SNP - dbSNP |
dbSNP | Type | Alleles | Het | Se(het) | Fxn-class | Gene Name | Assembly | Chr-pos | Sequence | Entrez Gene |
rs748094 | snp | A/C | 0.113334 | 0.209338 | intron-variant | TRIM2 | GRCh38.p7 | 4:153278392 | GCACAGTGGCGCATA[A/C]CTGTAATTTCAGCAC | 23321 |
rs893803 | snp | A/G | 0.312593 | 0.242037 | intron-variant | TRIM2 | GRCh38.p7 | 4:153303137 | ACTCTACTGATTTGT[A/G]GTCAAAGGTATGGAT | 23321 |
rs893804 | snp | C/T | 0.312593 | 0.242037 | intron-variant | TRIM2 | GRCh38.p7 | 4:153303128 | ATTTGTAGTCAAAGG[C/T]ATGGATGTTGAAAAG | 23321 |
rs893805 | snp | A/G | 0.498442 | 0.0278666 | synonymous-codon | TRIM2 | GRCh38.p7 | 4:153295558 | CCACAACCTCGGGAC[A/G]ATCTTAACCACCAAC | 23321 |
rs930427 | snp | A/C/G/T | 0.0119243 | 0.0764374 | intron-variant | TRIM2 | GRCh38.p7 | 4:153302248 | ATGTAAAGTTAAAGA[A/C/G/T]GAATGCAAGAAAAAG | 23321 |
rs961358 | snp | A/G | 0.0704125 | 0.17392 | intron-variant | TRIM2 | GRCh38.p7 | 4:153319324 | ATCCAAACAAATGGA[A/G]ACACCTCTGGCCACC | 23321 |
rs1004087 | snp | A/G | | | intron-variant | TRIM2 | GRCh38.p7 | 4:153281715 | AATTAGAAGACAGAT[A/G]GTGTCACAGCACTTA | 23321 |
rs1020155 | snp | G/T | | | intron-variant | TRIM2 | GRCh38.p7 | 4:153262026 | ATCATGAATTGCTTT[G/T]CCCACAACAGCTCTG | 23321 |
rs1025791 | snp | C/T | 0.0792508 | 0.182605 | intron-variant | TRIM2 | GRCh38.p7 | 4:153261138 | CAATAAAAAATGGGC[C/T]Gggccaggcacaatg | 23321 |
rs1062835 | snp | C/G | 0.356169 | 0.226336 | utr-variant-3-prime | TRIM2 | GRCh38.p7 | 4:153337493 | ATGCTATGAGCACTC[C/G]AGGAAACACTATATT | 23321 |
rs1138108 | snp | A/G | | | intron-variant | TRIM2 | GRCh38.p7 | 4:153278705 | ttcggaggctgaggt[A/G]ggaggatcctgtggg | 23321 |
rs1138109 | snp | A/G | | | intron-variant | TRIM2 | GRCh38.p7 | 4:153278693 | tagtcccagctgttc[A/G]gaggctgaggtggga | 23321 |
rs1138111 | snp | C/T | 0.452227 | 0.146984 | intron-variant | TRIM2 | GRCh38.p7 | 4:153278674 | CATGATGGGGCTGCA[C/T]CTGTAGTCCCAGCTG | 23321 |
rs1138112 | snp | A/G | | | intron-variant | TRIM2 | GRCh38.p7 | 4:153278634 | cgaaatcccacctct[A/G]ccaaaaatacaaaaa | 23321 |
rs1142082 | snp | A/G | | | intron-variant | TRIM2 | GRCh38.p7 | 4:153278571 | tgggaggctgaggca[A/G]gccaatcgcttgagc | 23321 |
rs1371654 | snp | A/G | 0.0596104 | 0.162024 | intron-variant | TRIM2 | GRCh38.p7 | 4:153318510 | TTAGAGCTACAGAAA[A/G]GCAGGAGATTTTTAT | 23321 |
rs1455840 | snp | A/G | 0.493107 | 0.0583 | intron-variant | TRIM2 | GRCh38.p7 | 4:153279168 | AGATGGAACTAGAAT[A/G]GCATCAATGGGCCTG | 23321 |
rs1455841 | snp | A/G | 0.113334 | 0.209338 | intron-variant | TRIM2 | GRCh38.p7 | 4:153279195 | CCTGGGGAAGACAGC[A/G]TGAATTTCAGAGAAA | 23321 |
rs1455842 | snp | C/G | 0.451856 | 0.147493 | intron-variant | TRIM2 | GRCh38.p7 | 4:153279230 | TACTCTTTGACTCAA[C/G]AATCTGCCTCCCACA | 23321 |
rs1470104 | snp | A/G | 0.375949 | 0.215955 | intron-variant | TRIM2 | GRCh38.p7 | 4:153270558 | AAGGGAGTTTCGCAG[A/G]CTGACCTCCTACAAC | 23321 |
rs1550427 | snp | A/T | 0.492727 | 0.0598633 | intron-variant, upstream-variant-2KB | TRIM2 | GRCh38.p7 | 4:153280337 | ATTAGTAGCTTAATT[A/T]ATGACATTGGCTGTA | 23321 |
rs1813077 | snp | C/T | 0.48818 | 0.0759629 | intron-variant | TRIM2 | GRCh38.p7 | 4:153320726 | AGAATCACTTGAACC[C/T]GGGAGATGAAGGTTG | 23321 |
rs1899043 | snp | A/G | 0.00676609 | 0.0577691 | | | GRCh38.p7 | 4:153279885 | GAAGCAGAGATTGCA[A/G]TGAGCCAAGATTGTG | 23321 |
rs1985427 | snp | A/G | 0.483923 | 0.0882034 | intron-variant | TRIM2 | GRCh38.p7 | 4:153322268 | CAAAAAAAATTAGCC[A/G]GGCATGGTGGTGCAC | 23321 |
rs2033880 | snp | G/T | 0.490007 | 0.0699769 | intron-variant | TRIM2 | GRCh38.p7 | 4:153311370 | CAGACAGTAGCAGCT[G/T]ATAAAAGGAAAAGAA | 23321 |
rs2053392 | snp | C/T | 0 | 0 | intron-variant | TRIM2 | GRCh38.p7 | 4:153315708 | TATTTGAAGAAAAGT[C/T]TACATAAACATAAGC | 23321 |
rs2053393 | snp | C/T | | | intron-variant | TRIM2 | GRCh38.p7 | 4:153315664 | CCATGTATCTGAAGT[C/T]TAAAGTAGGAATATA | 23321 |
rs2119162 | snp | A/G | 0.425277 | 0.178263 | intron-variant | TRIM2 | GRCh38.p7 | 4:153269998 | CAGTGGCGCGATCTC[A/G]GCTCACTGCAACCTC | 23321 |
rs2119163 | snp | C/T | 0.319376 | 0.240181 | intron-variant | TRIM2 | GRCh38.p7 | 4:153270129 | GAGACGGGGTTTCAC[C/T]GTGTTAGCCAGGAGG | 23321 |
rs2119165 | snp | A/G | 0.488726 | 0.0742286 | intron-variant | TRIM2 | GRCh38.p7 | 4:153323040 | TTGTGAACTGCCACC[A/G]ATAAAAACCACACAA | 23321 |
rs2119166 | snp | C/T | 0.110519 | 0.207473 | intron-variant | TRIM2 | GRCh38.p7 | 4:153322509 | ACTCATATATCACAA[C/T]GAACTTCTGTCTTGG | 23321 |
rs2196878 | snp | C/G | 0.00755907 | 0.0610114 | intron-variant | TRIM2 | GRCh38.p7 | 4:153277128 | TTACCTCATCTCCCA[C/G]CATTCTCTCTGCACA | 23321 |
rs2289409 | snp | G/T | 0.294304 | 0.246043 | synonymous-codon, utr-variant-5-prime | TRIM2 | GRCh38.p7 | 4:153276082 | CCTGGAGACAGTCAC[G/T]GCTGTGGCTGCGGGA | 23321 |
rs2405967 | snp | A/G | 0.326741 | 0.23793 | intron-variant | TRIM2 | GRCh38.p7 | 4:153333093 | ataccagtttgttta[A/G]tcatgaacctattga | 23321 |
rs2405968 | snp | A/C | | | intron-variant | TRIM2 | GRCh38.p7 | 4:153322075 | AATAGTCTAGGATCC[A/C]CTAAACTGGGGTCAC | 23321 |
rs2405969 | snp | A/G | 0.0599851 | 0.162463 | intron-variant | TRIM2 | GRCh38.p7 | 4:153318734 | AAAACTCCTGTCTCC[A/G]TAAGTGAACCTATTT | 23321 |
rs2405970 | snp | G/T | 0.312348 | 0.242101 | intron-variant | TRIM2 | GRCh38.p7 | 4:153304185 | TGGAGATTAAAGTGA[G/T]CTGAGATCATGTCAC | 23321 |
rs2405971 | snp | G/T | 0.497586 | 0.0346604 | intron-variant | TRIM2 | GRCh38.p7 | 4:153297109 | TCCCAAGACGTTCCA[G/T]GGAAAAAGTTCTATG | 23321 |
rs2405972 | snp | A/T | 0 | 0 | intron-variant | TRIM2 | GRCh38.p7 | 4:153278826 | AGGTAACATTTAttt[A/T]ttttttcttaatttt | 23321 |
rs2897291 | snp | C/T | 0.310386 | 0.242597 | intron-variant | TRIM2 | GRCh38.p7 | 4:153304396 | ccgggcatggtggct[C/T]acgcctgtaatccca | 23321 |
rs3048122 | in-del | -/AAAA | | | intron-variant, upstream-variant-2KB | TRIM2 | GRCh38.p7 | 4:153280385 | aaaaaaaaaaaaaaa[-/AAAA]GGAATTTGCTGGGGT | 23321 |
rs3048123 | in-del | -/TT | 0 | 0 | intron-variant, upstream-variant-2KB | TRIM2 | GRCh38.p7 | 4:153279958 | ttttttttttttttt[-/TT]gagacagagtctcac | 23321 |
rs3749538 | snp | C/T | 0.277334 | 0.248501 | utr-variant-3-prime | TRIM2 | GRCh38.p7 | 4:153335743 | GGAAACAAACTGCCC[C/T]GTTAACTCCAGATCA | 23321 |
rs3932869 | snp | C/T | 0 | 0 | missense | TRIM2 | GRCh38.p7 | 4:153315497 | AACTCTCCTTTATTT[C/T]TTCCTTTG | 23321 |
rs4078125 | snp | C/T | 0.0919752 | 0.193722 | intron-variant | TRIM2 | GRCh38.p7 | 4:153156806 | TGTTGTACCTCTGGT[C/T]AAGATAGTCTTGTCT | 23321 |
rs4132714 | snp | A/T | 0.495483 | 0.0473088 | intron-variant | TRIM2 | GRCh38.p7 | 4:153258761 | CTCTCCTTACATATA[A/T]ACTGGAGTTTAAAAC | 23321 |
rs4235229 | snp | A/G | 0.398714 | 0.200958 | intron-variant | TRIM2 | GRCh38.p7 | 4:153155545 | TCAAATGTGTGAGGG[A/G]CTGAGAAGGATGGAG | 23321 |
rs4235230 | snp | A/G | 0.447809 | 0.152878 | intron-variant | TRIM2 | GRCh38.p7 | 4:153166911 | ATGCTTCCACCTCCC[A/G]GGGGTCTGTCTGGAG | 23321 |
rs4274823 | snp | C/T | 0.483199 | 0.0901004 | intron-variant | TRIM2 | GRCh38.p7 | 4:153211096 | TGAGGCTGCCTTTTT[C/T]TCTCACAAGCCATGC | 23321 |
rs4282151 | snp | A/G | 0.498459 | 0.0277128 | intron-variant | TRIM2 | GRCh38.p7 | 4:153179048 | tttaaaaattagccc[A/G]ggtatggtggcactt | 23321 |
rs4311294 | snp | G/T | 0.48692 | 0.0798058 | intron-variant | TRIM2 | GRCh38.p7 | 4:153215424 | TGATGTGGTGCCGTT[G/T]TGCTAGAGTCCAAGT | 23321 |
rs4330341 | snp | G/T | 0.478437 | 0.10157 | intron-variant | TRIM2 | GRCh38.p7 | 4:153207796 | GTCCCTCAGGGTCAC[G/T]GTTTTCTATCTGTCC | 23321 |
rs4358380 | snp | A/T | 0.271702 | 0.249056 | intron-variant | TRIM2 | GRCh38.p7 | 4:153213451 | TCGAATCGCTAACAA[A/T]GTGATGGGCTCTGTT | 23321 |
rs4379048 | snp | C/T | 0.131381 | 0.220067 | intron-variant | TRIM2 | GRCh38.p7 | 4:153211141 | TAGCGGCCATCTGCA[C/T]ACCGACCTGGTGGTG | 23321 |
rs4411965 | snp | A/G | 0.107694 | 0.205546 | intron-variant | TRIM2 | GRCh38.p7 | 4:153211365 | GCTGGTTGTAAACCT[A/G]CTCCTTGATAAAAGA | 23321 |
rs4416460 | snp | G/T | 0.47726 | 0.104176 | intron-variant | TRIM2 | GRCh38.p7 | 4:153168945 | CAATAGCTGGGCATG[G/T]TGGCACATGCCTGTA | 23321 |
rs4435731 | snp | A/T | 0.41023 | 0.191902 | intron-variant | TRIM2 | GRCh38.p7 | 4:153191537 | AGCTGTATAACTGAG[A/T]TGTATGGGGATTCCC | 23321 |
rs4449395 | snp | A/G | 0.338523 | 0.233803 | intron-variant | TRIM2 | GRCh38.p7 | 4:153191539 | CTGTATAACTGAGTT[A/G]TATGGGGATTCCCCA | 23321 |
rs4476580 | snp | A/C/T | | | intron-variant | TRIM2 | GRCh38.p7 | 4:153190956 | TGGCCAGGCTGGTCT[A/C/T]GAACTCCTGACCCCA | 23321 |
rs4490437 | snp | C/T | 0.0256215 | 0.110247 | intron-variant | TRIM2 | GRCh38.p7 | 4:153189254 | TGAGGGGAAAAGTTT[C/T]ACTGCCAAGCAGGAA | 23321 |
rs4522848 | snp | C/T | 0.131723 | 0.220251 | intron-variant | TRIM2 | GRCh38.p7 | 4:153226939 | ATACTATGTTCTGAG[C/T]CCCCTGCTTATGATC | 23321 |
rs4543093 | snp | A/G | 0.404035 | 0.196909 | intron-variant | TRIM2 | GRCh38.p7 | 4:153183307 | TATTTCACATTCCCC[A/G]TGATAAAGCCCAGTG | 23321 |
rs4558854 | snp | A/G | 0.000399281 | 0.0141238 | intron-variant | TRIM2 | GRCh38.p7 | 4:153315671 | CTACTTTAGACTTCA[A/G]ATACATGGTGTAAGG | 23321 |
rs4574388 | snp | A/G | 0.293551 | 0.246177 | intron-variant | TRIM2 | GRCh38.p7 | 4:153317132 | TGATCCGCCCGCCTC[A/G]GCCTCCCAAAGTGCT | 23321 |
rs4583738 | snp | A/G | 0.404559 | 0.196498 | intron-variant | TRIM2 | GRCh38.p7 | 4:153183539 | GGCCATAGACAAAGG[A/G]GGAAGGGTGCTATGG | 23321 |
rs4596222 | snp | A/G | 0.181978 | 0.240568 | intron-variant | TRIM2 | GRCh38.p7 | 4:153233861 | TAAATGTTGCATTGC[A/G]TAATTTCTGCCACGG | 23321 |
rs4631020 | snp | C/T | 0.256619 | 0.249912 | intron-variant | TRIM2 | GRCh38.p7 | 4:153207119 | aatatatatttctta[C/T]tataaatcacaATAT | 23321 |
rs4635803 | snp | C/T | 0.439224 | 0.163383 | intron-variant | TRIM2 | GRCh38.p7 | 4:153196342 | ctcaggaagttgagg[C/T]gggaggattgcttga | 23321 |
rs4696170 | snp | C/T | 0.429837 | 0.173662 | intron-variant | TRIM2 | GRCh38.p7 | 4:153158736 | TAGAAGAGGGGAAAC[C/T]GATATTCTTGGACAC | 23321 |
rs4696171 | snp | A/T | 0.43221 | 0.171171 | intron-variant | TRIM2 | GRCh38.p7 | 4:153164846 | TATATTACTAGGACC[A/T]TGTAAATATTGTCAC | 23321 |
rs4696172 | snp | C/G | 0.0279526 | 0.114869 | intron-variant | TRIM2 | GRCh38.p7 | 4:153165003 | agtcttcttcaaatg[C/G]tccaacagatatgtc | 23321 |
rs4696173 | snp | A/G | 0.486595 | 0.0807641 | intron-variant | TRIM2 | GRCh38.p7 | 4:153165021 | caacagatatgtcac[A/G]attattaaagttttt | 23321 |
rs4696174 | snp | C/T | 0.00517822 | 0.0506191 | intron-variant | TRIM2 | GRCh38.p7 | 4:153236597 | AGATTGTCCTTTATA[C/T]AGCAGTTTCTTTACA | 23321 |
rs4696175 | snp | C/T | 0.237014 | 0.249662 | intron-variant | TRIM2 | GRCh38.p7 | 4:153238813 | GGATGCTTTAAGTCA[C/T]TGCAAGAGGCCAGGA | 23321 |
rs4696176 | snp | C/T | 0.42574 | 0.177808 | intron-variant | TRIM2 | GRCh38.p7 | 4:153238965 | GACGGTATTTGGAGA[C/T]GGAGCCTTTGGAAGG | 23321 |
rs4696177 | snp | C/G/T | 0.429871 | 0.179027 | intron-variant | TRIM2 | GRCh38.p7 | 4:153239215 | aaattagccaggcgt[C/G/T]gtggcgggcacctgt | 23321 |
rs4696178 | snp | C/T | 0.425432 | 0.178112 | intron-variant | TRIM2 | GRCh38.p7 | 4:153239220 | agccaggcgtcgtgg[C/T]gggcacctgtagtcc | 23321 |
rs4696179 | snp | A/G | 0.381697 | 0.212499 | intron-variant, upstream-variant-2KB | TRIM2, LOC105377496 | GRCh38.p7 | 4:153250190 | AGAGGCCCCATCTCA[A/G]CTTACTACAACCTCA | 23321 |
rs4696180 | snp | C/T | 0.49889 | 0.0235361 | intron-variant | TRIM2 | GRCh38.p7 | 4:153267434 | gaggcgggtggatca[C/T]gaggtcaggagatcg | 23321 |
rs4696181 | snp | C/T | 0.498794 | 0.0245311 | intron-variant | TRIM2 | GRCh38.p7 | 4:153267468 | ccatcctggctaaca[C/T]ggtgaaaccccatct | 23321 |
rs4696182 | snp | A/G | 0.499722 | 0.0117779 | intron-variant | TRIM2 | GRCh38.p7 | 4:153267480 | acatggtgaaacccc[A/G]tctctactaaaaata | 23321 |
rs4696183 | snp | A/C | 0.498714 | 0.0253268 | intron-variant | TRIM2 | GRCh38.p7 | 4:153268237 | caatttagggaggtt[A/C]agactcttgcagcca | 23321 |
rs4696184 | snp | A/T | 0.308414 | 0.24308 | intron-variant | TRIM2 | GRCh38.p7 | 4:153271602 | GTGTGCTTGTGTATA[A/T]GGGTTTTGGTTTGTT | 23321 |
rs4696426 | snp | A/T | 0.3752 | 0.216391 | intron-variant | TRIM2 | GRCh38.p7 | 4:153159107 | GTTCATTGCATACAG[A/T]TGATTAGTCTGTGAT | 23321 |
rs4696427 | snp | C/T | 0.457154 | 0.139954 | intron-variant | TRIM2 | GRCh38.p7 | 4:153165193 | tttgtaattcttcta[C/T]attagattctctttt | 23321 |
rs4696428 | snp | C/T | 0.4776 | 0.103433 | intron-variant | TRIM2 | GRCh38.p7 | 4:153166368 | tgattggagtctttg[C/T]gtgattgatgggttt | 23321 |
rs4696429 | snp | A/G | 0.477684 | 0.103247 | intron-variant | TRIM2 | GRCh38.p7 | 4:153166460 | atcccaaaaggcagt[A/G]CTGGAAGGATTTTCc | 23321 |
rs4696430 | snp | A/G | 0.472052 | 0.11486 | intron-variant | TRIM2 | GRCh38.p7 | 4:153166582 | atgaggtctcactcc[A/G]ccacccaggctggag | 23321 |
rs4696431 | snp | G/T | 0.472147 | 0.114677 | intron-variant | TRIM2 | GRCh38.p7 | 4:153166644 | TCACCCTCAACCTGG[G/T]CTCATGTGATCCTCC | 23321 |
rs4696432 | snp | A/G | 0.424348 | 0.179172 | intron-variant | TRIM2 | GRCh38.p7 | 4:153166652 | AACCTGGGCTCATGT[A/G]ATCCTCCTGCATCTG | 23321 |
rs4696433 | snp | A/G | 0.163564 | 0.234582 | intron-variant | TRIM2 | GRCh38.p7 | 4:153166791 | CTTCTGCTTTGGGTA[A/G]ATAAAAGTGACTTCC | 23321 |
rs4696434 | snp | G/T | 0.472052 | 0.11486 | intron-variant | TRIM2 | GRCh38.p7 | 4:153166998 | TTAACCACAGGGCTG[G/T]CAGGGTGTGTGTGGT | 23321 |
rs4696436 | snp | A/G | 0.245061 | 0.249951 | intron-variant | TRIM2 | GRCh38.p7 | 4:153206012 | TTGACTCTCCCAGGT[A/G]GGGTGGAGGCTCCAA | 23321 |
rs4696437 | snp | A/G | 0.261056 | 0.249755 | intron-variant | TRIM2 | GRCh38.p7 | 4:153209287 | CTCACACCACCTCCC[A/G]CACTTATTAGCATGC | 23321 |
rs4696438 | snp | C/T | 0.41441 | 0.188333 | intron-variant | TRIM2 | GRCh38.p7 | 4:153219854 | GCTTCGGTGACAGAG[C/T]CAGATCCTGTCTCGA | 23321 |
rs4696439 | snp | C/T | 0.391024 | 0.206427 | intron-variant | TRIM2 | GRCh38.p7 | 4:153220974 | tagcgtatgacccag[C/T]gatttcactcctagg | 23321 |
rs4696440 | snp | A/C | 0.39121 | 0.2063 | intron-variant | TRIM2 | GRCh38.p7 | 4:153221021 | atgaaaatatatgtc[A/C]actcaaaaacttgca | 23321 |
rs4696441 | snp | A/G | 0.391024 | 0.206427 | intron-variant | TRIM2 | GRCh38.p7 | 4:153221107 | tgtctatcaaatgtt[A/G]aacagataagcaaaa | 23321 |
rs4696442 | snp | A/C | 0.00636936 | 0.0560724 | intron-variant | TRIM2 | GRCh38.p7 | 4:153229168 | AAGGACAAAGAAATT[A/C]GATTTCTTAGGGATT | 23321 |
rs4696443 | snp | A/G | 0.362313 | 0.223351 | intron-variant | TRIM2 | GRCh38.p7 | 4:153230836 | CCTATAATTTCATCA[A/G]CATAGCAGGTAACTA | 23321 |