SNP - dbSNP |
dbSNP | Type | Alleles | Het | Se(het) | Fxn-class | Gene Name | Assembly | Chr-pos | Sequence | Entrez Gene |
rs733156 | snp | C/T | 0.412416 | 0.190055 | intron-variant | SATB2 | GRCh38.p7 | 2:199300922 | GAATTTGGAAGGCGG[C/T]GTGTTATGGAGGTCC | 23314 |
rs895526 | snp | C/T | 0.445987 | 0.155207 | intron-variant | SATB2 | GRCh38.p7 | 2:199297702 | ATCATCACTACATGG[C/T]TCTTTCACAACTTTG | 23314 |
rs895882 | snp | A/G | 0.499295 | 0.0187567 | intron-variant | SATB2 | GRCh38.p7 | 2:199438292 | TTATATATTGTTATT[A/G]GGCAGATTCATTAGA | 23314 |
rs930615 | snp | C/T | 0.16618 | 0.23553 | intron-variant | SATB2 | GRCh38.p7 | 2:199321365 | CTATGTATAGACATA[C/T]ATATATATCTATACA | 23314 |
rs930616 | snp | A/G | 0.499872 | 0.0079862 | intron-variant | SATB2 | GRCh38.p7 | 2:199321192 | CATGACTAATCATAG[A/G]ACTTAACCTTTTCAA | 23314 |
rs961708 | snp | C/T | 0.0379877 | 0.132479 | intron-variant | SATB2 | GRCh38.p7 | 2:199317171 | AACAAGCAACTAGGG[C/T]ATGAAATGTAAACAG | 23314 |
rs961709 | snp | C/T | 0.158962 | 0.232835 | intron-variant | SATB2 | GRCh38.p7 | 2:199317371 | CGATGTCCTCTTCCC[C/T]AACCAGCTGGGGAGA | 23314 |
rs971697 | snp | A/G | 0.164546 | 0.234942 | intron-variant | SATB2 | GRCh38.p7 | 2:199313602 | TTGTAAACAAACTAT[A/G]TCTTGACTGGTAGGA | 23314 |
rs971698 | snp | C/T | 0.404559 | 0.196498 | intron-variant | SATB2 | GRCh38.p7 | 2:199313566 | ATCTCACCTGCATAG[C/T]TGGAAGGGCAGTCAG | 23314 |
rs973906 | snp | A/G | 0 | 0 | intron-variant | SATB2 | GRCh38.p7 | 2:199311594 | AGCGCCCGTAGGAGG[A/G]AATAACGGCCTTTAG | 23314 |
rs986823 | snp | A/G | | | intron-variant | SATB2 | GRCh38.p7 | 2:199400114 | AGTACTTCCAGAGGG[A/G]ATAGCACTTTTCCTA | 23314 |
rs987281 | snp | A/G | 0.497387 | 0.0360476 | intron-variant, nc-transcript-variant | SATB2 | GRCh38.p7 | 2:199396507 | TGCATTTGGAATGTA[A/G]AAGAAAATGACCTCT | 23314 |
rs991501 | snp | A/G | 0.487305 | 0.0786545 | intron-variant | SATB2 | GRCh38.p7 | 2:199444201 | CCAAGAGATTTATAT[A/G]CAGAGACTTAAATAG | 23314 |
rs994185 | snp | A/G | 0.370974 | 0.218781 | intron-variant | SATB2 | GRCh38.p7 | 2:199277868 | AAACAAATTATCTAC[A/G]CTTTTGGAACTCCAG | 23314 |
rs1011831 | snp | C/T | 0.29278 | 0.246313 | intron-variant | SATB2 | GRCh38.p7 | 2:199329555 | AAATCTTTTATGAAA[C/T]GTCTTCATGGGGGAA | 23314 |
rs1011832 | snp | C/T | 0.499872 | 0.0079862 | intron-variant | SATB2 | GRCh38.p7 | 2:199329842 | AAGGTGGGACATTGT[C/T]GTACTGGGGGTAGGT | 23314 |
rs1011833 | snp | A/G | 0.298651 | 0.24522 | intron-variant | SATB2 | GRCh38.p7 | 2:199330146 | TAATATGTGGCTTAA[A/G]TATGAAAAGGCAATG | 23314 |
rs1014497 | snp | A/G | 0.49998 | 0.00319482 | intron-variant | SATB2 | GRCh38.p7 | 2:199376506 | CACTAGATGCCACTA[A/G]CATGCCACTATACCC | 23314 |
rs1026121 | snp | A/G | 0.175576 | 0.238665 | intron-variant | SATB2 | GRCh38.p7 | 2:199388081 | GATAATACACATTAT[A/G]GTCGATCAATATTTG | 23314 |
rs1037135 | snp | A/C | 0.499866 | 0.0081858 | intron-variant | SATB2 | GRCh38.p7 | 2:199329465 | CAAAGCAAATGGCTA[A/C]ATTGTGTTAACCCTC | 23314 |
rs1037136 | snp | A/G | 0.165527 | 0.235296 | intron-variant | SATB2 | GRCh38.p7 | 2:199329553 | CCAAATCTTTCATGA[A/G]ACGTCTTCATGGGGG | 23314 |
rs1348812 | snp | C/T | 0.348794 | 0.229651 | intron-variant | SATB2 | GRCh38.p7 | 2:199371702 | AACAGTCCAACTGTG[C/T]GGTTGCTTTAGAATG | 23314 |
rs1348813 | snp | C/G | 0.445017 | 0.156424 | intron-variant | SATB2 | GRCh38.p7 | 2:199380522 | GGGACCCTGGTTGAG[C/G]TTTGTGTATTGTTCA | 23314 |
rs1374355 | snp | A/T | 0.38555 | 0.210062 | intron-variant | SATB2 | GRCh38.p7 | 2:199291470 | AAGCATTTTGGCATT[A/T]AACAACATTTTTTTA | 23314 |
rs1374356 | snp | C/T | 0.432944 | 0.170387 | intron-variant | SATB2 | GRCh38.p7 | 2:199336848 | CAGACTTGCTGGATT[C/T]GAAATTGGGCTCTAA | 23314 |
rs1374357 | snp | A/G | 0.432944 | 0.170387 | intron-variant | SATB2 | GRCh38.p7 | 2:199336882 | GACAAGTATCAATTA[A/G]TCTCCCTATGGCACA | 23314 |
rs1374358 | snp | C/G | 0.179425 | 0.239831 | intron-variant | SATB2 | GRCh38.p7 | 2:199340429 | AATGAACTGAAGGAG[C/G]AAGATACCAAATTAG | 23314 |
rs1374359 | snp | C/T | 0.370568 | 0.219005 | intron-variant | SATB2 | GRCh38.p7 | 2:199404616 | AGTATTGCTTTAATG[C/T]TATGTGTCTTTTTAG | 23314 |
rs1374361 | snp | C/T | 0.404907 | 0.196224 | intron-variant | SATB2 | GRCh38.p7 | 2:199306011 | ATATGTAGGGTAATA[C/T]TAGTTTGGTGATGTT | 23314 |
rs1446636 | snp | G/T | 0.379354 | 0.213933 | intron-variant | SATB2 | GRCh38.p7 | 2:199292872 | TTAAGCCAGCCAAGT[G/T]TATTTAGCAAATAGA | 23314 |
rs1446637 | snp | A/C | 0.302435 | 0.244439 | intron-variant | SATB2 | GRCh38.p7 | 2:199295554 | ACAATTGGCTTCTGC[A/C]AGCCAGAGTAGGCTT | 23314 |
rs1446638 | snp | A/G | 0.0322114 | 0.122752 | intron-variant | SATB2 | GRCh38.p7 | 2:199297647 | CAGATCTGCTAATGG[A/G]GGAGATGCCTATTTA | 23314 |
rs1446639 | snp | C/T | 0.000399281 | 0.0141238 | intron-variant | SATB2 | GRCh38.p7 | 2:199336389 | TTTCCATGAATGTTC[C/T]GTAAAACAACTGTTG | 23314 |
rs1446640 | snp | A/G | 0.416382 | 0.186593 | intron-variant | SATB2 | GRCh38.p7 | 2:199337166 | AGGCAGAAAATATAA[A/G]TAACTTACAGGAAAT | 23314 |
rs1446641 | snp | A/G | 0 | 0 | intron-variant | SATB2 | GRCh38.p7 | 2:199329104 | ATATGCATTATTTTA[A/G]GACTGTTCTATTCTG | 23314 |
rs1446642 | snp | C/G | 0.401747 | 0.198678 | intron-variant | SATB2 | GRCh38.p7 | 2:199316350 | GAAGCCCTTGACAAG[C/G]CTTCCTTGTAGTTAG | 23314 |
rs1446643 | snp | G/T | 0 | 0 | intron-variant | SATB2 | GRCh38.p7 | 2:199309901 | AGTGATGATATAGAA[G/T]TTGTTGAGGTTTGGG | 23314 |
rs1446644 | snp | G/T | 0 | 0 | intron-variant | SATB2 | GRCh38.p7 | 2:199309893 | TATAGAATTTGTTGA[G/T]GTTTGGGAATTATTT | 23314 |
rs1446645 | snp | C/G | 0.00597247 | 0.0543191 | intron-variant | SATB2 | GRCh38.p7 | 2:199307448 | CTTTCCCTTCTTGGT[C/G]CTTTTCTGACCGAAG | 23314 |
rs1446646 | snp | A/G | 0.211212 | 0.246973 | intron-variant | SATB2 | GRCh38.p7 | 2:199379146 | GATAATATTTTTCCT[A/G]TGGTGGATTGGGGCT | 23314 |
rs1449064 | snp | A/G | 0.495782 | 0.0457324 | intron-variant | SATB2 | GRCh38.p7 | 2:199428608 | TCAGTTTCCTCTTCT[A/G]TGAAACGGGAAATGT | 23314 |
rs1449065 | snp | A/C | 0.384593 | 0.210677 | intron-variant | SATB2 | GRCh38.p7 | 2:199428783 | ACACCTTTAATCCCA[A/C]CACTTTGGGAGGCTG | 23314 |
rs1466032 | snp | A/G | 0.499989 | 0.00239614 | intron-variant | SATB2 | GRCh38.p7 | 2:199398144 | AAGAAATACTAATCT[A/G]TCAATAAAAAAACAG | 23314 |
rs1466033 | snp | A/C | 0.00676609 | 0.0577691 | intron-variant | SATB2 | GRCh38.p7 | 2:199398359 | CCCCCAAAATATGCT[A/C]TTTCTCATATTGATT | 23314 |
rs1542182 | snp | A/G | 0.423413 | 0.180077 | intron-variant | SATB2 | GRCh38.p7 | 2:199355671 | TGGGAAGAATTACCT[A/G]TAAAGTGGTCTTAAA | 23314 |
rs1542241 | snp | G/T | 0.499154 | 0.0205497 | intron-variant | SATB2 | GRCh38.p7 | 2:199436201 | TTTTAAAAATTAATA[G/T]GGTCTTAAGTTTTTT | 23314 |
rs1542242 | snp | A/G | 0.495855 | 0.045338 | intron-variant | SATB2 | GRCh38.p7 | 2:199430246 | AGTTGGGAGAGTGGG[A/G]CAGTTCCCAGAATAG | 23314 |
rs1542243 | snp | A/G | 0.495818 | 0.0455352 | intron-variant | SATB2 | GRCh38.p7 | 2:199430391 | TCCAGCTATTCTGGT[A/G]GAAGCAAAGGGCCTG | 23314 |
rs1545410 | snp | C/T | 0.132751 | 0.2208 | intron-variant | SATB2 | GRCh38.p7 | 2:199386175 | gtataatgcaactat[C/T]tcaaaatctgaaaaa | 23314 |
rs1545411 | snp | A/T | 0.0655868 | 0.168795 | intron-variant | SATB2 | GRCh38.p7 | 2:199386002 | tttatggagcactta[A/T]gtagcagtcccagtg | 23314 |
rs1562317 | snp | C/T | 0.179744 | 0.239925 | intron-variant | SATB2 | GRCh38.p7 | 2:199328077 | TAACTCCTAACTGAG[C/T]AGCTATGTATAAACA | 23314 |
rs1813849 | snp | A/G | 0.424968 | 0.178567 | intron-variant | SATB2 | GRCh38.p7 | 2:199278124 | TCTCTGAGTCACCTT[A/G]TCTCAAATAACTTCC | 23314 |
rs1814047 | snp | C/T | 0.0111728 | 0.0739025 | intron-variant, upstream-variant-2KB | SATB2 | GRCh38.p7 | 2:199461031 | ATGTTAGGAAAAAGC[C/T]TAAATTATTTAAAGT | 23314 |
rs1823126 | snp | A/C | 0.499784 | 0.0103811 | intron-variant | SATB2 | GRCh38.p7 | 2:199370425 | GGTTATTCACATATA[A/C]CAGTATGACTGATGC | 23314 |
rs1838858 | snp | A/T | 0.138207 | 0.223612 | intron-variant | SATB2 | GRCh38.p7 | 2:199298447 | ACTTAAGTATTTTTT[A/T]AAAAAGAAGAAATGG | 23314 |
rs1838859 | snp | C/T | 0.499885 | 0.00758699 | intron-variant | SATB2 | GRCh38.p7 | 2:199352021 | ATTACAGGCATATGC[C/T]GCCACCACACCCAAC | 23314 |
rs1867871 | snp | A/G | 0.148326 | 0.228391 | intron-variant | SATB2 | GRCh38.p7 | 2:199338933 | AAAAAAAAAAAAAAA[A/G]AAAGAAAGAAAGAAC | 23314 |
rs1868427 | snp | C/T | 0.294832 | 0.245947 | intron-variant | SATB2 | GRCh38.p7 | 2:199388497 | TAGATGCTGATAAAA[C/T]AGATATATATTGGGT | 23314 |
rs1900327 | snp | A/T | 0.436834 | 0.166111 | | | GRCh38.p7 | 2:199294326 | ACTGGTTGATTTCTT[A/T]TCAACAAAATGACAA | 23314 |
rs1922788 | snp | C/T | 0.0150606 | 0.0854603 | intron-variant | SATB2 | GRCh38.p7 | 2:199451545 | GGAGAAAACTCCATT[C/T]CCAAGGATGAATATC | 23314 |
rs1992949 | snp | C/T | 0.104504 | 0.2033 | intron-variant | SATB2 | GRCh38.p7 | 2:199425482 | TTTCCACTGATAGGA[C/T]TTTTTTTAGTGGGCA | 23314 |
rs1992950 | snp | A/G | 0.495855 | 0.045338 | intron-variant | SATB2 | GRCh38.p7 | 2:199425636 | TCTTCACCCTCTACA[A/G]ATTAACATATAAACA | 23314 |
rs2007258 | snp | C/G | 0.391397 | 0.206172 | intron-variant | SATB2 | GRCh38.p7 | 2:199279671 | ATGAATATACCTTAC[C/G]CTACAGGACCTGAAG | 23314 |
rs2009622 | snp | A/C | 0.495927 | 0.0449436 | intron-variant | SATB2 | GRCh38.p7 | 2:199302513 | TAGAAGTAGGTCCTC[A/C]CTTGGGAAGATGTTG | 23314 |
rs2011269 | snp | A/G | 0.479258 | 0.0997024 | intron-variant | SATB2 | GRCh38.p7 | 2:199323508 | TCTCCCTTTATATAT[A/G]TGTGTGTGTGTGTGT | 23314 |
rs2077452 | snp | C/T | 0.00119737 | 0.0244387 | intron-variant | SATB2 | GRCh38.p7 | 2:199437839 | AAGGCCTATAATCAA[C/T]GTTCACGATACTAAA | 23314 |
rs2084216 | snp | A/G | 0.0414363 | 0.137845 | intron-variant | SATB2 | GRCh38.p7 | 2:199338844 | atcgcttgaacctag[A/G]aggcagaggttgcag | 23314 |
rs2121376 | snp | A/G | 0 | 0 | intron-variant | SATB2 | GRCh38.p7 | 2:199401340 | ACTACGAGGTCAGGA[A/G]TTCAAGACCAGCCTG | 23314 |
rs2121377 | snp | A/G | 0.155325 | 0.23138 | intron-variant | SATB2 | GRCh38.p7 | 2:199284164 | cttaatagtttccca[A/G]tacttaacttttttg | 23314 |
rs2121378 | snp | C/T | 0.41441 | 0.188333 | intron-variant | SATB2 | GRCh38.p7 | 2:199329548 | GGCACCCAAATCTTT[C/T]ATGAGACGTCTTCAT | 23314 |
rs2121379 | snp | C/G | 0.124491 | 0.216211 | intron-variant | SATB2 | GRCh38.p7 | 2:199329579 | GGGGGAAACCCTAAT[C/G]TCACCATTAAAGCAA | 23314 |
rs2141935 | snp | C/T | 0.000399281 | 0.0141238 | upstream-variant-2KB, intron-variant | SATB2, SATB2-AS1 | GRCh38.p7 | 2:199466768 | CAGTTGAGCTATTTT[C/T]TGAAGATGTGGATAC | 23314 |
rs2166517 | snp | A/G | 0.416055 | 0.186885 | intron-variant | SATB2 | GRCh38.p7 | 2:199325490 | TGGGAAAGTCCCAAC[A/G]TAGCAAGAAAATTCT | 23314 |
rs2167006 | snp | A/T | 0.422787 | 0.180679 | intron-variant | SATB2 | GRCh38.p7 | 2:199367013 | AGTGTCCTCTTTTAA[A/T]AGGCTGGAGTGTAAT | 23314 |
rs2197596 | snp | A/G | 0 | 0 | intron-variant | SATB2 | GRCh38.p7 | 2:199358645 | CAATGCTGGCTGGTA[A/G]GCTTTGCTTATGGGC | 23314 |
rs2197867 | snp | A/C | 0.0460142 | 0.144533 | upstream-variant-2KB, nc-transcript-variant | SATB2, SATB2-AS1 | GRCh38.p7 | 2:199472590 | GAGAAACGCCCCATG[A/C]ACTGAGCTGAGACTG | 23314 |
rs2305262 | snp | A/G | 0.481856 | 0.0935034 | intron-variant | SATB2 | GRCh38.p7 | 2:199381595 | TGTCTATTAATTTCT[A/G]GACATTGGACAAAAT | 23314 |
rs2305263 | snp | A/G | 0.00119737 | 0.0244387 | intron-variant | SATB2 | GRCh38.p7 | 2:199380691 | TTCTTGGATGAGTGG[A/G]ATGACAAACTCAAAA | 23314 |
rs2345726 | snp | A/G | 0.0379877 | 0.132479 | intron-variant | SATB2 | GRCh38.p7 | 2:199301475 | GCTTTCTATTTCCCA[A/G]TCTTCTTGAGGTTAT | 23314 |
rs2345727 | snp | A/C/G | 0.5 | 0 | intron-variant | SATB2 | GRCh38.p7 | 2:199355348 | TGTGTGTGTGTGTAT[A/C/G]TATATATATATATAT | 23314 |
rs2345728 | snp | C/T | 0.370568 | 0.219005 | intron-variant | SATB2 | GRCh38.p7 | 2:199403912 | TGGGATGGCAGGATA[C/T]CAACCTGACAAGGAG | 23314 |
rs2345729 | snp | G/T | 0.495927 | 0.0449436 | intron-variant | SATB2 | GRCh38.p7 | 2:199429483 | ATTTAAATGACTGCA[G/T]GAATGTAATTACTCC | 23314 |
rs2881208 | snp | C/T | 0.492727 | 0.0598633 | intron-variant | SATB2 | GRCh38.p7 | 2:199272885 | TAGTATTTGCCATCA[C/T]TTATATTCTGAGATG | 23314 |
rs3048311 | in-del | -/AAG | 0 | 0 | intron-variant | SATB2 | GRCh38.p7 | 2:199321085 | AAAGAAAAATAAAAG[-/AAG]GAGGGAAGAAAATGC | 23314 |
rs3048312 | snp | C/T | 0.297521 | 0.245442 | intron-variant | SATB2 | GRCh38.p7 | 2:199323478 | TAAGTTTTGTTCATA[C/T]ACACACACACACACA | 23314 |
rs3048313 | in-del | -/TA | 0.5 | 0 | intron-variant | SATB2 | GRCh38.p7 | 2:199323515 | acacacacaTATATA[-/TA]AAGGGAGAGAAACAA | 23314 |
rs3748904 | snp | C/T | 0.404733 | 0.196361 | intron-variant | SATB2 | GRCh38.p7 | 2:199308589 | GCACACACACACACA[C/T]ACACATACACACAGT | 23314 |
rs3762490 | snp | C/T | 0.00119737 | 0.0244387 | upstream-variant-2KB, nc-transcript-variant | SATB2, SATB2-AS1 | GRCh38.p7 | 2:199472694 | TCCCGCATATTTTGT[C/T]GTTCTTAGTTAGGCA | 23314 |
rs3811536 | snp | A/C | 0.0322114 | 0.122752 | intron-variant | SATB2 | GRCh38.p7 | 2:199460101 | CAAACGCTGCCTAAA[A/C]CTCCCAGGGTGGCTC | 23314 |
rs3828186 | snp | C/T | 0.141934 | 0.225437 | intron-variant | SATB2 | GRCh38.p7 | 2:199349550 | CTATCTTCTGTAGTA[C/T]GTAGTTAATGGTTAT | 23314 |
rs3833553 | in-del | -/AC | | | intron-variant | SATB2 | GRCh38.p7 | 2:199308563 | tacacacacacacac[-/AC]gcacgcacatgcaca | 23314 |
rs3902023 | snp | G/T | 0.0486741 | 0.148216 | intron-variant | SATB2 | GRCh38.p7 | 2:199456841 | AAGCAAAAAGCATTT[G/T]AATTCTTAGTGCAAG | 23314 |
rs3948119 | snp | A/G | 0.164546 | 0.234942 | intron-variant | SATB2 | GRCh38.p7 | 2:199322917 | TTCCTCTGTGTCCTT[A/G]TATGACAAATGTTTT | 23314 |
rs4144841 | snp | C/T | 0.325563 | 0.238307 | intron-variant | SATB2 | GRCh38.p7 | 2:199355817 | CCTTAGATATCTCTA[C/T]TAAACTCACCATTAC | 23314 |
rs4337424 | snp | A/C | 0.0107246 | 0.0724382 | intron-variant, upstream-variant-2KB | SATB2, SATB2-AS1 | GRCh38.p7 | 2:199467607 | GGCAGGAATTCCCTC[A/C]CTCTGCAGCCCAGCT | 23314 |
rs4343415 | snp | G/T | 0 | 0 | intron-variant | SATB2 | GRCh38.p7 | 2:199387559 | ATCTGCAAACATTTA[G/T]AAAATGCTTGGTGTT | 23314 |
rs4673305 | snp | A/G | 0.00119737 | 0.0244387 | intron-variant | SATB2 | GRCh38.p7 | 2:199280043 | ctacttgggtgttgc[A/G]ggaagtcagggaccc | 23314 |
rs4673308 | snp | G/T | 0.125874 | 0.217008 | intron-variant | SATB2 | GRCh38.p7 | 2:199282274 | TCCTTTTTAGCAAAA[G/T]AATGTTTAAAAAATA | 23314 |
rs4673309 | snp | A/G | 0.393434 | 0.20476 | intron-variant | SATB2 | GRCh38.p7 | 2:199282686 | TACAAAACGTGAGGA[A/G]TATTTAAGAATCAGG | 23314 |
rs4673313 | snp | C/T | 0.432504 | 0.170857 | intron-variant | SATB2 | GRCh38.p7 | 2:199324600 | CTTAAACTCATATTG[C/T]GGTTTTATGTATTCT | 23314 |