iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

SNP - dbSNP
dbSNP	Type	Alleles	Het	Se(het)	Fxn-class	Gene Name	Assembly	Chr-pos	Sequence	Entrez Gene
rs733913	snp	A/G	0.0130921	0.0798413	intron-variant	TNFAIP1	GRCh38.p7	17:28343983	CAACCCCTGAGAGTT[A/G]CTGTCAACATTACGG	7126
rs733914	snp	C/G	0.489837	0.0705577	intron-variant	TNFAIP1	GRCh38.p7	17:28344170	AGACATGAGGACAGG[C/G]AAGACCAACATCCTC	7126
rs739440	snp	C/T	0.00557542	0.0525036	intron-variant	TNFAIP1	GRCh38.p7	17:28342060	ACCAACTGAGTTCCT[C/T]TTCCTCACAGGCCCC	7126
rs1007398	snp	C/T	0.375996	0.215928	intron-variant	TNFAIP1	GRCh38.p7	17:28338622	CAGCCTCCAGAGCAG[C/T]CTGTGCCAGTGTTTA	7126
rs2106343	snp	A/G	0	0	upstream-variant-2KB, intron-variant	IFT20, TNFAIP1	GRCh38.p7	17:28336847	TAGGTAAGTCCCTGG[A/G]AAGAATGTCCAAGGA	7126
rs2234116	snp	C/T	0.0391387	0.134304	intron-variant	TNFAIP1	GRCh38.p7	17:28340200	CGTAAGGGCTTTGTG[C/T]TCGTGGACCCCCTTC	7126
rs2234117	snp	C/T	0.245631	0.249962	intron-variant	TNFAIP1	GRCh38.p7	17:28341534	TCCCAGCACGGTCGG[C/T]GTGGGTCTGGGCCTG	7126
rs2234118	snp	G/T	0.00349397	0.0416506	intron-variant	TNFAIP1	GRCh38.p7	17:28342240	TTGGCCCTCATGTTT[G/T]TTTCAGCAACTCTGA	7126
rs2234119	snp	C/T	0	0	synonymous-codon	TNFAIP1	GRCh38.p7	17:28342421	CTCCATCGTGTATGC[C/T]ACGGAGAAGAAGCAG	7126
rs2234120	snp	A/G	0.00755907	0.0610114	intron-variant	TNFAIP1	GRCh38.p7	17:28344307	GCCAGCCGCTCTGAC[A/G]CATGGCTTCCTCTTG	7126
rs2234121	snp	A/G	4.96759e-05	0.00498352	missense	TNFAIP1	GRCh38.p7	17:28344515	AGACCTTTGAACTGC[A/G]GGACCGTGTCCGCCG	7126
rs2285409	snp	A/C	0.264358	0.249587	intron-variant	TNFAIP1	GRCh38.p7	17:28344174	CTACAGACATGAGGA[A/C]AGGGAAGACCAACAT	7126
rs3093673	snp	C/T	0.00318978	0.0398085	intron-variant, upstream-variant-2KB	IFT20, TNFAIP1	GRCh38.p7	17:28333688	GTAATCCCAGCACTT[C/T]GGGAGACTGAGGTGG	7126
rs3093674	snp	A/C	0.0115144	0.0749975	intron-variant, upstream-variant-2KB	IFT20, TNFAIP1	GRCh38.p7	17:28334149	GTAAAGAAATAATCA[A/C]AAATCGTGATATTAC	7126
rs3093677	snp	C/G	0.00389862	0.0439785	upstream-variant-2KB, intron-variant	IFT20, TNFAIP1	GRCh38.p7	17:28337046	ATGTGATGAGCATTC[C/G]GTGAAATCATTCCAC	7126
rs3093679	snp	A/G	0.238749	0.249747	upstream-variant-2KB, intron-variant	IFT20, TNFAIP1	GRCh38.p7	17:28337189	ATTCTCTACCCAGCA[A/G]CAAGTTATCTTTTCA	7126
rs3093680	snp	C/T	0.3752	0.216391	intron-variant	TNFAIP1	GRCh38.p7	17:28337780	gcttttcctgtccct[C/T]tgtctaaattagtgc	7126
rs3093681	snp	C/T	0.237303	0.249677	intron-variant	TNFAIP1	GRCh38.p7	17:28338956	GGCAGGGAGGCCAGA[C/T]GCGGTGATTCATACT	7126
rs3093682	snp	C/G	0.0138799	0.0821421	intron-variant	TNFAIP1	GRCh38.p7	17:28339365	GTCTCCTCCTGGGCT[C/G]TCTCAGCTGGTTCGT	7126
rs3093683	snp	C/T	0.0130921	0.0798413	intron-variant	TNFAIP1	GRCh38.p7	17:28339821	ACTTTTCCTCTTCAC[C/T]TTATGTAGGGTGTCT	7126
rs3093684	snp	C/T	0.0246875	0.108325	intron-variant	TNFAIP1	GRCh38.p7	17:28341034	GCAGGTGTGAGCTAC[C/T]GCACCCGGCCTGGAT	7126
rs3093685	snp	A/G	0.0134861	0.0810011	intron-variant	TNFAIP1	GRCh38.p7	17:28341041	tgagctaccgcaccc[A/G]gccTGGATCTTGGGT	7126
rs3093686	snp	A/C/T	0.00234984	0.0341969	synonymous-codon	TNFAIP1	GRCh38.p7	17:28342379	CTTTTATGGCCAGGG[A/C/T]CGTAAGCTGGCAGAG	7126
rs3093687	snp	C/T	0.0017399	0.0294435	intron-variant, synonymous-codon	TNFAIP1	GRCh38.p7	17:28342478	CTGGGTAGGGGAGGA[C/T]ACACACCCACTGTGC	7126
rs3093688	snp	C/T	0.00676609	0.0577691	intron-variant	TNFAIP1	GRCh38.p7	17:28342744	GCTGGCTCACACCAC[C/T]TGCCAGTTTTCTGAC	7126
rs3093689	snp	A/C	0.00676609	0.0577691	intron-variant	TNFAIP1	GRCh38.p7	17:28343074	CAAGTACTCAGGAGG[A/C]TGCTGTGGGAAGATC	7126
rs3093690	snp	A/G	0.0130921	0.0798413	intron-variant	TNFAIP1	GRCh38.p7	17:28343162	ACACTTTTAATAATA[A/G]TAAAATAAAATCTCC	7126
rs3093691	snp	C/G	0.0130921	0.0798413	intron-variant	TNFAIP1	GRCh38.p7	17:28343272	TCATCACAAACTCAG[C/G]TGGCCCCTCTCCCCC	7126
rs3093692	snp	A/G	0.489665	0.0711382	intron-variant	TNFAIP1	GRCh38.p7	17:28343601	AAGGGTTCAGGGGCA[A/G]GTCTCCAGTGGCTGG	7126
rs3093693	snp	C/T	0.0130921	0.0798413	intron-variant	TNFAIP1	GRCh38.p7	17:28343607	TCAGGGGCAGGTCTC[C/T]AGTGGCTGGTGATGC	7126
rs3093694	snp	C/G	0.00835141	0.0640778	intron-variant	TNFAIP1	GRCh38.p7	17:28344245	TCCCTGGAGACGGAC[C/G]GCCACCTGTTTTATG	7126
rs3093695	snp	C/T	0.0134861	0.0810011	utr-variant-3-prime	TNFAIP1	GRCh38.p7	17:28344995	GTGCAGAAAGTGGGA[C/T]GTCTTTTTTCCTAAG	7126
rs3093696	snp	C/T	0.00993419	0.0697739	utr-variant-3-prime	TNFAIP1	GRCh38.p7	17:28345239	TGACCCATGTCTTTC[C/T]ACCCTAATCCCCACT	7126
rs3093697	snp	C/G	0.0130921	0.0798413	utr-variant-3-prime	TNFAIP1	GRCh38.p7	17:28345730	ATGCTCTTGGTTGGT[C/G]CTGGCTGGGATGGCG	7126
rs3093698	snp	A/G	0.0182019	0.0936463	utr-variant-3-prime	TNFAIP1	GRCh38.p7	17:28345773	GGTGTCTCTGAGCGC[A/G]GGATGACAGGAGCAA	7126
rs3093699	snp	A/G	0.0115144	0.0749975	utr-variant-3-prime	TNFAIP1	GRCh38.p7	17:28345884	CTCTTTAGGGCTTTG[A/G]TTTTCATTCCTTTTT	7126
rs3093700	snp	C/T	0.00438332	0.0466095	utr-variant-3-prime	TNFAIP1	GRCh38.p7	17:28346023	GTACCCACTTTCTGC[C/T]CTTTGGAGAGAACAC	7126
rs3093701	snp	C/T	0.00993419	0.0697739	utr-variant-3-prime	TNFAIP1	GRCh38.p7	17:28346073	TCTTGACTACTCTTA[C/T]GATAGCTGATGCCAC	7126
rs3093702	snp	C/T	0.000399281	0.0141238	utr-variant-3-prime	TNFAIP1	GRCh38.p7	17:28346076	TGACTACTCTTATGA[C/T]AGCTGATGCCACAGA	7126
rs3093703	snp	A/G	0.0123036	0.0774623	downstream-variant-500B, utr-variant-3-prime	POLDIP2, TNFAIP1	GRCh38.p7	17:28346156	ACATGACGGCGGGAC[A/G]GGGGAAATGTGACTT	7126
rs3093704	snp	A/T	0.262435	0.249691	downstream-variant-500B, utr-variant-3-prime	POLDIP2, TNFAIP1	GRCh38.p7	17:28346290	CATTGAGGTAACAAG[A/T]TAAAGACAAATCCAC	7126
rs3093705	snp	A/G	0.0130921	0.0798413	downstream-variant-500B, utr-variant-3-prime	POLDIP2, TNFAIP1	GRCh38.p7	17:28346338	GGCTTTGGCTTTATG[A/G]CTTTCCCACAGAGAC	7126
rs3093706	snp	C/T	0.00795532	0.062565	downstream-variant-500B, utr-variant-3-prime	POLDIP2, TNFAIP1	GRCh38.p7	17:28346369	TGGAATGCGTCAGCC[C/T]GAGACCACTGGCCTA	7126
rs3093708	snp	A/G	0.067446	0.170804	utr-variant-3-prime, nc-transcript-variant	POLDIP2, TNFAIP1	GRCh38.p7	17:28346865	GTTTTATTGAATTTG[A/G]TATGTGACCAAGGTC	7126
rs3093709	snp	A/G	0.00159617	0.0282053	utr-variant-3-prime, nc-transcript-variant	POLDIP2, TNFAIP1	GRCh38.p7	17:28346867	TTTATTGAATTTGGT[A/G]TGTGACCAAGGTCGG	7126
rs3093710	snp	A/G	0.030665	0.119967	utr-variant-3-prime, downstream-variant-500B, nc-transcript-variant	POLDIP2, TNFAIP1	GRCh38.p7	17:28347068	GCGGCCATGGGCTGA[A/G]TTCCTGTGCTTCTGT	7126
rs3093711	in-del	-/CAGGTCGTAAGC	0.209751	0.246739	cds-indel, downstream-variant-500B, nc-transcript-variant	POLDIP2, TNFAIP1	GRCh38.p7	17:28347109	ACCTTGTGTTCTAGC[-/CAGGTCGTAAGC]GCGACTGTACTGTTG	7126
rs3093718	snp	A/G	0.0283406	0.115616	intron-variant, upstream-variant-2KB	IFT20, TNFAIP1	GRCh38.p7	17:28334133	TGCCTCTGGACAGAT[A/G]GTAAAGAAATAATCA	7126
rs3093719	snp	C/T	0.0186899	0.0948454	upstream-variant-2KB, intron-variant	IFT20, TNFAIP1	GRCh38.p7	17:28337434	TGTTGAGATGAGATT[C/T]CCCTATGTCACCCAG	7126
rs3093720	snp	A/C	0.0726307	0.176182	intron-variant	TNFAIP1	GRCh38.p7	17:28338742	TGGGATCCTGGGAAC[A/C]TTGACAAGAAAGTAA	7126
rs3093722	snp	A/C/T	0.0136694	0.0815355	missense, synonymous-codon	TNFAIP1	GRCh38.p7	17:28342346	GGATGTCATTGGTGA[A/C/T]GAGATCTGCTGCTGG	7126
rs3093723	in-del	-/A	0.00636936	0.0560724	utr-variant-3-prime, downstream-variant-500B, nc-transcript-variant	POLDIP2, TNFAIP1	GRCh38.p7	17:28347374	TGCTCCTCAGCCAAA[-/A]TTCCTGCATTTGTGG	7126
rs5819838	in-del	-/G	1.9008e-05	0.0030828	intron-variant	TNFAIP1	GRCh38.p7	17:28342219	GGAACCTCACTCCCA[-/G]GCCGCTTGGCCCTCA	7126
rs5819840	in-del	-/G	0.000399281	0.0141238	utr-variant-3-prime	TNFAIP1	GRCh38.p7	17:28344919	AGGCCCTGTGCAGAA[-/G]GGCTACTGCCCCTTA	7126
rs8080258	snp	A/C	0.0150606	0.0854603	intron-variant	TNFAIP1	GRCh38.p7	17:28340886	AGTAGCTGGGAATGC[A/C]AGCATGCGCCATGGC	7126
rs8080867	snp	A/G	0	0	intron-variant	TNFAIP1	GRCh38.p7	17:28340887	GTAGCTGGGAATGCC[A/G]GCATGCGCCATGGCA	7126
rs9911041	snp	A/C	0.00865784	0.0652224	upstream-variant-2KB, intron-variant	IFT20, TNFAIP1	GRCh38.p7	17:28336179	GTGTCTGACGGATTT[A/C]TGGGTCCTTCTTCCT	7126
rs11394711	in-del	-/C	0	0	utr-variant-3-prime	TNFAIP1	GRCh38.p7	17:28345334	GCAGCTCTGGCTTTG[-/C]CAGCCTGGCCAGCAG	7126
rs11550487	snp	G/T			utr-variant-3-prime	TNFAIP1	GRCh38.p7	17:28344932	AAGGGCTACTGCCCC[G/T]TAGGCCTCAGCTGGG	7126
rs11550488	snp	A/C	0	0	missense	TNFAIP1	GRCh38.p7	17:28340437	GAAGCAAAGTATTAC[A/C]TCATCCAGGGGCTGG	7126
rs11550489	snp	A/G			utr-variant-3-prime	TNFAIP1	GRCh38.p7	17:28344998	CACCTTAGGAAAAAA[A/G]ACGTCCCACTTTCTG	7126
rs34565131	in-del	-/A			intron-variant	TNFAIP1	GRCh38.p7	17:28341587	GTTGGGGAAAAACAG[-/A]AAAGTAGAAGGGAAA	7126
rs34612602	in-del	-/T			intron-variant	TNFAIP1	GRCh38.p7	17:28338160	TAAATGCCAAGAGAT[-/T]GGGGTCTTGCTATGT	7126
rs34805570	in-del	-/T			intron-variant, upstream-variant-2KB	IFT20, TNFAIP1	GRCh38.p7	17:28334151	AAGAAATAATCACAA[-/T]ATCGTGATATTACTA	7126
rs34818828	in-del	-/G			intron-variant, upstream-variant-2KB	IFT20, TNFAIP1	GRCh38.p7	17:28334462	AGCTGGATCACCGAA[-/G]GCTCTGAAAGACGCA	7126
rs34877525	in-del	-/G			upstream-variant-2KB, intron-variant	IFT20, TNFAIP1	GRCh38.p7	17:28337458	ACCCAGGCTGACTTT[-/G]CCCAGGCTCAAGCAG	7126
rs35011021	in-del	-/C			utr-variant-3-prime, downstream-variant-500B, nc-transcript-variant	POLDIP2, TNFAIP1	GRCh38.p7	17:28347063	GCTTGCGGCCATGGG[-/C]CTGAGTTCCTGTGCT	7126
rs35390601	in-del	-/T			intron-variant	TNFAIP1	GRCh38.p7	17:28338160	TTAAATGCCAAGAGA[-/T]GGGGTCTTGCTATGT	7126
rs35418585	in-del	-/T			intron-variant	TNFAIP1	GRCh38.p7	17:28343527	TGCTTCCTTCTGCGG[-/T]TTTTGGTGTAGGGGT	7126
rs35455362	in-del	-/C			intron-variant	TNFAIP1	GRCh38.p7	17:28340784	GTTTCACTCCTGTCA[-/C]CCCAGGCTGGAGTGC	7126
rs36002156	in-del	-/C			intron-variant	TNFAIP1	GRCh38.p7	17:28344169	GAGGATGTTGGTCTT[-/C]CCCTGTCCTCATGTC	7126
rs57433642	snp	A/T			intron-variant	TNFAIP1	GRCh38.p7	17:28343012	AAACCCCGTCTTTAC[A/T]AAAAATAGAAAAATT	7126
rs59057792	in-del	-/GT			utr-variant-3-prime, downstream-variant-500B, nc-transcript-variant	POLDIP2, TNFAIP1	GRCh38.p7	17:28347127	GTCGTAAGCGCGACT[-/GT]ACTGTTGCCCTGCAA	7126
rs59888779	snp	C/T	0.00199481	0.0315187	intron-variant	TNFAIP1	GRCh38.p7	17:28343003	AACATGGTGAAACCC[C/T]GTCTTTACAAAAAAT	7126
rs60150286	snp	A/G			utr-variant-3-prime, nc-transcript-variant	POLDIP2, TNFAIP1	GRCh38.p7	17:28346808	CTTGTCAGTTTCTGA[A/G]AAACCTGGCAGCCTG	7126
rs60828712	snp	C/G			intron-variant	TNFAIP1	GRCh38.p7	17:28343020	TCTTTACAAAAAATA[C/G]AAAAATTAGCCAGGC	7126
rs62065276	snp	A/G	0.000798403	0.0199641	intron-variant	TNFAIP1	GRCh38.p7	17:28344270	TTTATGAGAGGTAGC[A/G]GAGGCCTTATGGAGC	7126
rs66918151	multinucleotide-polymorphism	AG/CA	0	0	intron-variant	TNFAIP1	GRCh38.p7	17:28340887	AGTAGCTGGGAATGC[AG/CA]GCATGCGCCATGGCA	7126
rs71372372	snp	G/T	0.5	0	utr-variant-3-prime, downstream-variant-500B, nc-transcript-variant	POLDIP2, TNFAIP1	GRCh38.p7	17:28347100	TATCATCTGACCTTG[G/T]GTTCTAGCCAGGTCG	7126
rs73271168	snp	A/G	0.0283406	0.115616	upstream-variant-2KB, utr-variant-5-prime	IFT20, TNFAIP1	GRCh38.p7	17:28335547	GGGAAACAGAGGCCC[A/G]AGGGGAGGCCCGGCC	7126
rs75013321	snp	A/G	0.00636936	0.0560724	intron-variant	TNFAIP1	GRCh38.p7	17:28341123	TCATGATCTGTATCT[A/G]ACACTTCCTCACCAA	7126
rs75080325	snp	C/G			utr-variant-3-prime	TNFAIP1	GRCh38.p7	17:28344922	GCCCTGTGCAGAAGG[C/G]TACTGCCCCTTAGGC	7126
rs75193644	snp	A/G	0.00755907	0.0610114	utr-variant-3-prime, downstream-variant-500B, nc-transcript-variant	POLDIP2, TNFAIP1	GRCh38.p7	17:28347485	TCTCCTGGGCCTAGC[A/G]AGGCCAGAAATGGCA	7126
rs75686763	snp	A/G	0.00557542	0.0525036	upstream-variant-2KB, intron-variant	IFT20, TNFAIP1	GRCh38.p7	17:28337417	TGTTTTAATTTTGTC[A/G]TTGTTGAGATGAGAT	7126
rs75945208	snp	C/T	0.00279162	0.0372561	utr-variant-3-prime	TNFAIP1	GRCh38.p7	17:28345603	CGTGGAGCCCGTGGG[C/T]ACTGCATGGTGTTGG	7126
rs75976962	snp	C/T	0.00557542	0.0525036	upstream-variant-2KB, intron-variant	IFT20, TNFAIP1	GRCh38.p7	17:28336234	CCGCGGCTGTTTGCC[C/T]TTTGTTGTGCTTGGG	7126
rs76662257	snp	G/T	0.00438332	0.0466095	intron-variant	TNFAIP1	GRCh38.p7	17:28342753	CACCACTTGCCAGTT[G/T]TCTGACTTTGGATAA	7126
rs77194390	snp	A/T	0.5	0	intron-variant	TNFAIP1	GRCh38.p7	17:28337534	CCACCATATCTGGCT[A/T]ATTTTTTTTTATTTG	7126
rs77434228	snp	C/T	0.00119737	0.0244387	synonymous-codon	TNFAIP1	GRCh38.p7	17:28342310	CTCCCTGCGCTTCAA[C/T]GGCCGCGTGCTCTTC	7126
rs77466853	snp	C/T	0.0103295	0.0711199	upstream-variant-2KB, intron-variant	IFT20, TNFAIP1	GRCh38.p7	17:28336206	TCCTTTTAGACCCCT[C/T]CTCTTTCCACCTCCG	7126
rs77619571	snp	A/T	0.5	0	intron-variant	TNFAIP1	GRCh38.p7	17:28337536	ACCATATCTGGCTAA[A/T]TTTTTTTTATTTGTA	7126
rs78145175	snp	A/G	0.000399281	0.0141238	intron-variant	TNFAIP1	GRCh38.p7	17:28339047	ACCAGCCTGGGCAGC[A/G]TGGTAAAACCCTGTC	7126
rs78433288	snp	A/G			utr-variant-3-prime	TNFAIP1	GRCh38.p7	17:28346014	CCACGTATAGTACCC[A/G]CTTTCTGCTCTTTGG	7126
rs78853973	in-del	-/T			utr-variant-3-prime, downstream-variant-500B, nc-transcript-variant	POLDIP2, TNFAIP1	GRCh38.p7	17:28347377	CTGCTCCTCAGCCAA[-/T]ATTCCTGCATTTGTG	7126
rs80173960	snp	C/T	0.00279162	0.0372561	downstream-variant-500B, utr-variant-3-prime	POLDIP2, TNFAIP1	GRCh38.p7	17:28346277	TTCTTCCAGCCCTCA[C/T]TGAGGTAACAAGATA	7126
rs111922331	snp	A/G	0.5	0	upstream-variant-2KB, intron-variant	IFT20, TNFAIP1	GRCh38.p7	17:28336405	GTCACCTGCCACAGA[A/G]TTCCTGGAACCCATT	7126
rs112611278	snp	C/T	0.5	0	intron-variant	TNFAIP1	GRCh38.p7	17:28344199	CTGTAGAGTACATCC[C/T]CTCACCCCGCCTTCG	7126
rs112815924	snp	A/G	0.5	0	missense	TNFAIP1	GRCh38.p7	17:28342288	ACATCGAGCTGTTTG[A/G]CAAGCTCTCCCTGCG	7126
rs112851427	snp	A/G	0.000798403	0.0199641	intron-variant	TNFAIP1	GRCh38.p7	17:28341144	TCCTCACCAAGCAGC[A/G]GGTGGCCATGGCAGA	7126
rs112915035	snp	A/G	0.00755907	0.0610114	intron-variant, upstream-variant-2KB	IFT20, TNFAIP1	GRCh38.p7	17:28333873	GAGGTGGAGGCTGCA[A/G]TGAGCCGTGTTCACA	7126

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