iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

PPI - IID
Symbol 1	Symbol 2	PMID	DBs	Evidence Type	Adipose Tissue	Adrenal Gland	Amygdala	Bone	Bone Marrow	Brain	Dorsal Root Ganglia	Eye	Heart	Hindgut	Hypothalamus	Kidney	Liver	Lung	Lymph Nodes	Mammary Gland	Midgut	Neurons	Ovary	Pancreas	Pituitary Gland	Placenta	Prostate	Salivary Gland	Skeletal Muscle	Small Intestine	Spleen	Stomach	Testes	Uterus
CORO7	SETD4	26496610	biogrid,intact	exp	P	P	G		P	GP				GP	G	P		GP	GP		GP	GP		P		GP	P	P		GP	GP	P	GP
CORO7	RBX1	21130766	biogrid,mint,intact	exp			G	G	G	GP			P	G	G			GP	G		G	GP		P		GP	P			G	G		GP
CORO7	TCEB2	21130766	biogrid,mint,intact	exp			G	G	G	G				G	G			G	G		G	G				G				G	G		G
TOB1	CORO7	21130766	biogrid	exp	P	P	G	G	GP	GP			P	GP	G	P		GP	GP		GP	GP		P		GP	P	P	P	GP	GP	P	GP
CORO7	KLHL20	26186194,24768539	biogrid	exp	P	P	G	G	GP	GP			P	GP	G	P		GP	GP		GP	GP		P		GP	P	P	P	GP	GP	P	GP
JUN	CORO7	24768539	biogrid	exp	P	P	G	G	G	GP				GP	G	P		GP	G		GP	GP				GP		P		GP	G	P	G
CORO7	TCEB1	21130766	biogrid,mint,intact	exp			G	G	G	G				G	G			G	G		G	G				G				G	G		G
BLM	CORO7	26496610	biogrid,intact	exp	P	P	G	G	GP	GP			P	GP	G	P		GP	GP		GP	GP		P		GP	P	P	P	GP	GP	P	GP
CORO7	ZRANB1	24768539	biogrid	exp	P	P	G	G	GP	GP				GP	G	P		GP	GP		GP	GP				GP	P	P	P	GP	G	P	GP
CDC34	CORO7	21130766	biogrid,mint,intact	exp	P	P	G	G	GP	GP			P	GP	G	P		GP	GP		GP	GP		P		GP	P	P	P	GP	GP	P	GP
CORO7	DAG1	22939629	biogrid	exp			G	G	G	GP			P	GP	G	P		GP	G		G	GP		P		GP	P		P	G	G	P	GP
THBS3	CORO7	26186194	biogrid	exp		P	G	G	G	GP			P	GP	G	P		GP	G		GP	GP		P		GP	P	P	P	GP	G	P	GP
S100A4	CORO7	26496610	biogrid,intact	exp			G	G	GP	G				G	G			GP	GP		G	G				GP				G	GP		G
CORO7	MMGT1	26496610	biogrid,intact	exp	P	P	G	G	G	GP			P	GP	G	P		GP	GP		GP	GP		P		GP	P	P	P	GP	G	P	GP
CORO7	MRPL50	26496610	biogrid,intact	exp	P	P	G	G	GP	GP			P	GP	G	P		GP	GP		GP	GP		P		GP	P	P	P	GP	GP	P	GP
CORO7	AP1M1	16905771	biogrid	exp	P	P	G	G	GP	GP			P	GP	G	P		GP	G		GP	GP		P		GP	P	P	P	GP	G	P	GP
NTRK1	CORO7	25921289	biogrid	exp	P	P				P			P	P		P					P	P		P		P	P	P	P	P		P	P
CORO7	ACTB	24768539	biogrid	exp	P	P	G	G	GP	GP			P	GP	G	P		GP	GP		GP	GP		P		GP	P	P	P	GP	GP	P	GP
AP1G1	CORO7	16905771	biogrid	exp	P	P	G	G	GP	GP			P	GP	G	P		GP	GP		GP	GP		P		GP	P	P	P	GP	GP	P	GP
CORO7	CUL1	21130766	biogrid,mint,intact	exp	P		G	G	G	GP			P	GP	G	P		GP	G		GP	GP		P		GP	P	P	P	GP	GP	P	GP
CORO7	CORO7	23606334	intact	exp	P	P	G	G	GP	GP			P	GP	G	P		GP	GP		GP	GP		P		GP	P	P	P	GP	GP	P	GP
EPS15	CORO7	24768539	biogrid	exp	P	P	G	G	GP	GP			P	GP	G	P		GP	GP		GP	GP		P		GP	P	P	P	GP	GP	P	GP
CORO7	AP2M1	16905771, 21836163	biogrid	exp, pred	P	P	G	G	G	GP			P	GP	G	P		GP	GP		GP	GP		P		GP				GP	G	P	GP
SRC	CORO7	18581049, 21836163	biogrid	exp, pred	P	P	G			GP			P	G	G	P		G	G		GP	GP					P	P		GP	GP	P	GP
CORO7	SAR1A	21836163		pred	P	P	G	G	GP	GP			P	GP	G	P		GP	GP		GP	GP		P		GP	P	P	P	GP	GP	P	GP
CORO7	SYT11	21836163		pred	P	P	G	G	G	GP				GP	G	P		G	G		GP	GP								GP	G		G
CORO7	GGA1	21836163		pred	P	P	G	G	GP	GP			P	GP	G	P		GP	GP		GP	GP		P		GP	P	P		GP	GP	P	GP
VPS41	CORO7	21836163		pred	P	P	G	G	GP	GP			P	GP	G	P		GP	GP		GP	GP		P		GP	P	P	P	GP	GP	P	GP
CORO7	SNF8	21836163		pred	P	P	G	G	GP	GP			P	GP	G	P		GP	GP		GP	GP		P		GP	P	P	P	GP	GP	P	GP
SEC24C	CORO7	21836163		pred	P	P	G	G	GP	GP			P	GP	G	P		GP	GP		GP	GP		P		GP	P	P	P	GP	GP	P	GP
ARF4	CORO7	21836163		pred			G	G	G	G				G	G			G	G		G	G				G				G	G		G
ARFIP1	CORO7	21836163		pred	P	P	G	G	GP	GP			P	GP	G	P		GP	GP		GP	GP		P		GP	P	P	P	GP	GP	P	GP
SEC13	CORO7	21836163		pred	P	P	G	G	GP	GP			P	GP	G			G	G		GP	GP		P		GP	P	P		GP	GP	P	G
SNAP91	CORO7	21836163		pred			G			GP				P	G							GP											G
CORO7	ARFGAP1	21836163		pred	P	P	G	G	GP	GP				GP	G	P		GP	GP		GP	GP		P		GP		P		GP	G	P	GP
SEC24B	CORO7	21836163		pred	P	P	G	G	GP	GP			P	GP	G	P		GP	GP		GP	GP		P		GP	P	P	P	GP	GP	P	GP
SEC24D	CORO7	21836163		pred	P	P		G	GP	P			P	GP		P		GP	GP		GP	P		P		G	P	P	P	GP	GP	P	GP
CORO7	GBF1	21836163		pred	P	P	G	G	G	GP			P	GP	G	P		G	GP		GP	GP		P		GP	P	P	P	GP	G		GP
CORO7	HCN2	21836163		pred			G			G					G							G
CORO7	PITPNA	21836163		pred		P	G	G	GP	G				GP	G	P		G	G		G	G		P		GP				G	GP		G
CORO7	VPS29	21836163		pred	P	P	G	G	GP	GP			P	GP	G	P		GP	GP		GP	GP		P		GP	P	P	P	GP	GP	P	GP
COPA	CORO7	21836163		pred	P	P	G	G	GP	GP			P	GP	G	P		GP	GP		GP	GP		P		GP	P	P		GP	GP	P	GP
CORO7	GOLPH3	21836163		pred	P	P	G	G	GP	GP				GP	G	P		G	GP		GP	GP		P		GP	P	P		GP	G	P	GP
HIP1R	CORO7	21836163		pred	P	P	G	G	GP	GP			P	GP	G	P		GP	GP		GP	GP		P		GP	P	P		GP	GP	P	GP
IQGAP1	CORO7	21836163		pred	P	P	G	G	GP	GP			P	GP	G	P		GP	GP		GP	GP		P		GP	P	P		GP	GP	P	GP
CORO7	PIKFYVE	21836163		pred	P	P	G	G	GP	GP			P	GP	G	P		GP	G		GP	GP		P		GP	P	P	P	GP	G	P	GP
COPB1	CORO7	21836163		pred	P	P	G	G	GP	GP			P	GP	G	P		GP	GP		GP	GP		P		GP	P	P	P	GP	GP	P	GP
AMPH	CORO7	21836163		pred			G	G	G	GP				GP	G						G	GP		P						G	G		G
CORO7	PACSIN2	21836163		pred	P	P	G	G	GP	GP				GP	G	P		GP	GP		GP	GP		P		GP	P	P		GP	GP	P	GP
CORO7	MAP4K3	21836163		pred			G		P	GP				GP	G	P		GP	GP		GP	GP		P		GP			P	GP	G	P	GP
CORO7	RFWD2	21836163		pred			G	G	G	GP				GP	G			G	G		G	GP				GP				G	G	P	G
CORO7	CLIP3	21836163		pred	P	P	G		P	GP			P	GP	G	P		G	GP		GP	GP		P		P		P	P	GP	GP	P	GP
CORO7	PIK3C3	21836163		pred	P	P	G	G	GP	GP			P	GP	G	P		GP	GP		P	GP		P		GP	P	P	P	GP	GP	P	GP
CORO7	RABEP1	21836163		pred	P	P	G	G	GP	GP			P	GP	G	P		GP	GP		GP	GP		P		GP	P	P	P	GP	GP	P	GP
CORO7	ARFGEF2	21836163		pred	P	P	G	G	GP	GP			P	GP	G	P		GP	GP		GP	GP		P		GP	P	P	P	GP	GP	P	GP
CORO7	ARFGEF1	21836163		pred	P	P	G	G	GP	GP			P	GP	G	P		GP	GP		GP	GP		P		GP	P	P	P	GP	GP	P	GP
CORO7	ARHGAP24	21836163		pred	P	P	G	G	GP	GP			P	GP	G	P		GP	GP		GP	GP		P		GP	P	P	P	GP	GP	P	GP
VPS26A	CORO7	21836163		pred	P	P	G	G	GP	GP				GP	G	P		GP	GP		GP	GP		P		GP	P	P		GP	GP	P	GP
CORO7	AP2B1	21836163		pred		P	G	G	GP	GP				GP	G	P		GP	GP		GP	GP		P		GP	P	P		GP	GP	P	GP
CORO7	SEC23A	21836163		pred			G	G	G	G				G	G			G	G		G	G				G				G	G		G
CORO7	HPS1	21836163		pred	P	P	G	G	GP	GP			P	GP	G	P		GP	GP		GP	GP		P		GP	P	P	P	GP	G	P	GP
COPE	CORO7	21836163		pred	P	P	G	G	GP	GP				GP	G	P		GP	G		GP	GP		P		GP	P	P		GP	GP	P	GP
AP3B1	CORO7	21836163		pred	P	P	G	G	G	GP			P	GP	G	P		GP	GP		GP	GP		P		GP	P	P	P	GP	G	P	GP
SEC24A	CORO7	21836163		pred		P	G	G	G	G				GP	G	P		GP	GP		GP	G		P		GP	P	P		GP	GP	P	GP
CORO7	ARF3	21836163		pred			G	G	G	G				G	G			G	G		G	G				G				G	G		G

PPI - iRefIndex
UniProt A	UniProt B	Method	PMID	Interaction Type	Edge type	Num Participants
P57737	Q61471	anti tag coimmunoprecipitation	21130766	physical association	X	2
P57737	Q61471	two hybrid	21130766	physical association	X	2
P57737	Q61471	fluorescence microscopy	21130766	colocalization	X	2
P57737	P62877	anti tag coimmunoprecipitation	21130766	physical association	X	2
P57737	Q15370	anti tag coimmunoprecipitation	21130766	physical association	X	2
P57737	A0A024R7Y5	anti tag coimmunoprecipitation	21130766	physical association	X	2
P57737	A0A090N7U0	anti tag coimmunoprecipitation	21130766	physical association	X	2
P57737	A0A024R1Z1	anti tag coimmunoprecipitation	21130766	physical association	X	2

PPI - PINA
Gene A	Gene B	Method	Publications	Species A	Species B	Interaction Type	Source Database	Interaction Identidiers	Experimental Role(s) Interactor A	Experimental Role(s) Interactor B
TOB1	CORO7	MI:0004(affinity chromatography technology)\|MI:0004(affinity chromatography technology)	21130766	taxid:9606(Homo sapiens)	taxid:9606(Homo sapiens)	MI:0407(direct interaction)\|MI:0915(physical association)	(biogrid)\|(biogrid)	BIOGRID_148410\|BIOGRID_148404	prey\|prey	bait\|bait
UBC	CORO7	MI:0004(affinity chromatography technology)\|MI:0004(affinity chromatography technology)\|MI:0004(affinity chromatography technology)\|MI:0004(affinity chromatography technology)\|MI:0004(affinity chromatography technology)	21139048,21890473,21906983,22505724,23000965	taxid:9606(Homo sapiens)	taxid:9606(Homo sapiens)	MI:0915(physical association)\|MI:0915(physical association)\|MI:0915(physical association)\|MI:0915(physical association)\|MI:0915(physical association)	(biogrid)\|(biogrid)\|(biogrid)\|(biogrid)\|(biogrid)	BIOGRID_174466\|BIOGRID_268991\|BIOGRID_179509\|BIOGRID_225149\|BIOGRID_170271	bait\|bait\|bait\|bait\|bait	prey\|prey\|prey\|prey\|prey
CDC34	CORO7	MI:0018(two hybrid)\|MI:0018(two hybrid)\|MI:0004(affinity chromatography technology)	21130766	taxid:9606(Homo sapiens)	taxid:9606(Homo sapiens)	MI:0915(physical association)\|MI:0915(physical association)\|MI:0915(physical association)	(intact)\|(intact)\|(biogrid)	UniProt_173389\|UniProt_111475\|BIOGRID_148407	bait\|bait\|bait	prey\|prey\|prey
CORO7	TCEB1	MI:0018(two hybrid)\|MI:0004(affinity chromatography technology)\|MI:0018(two hybrid)	21130766	taxid:9606(Homo sapiens)	taxid:9606(Homo sapiens)	MI:0915(physical association)\|MI:0915(physical association)\|MI:0915(physical association)	(intact)\|(biogrid)\|(intact)	UniProt_173387\|BIOGRID_148409\|UniProt_111473	prey\|prey\|prey	bait\|bait\|bait
CORO7	TCEB2	MI:0018(two hybrid)\|MI:0004(affinity chromatography technology)\|MI:0018(two hybrid)	21130766	taxid:9606(Homo sapiens)	taxid:9606(Homo sapiens)	MI:0915(physical association)\|MI:0915(physical association)\|MI:0915(physical association)	(intact)\|(biogrid)\|(intact)	UniProt_173386\|BIOGRID_148408\|UniProt_111472	prey\|prey\|prey	bait\|bait\|bait
CORO7	RBX1	MI:0004(affinity chromatography technology)\|MI:0018(two hybrid)\|MI:0018(two hybrid)	21130766	taxid:9606(Homo sapiens)	taxid:9606(Homo sapiens)	MI:0915(physical association)\|MI:0915(physical association)\|MI:0915(physical association)	(biogrid)\|(intact)\|(intact)	BIOGRID_148406\|UniProt_173390\|UniProt_111476	prey\|prey\|prey	bait\|bait\|bait
CORO7	DAG1	MI:0401(biochemical)	22939629	taxid:9606(Homo sapiens)	taxid:9606(Homo sapiens)	MI:0403(colocalization)	(biogrid)	BIOGRID_241962	bait	prey
CORO7	CUL1	MI:0018(two hybrid)\|MI:0018(two hybrid)\|MI:0004(affinity chromatography technology)	21130766	taxid:9606(Homo sapiens)	taxid:9606(Homo sapiens)	MI:0915(physical association)\|MI:0915(physical association)\|MI:0915(physical association)	(intact)\|(intact)\|(biogrid)	UniProt_173388\|UniProt_111474\|BIOGRID_148405	prey\|prey\|prey	bait\|bait\|bait

PPI - Mentha
Protein A	Protein B	Gene A	Gene B	Score	PMID
P57737	O43747	CORO7	AP1G1	0.376	16905771
P57737	P05412	CORO7	JUN	0.21	24768539
P60709	P57737	ACTB	CORO7	0.309	24768539
Q14118	P57737	DAG1	CORO7	0.081	22939629
P57737	P04629	CORO7	NTRK1	0.126	25921289
Q9NVD3	P57737	SETD4	CORO7	0.236	26496610
Q9QUI0	P57737	RHOA	CORO7	0.236	26496610
Q8N4V1	P57737	MMGT1	CORO7	0.236	26496610
Q8N5N7	P57737	MRPL50	CORO7	0.236	26496610
P57737	P12931	CORO7	SRC	0.454	18581049
Q15369	P57737	TCEB1	CORO7	0.376	21130766
P57737	P26447	CORO7	S100A4	0.236	26496610
Q61879	P57737	MYH10	CORO7	0.236	26496610
P57737	P49427	CORO7	CDC34	0.376	21130766
P57737	P54132	CORO7	BLM	0.236	26496610
P62877	P57737	RBX1	CORO7	0.376	21130766
Q61471	P57737	TOB1	CORO7	0.523	21130766
Q9Y2M5	P57737	KLHL20	CORO7	0.671	24768539,26186194
Q96CW1	P57737	AP2M1	CORO7	0.309	16905771
Q9BXS5	P57737	AP1M1	CORO7	0.309	16905771
Q9UGI0	P57737	ZRANB1	CORO7	0.309	24768539
Q13616	P57737	CUL1	CORO7	0.376	21130766
P57737	P49746	CORO7	THBS3	0.126	26186194
P57737	P50616	CORO7	TOB1	0.623	21130766
Q15370	P57737	TCEB2	CORO7	0.376	21130766
P57737	P42566	CORO7	EPS15	0.454	24768539