Disease associated variation - ClinVar | Allele ID | Type | Name | RS#dbSNP | Phenotype IDs | Chromosome | Start | Stop | Reference | Alternate | 159845 | copy number gain | GRCh38/hg38 7p21.1(chr7:16925050-17334072)x3 | -1 | - | 7 | 16964674 | 17373696 | na | na | 159845 | copy number gain | GRCh38/hg38 7p21.1(chr7:16925050-17334072)x3 | -1 | - | 7 | 16925050 | 17334072 | na | na | 159845 | copy number gain | GRCh38/hg38 7p21.1(chr7:16925050-17334072)x3 | -1 | - | 7 | 16931199 | 17340221 | na | na | |
Disease associated variation - GWASdb | Chr | Pos | SNP ID(dbSNP 142) | Ref | Alt | Ori SNP ID | P-value | Drug Name | Drug Anno | GWAS Trait | HPO ID | DO ID | AA | Type | Trait or Drug | 7 | 17357873 | rs1476080 | T | G | rs1476080 | 4.19E-06 | CAFFEINE | CYTOCHROME P-450 CYP1A2|RECEPTORS, ARYL HYDROCARBON | Caffeine consumption | HPOID:0000707 | NA | A | intron | GWASdb_drug | 7 | 17380662 | rs2040623 | A | C | rs2040623 | 3.67E-05 | CAFFEINE | CYTOCHROME P-450 CYP1A2|RECEPTORS, ARYL HYDROCARBON | Caffeine consumption | HPOID:0000707 | NA | T | intron | GWASdb_drug | 7 | 17357873 | rs1476080 | T | G | rs1476080 | 4.19E-06 | | | Caffeine consumption | HPOID:0000707 | NA | A | intron | GWASdb_trait | 7 | 17380662 | rs2040623 | A | C | rs2040623 | 3.67E-05 | | | Caffeine consumption | HPOID:0000707 | NA | T | intron | GWASdb_trait | |
Disease associated variation - OMIM | Ensembl_gene_ID | Approved Gene Symbol | MIM Number | ENSG00000106546.12 | AHR | 600253 | |