23023127		pred	GP	GP	G	G	GP	GP	G		G	GP	G	GP	G	GP	GP	G	GP	GP	GP	GP	G	GP	GP	GP	GP	GP	GP	GP	P	G
RNF125	EFHD1	23023127		pred	GP	GP	G	G	GP	GP	G		G	GP	G	GP	G	GP	GP	G	GP	GP	G	GP	G	GP	GP	G	G	GP	GP	GP	P	G
RNF125	AZI2	25402006		pred	GP	GP	G	G	GP	GP	G		G	GP	G	GP	G	GP	GP	G	GP	GP	GP	GP	G	GP	GP	GP	GP	GP	GP	GP	P	G
TRIM59	RNF125	23023127		pred		P	G	G	G	GP				GP	G	P		GP	GP		GP	GP	GP	GP		P	GP	P	P	GP	GP	GP	P	G
RNF220	RNF125	23023127		pred	G	GP	G	G	GP	GP	G		G	GP	G	GP	G	GP	G	G	G	GP	G	GP	G	GP	GP	GP	GP	G	G	GP		G
RNF141	RNF125	23023127		pred	GP	GP	G	G	GP	GP	G		G	GP	G	GP	G	GP	GP	G	GP	GP	GP	GP	G	GP	GP	GP	GP	GP	GP	GP	P	G
TRAF3	RNF125	25402006		pred	G	GP	G	G	GP	GP	G		G	G	G	GP	G	GP	GP	G	GP	GP	GP	GP	G	GP	G	GP	G	GP	G	GP	P	G
RNF111	RNF125	25402006		pred	GP	GP	G	G	GP	GP	G		G	GP	G	GP	G	GP	GP	G	GP	GP	GP	GP	G	GP	GP	GP	GP	GP	GP	GP	P	G
UBA7	RNF125	25402006		pred	P	P				P				P		P		P	P		P	P	P	P		P	P	P		P	P	P	P
RNF144B	RNF125	25402006		pred	G	GP	G	G	G	GP	G		G	GP	G	GP	G	GP	G	G	GP	GP	GP	GP	G	GP	G	G	G	GP	G	G	P	G
ATG12	RNF125	25402006		pred	GP	GP	G	G	GP	GP	G		G	GP	G	GP	G	GP	GP	G	GP	GP	GP	GP	G	GP	GP	GP	GP	GP	GP	GP	P	G
UBOX5	RNF125	25402006		pred	GP	GP	G	G	G	GP	G		G	P	G	G	G	GP	GP	G	P	GP	G	G	G	G	G	GP	P	GP	GP	GP		G
RNF125	TRIM39	25402006		pred		P			P	P						P		P	P			P		P				P			P	P	P
BRCA1	RNF125	25402006		pred	P	P		G	GP	P				P		P		P	P		GP	P	P	P		P	P	P	P	P	P	P	P
RNF144A	RNF125	23023127		pred	G	GP	G	G	GP	GP	G		G	GP	G	GP		GP	GP	G	GP	GP	GP	GP	G	P	G	GP	GP	GP	GP	GP	P	G
TPPP	RNF125	23023127		pred	G	G	G	G	G	GP	G		G	GP	G	GP	G	GP	G	G	G	GP	G	GP	G		G	G	G	G	G	G		G
LDB3	RNF125	23023127		pred	G	GP	G			G	G		G	G	G	GP		G	G	G	G	G	G		G	GP	G	G	GP	G		G	P	G
RNF125	RNF26	25402006		pred	GP	GP	G	G	GP	GP	G		G	GP	G	GP	G	GP	GP	G	GP	GP	G	GP	G	GP	GP	G	G	GP	GP	GP	P	G
RNF125	CYLD	25402006		pred	GP	GP	G	G	GP	GP	G		G	GP	G	GP	G	GP	GP	G	GP	GP	GP	P	G	GP	GP	GP	GP	GP	GP	GP	P
GCA	RNF125	23023127		pred	G	G	G	G	GP	GP	G		G	G	G	G	G	GP	G	G	G	GP	G	G	G	G	G	G	G	G	GP	G	P	G
UBE2NL	RNF125	23023127		pred	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G
IRF3	RNF125	25402006		pred	GP	GP	G	G	GP	GP	G		G	GP	G	GP	G	GP	GP	G	GP	GP	GP	GP	G	GP	GP	GP	G	GP	GP	GP	P	G
RNF125	ATG5	25402006		pred	GP	GP	G	G	GP	GP	G		G	GP	G	GP	G	GP	GP	G	GP	GP	GP	GP	G	GP	GP	GP	GP	GP	GP	GP	P	G
RNF125	ITCH	25402006		pred	GP	GP	G	G	GP	GP	G		G	GP	G	GP	G	GP	GP	G	GP	GP	GP	GP	G	GP	GP	GP	GP	GP	GP	GP	P	G
RNF125	RNF126	25402006		pred	GP	G	G	G	GP	GP	G		G	GP	G	GP	G	GP	GP	G	GP	GP	GP	P	G	GP	GP	G	G	GP	GP	GP	P	G
UBE2E1	RNF125	23023127		pred	GP	GP	G	G	G	GP	G		G	GP	G	GP	G	G	GP	G	GP	GP	GP	G	G	GP	G	G	GP	GP	G	GP	P	G
ZNRF1	RNF125	25402006		pred	GP	GP	G	G	GP	GP	G		G	GP	G	GP	G	GP	GP	G	GP	GP	GP	GP	G	GP	GP	GP	GP	GP	GP	GP	P	G
RNF125	NCOR2	21836163		pred	GP	GP	G	G	GP	GP	G		G	GP	G	GP	G	GP	G	G	GP	GP	GP	GP	G	GP	GP	GP	G	GP	GP	GP	P	G
DTX3L	RNF125	25402006		pred	GP	GP	G	G	GP	GP	G		G	GP	G	GP	G	GP	GP	G	GP	GP	GP	G	G	GP	G	GP	GP	GP	GP	GP	P	G
RNF125	AMFR	25402006		pred	GP	GP	G	G	GP	GP	G		G	GP	G	GP	G	GP	GP	G	GP	GP	GP	GP	G	GP	GP	GP	GP	GP	GP	GP	P	G
RNF125	TRAF6	25402006		pred	GP	GP	G	G	GP	G	G		G	GP	G	GP	G	GP	G	G	GP	G	GP	G	G	GP	GP	GP	G	GP	GP	GP	P	G
CALM1, CALM2, CALM3	RNF125	23023127		pred	GP	GP	G	G	GP	GP	G		G	GP	G	GP	G	GP	GP	G	GP	GP	GP	GP	G	GP	GP	GP	GP	GP	GP	GP	P	G
RNF135	RNF125	25402006		pred	GP	GP	G	G	GP	GP	G		G	GP	G	GP	G	GP	GP	G	GP	GP	G	GP	G	GP	GP	GP	GP	GP	G	GP	P	G

PPI - iRefIndex
UniProt A	UniProt B	Method	PMID	Interaction Type	Edge type	Num Participants
A0A024R1A4	Q96EQ8	two hybrid	19549727	direct interaction	X	2
Q96EQ8	O75604-2	two hybrid	23105109	direct interaction	X	2
Q96EQ8	P29590-5	two hybrid	22493164	direct interaction	X	2
Q96EQ8	Q7Z4K8	two hybrid	22493164	direct interaction	X	2
Q96EQ8	A0A087WW00	pull down	21571784	direct interaction	X	2
Q96EQ8	A0A087WW00	two hybrid	19549727	direct interaction	X	2
Q96EQ8	A0A024RA90	two hybrid	19549727	direct interaction	X	2
Q96EQ8	O14933-2	two hybrid	19549727	direct interaction	X	2
Q96EQ8	P61086	two hybrid	19549727	direct interaction	X	2
Q96EQ8		two hybrid	19549727	direct interaction	X	2
Q96EQ8	Q9BSM1	two hybrid	22493164	direct interaction	X	2
Q96EQ8	Q96EP1-4	two hybrid	22493164	direct interaction	X	2
Q96EQ8	Q96EQ8	enzymatic study	21571784	direct interaction	X	2
Q96EQ8	P61077-3	affinity chromatography technology	17719635	physical association	X	2
Q96EQ8	P62837	two hybrid	19549727	direct interaction	X	2
Q96EQ8	P61077-3	two hybrid	19549727	direct interaction	X	2
Q96EQ8	P61088	two hybrid	19549727	direct interaction	X	2
Q96EQ8	Q96FI0	two hybrid	19549727	direct interaction	X	2
Q96EQ8	A0A024R2Q2	two hybrid	19549727	direct interaction	X	2
P0CG48	Q96EQ8	affinity chromatography technology	21963094	physical association	X	2
P0CG48	Q96EQ8	affinity chromatography technology	17990982	physical association	X	2
P0CG48	Q96EQ8	pull down	17990982	direct interaction	X	2
P0CG48	Q96EQ8	affinity chromatography technology	21906983	physical association	X	2
	Q96EQ8	anti tag coimmunoprecipitation	17460044	-	C	3
Q96EQ8	A0A024R2Q2	two hybrid	17460044	physical association	X	2
Q96EQ8	A0A024R2Q2	anti tag coimmunoprecipitation	17460044	physical association	X	2
Q96EQ8	A0A024R2Q2	anti tag coimmunoprecipitation	17460044	physical association	X	2
Q96EQ8	A0A024R2Q2	anti tag coimmunoprecipitation	17460044	physical association	X	2
Q96EQ8	O95786	anti tag coimmunoprecipitation	17460044	physical association	X	2
Q96EQ8	O95786	anti tag coimmunoprecipitation	17460044	physical association	X	2
Q96EQ8	O95786	anti tag coimmunoprecipitation	17460044	physical association	X	2
Q96EQ8	O95786	anti tag coimmunoprecipitation	17460044	physical association	X	2
Q96EQ8	O95786	anti bait coimmunoprecipitation	17460044	physical association	X	2
Q96EQ8	Q7Z434	anti tag coimmunoprecipitation	17460044	physical association	X	2
Q96EQ8	Q7Z434	anti tag coimmunoprecipitation	17460044	physical association	X	2
Q96EQ8	Q9BYX4	anti tag coimmunoprecipitation	17460044	physical association	X	2
Q96EQ8	Q9BYX4	anti tag coimmunoprecipitation	17460044	physical association	X	2
P29590	Q96EQ8	two hybrid array	22493164	physical association	X	2
A0A024R1A4	Q96EQ8	two hybrid	19549727	physical association	X	2
A0A024R1A4	Q96EQ8	two hybrid array	19549727	physical association	X	2
Q96EP1	Q96EQ8	two hybrid array	22493164	physical association	X	2
Q96EQ8	Q96B02	two hybrid array	19549727	physical association	X	2
Q96EQ8	P61086	two hybrid	19549727	physical association	X	2
Q96EQ8	A0A024RA90	two hybrid array	19549727	physical association	X	2
Q96EQ8	Q7Z4K8	two hybrid array	22493164	physical association	X	2
Q5NIA8	Q96EQ8	two hybrid pooling approach	20711500	physical association	X	2
O14933	Q96EQ8	two hybrid	19549727	physical association	X	2
O14933	Q96EQ8	two hybrid array	19549727	physical association	X	2
A0A024QZJ2	Q96EQ8	two hybrid array	19549727	physical association	X	2
Q96EQ8	Q5VVX9	two hybrid array	19549727	physical association	X	2
Q96EQ8	P62837	two hybrid array	19549727	physical association	X	2
Q96EQ8	B3KSH4	two hybrid array	19549727	physical association	X	2
Q96EQ8	A0A024RDH2	two hybrid array	19549727	physical association	X	2
Q96EQ8	A0A024R2Q2	two hybrid array	19549727	physical association	X	2
Q96EQ8	P61088	two hybrid array	19549727	physical association	X	2
Q96EQ8	Q9BSM1	two hybrid array	22493164	physical association	X	2

PPI - PINA
Gene A	Gene B	Method	Publications	Species A	Species B	Interaction Type	Source Database	Interaction Identidiers	Experimental Role(s) Interactor A	Experimental Role(s) Interactor B
PML	RNF125	MI:0397(two hybrid array)\|MI:0415(enzymatic study)	22493164	taxid:9606(Homo sapiens)	taxid:9606(Homo sapiens)	MI:0915(physical association)\|MI:0407(direct interaction)	(intact)\|(biogrid)	UniProt_122563\|BIOGRID_283955	bait\|prey	prey\|bait
UBE2D1	RNF125	MI:0018(two hybrid)\|MI:0401(biochemical)\|MI:0018(two hybrid)	19549727,21571784	taxid:9606(Homo sapiens)	taxid:9606(Homo sapiens)	MI:0915(physical association)\|MI:0407(direct interaction)\|MI:0407(direct interaction)	(intact)\|(biogrid)\|(biogrid)	UniProt_101007\|BIOGRID_196797\|BIOGRID_124023	bait\|bait\|bait	prey\|prey\|prey
RNF125	PCGF1	MI:0397(two hybrid array)\|MI:0415(enzymatic study)	22493164	taxid:9606(Homo sapiens)	taxid:9606(Homo sapiens)	MI:0915(physical association)\|MI:0407(direct interaction)	(intact)\|(biogrid)	UniProt_122594\|BIOGRID_284116	prey\|prey	bait\|bait
RNF125	UBE2D4	MI:0018(two hybrid)\|MI:0018(two hybrid)	19549727	taxid:9606(Homo sapiens)	taxid:9606(Homo sapiens)	MI:0407(direct interaction)\|MI:0915(physical association)	(biogrid)\|(intact)	BIOGRID_124025\|UniProt_101154	prey\|prey	bait\|bait
CHFR	RNF125	MI:0397(two hybrid array)\|MI:0415(enzymatic study)	22493164	taxid:9606(Homo sapiens)	taxid:9606(Homo sapiens)	MI:0915(physical association)\|MI:0407(direct interaction)	(intact)\|(biogrid)	UniProt_122564\|BIOGRID_284135	bait\|prey	prey\|bait
UBE2L3	RNF125	MI:0018(two hybrid)\|MI:0018(two hybrid)\|MI:0018(two hybrid)	19549727	taxid:9606(Homo sapiens)	taxid:9606(Homo sapiens)	MI:0407(direct interaction)\|MI:0915(physical association)\|MI:0915(physical association)	(biogrid)\|(intact)\|(intact)	BIOGRID_124026\|UniProt_101103\|UniProt_100868	bait\|bait\|bait	prey\|prey\|prey
UBE2K	RNF125	MI:0018(two hybrid)\|MI:0018(two hybrid)	19549727	taxid:9606(Homo sapiens)	taxid:9606(Homo sapiens)	MI:0915(physical association)\|MI:0407(direct interaction)	(intact)\|(biogrid)	UniProt_100747\|BIOGRID_124028	bait\|bait	prey\|prey
UBE2D2	RNF125	MI:0018(two hybrid)\|MI:0018(two hybrid)	19549727	taxid:9606(Homo sapiens)	taxid:9606(Homo sapiens)	MI:0407(direct interaction)\|MI:0915(physical association)	(biogrid)\|(intact)	BIOGRID_124024\|UniProt_101032	bait\|bait	prey\|prey
UBE2N	RNF125	MI:0018(two hybrid)\|MI:0018(two hybrid)	19549727	taxid:9606(Homo sapiens)	taxid:9606(Homo sapiens)	MI:0915(physical association)\|MI:0407(direct interaction)	(intact)\|(biogrid)	UniProt_101387\|BIOGRID_124257	bait\|bait	prey\|prey
TRIM46	RNF125	MI:0397(two hybrid array)\|MI:0415(enzymatic study)	22493164	taxid:9606(Homo sapiens)	taxid:9606(Homo sapiens)	MI:0915(physical association)\|MI:0407(direct interaction)	(intact)\|(biogrid)	UniProt_122580\|BIOGRID_284149	bait\|bait	prey\|prey
UBE2U	RNF125	MI:0018(two hybrid)\|MI:0018(two hybrid)	19549727	taxid:9606(Homo sapiens)	taxid:9606(Homo sapiens)	MI:0915(physical association)\|MI:0407(direct interaction)	(intact)\|(biogrid)	UniProt_101519\|BIOGRID_124260	bait\|bait	prey\|prey
USP2	RNF125	MI:0018(two hybrid)	23105109	taxid:9606(Homo sapiens)	taxid:9606(Homo sapiens)	MI:0407(direct interaction)	(biogrid)	BIOGRID_248168	bait	prey
RNF125	HIP2	MI:0018(two hybrid)	19549727	taxid:9606(Homo sapiens)	taxid:9606(Homo sapiens)	MI:0915(physical association)	(intact)	UniProt_100979	prey	bait
RNF125	UBE2E2	MI:0018(two hybrid)\|MI:0018(two hybrid)	19549727	taxid:9606(Homo sapiens)	taxid:9606(Homo sapiens)	MI:0407(direct interaction)\|MI:0915(physical association)	(biogrid)\|(intact)	BIOGRID_124259\|UniProt_101327	prey\|prey	bait\|bait
UBC	RNF125	MI:0004(affinity chromatography technology)\|MI:0004(affinity chromatography technology)\|MI:0004(affinity chromatography technology)\|MI:0004(affinity chromatography technology)	17990982,21906983,21963094	taxid:9606(Homo sapiens)	taxid:9606(Homo sapiens)	MI:0407(direct interaction)\|MI:0915(physical association)\|MI:0915(physical association)\|MI:0915(physical association)	(biogrid)\|(biogrid)\|(biogrid)\|(biogrid)	BIOGRID_117750\|BIOGRID_264945\|BIOGRID_180269\|BIOGRID_117749	prey\|bait\|bait\|prey	bait\|prey\|prey\|bait
UBE2D3	RNF125	MI:0004(affinity chromatography technology)\|MI:0018(two hybrid)\|MI:0018(two hybrid)	17719635,19549727	taxid:9606(Homo sapiens)	taxid:9606(Homo sapiens)	MI:0915(physical association)\|MI:0915(physical association)\|MI:0407(direct interaction)	(biogrid)\|(intact)\|(biogrid)	BIOGRID_118756\|UniProt_101288\|BIOGRID_124256	bait\|bait\|bait	prey\|prey\|prey
UBE2L6	RNF125	MI:0018(two hybrid)\|MI:0018(two hybrid)\|MI:0018(two hybrid)	19549727	taxid:9606(Homo sapiens)	taxid:9606(Homo sapiens)	MI:0915(physical association)\|MI:0407(direct interaction)\|MI:0915(physical association)	(intact)\|(biogrid)\|(intact)	UniProt_101126\|BIOGRID_124027\|UniProt_100883	bait\|bait\|bait	prey\|prey\|prey
UBE2W	RNF125	MI:0018(two hybrid)\|MI:0018(two hybrid)	19549727	taxid:9606(Homo sapiens)	taxid:9606(Homo sapiens)	MI:0915(physical association)\|MI:0407(direct interaction)	(intact)\|(biogrid)	UniProt_101484\|BIOGRID_124258	bait\|bait	prey\|prey

PPI - HINT
Gene A	Gene B	PMID	Method	Quality
HIP2	RNF125	19549727	0397	HT
UBE2L6	RNF125	19549727,17460044,17460044,19549727	0397,0018,0007,0018	HT,LC
USP2	RNF125	23105109	0018	LC
PML	RNF125	22493164,22493164	0018,0397	HT
UBE2D1	RNF125	19549727,17990982,19549727,21571784,21571784	0397,0018,0018,0096,0415	HT,LC
UBE2D3	RNF125	19549727,19549727	0397,0018	HT
UBE2K	RNF125	19549727	0018	HT
UBE2N	RNF125	19549727,19549727	0397,0018	HT
UBE2D2	RNF125	19549727,19549727	0397,0018	HT
UBE2L3	RNF125	19549727,19549727	0397,0018	HT
UBE2U	RNF125	19549727,19549727	0397,0018	HT
TRIM46	RNF125	22493164,22493164	0018,0397	HT
UBE2W	RNF125	19549727,19549727	0397,0018	HT
CHFR	RNF125	22493164,22493164	0018,0397	HT
RNF125	RNF125	27411375,21571784	0114,0415	LC
RNF125	UBE2E2	19549727,17460044,17460044,19549727	0397,0018,0007,0018	HT,LC
RNF125	PCGF1	22493164,22493164	0018,0397	HT
RNF125	UBE2D4	19549727,19549727	0397,0018	HT
RNF125	HEL-S-71	19549727	0018	HT

PPI - Mentha
Protein A	Protein B	Gene A	Gene B	Score	PMID
Q96EQ8	O75604	RNF125	USP2	0.183	23105109
Q96EQ8	Q88489	RNF125	Q88489	0.126	22014111
Q96EQ8	P04637	RNF125	TP53	0.569	25591766
Q96EQ8	Q96B02	RNF125	UBE2W	0.286	19549727
Q96EQ8	P29590	RNF125	PML	0.286	22493164
Q96EQ8	O14933	RNF125	UBE2L6	0.583	19549727
Q96EQ8	P68036	RNF125	UBE2L3	0.583	19549727
Q96EQ8	Q96EP1	RNF125	CHFR	0.286	22493164
Q9BSM1	Q96EQ8	PCGF1	RNF125	0.286	22493164
Q96EQ8	P51668	RNF125	UBE2D1	0.286	19549727
Q96EQ8	Q7Z4K8	RNF125	TRIM46	0.286	22493164
Q96EQ8	Q91NH1	RNF125	Q91NH1	0.126	22014111
Q96EQ8	B3KSH4	RNF125	HIP2	0.236	19549727
Q96EQ8	P0CG48	RNF125	UBC	0.309	17990982
Q96EQ8	P23458	RNF125	JAK1	0.376	26027934
Q96EQ8	P61077	RNF125	UBE2D3	0.436	19549727,17719635
Q96EQ8	P61086	RNF125	UBE2K	0.332	19549727
Q96EQ8	P61088	RNF125	UBE2N	0.376	19549727
Q96EQ8	P62837	RNF125	UBE2D2	0.376	19549727
Q96EQ8	Q5NIA8	RNF125	PRFA	0.126	20711500
Q96EQ8	Q5VVX9	RNF125	UBE2U	0.376	19549727
Q96LR5	Q96EQ8	UBE2E2	RNF125	0.286	19549727
Q9Y2X8	Q96EQ8	UBE2D4	RNF125	0.376	19549727

PPI - InWeb_IM
Gene A	Gene B	MI 1	Interaction 1	MI 2	Interaction 2
UBE2L6	RNF125	MI:0045	experimental interaction detection	MI:0461	interaction database
USP2	RNF125	MI:0045	experimental interaction detection	MI:0461	interaction database
DDX58	RNF125	MI:0362	inference	MI:0461	interaction database
TP53	RNF125	MI:0045	experimental interaction detection	MI:0461	interaction database
UBC	RNF125	MI:0045	experimental interaction detection	MI:0461	interaction database
JAK1	RNF125	MI:0045	experimental interaction detection	MI:0461	interaction database
PML	RNF125	MI:0045	experimental interaction detection	MI:0461	interaction database
UBE2D1	RNF125	MI:0045	experimental interaction detection	MI:0461	interaction database
UBE2D3	RNF125	MI:0045	experimental interaction detection	MI:0461,MI:1106	interaction database,pathways database
UBE2K	RNF125	MI:0045	experimental interaction detection	MI:0461	interaction database
UBE2N	RNF125	MI:0045	experimental interaction detection	MI:0461	interaction database
UBE2D2	RNF125	MI:0045	experimental interaction detection	MI:0461	interaction database
UBE2L3	RNF125	MI:0045	experimental interaction detection	MI:0461	interaction database
UBE2U	RNF125	MI:0045	experimental interaction detection	MI:0461	interaction database
MAVS	RNF125	MI:0362	inference	MI:0461	interaction database
TRIM46	RNF125	MI:0045	experimental interaction detection	MI:0461	interaction database
UBE2W	RNF125	MI:0045	experimental interaction detection	MI:0461	interaction database
CHFR	RNF125	MI:0045	experimental interaction detection	MI:0461	interaction database
RNF125	UBE2E2	MI:0045	experimental interaction detection	MI:0461	interaction database
RNF125	PCGF1	MI:0045	experimental interaction detection	MI:0461	interaction database
RNF125	IFIH1	MI:0362	inference	MI:0461	interaction database
RNF125	UBE2D4	MI:0045	experimental interaction detection	MI:0461	interaction database