Mutation - TCGA |
Type | Chromosome | Start Position | End Position | Strand | Variant Classification | Variant Type | Reference Allele | Tumor_seq Allele 1 | Tumor_seq Allele 2 | Tumor Sample Barcode | Matched Norm Sample Barcode | Genome Change | cDNA Change | Codon Change | Protein Change |
BLCA | 4 | 53476749 | 53476749 | + | Missense_Mutation | SNP | G | G | A | TCGA-ZF-AA51-01A-21D-A391-08 | TCGA-ZF-AA51-10A-01D-A394-08 | g.chr4:53476749G>A | c.596C>T | c.(595-597)tCt>tTt | p.S199F |
BLCA | 4 | 53476771 | 53476771 | + | Missense_Mutation | SNP | C | C | G | TCGA-MV-A51V-01A-11D-A26M-08 | TCGA-MV-A51V-10A-01D-A26K-08 | g.chr4:53476771C>G | c.574G>C | c.(574-576)Gat>Cat | p.D192H |
BRCA | 4 | 53468079 | 53468079 | + | Silent | SNP | A | A | G | TCGA-A2-A04R-01A-41D-A117-09 | TCGA-A2-A04R-10B-01D-A10G-09 | g.chr4:53468079A>G | c.864T>C | c.(862-864)gaT>gaC | p.D288D |
BRCA | 4 | 53468094 | 53468094 | + | Silent | SNP | G | G | A | TCGA-A2-A3XZ-01A-42D-A23C-09 | TCGA-A2-A3XZ-10A-01D-A23C-09 | g.chr4:53468094G>A | c.849C>T | c.(847-849)ttC>ttT | p.F283F |
BRCA | 4 | 53492238 | 53492238 | + | Missense_Mutation | SNP | C | C | T | TCGA-BH-A1EV-01A-11D-A135-09 | TCGA-BH-A1EV-11A-24D-A135-09 | g.chr4:53492238C>T | c.508G>A | c.(508-510)Gag>Aag | p.E170K |
CESC | 4 | 53492271 | 53492271 | + | Missense_Mutation | SNP | C | C | G | TCGA-LP-A4AV-01A-11D-A243-09 | TCGA-LP-A4AV-10A-01D-A243-09 | g.chr4:53492271C>G | c.475G>C | c.(475-477)Gaa>Caa | p.E159Q |
COAD | 4 | 53464836 | 53464836 | + | Missense_Mutation | SNP | T | T | G | TCGA-CA-6717-01A-11D-1835-10 | TCGA-CA-6717-10A-01D-1835-10 | g.chr4:53464836T>G | c.957A>C | c.(955-957)aaA>aaC | p.K319N |
COAD | 4 | 53492294 | 53492294 | + | Frame_Shift_Del | DEL | T | T | - | TCGA-A6-6653-01A-11D-1771-10 | TCGA-A6-6653-10A-01D-1771-10 | g.chr4:53492294delT | c.452delA | c.(451-453)aatfs | p.N151fs |
COAD | 4 | 53494148 | 53494148 | + | Missense_Mutation | SNP | C | C | A | TCGA-CA-6717-01A-11D-1835-10 | TCGA-CA-6717-10A-01D-1835-10 | g.chr4:53494148C>A | c.300G>T | c.(298-300)aaG>aaT | p.K100N |
COAD | 4 | 53494169 | 53494171 | + | In_Frame_Del | DEL | CTT | CTT | - | TCGA-AU-3779-01A-01D-1719-10 | TCGA-AU-3779-10A-01D-1719-10 | g.chr4:53494169_53494171delCTT | c.277_279delAAG | c.(277-279)aagdel | p.K93del |
COAD | 4 | 53494204 | 53494204 | + | Missense_Mutation | SNP | C | C | T | TCGA-AA-3811-01A-01W-0995-10 | TCGA-AA-3811-10A-01W-0995-10 | g.chr4:53494204C>T | c.244G>A | c.(244-246)Gac>Aac | p.D82N |
COAD | 4 | 53494246 | 53494246 | + | Missense_Mutation | SNP | C | C | T | TCGA-AZ-6601-01A-11D-1771-10 | TCGA-AZ-6601-11A-01D-1771-10 | g.chr4:53494246C>T | c.202G>A | c.(202-204)Gcc>Acc | p.A68T |
COAD | 4 | 53497229 | 53497229 | + | Splice_Site | SNP | A | A | G | TCGA-CM-4743-01A-01D-1719-10 | TCGA-CM-4743-10A-01D-1719-10 | g.chr4:53497229A>G | | c.e2+1 | |
COAD | 4 | 53525314 | 53525314 | + | Missense_Mutation | SNP | T | T | G | TCGA-AA-3510-01A-01D-1408-10 | TCGA-AA-3510-11A-01D-1408-10 | g.chr4:53525314T>G | c.4A>C | c.(4-6)Act>Cct | p.T2P |
COADREAD | 4 | 53464836 | 53464836 | + | Missense_Mutation | SNP | T | T | G | TCGA-CA-6717-01A-11D-1835-10 | TCGA-CA-6717-10A-01D-1835-10 | g.chr4:53464836T>G | c.957A>C | c.(955-957)aaA>aaC | p.K319N |
COADREAD | 4 | 53464862 | 53464862 | + | Missense_Mutation | SNP | G | G | A | TCGA-AG-3892-01A-01W-1073-09 | TCGA-AG-3892-10A-01W-1073-09 | g.chr4:53464862G>A | c.931C>T | c.(931-933)Cgt>Tgt | p.R311C |
COADREAD | 4 | 53468064 | 53468064 | + | Silent | SNP | G | G | A | TCGA-EI-6507-01A-11D-1733-10 | TCGA-EI-6507-10A-01D-1733-10 | g.chr4:53468064G>A | c.879C>T | c.(877-879)gaC>gaT | p.D293D |
COADREAD | 4 | 53492294 | 53492294 | + | Frame_Shift_Del | DEL | T | T | - | TCGA-A6-6653-01A-11D-1771-10 | TCGA-A6-6653-10A-01D-1771-10 | g.chr4:53492294delT | c.452delA | c.(451-453)aatfs | p.N151fs |
COADREAD | 4 | 53494148 | 53494148 | + | Missense_Mutation | SNP | C | C | A | TCGA-CA-6717-01A-11D-1835-10 | TCGA-CA-6717-10A-01D-1835-10 | g.chr4:53494148C>A | c.300G>T | c.(298-300)aaG>aaT | p.K100N |
COADREAD | 4 | 53494169 | 53494171 | + | In_Frame_Del | DEL | CTT | CTT | - | TCGA-AU-3779-01A-01D-1719-10 | TCGA-AU-3779-10A-01D-1719-10 | g.chr4:53494169_53494171delCTT | c.277_279delAAG | c.(277-279)aagdel | p.K93del |
COADREAD | 4 | 53494204 | 53494204 | + | Missense_Mutation | SNP | C | C | T | TCGA-AA-3811-01A-01W-0995-10 | TCGA-AA-3811-10A-01W-0995-10 | g.chr4:53494204C>T | c.244G>A | c.(244-246)Gac>Aac | p.D82N |
COADREAD | 4 | 53494246 | 53494246 | + | Missense_Mutation | SNP | C | C | T | TCGA-AZ-6601-01A-11D-1771-10 | TCGA-AZ-6601-11A-01D-1771-10 | g.chr4:53494246C>T | c.202G>A | c.(202-204)Gcc>Acc | p.A68T |
COADREAD | 4 | 53497229 | 53497229 | + | Splice_Site | SNP | A | A | G | TCGA-CM-4743-01A-01D-1719-10 | TCGA-CM-4743-10A-01D-1719-10 | g.chr4:53497229A>G | | c.e2+1 | |
COADREAD | 4 | 53525314 | 53525314 | + | Missense_Mutation | SNP | T | T | G | TCGA-AA-3510-01A-01D-1408-10 | TCGA-AA-3510-11A-01D-1408-10 | g.chr4:53525314T>G | c.4A>C | c.(4-6)Act>Cct | p.T2P |
DLBC | 4 | 53494283 | 53494283 | + | Silent | SNP | G | G | A | TCGA-G8-6324-01A-11D-2210-10 | TCGA-G8-6324-10A-01D-2210-10 | g.chr4:53494283G>A | c.165C>T | c.(163-165)ttC>ttT | p.F55F |
ESCA | 4 | 53470744 | 53470744 | + | Silent | SNP | G | G | A | TCGA-IC-A6RE-01A-11D-A33E-09 | TCGA-IC-A6RE-10A-01D-A33H-09 | g.chr4:53470744G>A | c.645C>T | c.(643-645)ttC>ttT | p.F215F |
ESCA | 4 | 53476753 | 53476753 | + | Missense_Mutation | SNP | G | G | T | TCGA-LN-A4A1-01A-21D-A27G-09 | TCGA-LN-A4A1-10A-01D-A27G-09 | g.chr4:53476753G>T | c.592C>A | c.(592-594)Ctt>Att | p.L198I |
ESCA | 4 | 53494205 | 53494205 | + | Silent | SNP | C | C | T | TCGA-VR-A8ER-01A-11D-A36J-09 | TCGA-VR-A8ER-10A-01D-A36M-09 | g.chr4:53494205C>T | c.243G>A | c.(241-243)gcG>gcA | p.A81A |
GBM | 4 | 53468067 | 53468067 | + | Silent | SNP | C | C | G | TCGA-27-1835-01A-01D-1494-08 | TCGA-27-1835-10A-01D-1494-08 | g.chr4:53468067C>G | c.876G>C | c.(874-876)ctG>ctC | p.L292L |
GBMLGG | 4 | 53468067 | 53468067 | + | Silent | SNP | C | C | G | TCGA-27-1835-01A-01D-1494-08 | TCGA-27-1835-10A-01D-1494-08 | g.chr4:53468067C>G | c.876G>C | c.(874-876)ctG>ctC | p.L292L |
HNSC | 4 | 53464859 | 53464859 | + | Missense_Mutation | SNP | C | C | G | TCGA-CN-A642-01A-12D-A30E-08 | TCGA-CN-A642-10A-01D-A30H-08 | g.chr4:53464859C>G | c.934G>C | c.(934-936)Ggg>Cgg | p.G312R |
HNSC | 4 | 53470719 | 53470719 | + | Missense_Mutation | SNP | C | C | T | TCGA-CV-5435-01A-01D-1683-08 | TCGA-CV-5435-10A-01D-1870-08 | g.chr4:53470719C>T | c.670G>A | c.(670-672)Gaa>Aaa | p.E224K |
HNSC | 4 | 53492412 | 53492412 | + | Missense_Mutation | SNP | G | G | C | TCGA-CR-7399-01A-11D-2012-08 | TCGA-CR-7399-10A-01D-2013-08 | g.chr4:53492412G>C | c.334C>G | c.(334-336)Ctc>Gtc | p.L112V |
HNSC | 4 | 53494256 | 53494256 | + | Missense_Mutation | SNP | C | C | A | TCGA-CR-7364-01A-11D-2012-08 | TCGA-CR-7364-10A-01D-2013-08 | g.chr4:53494256C>A | c.192G>T | c.(190-192)ttG>ttT | p.L64F |
KIPAN | 4 | 53492228 | 53492228 | + | Missense_Mutation | SNP | T | T | C | TCGA-B1-A657-01A-11D-A31X-10 | TCGA-B1-A657-10A-01D-A31X-10 | g.chr4:53492228T>C | c.518A>G | c.(517-519)cAg>cGg | p.Q173R |
KIRP | 4 | 53492228 | 53492228 | + | Missense_Mutation | SNP | T | T | C | TCGA-B1-A657-01A-11D-A31X-10 | TCGA-B1-A657-10A-01D-A31X-10 | g.chr4:53492228T>C | c.518A>G | c.(517-519)cAg>cGg | p.Q173R |
LUAD | 4 | 53468093 | 53468093 | + | Missense_Mutation | SNP | T | T | C | TCGA-64-1679-01A-21D-2063-08 | TCGA-64-1679-10A-01D-2063-08 | g.chr4:53468093T>C | c.850A>G | c.(850-852)Aac>Gac | p.N284D |
LUAD | 4 | 53468111 | 53468111 | + | Missense_Mutation | SNP | G | G | C | TCGA-86-8585-01A-11D-2393-08 | TCGA-86-8585-10A-01D-2393-08 | g.chr4:53468111G>C | c.832C>G | c.(832-834)Ctg>Gtg | p.L278V |
LUAD | 4 | 53468216 | 53468216 | + | Missense_Mutation | SNP | T | T | A | TCGA-05-4430-01A-02D-1265-08 | TCGA-05-4430-10A-01D-1265-08 | g.chr4:53468216T>A | c.727A>T | c.(727-729)Agg>Tgg | p.R243W |
LUAD | 4 | 53492214 | 53492214 | + | Missense_Mutation | SNP | T | T | G | TCGA-69-8255-01A-11D-2284-08 | TCGA-69-8255-10A-01D-2284-08 | g.chr4:53492214T>G | c.532A>C | c.(532-534)Aat>Cat | p.N178H |
LUAD | 4 | 53492221 | 53492221 | + | Silent | SNP | C | C | A | TCGA-NJ-A4YQ-01A-11D-A25L-08 | TCGA-NJ-A4YQ-10A-01D-A25L-08 | g.chr4:53492221C>A | c.525G>T | c.(523-525)acG>acT | p.T175T |
LUAD | 4 | 53494232 | 53494232 | + | Missense_Mutation | SNP | C | C | A | TCGA-05-4410-01A-21D-1855-08 | TCGA-05-4410-10A-01D-1855-08 | g.chr4:53494232C>A | c.216G>T | c.(214-216)aaG>aaT | p.K72N |
LUSC | 4 | 53476783 | 53476783 | + | Splice_Site | SNP | C | C | G | TCGA-18-3409-01A-01D-0983-08 | TCGA-18-3409-11A-01D-0983-08 | g.chr4:53476783C>G | c.562G>C | c.(562-564)Gtt>Ctt | p.V188L |
LUSC | 4 | 53492340 | 53492340 | + | Missense_Mutation | SNP | G | G | A | TCGA-18-5592-01A-01D-1632-08 | TCGA-18-5592-11A-11D-1632-08 | g.chr4:53492340G>A | c.406C>T | c.(406-408)Ctt>Ttt | p.L136F |
LUSC | 4 | 53497298 | 53497298 | + | Missense_Mutation | SNP | G | G | C | TCGA-60-2698-01A-01D-1522-08 | TCGA-60-2698-11A-01D-1522-08 | g.chr4:53497298G>C | c.50C>G | c.(49-51)tCt>tGt | p.S17C |
OV | 4 | 53476722 | 53476722 | + | Missense_Mutation | SNP | A | A | G | TCGA-24-1423-01A-01W-0545-08 | TCGA-24-1423-10A-01W-0545-08 | g.chr4:53476722A>G | c.623T>C | c.(622-624)aTt>aCt | p.I208T |
OV | 4 | 53492362 | 53492362 | + | Frame_Shift_Del | DEL | C | C | - | TCGA-13-0762-01A-01W-0370-10 | TCGA-13-0762-10A-01W-0370-10 | g.chr4:53492362delC | c.384delG | c.(382-384)ttgfs | p.L129fs |
PAAD | 4 | 53468125 | 53468125 | + | Missense_Mutation | SNP | C | C | T | TCGA-IB-7651-01A-11D-2154-08 | TCGA-IB-7651-10A-01D-2154-08 | g.chr4:53468125C>T | c.818G>A | c.(817-819)cGt>cAt | p.R273H |
PRAD | 4 | 53468062 | 53468062 | + | Missense_Mutation | SNP | C | C | A | TCGA-CH-5745-01A-11D-1576-08 | TCGA-CH-5745-10A-01D-1576-08 | g.chr4:53468062C>A | c.881G>T | c.(880-882)cGc>cTc | p.R294L |
PRAD | 4 | 53494320 | 53494320 | + | Missense_Mutation | SNP | G | G | C | TCGA-V1-A9Z9-01A-21D-A41K-08 | TCGA-V1-A9Z9-10A-01D-A41N-08 | g.chr4:53494320G>C | c.128C>G | c.(127-129)aCa>aGa | p.T43R |
READ | 4 | 53464862 | 53464862 | + | Missense_Mutation | SNP | G | G | A | TCGA-AG-3892-01A-01W-1073-09 | TCGA-AG-3892-10A-01W-1073-09 | g.chr4:53464862G>A | c.931C>T | c.(931-933)Cgt>Tgt | p.R311C |
READ | 4 | 53468064 | 53468064 | + | Silent | SNP | G | G | A | TCGA-EI-6507-01A-11D-1733-10 | TCGA-EI-6507-10A-01D-1733-10 | g.chr4:53468064G>A | c.879C>T | c.(877-879)gaC>gaT | p.D293D |
SARC | 4 | 53492298 | 53492298 | + | Missense_Mutation | SNP | T | T | C | TCGA-SI-AA8C-01A-11D-A387-09 | TCGA-SI-AA8C-10A-01D-A38A-09 | g.chr4:53492298T>C | c.448A>G | c.(448-450)Aaa>Gaa | p.K150E |
SKCM | 4 | 53468187 | 53468187 | + | Silent | SNP | G | G | A | TCGA-EE-A2GI-06A-11D-A196-08 | TCGA-EE-A2GI-10A-01D-A198-08 | g.chr4:53468187G>A | c.756C>T | c.(754-756)gcC>gcT | p.A252A |
SKCM | 4 | 53476724 | 53476724 | + | Silent | SNP | G | G | A | TCGA-FW-A3R5-06A-11D-A23B-08 | TCGA-FW-A3R5-10A-01D-A23B-08 | g.chr4:53476724G>A | c.621C>T | c.(619-621)tcC>tcT | p.S207S |
SKCM | 4 | 53494232 | 53494232 | + | Silent | SNP | C | C | T | TCGA-EE-A2M5-06A-12D-A197-08 | TCGA-EE-A2M5-10A-01D-A199-08 | g.chr4:53494232C>T | c.216G>A | c.(214-216)aaG>aaA | p.K72K |
SKCM | 4 | 53494304 | 53494304 | + | Silent | SNP | G | G | A | TCGA-EE-A29S-06A-11D-A197-08 | TCGA-EE-A29S-10A-01D-A199-08 | g.chr4:53494304G>A | c.144C>T | c.(142-144)tcC>tcT | p.S48S |