SNP - dbSNP |
dbSNP | Type | Alleles | Het | Se(het) | Fxn-class | Gene Name | Assembly | Chr-pos | Sequence | Entrez Gene |
rs369856 | snp | C/T | 0.437118 | 0.165792 | downstream-variant-500B | GGA2 | GRCh38.p7 | 16:23463343 | TCTAAGTAATTCATA[C/T]TGATAATGGCATTTT | 23062 |
rs488131 | snp | A/G | 0.291493 | 0.246533 | utr-variant-3-prime | GGA2 | GRCh38.p7 | 16:23463819 | CTGCCACGCCCAGCT[A/G]ATGTTGCAGTTTTTC | 23062 |
rs494279 | snp | A/G | 0.00318978 | 0.0398085 | utr-variant-3-prime | GGA2 | GRCh38.p7 | 16:23467315 | ACTGTAGCAGAGATG[A/G]TGATGATGAGAAATG | 23062 |
rs722069 | snp | C/T | 0.455024 | 0.143057 | intron-variant | GGA2 | GRCh38.p7 | 16:23495619 | CTTTGTCTCTCAAGA[C/T]TGTTTTAGGGTTAAG | 23062 |
rs727238 | snp | A/G | 0.420733 | 0.18262 | intron-variant | GGA2 | GRCh38.p7 | 16:23509745 | CGTATATATATATAT[A/G]TGTGTTTTTTTTTTC | 23062 |
rs739498 | snp | C/T | 0.0912534 | 0.193131 | intron-variant | GGA2 | GRCh38.p7 | 16:23505353 | CTGTTTTTAATAGCG[C/T]AAGGCTAGCAACACC | 23062 |
rs867131 | snp | A/G | 0.0577344 | 0.159793 | intron-variant | GGA2 | GRCh38.p7 | 16:23505979 | CATTAGGCTTTTATA[A/G]CTGCAAGTAATTGAA | 23062 |
rs1056961 | snp | C/T | 0 | 0 | utr-variant-3-prime | GGA2 | GRCh38.p7 | 16:23464625 | CATTTGGCCTGTTTT[C/T]TAAATAATCCCACAT | 23062 |
rs1056962 | snp | C/T | | | utr-variant-3-prime | GGA2 | GRCh38.p7 | 16:23464531 | GCCTCTGTCCCAATT[C/T]TGAGTAACAGCTCTG | 23062 |
rs1071685 | snp | C/G | 0.375601 | 0.216158 | synonymous-codon, utr-variant-5-prime | GGA2 | GRCh38.p7 | 16:23510322 | GCTGGAGCTGTGGCT[C/G]AGTGAGTAGCCTGGC | 23062 |
rs1135045 | snp | C/G | 0.368479 | 0.220142 | missense | GGA2 | GRCh38.p7 | 16:23478390 | CTGGACCTCCTCTCA[C/G]CACAGCCAGCTCCGT | 23062 |
rs1135088 | snp | C/G | 0.0562307 | 0.157967 | utr-variant-3-prime | GGA2 | GRCh38.p7 | 16:23465892 | gtgcggtggtataat[C/G]tcagctcactgcaat | 23062 |
rs1141325 | snp | A/G | 0 | 0 | utr-variant-3-prime | GGA2 | GRCh38.p7 | 16:23465260 | CAGTGGCTCACGCCT[A/G]TAATCCCAGCATTTT | 23062 |
rs1427880 | snp | A/C | 0 | 0 | intron-variant | GGA2 | GRCh38.p7 | 16:23506506 | TCACCAGATACTGCC[A/C]TGTTTCCCCAGGGTT | 23062 |
rs2040574 | snp | C/T | 0.279195 | 0.248289 | intron-variant, utr-variant-5-prime | GGA2 | GRCh38.p7 | 16:23499005 | CTCCCCCTGTTCTCT[C/T]CCTGCCTCTGCTCTT | 23062 |
rs2097662 | snp | G/T | 0.429238 | 0.174281 | upstream-variant-2KB | GGA2 | GRCh38.p7 | 16:23512024 | agcacaaccttccag[G/T]ttctagcctttcttt | 23062 |
rs2239951 | snp | A/G | 0.428333 | 0.175206 | intron-variant | GGA2 | GRCh38.p7 | 16:23493672 | TAAGCTATTTCCTGG[A/G]CATAAACCTCAGGCA | 23062 |
rs2285521 | snp | A/G | 0.472318 | 0.114344 | utr-variant-5-prime | GGA2 | GRCh38.p7 | 16:23510459 | CCAGGACGCTACAGC[A/G]GCTGAAGAGGCAGTG | 23062 |
rs2285522 | snp | A/G | 0.416322 | 0.186646 | utr-variant-5-prime | GGA2 | GRCh38.p7 | 16:23510429 | GGCGCCCGCGGCCGC[A/G]GCGTCGGGGCTGGAG | 23062 |
rs2369012 | snp | C/T | 0.429688 | 0.173817 | intron-variant, upstream-variant-2KB | GGA2 | GRCh38.p7 | 16:23504013 | GCTCACCGCAACCTC[C/T]GTCTCCCGGGTTCAA | 23062 |
rs2369013 | snp | A/G | 0.447032 | 0.153878 | intron-variant | GGA2 | GRCh38.p7 | 16:23485025 | ttccattgtgtggct[A/G]tgccacagtttgttt | 23062 |
rs3208913 | snp | C/T | 0 | 0 | intron-variant | GGA2 | GRCh38.p7 | 16:23494016 | GGCAAGTTCATGTGC[C/T]TTTTCTAGAGAGGGC | 23062 |
rs3785408 | snp | A/G | 0.279726 | 0.248226 | intron-variant | GGA2 | GRCh38.p7 | 16:23508665 | GAGCAGAGGTTTGGA[A/G]AGAGAGCGTGGGGAG | 23062 |
rs4018195 | in-del | -/TG | 0.34437 | 0.231505 | utr-variant-3-prime | GGA2 | GRCh38.p7 | 16:23466677 | TAAGATGGGAAACTG[-/TG]NGTACAGATAGACAT | 23062 |
rs4115667 | snp | A/C | | | utr-variant-3-prime | GGA2 | GRCh38.p7 | 16:23466724 | TGATGAATCGGCCAA[A/C]AGCCAGCCCTTGCCA | 23062 |
rs4332751 | snp | A/G | 0.184203 | 0.241186 | intron-variant | GGA2 | GRCh38.p7 | 16:23490463 | TCCACagccgggagc[A/G]gtggctcacgcctgt | 23062 |
rs4558420 | snp | C/T | 0.44755 | 0.153212 | intron-variant | GGA2 | GRCh38.p7 | 16:23484147 | gcacagtggctcaca[C/T]ctgtaatcccagcac | 23062 |
rs4967955 | snp | C/G | 0.269809 | 0.249214 | intron-variant | GGA2 | GRCh38.p7 | 16:23471202 | GTCTCTTTTATATGA[C/G]TACAAACACACACAT | 23062 |
rs4967956 | snp | A/G | 0.437824 | 0.164991 | intron-variant | GGA2 | GRCh38.p7 | 16:23477704 | gtgagctgagatcgc[A/G]ccactgcactccacc | 23062 |
rs4967957 | snp | C/T | 0.0607341 | 0.163335 | intron-variant | GGA2 | GRCh38.p7 | 16:23494671 | GCCCAGTCCCATGAG[C/T]AGCCACAGCAGCACA | 23062 |
rs4968005 | snp | A/G | 0.178785 | 0.239642 | utr-variant-3-prime | GGA2 | GRCh38.p7 | 16:23467214 | GTGGATGAATGGAAC[A/G]AACGATACATGAAAA | 23062 |
rs4968006 | snp | A/G | 0.337158 | 0.234315 | intron-variant | GGA2 | GRCh38.p7 | 16:23476710 | TACAAAAAAAGCAAA[A/G]AAGGAACGTTCAACC | 23062 |
rs4968007 | snp | A/G | 0.5 | 0 | intron-variant | GGA2 | GRCh38.p7 | 16:23478208 | CGTCTCAAAAAAAAA[A/G]AAAAAAGAAAAAAAG | 23062 |
rs4968008 | snp | G/T | 0.356402 | 0.226275 | intron-variant | GGA2 | GRCh38.p7 | 16:23479032 | AAATAAGCAACTTAC[G/T]GAAGGTCATGTGACT | 23062 |
rs4968010 | snp | C/T | 0.02016 | 0.0983543 | intron-variant | GGA2 | GRCh38.p7 | 16:23481144 | agcattttgggaggc[C/T]gaggcgggtggatca | 23062 |
rs4968011 | snp | C/T | 0.29175 | 0.246489 | intron-variant | GGA2 | GRCh38.p7 | 16:23489237 | TGTGCAAATTCACAA[C/T]ATTTTTGTTGTTTTT | 23062 |
rs4968013 | snp | G/T | 0.27893 | 0.24832 | intron-variant, utr-variant-5-prime | GGA2 | GRCh38.p7 | 16:23501271 | TGGTAGCATCGCTCT[G/T]TGTCCTACTAATTGG | 23062 |
rs5816214 | in-del | -/C | 0.279726 | 0.248226 | intron-variant | GGA2 | GRCh38.p7 | 16:23506893 | TCTGTGAGGCCAGGT[-/C]CCCCCTTTTTGCTCT | 23062 |
rs6497664 | snp | C/G | 0.447162 | 0.153712 | intron-variant | GGA2 | GRCh38.p7 | 16:23474032 | CCTGAGTTGTGTCCT[C/G]CTCTGCATACTGGTG | 23062 |
rs6497666 | snp | C/T | 0.287606 | 0.247155 | intron-variant | GGA2 | GRCh38.p7 | 16:23484356 | ccgggaggcagaagt[C/T]gtgcggagctgagat | 23062 |
rs7185600 | snp | C/T | 0.447032 | 0.153878 | intron-variant | GGA2 | GRCh38.p7 | 16:23477568 | ctaacacagtgaaac[C/T]ccatctctactaaaa | 23062 |
rs7190131 | snp | C/T | 0.428937 | 0.17459 | intron-variant | GGA2 | GRCh38.p7 | 16:23490828 | TATTTTATGTCTGCA[C/T]GTTGTTACTTTTATC | 23062 |
rs7202661 | snp | A/C | 0.283947 | 0.247685 | intron-variant | GGA2 | GRCh38.p7 | 16:23492720 | agggaattatggaat[A/C]tggggcggtgggggt | 23062 |
rs7203580 | snp | A/G | 0.29432 | 0.24604 | intron-variant | GGA2 | GRCh38.p7 | 16:23492927 | cCCATGGCCAGCATC[A/G]GCACTGTTGTGGGAA | 23062 |
rs7204714 | snp | A/C | 0.324382 | 0.238678 | intron-variant | GGA2 | GRCh38.p7 | 16:23472032 | AGCAACCTTTTCAGA[A/C]GGGAAATTGGTAATG | 23062 |
rs8054517 | snp | A/G | 0.00673275 | 0.0576285 | intron-variant | GGA2 | GRCh38.p7 | 16:23483036 | TGGTTCATGACACAC[A/G]CCCAGGCACCCCATA | 23062 |
rs8061917 | snp | G/T | 0.0566069 | 0.158427 | intron-variant, utr-variant-5-prime | GGA2 | GRCh38.p7 | 16:23501754 | GAAACAACAAAATTA[G/T]GATTTTCTTTTTTTG | 23062 |
rs9302410 | snp | C/T | 0.439641 | 0.162899 | intron-variant, utr-variant-5-prime | GGA2 | GRCh38.p7 | 16:23500051 | AAGGAAGAGGAGCTC[C/T]CTCTGTGCTCTCTTC | 23062 |
rs9745351 | snp | A/G | 0.0138799 | 0.0821421 | intron-variant | GGA2 | GRCh38.p7 | 16:23472524 | TTTTAACAGCAAACA[A/G]GTAGAAAGAAATTGA | 23062 |
rs9927961 | snp | A/G | 0.428333 | 0.175206 | intron-variant, upstream-variant-2KB | GGA2 | GRCh38.p7 | 16:23503204 | CCACTGTCGATTTGC[A/G]ATTTCCTCCTCCAAC | 23062 |
rs9928410 | snp | A/G | 0.0726307 | 0.176182 | intron-variant | GGA2 | GRCh38.p7 | 16:23490510 | gaggctgaggcaggc[A/G]gatcatttgaggttg | 23062 |
rs9932261 | snp | C/T | 0.178785 | 0.239642 | intron-variant | GGA2 | GRCh38.p7 | 16:23509582 | GGAATATTCTTTATC[C/T]CCTTTGAACCTCAAT | 23062 |
rs9933261 | snp | A/G | 0.438526 | 0.164189 | intron-variant | GGA2 | GRCh38.p7 | 16:23504631 | AGCTGGGTCTGACCA[A/G]GCCACAGCAACCGCC | 23062 |
rs9936146 | snp | A/T | 0.188316 | 0.242271 | intron-variant | GGA2 | GRCh38.p7 | 16:23489408 | CCCAGGTAATTTTTT[A/T]AAAAAATTTTTTGTA | 23062 |
rs9938478 | snp | C/T | 0.166832 | 0.235761 | upstream-variant-2KB | GGA2 | GRCh38.p7 | 16:23512124 | accatgtttgaaagg[C/T]ggaagaagagaccca | 23062 |
rs9939086 | snp | A/G | 0.184203 | 0.241186 | intron-variant | GGA2 | GRCh38.p7 | 16:23471800 | cattctagctacctg[A/G]gggtctgaggcagga | 23062 |
rs10153059 | snp | C/T | 0.436692 | 0.166271 | intron-variant, utr-variant-5-prime | GGA2 | GRCh38.p7 | 16:23501062 | CATAAAGCACAGATA[C/T]GCAAATAGATCTCTG | 23062 |
rs10686275 | in-del | -/GAAA | 0 | 0 | intron-variant | GGA2 | GRCh38.p7 | 16:23475954 | AAAGAAAAAAACAAA[-/GAAA]AGCACTTAAAATGTC | 23062 |
rs10716091 | in-del | -/A | 0.0425829 | 0.139564 | intron-variant | GGA2 | GRCh38.p7 | 16:23497111 | TCCTGCCTCAAAAAC[-/A]AAAAAAAAAAACAAC | 23062 |
rs11074559 | snp | A/G | 0.374315 | 0.2169 | intron-variant | GGA2 | GRCh38.p7 | 16:23474876 | CCAGGGAAAAAAAAA[A/G]AAAGGTGGGGAGTGA | 23062 |
rs11074560 | snp | A/G | 0.42574 | 0.177808 | intron-variant | GGA2 | GRCh38.p7 | 16:23482035 | actttgggaagccga[A/G]gcagacggatcacta | 23062 |
rs11074561 | snp | C/T | 0.479502 | 0.0991411 | intron-variant | GGA2 | GRCh38.p7 | 16:23484374 | gcggagctgagatca[C/T]gcaattgcactccag | 23062 |
rs11074562 | snp | A/G | 0.437401 | 0.165472 | intron-variant | GGA2 | GRCh38.p7 | 16:23488379 | AAGACCCAGGATGCA[A/G]TGTCTGCCTAAGAAC | 23062 |
rs11074563 | snp | C/G | 0.317451 | 0.240729 | upstream-variant-2KB | GGA2 | GRCh38.p7 | 16:23511972 | aattattttgcattg[C/G]tatcaacttaacaga | 23062 |
rs11282065 | in-del | -/GCTGTCTACA | | | upstream-variant-2KB | GGA2 | GRCh38.p7 | 16:23511977 | TTTGCATTGGTATCA[-/GCTGTCTACA]ACTTAACAGAGTTAT | 23062 |
rs11540711 | snp | G/T | 0 | 0 | missense | GGA2 | GRCh38.p7 | 16:23474999 | CTAAGTCCTCTCCAG[G/T]TTGGTCCTGGGAGGC | 23062 |
rs11641480 | snp | A/T | 0.0425829 | 0.139564 | intron-variant | GGA2 | GRCh38.p7 | 16:23493034 | GGACAAGGCAGGAGG[A/T]GATAGGAAACTTTCA | 23062 |
rs11644399 | snp | A/C | | | intron-variant | GGA2 | GRCh38.p7 | 16:23497039 | gaagtggaaagactg[A/C]ggctgcagtgagcca | 23062 |
rs11645794 | snp | G/T | 0.00470586 | 0.0482782 | intron-variant | GGA2 | GRCh38.p7 | 16:23488825 | GCTAGCAAAGCACTG[G/T]CAACAGCCTTCAAAG | 23062 |
rs11647801 | snp | A/C | 0 | 0 | splice-donor-variant | GGA2 | GRCh38.p7 | 16:23494301 | AGGCAAGCCAAACTC[A/C]CCGTTAAGGCATAAA | 23062 |
rs11861353 | snp | A/C | 0.029116 | 0.117091 | intron-variant | GGA2 | GRCh38.p7 | 16:23508032 | TTTTATCTCCTCCAC[A/C]TGAGGCAGCTACTTT | 23062 |
rs11861512 | snp | A/C | 0.00655451 | 0.0568708 | synonymous-codon | GGA2 | GRCh38.p7 | 16:23474923 | CTTAACAGACTCCAA[A/C]GGGACAAACACTTGA | 23062 |
rs12325456 | snp | C/T | | | intron-variant | GGA2 | GRCh38.p7 | 16:23470954 | cccacctcagcctcc[C/T]tagtagctgggatta | 23062 |
rs12598472 | snp | C/T | 0.00636936 | 0.0560724 | intron-variant | GGA2 | GRCh38.p7 | 16:23479996 | TCAAATGGTAACGCC[C/T]TCCCTGCCCTTCCAA | 23062 |
rs12920008 | snp | C/G | 0 | 0 | intron-variant | GGA2 | GRCh38.p7 | 16:23495396 | CCCCACATGAATTTG[C/G]TAATTTTAGAAAAAT | 23062 |
rs12921516 | snp | G/T | 0.42357 | 0.179927 | intron-variant | GGA2 | GRCh38.p7 | 16:23510082 | GTGCTGCTGCTAAGT[G/T]GGGGGGTGGGCGGAG | 23062 |
rs13330465 | snp | A/T | | | intron-variant | GGA2 | GRCh38.p7 | 16:23509395 | GTGACGACCCCCAGG[A/T]AAACCAACTCCTACC | 23062 |
rs13331947 | snp | A/T | 0 | 0 | intron-variant | GGA2 | GRCh38.p7 | 16:23489586 | gatcacagggcaaca[A/T]ccaagtaacctgaaa | 23062 |
rs13334394 | snp | C/T | 0.179744 | 0.239925 | intron-variant | GGA2 | GRCh38.p7 | 16:23496682 | aaaattaagaccagg[C/T]gcgatggctcacgcc | 23062 |
rs13337568 | snp | C/T | 0.0528381 | 0.153711 | intron-variant | GGA2 | GRCh38.p7 | 16:23486406 | AAGTCCTCTGAAAAG[C/T]AGATTCCTAAACCTG | 23062 |
rs16940153 | snp | C/G | 0.0142736 | 0.0832652 | utr-variant-3-prime | GGA2 | GRCh38.p7 | 16:23466910 | AGGAACTCTGTCCAG[C/G]GGCGATTCTAAGGCA | 23062 |
rs16940203 | snp | C/T | 0.0142736 | 0.0832652 | intron-variant | GGA2 | GRCh38.p7 | 16:23497235 | GCTCTGGAAATGAGG[C/T]GTTGCTTCTCGGGGC | 23062 |
rs17742339 | snp | A/G | 0.0166325 | 0.0896639 | intron-variant | GGA2 | GRCh38.p7 | 16:23482752 | TCTTACTGAAGCCTG[A/G]ATCCTGCTGGAAGTC | 23062 |
rs17742393 | snp | C/G | 0.0130921 | 0.0798413 | intron-variant | GGA2 | GRCh38.p7 | 16:23488889 | ATCTCTTAGGAGAAT[C/G]CAAGGGACCATGGTG | 23062 |
rs28377904 | snp | C/G | 0.0531684 | 0.154134 | intron-variant | GGA2 | GRCh38.p7 | 16:23508936 | GATTTCTCCTTGTCC[C/G]CTGTCTGCATTCCAA | 23062 |
rs28504053 | snp | A/G | | | intron-variant | GGA2 | GRCh38.p7 | 16:23475939 | CATCTCAGGAAAAAA[A/G]AAAGAAAAAAACAAA | 23062 |
rs28523543 | snp | C/G | | | intron-variant | GGA2 | GRCh38.p7 | 16:23475951 | AAAAAAAGAAAAAAA[C/G]AAAAGCACTTAAAAT | 23062 |
rs28709586 | snp | A/G | 0.00557542 | 0.0525036 | intron-variant, utr-variant-5-prime | GGA2 | GRCh38.p7 | 16:23502450 | CAACAAAAGAGGAAC[A/G]TCTGGGTTCAAACCT | 23062 |
rs34105270 | snp | G/T | | | intron-variant | GGA2 | GRCh38.p7 | 16:23488748 | AAGACACCGATATGG[G/T]ACCCAGAAACTTCAG | 23062 |
rs34111733 | in-del | -/TTGAGGCTGA | | | intron-variant | GGA2 | GRCh38.p7 | 16:23497040 | AGTGGAAAGACTGCG[-/TTGAGGCTGA]GCTGCAGTGAGCCAA | 23062 |
rs34124439 | snp | A/C | | | intron-variant | GGA2 | GRCh38.p7 | 16:23491297 | AGGTAACAGGGCAAC[A/C]CCTTGTCTCAAAAAA | 23062 |
rs34195789 | in-del | -/T/TT/TTT | 0.5 | 0 | intron-variant, utr-variant-5-prime | GGA2 | GRCh38.p7 | 16:23499145 | TTTTTTTTTTTTTTT[-/T/TT/TTT]GATATGGAGTCTCGC | 23062 |
rs34298112 | snp | G/T | | | intron-variant | GGA2 | GRCh38.p7 | 16:23482051 | GCAGACGGATCACTA[G/T]AGGCCAGAAGTTTGA | 23062 |
rs34320769 | in-del | -/G | | | intron-variant | GGA2 | GRCh38.p7 | 16:23489217 | ACAACAAAACACTGG[-/G]AAAGTGTGCAAATTC | 23062 |
rs34362662 | in-del | -/A | | | intron-variant | GGA2 | GRCh38.p7 | 16:23498182 | TACTCAGTAGGGTGA[-/A]GGCAGGAGAATCGCT | 23062 |
rs34512798 | in-del | -/C | | | intron-variant | GGA2 | GRCh38.p7 | 16:23479101 | CTCTGAACTGCCCAG[-/C]AACACCTGATTCCCT | 23062 |
rs34560583 | in-del | -/AAAG | 0.437965 | 0.164831 | intron-variant | GGA2 | GRCh38.p7 | 16:23475951 | AAAAAAGAAAAAAAC[-/AAAG]AAAAGCACTTAAAAT | 23062 |
rs34615748 | in-del | -/AAAC | | | intron-variant | GGA2 | GRCh38.p7 | 16:23470764 | AACAAACAAACAAAC[-/AAAC]AAAAAACAAAAAGCC | 23062 |
rs34685392 | in-del | -/G | | | intron-variant | GGA2 | GRCh38.p7 | 16:23498179 | AGCTACTCAGTAGGG[-/G]TGAGGCAGGAGAATC | 23062 |
rs34718877 | in-del | -/A | | | intron-variant, upstream-variant-2KB | GGA2 | GRCh38.p7 | 16:23503655 | CACAAGAACTTAAAA[-/A]TGTTGTGTAAAATAC | 23062 |