iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

SNP - dbSNP
dbSNP	Type	Alleles	Het	Se(het)	Fxn-class	Gene Name	Assembly	Chr-pos	Sequence	Entrez Gene
rs1610	snp	C/T	0.286303	0.24735	utr-variant-3-prime, nc-transcript-variant	UBFD1	GRCh38.p7	16:23570832	TTTATTGATTTCCAT[C/T]GTATTGACTTTAAAA	56061
rs9871	snp	A/G	0.177824	0.239355	utr-variant-3-prime, nc-transcript-variant	UBFD1	GRCh38.p7	16:23573740	GAGTAAGAGGAAAAC[A/G]AGCCCCTTCTGGGTG	56061
rs152454	snp	C/T	0.287346	0.247195	utr-variant-3-prime, nc-transcript-variant	UBFD1	GRCh38.p7	16:23571790	GATAAATTGCTTTCA[C/T]GATTAGCTCACCTTC	56061
rs152455	snp	A/G	0.439085	0.163545	utr-variant-3-prime, nc-transcript-variant	UBFD1	GRCh38.p7	16:23571752	CTAGCAGGTTGGCCA[A/G]TGTTATTGAACAACA	56061
rs152457	snp	C/T	0.282369	0.247896	intron-variant	UBFD1	GRCh38.p7	16:23570357	AAAACCAAACAAAAC[C/T]TTGCACGTGGGGAGC	56061
rs152458	snp	G/T	0.135825	0.222405	intron-variant, utr-variant-3-prime	UBFD1	GRCh38.p7	16:23565946	AAGTGAAGCGGGACT[G/T]GGTGAGGTCAGGGGA	56061
rs152459	snp	A/G	0.00755907	0.0610114	intron-variant, utr-variant-3-prime	UBFD1	GRCh38.p7	16:23565848	CAGGGGGAGGGGGGC[A/G]GGGAGGCTCAGCAAA	56061
rs152460	snp	G/T	0.439502	0.163061	intron-variant	UBFD1	GRCh38.p7	16:23562512	GGGAGGCCAAAGCGG[G/T]CAGATCACCTGAGGT	56061
rs152461	snp	A/G	0.00755907	0.0610114	intron-variant	UBFD1	GRCh38.p7	16:23561481	GAACTTAGAATCCTT[A/G]AAGAGCTGCCTCAGA	56061
rs916697	snp	A/G	0.178465	0.239547	upstream-variant-2KB, intron-variant	EARS2, UBFD1	GRCh38.p7	16:23558583	GAATCTCCTGGGAAA[A/G]GGCCCAGAAGCTGTA	56061
rs933698	snp	A/G	0.00199481	0.0315187	upstream-variant-2KB, intron-variant	EARS2, UBFD1	GRCh38.p7	16:23558738	AAGAGCTATGAACAA[A/G]GTAAAATTAAGAAAC	56061
rs1811175	snp	C/T	0.198944	0.244731	upstream-variant-2KB, intron-variant	EARS2, UBFD1	GRCh38.p7	16:23558861	CCTGGGAGGCGGAGG[C/T]TGCAGTGAGCCAAGA	56061
rs1811176	snp	C/T	0.199873	0.244923	upstream-variant-2KB, intron-variant	EARS2, UBFD1	GRCh38.p7	16:23558713	AGAAACAGAATCGAC[C/T]GTGAAGAACCAGCAT	56061
rs2097661	snp	C/T	0.0905309	0.192535	upstream-variant-2KB, intron-variant	EARS2, UBFD1	GRCh38.p7	16:23558453	gcaacttactagctc[C/T]ataaacttgagTCTC	56061
rs2234418	snp	A/G	0.00716266	0.059414	intron-variant, upstream-variant-2KB	EARS2, UBFD1	GRCh38.p7	16:23556291	GTCACCCTCTAGCTT[A/G]CTAAGCTCCCAACAG	56061
rs2234419	snp	G/T	0.177503	0.239258	intron-variant, upstream-variant-2KB	EARS2, UBFD1	GRCh38.p7	16:23556490	CTCCCAAGTAGCTGG[G/T]ATTACAGGCATGCGC	56061
rs2234420	snp	A/G	0.0295035	0.117819	intron-variant, upstream-variant-2KB	EARS2, UBFD1	GRCh38.p7	16:23556575	GTCAGACGGCTCTCA[A/G]GTGATCCACTTGACC	56061
rs2234421	snp	A/G	0.0295035	0.117819	intron-variant, upstream-variant-2KB	EARS2, UBFD1	GRCh38.p7	16:23556692	TAGGCTTCACATAGC[A/G]TGCTCCTTCTTGTCA	56061
rs2234422	snp	G/T	0.00398564	0.0444627	intron-variant, upstream-variant-2KB	EARS2, UBFD1	GRCh38.p7	16:23556714	ttcttgtcatttgga[G/T]ctcagctcaaatgtt	56061
rs2234423	snp	A/G	0.000399281	0.0141238	intron-variant, upstream-variant-2KB, synonymous-codon, nc-transcript-variant	EARS2, UBFD1	GRCh38.p7	16:23556942	cctgttacacaggtt[A/G]tcatcaatgcacatg	56061
rs2234424	snp	C/G/T	0.00249663	0.0352522	intron-variant, upstream-variant-2KB, utr-variant-5-prime, nc-transcript-variant	EARS2, UBFD1	GRCh38.p7	16:23557144	ATTCATTCGGGAACA[C/G/T]TCGTGGGGCGGAGAC	56061
rs2234425	snp	A/G			utr-variant-5-prime, upstream-variant-2KB, nc-transcript-variant	EARS2, UBFD1	GRCh38.p7	16:23557365	TGGAATAGCACACGT[A/G]GGCTTCTCCCTGCGT	56061
rs2234426	snp	G/T	0.00433211	0.0463388	upstream-variant-2KB	EARS2, UBFD1	GRCh38.p7	16:23557459	AAGTCACAGGCCCCC[G/T]AGCGCGAAATCCCAC	56061
rs2234427	snp	A/C/T	0.00742903	0.0604923	upstream-variant-2KB	EARS2, UBFD1	GRCh38.p7	16:23557477	CGCGAAATCCCACGC[A/C/T]CCCCTGGACGGCTGC	56061
rs2234428	snp	A/G	0.151744	0.229882	upstream-variant-2KB, utr-variant-5-prime, nc-transcript-variant	EARS2, UBFD1	GRCh38.p7	16:23557571	CAGCTTGGGAAAGCG[A/G]AAGCGTGGCAGGGGC	56061
rs2234429	snp	C/T	0.00314055	0.039502	intron-variant	UBFD1	GRCh38.p7	16:23562741	TAAAGGTATGTTCTT[C/T]CTCGCCTCCTTGCTG	56061
rs2234430	snp	G/T	0.000387065	0.0139062	intron-variant	UBFD1	GRCh38.p7	16:23562756	CCTCGCCTCCTTGCT[G/T]GCCCACTGCCTGCCT	56061
rs2234431	snp	G/T	0.000387333	0.013911	intron-variant	UBFD1	GRCh38.p7	16:23562757	CTCGCCTCCTTGCTG[G/T]CCCACTGCCTGCCTC	56061
rs2234432	snp	A/G			intron-variant	UBFD1	GRCh38.p7	16:23562782	TGCCTCTGGCACCCA[A/G]CAGCACTCACATTTT	56061
rs2234433	snp	A/G	0.0225311	0.10372	intron-variant, downstream-variant-500B	UBFD1	GRCh38.p7	16:23567113	TCTCACTAGACTCCC[A/G]CTTCACCTGGCAGGG	56061
rs2234434	snp	A/G	0.000198791	0.00996774	synonymous-codon, missense, nc-transcript-variant	UBFD1	GRCh38.p7	16:23570482	TTTTCCCTTCCAGGC[A/G]TTTCAGTTGGGCCCC	56061
rs2239950	snp	A/T	0.0146672	0.084371	intron-variant	UBFD1	GRCh38.p7	16:23563522	TTAAAGATGCTTGGG[A/T]ACTTTAACTGGCACA	56061
rs2269767	snp	C/T	0.24449	0.249939	intron-variant	UBFD1	GRCh38.p7	16:23564368	GTGAAATGAAGAAAA[C/T]AGCAAGTTATCATAA	56061
rs3803720	snp	C/T	0.198944	0.244731	utr-variant-3-prime, nc-transcript-variant	UBFD1	GRCh38.p7	16:23571519	TCCTCCTGGAAGAGG[C/T]CTTTGTCTGCTTGGG	56061
rs4968020	snp	A/C	0.00119737	0.0244387	intron-variant, utr-variant-3-prime	UBFD1	GRCh38.p7	16:23565855	AGCCTCCCTGCCCCC[A/C]TCCCCCTGCGCCCCC	56061
rs5816218	in-del	-/T			upstream-variant-2KB, intron-variant	EARS2, UBFD1	GRCh38.p7	16:23558784	CTTTTCTTTTTCCTA[-/T]TTTTTTTTTTTTTTG	56061
rs5816219	in-del	-/T			intron-variant	UBFD1	GRCh38.p7	16:23561840	TTTTTTTTTTTTTTT[-/T]GAGGGGAGGAGGGCA	56061
rs6497675	snp	A/G	0.199254	0.244796	intron-variant	UBFD1	GRCh38.p7	16:23568783	tagtgagcagagatc[A/G]tgccactacactcca	56061
rs7198910	snp	C/G	0.178465	0.239547	upstream-variant-2KB, intron-variant	EARS2, UBFD1	GRCh38.p7	16:23559254	attggtctcttaatc[C/G]ttgaaacaggtctgt	56061
rs7199641	snp	G/T	0.198944	0.244731	intron-variant	UBFD1	GRCh38.p7	16:23559425	TCCATACATTTTTCT[G/T]TCCTTCCTTCCTTTC	56061
rs7205366	snp	A/G	0.178465	0.239547	intron-variant	UBFD1	GRCh38.p7	16:23560051	GCTTTTTGGTTTGTG[A/G]CTTTCCCCAAGTCAA	56061
rs8046838	snp	C/T	0.178785	0.239642	utr-variant-3-prime, nc-transcript-variant	UBFD1	GRCh38.p7	16:23573040	TAAGCAGTCTCTTCA[C/T]ACATTTCTTACAGTC	56061
rs8048646	snp	C/T	0.178465	0.239547	intron-variant	UBFD1	GRCh38.p7	16:23560775	caaaactctagggtt[C/T]cagataaggggttat	56061
rs9924599	snp	A/G	0.167809	0.236103	intron-variant	UBFD1	GRCh38.p7	16:23561785	GCAACACCCTTTGTC[A/G]CCCTCTTTAGTTTGA	56061
rs9932522	snp	C/T	0.178144	0.239451	intron-variant	UBFD1	GRCh38.p7	16:23570121	tctccaactgtggtc[C/T]ctggatcagtagtgt	56061
rs9938166	snp	A/C	0.178144	0.239451	utr-variant-3-prime, nc-transcript-variant	UBFD1	GRCh38.p7	16:23572039	AGGCTGTCACCCCTC[A/C]TTCTGTGAAACGTAT	56061
rs11074567	snp	C/T	0.198944	0.244731	intron-variant, utr-variant-3-prime	UBFD1	GRCh38.p7	16:23565775	TATTTTTAGACTCTA[C/T]CTTTCCAGATTTTTC	56061
rs11546237	snp	C/T			upstream-variant-2KB, synonymous-codon, nc-transcript-variant	EARS2, UBFD1	GRCh38.p7	16:23558056	GGCGGGGGCGGCGGC[C/T]GAGGACTCCGGCGCC	56061
rs11546238	snp	C/T	0.0166325	0.0896639	utr-variant-3-prime, nc-transcript-variant	UBFD1	GRCh38.p7	16:23572739	AAGCCTGCGTGAGCC[C/T]TTTTATTTTCAGTAA	56061
rs11546239	snp	A/T			utr-variant-3-prime, nc-transcript-variant	UBFD1	GRCh38.p7	16:23572793	GAGATACTATATATA[A/T]ATAATAATGTAAATG	56061
rs11546240	snp	C/T			utr-variant-3-prime, nc-transcript-variant	UBFD1	GRCh38.p7	16:23573084	CTAAATCTGTGTAAG[C/T]AAATTGAAATACTCT	56061
rs11859966	snp	A/G	0.00438332	0.0466095	intron-variant, utr-variant-3-prime	UBFD1	GRCh38.p7	16:23566471	gttcaagcgattctc[A/G]tgcttcagcctcctg	56061
rs11861416	snp	G/T			upstream-variant-2KB, intron-variant	EARS2, UBFD1	GRCh38.p7	16:23559244	aatgccccgcattgg[G/T]ctcttaatccttgaa	56061
rs11865268	snp	A/G			upstream-variant-2KB, intron-variant	EARS2, UBFD1	GRCh38.p7	16:23559078	TGTAATCTCCATTAA[A/G]AACAGGAGTTTTGTC	56061
rs12447785	snp	C/T	0.0105817	0.0719645	intron-variant, utr-variant-3-prime	UBFD1	GRCh38.p7	16:23566040	CATCCTCCTTAAACT[C/T]GCCTCAATGTCTTCT	56061
rs12447847	snp	A/C	0.408359	0.193449	intron-variant, utr-variant-3-prime	UBFD1	GRCh38.p7	16:23566309	GCCCAAGACCTTAGT[A/C]AATGCTGGGCTTGCA	56061
rs12600309	snp	A/T	0	0	intron-variant, upstream-variant-2KB	EARS2, UBFD1	GRCh38.p7	16:23556774	CTTCTTAATCCCCAG[A/T]CTCCTATCCTGTTTC	56061
rs12933091	snp	A/T			intron-variant	UBFD1	GRCh38.p7	16:23568422	ctcagcctcccaaag[A/T]gctggggttacaggc	56061
rs12934450	snp	A/G	0.0134861	0.0810011	utr-variant-3-prime, nc-transcript-variant	UBFD1	GRCh38.p7	16:23572472	CCCTTTTGTTTGCCA[A/G]TGCCCCAGTCCTAGA	56061
rs13335805	snp	A/G	0.178465	0.239547	intron-variant, utr-variant-3-prime, downstream-variant-500B	UBFD1	GRCh38.p7	16:23565068	GAGCCCAAGGGGCAG[A/G]CAGTCTTGTCACTTG	56061
rs28589459	snp	A/G	0.178465	0.239547	intron-variant, utr-variant-3-prime, downstream-variant-500B	UBFD1	GRCh38.p7	16:23564915	CTGTAGAAGAAGCTC[A/G]ATATGTTGGGGCTTC	56061
rs28703267	snp	C/G	0.178465	0.239547	intron-variant, upstream-variant-2KB	EARS2, UBFD1	GRCh38.p7	16:23555747	GGGCTGCAGTGCGGT[C/G]GCACGATCTCGGCTC	56061
rs34119136	in-del	-/T			intron-variant	UBFD1	GRCh38.p7	16:23568178	TTTTTTTTTTTTTTT[-/T]GAGACGGAATCTCGC	56061
rs34236329	in-del	-/C			intron-variant	UBFD1	GRCh38.p7	16:23563752	CTGGCCCGTTTGCCC[-/C]TGTGGTCCCCTGTGT	56061
rs34420435	in-del	-/C			intron-variant	UBFD1	GRCh38.p7	16:23568888	TTTTAACTGGGCCCC[-/C]ATCACTCCTTTTTGA	56061
rs34565239	in-del	-/T			intron-variant	UBFD1	GRCh38.p7	16:23563859	CCTGGAATGCCTTTT[-/T]CCCATTCCTTGTTAT	56061
rs34658602	snp	A/T	0	0	utr-variant-3-prime, nc-transcript-variant	UBFD1	GRCh38.p7	16:23570948	AAGCTTTGTTTTTTT[A/T]AAAAAAAAAAAAAGC	56061
rs34674471	in-del	-/G			utr-variant-3-prime, nc-transcript-variant	UBFD1	GRCh38.p7	16:23573737	TTTCACCCAGAAGGG[-/G]CTCGTTTTCCTCTTA	56061
rs34886395	snp	A/G			intron-variant	UBFD1	GRCh38.p7	16:23569608	AACTGTCACAAACCC[A/G]TATATCCATCACTGA	56061
rs35019787	snp	A/G	0.00830493	0.0639022	synonymous-codon, nc-transcript-variant	UBFD1	GRCh38.p7	16:23562221	GTTTTCCTTTATCCA[A/G]CACTTTCCTGTGTTG	56061
rs35099614	in-del	-/C	0.419616	0.183658	intron-variant	UBFD1	GRCh38.p7	16:23569721	CCACTGTCTTCCCCT[-/C]CCCCCATTACCATCG	56061
rs35228710	in-del	-/AG	0.31721	0.240796	intron-variant	UBFD1	GRCh38.p7	16:23562385	TTTTTTTTTTGAGAC[-/AG]AGTCTTGCTCTGTCA	56061
rs35735620	in-del	-/G			intron-variant	UBFD1	GRCh38.p7	16:23563074	GGAGATTTCACTAAT[-/G]CTGATTTTTTTTTTT	56061
rs35806735	in-del	-/C			intron-variant	UBFD1	GRCh38.p7	16:23568953	GTAGCCTGACTTTTC[-/C]AAGCAGTGTGGTGGT	56061
rs35833863	in-del	-/G			intron-variant, upstream-variant-2KB	EARS2, UBFD1	GRCh38.p7	16:23556752	AGTAAAGCCTTCTGG[-/G]AGCGTCCTTCTTAAT	56061
rs56743182	snp	C/T	0.046775	0.145601	downstream-variant-500B	UBFD1	GRCh38.p7	16:23574641	GCCCTGGCTTCCACA[C/T]GTTGGAAGAGAAGCT	56061
rs56982275	snp	A/G			intron-variant, utr-variant-3-prime	UBFD1	GRCh38.p7	16:23565529	CATTTCAGGATGAAA[A/G]GTGTTTTAAAAGTTT	56061
rs57651254	snp	C/T	0.0279526	0.114869	intron-variant, utr-variant-3-prime	UBFD1	GRCh38.p7	16:23565814	AAGGCTGCAAGTTTT[C/T]TTCCACTTGGTTTAG	56061
rs57903553	in-del	-/A	0.499859	0.0083854	utr-variant-3-prime, nc-transcript-variant	UBFD1	GRCh38.p7	16:23570949	AGCTTTGTTTTTTTT[-/A]AAAAAAAAAAAAGCA	56061
rs74014939	snp	A/G	0.0463947	0.145069	intron-variant	UBFD1	GRCh38.p7	16:23560180	CTGATGGATTTGTTT[A/G]TTTATTTTTTTGTCC	56061
rs74014940	snp	C/T	0.046775	0.145601	intron-variant	UBFD1	GRCh38.p7	16:23568922	GTTTGTGTTGCCAGT[C/T]ACACCCTGTAGGGTT	56061
rs74014941	snp	C/T	0.046775	0.145601	utr-variant-3-prime, nc-transcript-variant	UBFD1	GRCh38.p7	16:23574043	ATAGTGCCTGGCGGC[C/T]TTTCTGAAGTTACAG	56061
rs74014942	snp	A/T	0.00795532	0.062565	downstream-variant-500B	UBFD1	GRCh38.p7	16:23574832	AAATGGGCCAGGCTC[A/T]CTGGCTCACACCGGT	56061
rs74462606	snp	C/T	0.0256215	0.110247	intron-variant	UBFD1	GRCh38.p7	16:23563781	GTATTTTAGCCGCAT[C/T]TCTCTGTGAAGCTCC	56061
rs74550389	snp	A/T	0.5	0	utr-variant-3-prime, nc-transcript-variant	UBFD1	GRCh38.p7	16:23573459	GAGCCAGGCCCCCCT[A/T]AGCTCTGCTTCAGAT	56061
rs75058902	snp	A/G	0.5	0	utr-variant-3-prime, nc-transcript-variant	UBFD1	GRCh38.p7	16:23574135	TCTACTGCTTTCTCA[A/G]TTTCTAAGAACCTTT	56061
rs75526851	snp	G/T	0.0295035	0.117819	intron-variant, upstream-variant-2KB	EARS2, UBFD1	GRCh38.p7	16:23555774	GCTCACTGCAACCTC[G/T]TTCTCCTGGGTTCAA	56061
rs75598210	snp	A/G	0.0337553	0.125452	intron-variant	UBFD1	GRCh38.p7	16:23563668	GCTGTTTAAGGACAC[A/G]TTCAAATGCCTAACC	56061
rs75636406	snp	A/G	0.185472	0.241529	intron-variant	UBFD1	GRCh38.p7	16:23567813	GCGGGGCCTCCGGCC[A/G]TTGTTCATCCAAGGA	56061
rs75702871	snp	C/G	0.0023933	0.0345097	intron-variant	UBFD1	GRCh38.p7	16:23561699	CAGTTAGACGGATTA[C/G]CAGCATCTTATAGTG	56061
rs75745227	snp	A/G	0.0295035	0.117819	intron-variant	UBFD1	GRCh38.p7	16:23563636	TTATCCTGGGTACCC[A/G]TGCTCAAGGACCTTT	56061
rs75765954	snp	C/T	0.0182019	0.0936463	intron-variant	UBFD1	GRCh38.p7	16:23562351	CTCCAATCCTGTCCC[C/T]TCTCTTTTTTCCCTG	56061
rs75931753	snp	C/T	0.0146672	0.084371	utr-variant-3-prime, nc-transcript-variant	UBFD1	GRCh38.p7	16:23574039	CGTAATAGTGCCTGG[C/T]GGCCTTTCTGAAGTT	56061
rs76152717	snp	A/G	0.0256215	0.110247	intron-variant	UBFD1	GRCh38.p7	16:23563445	TCTCCCTTCCCCCAG[A/G]TGGTTACAAAGTCTT	56061
rs76276261	snp	A/G	0.00478085	0.0486577	intron-variant	UBFD1	GRCh38.p7	16:23561426	GAAGAAAGAAGACTC[A/G]GGCATTTGGGCCAGG	56061
rs76286086	snp	A/T	0	0	intron-variant	UBFD1	GRCh38.p7	16:23563079	ATTTCACTAATCTGA[A/T]TTTTTTTTTTTTTTT	56061
rs76867025	snp	A/G	0.0295035	0.117819	intron-variant, upstream-variant-2KB	EARS2, UBFD1	GRCh38.p7	16:23555951	ACCCAAATAAAATGA[A/G]ATTGGTTTGTATTTT	56061
rs77282410	snp	A/T	0.209388	0.246679	utr-variant-3-prime, nc-transcript-variant	UBFD1	GRCh38.p7	16:23570949	AGCTTTGTTTTTTTT[A/T]AAAAAAAAAAAAGCA	56061
rs77663743	snp	A/G	0.00557542	0.0525036	utr-variant-3-prime, nc-transcript-variant	UBFD1	GRCh38.p7	16:23574059	TTTCTGAAGTTACAG[A/G]TGGTTGGGAGCCCTC	56061
rs77999475	snp	A/C			intron-variant	UBFD1	GRCh38.p7	16:23564483	CTGCTAGATCATTCT[A/C]TTCTGTAGAGCCTGT	56061

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