DNA & RNA Element - UTRdb Gene Name Type ASPicDB UTRaspic Refseq ID Genome DNAI1 3'UTR 196bf03b53 BA030794 NM_012144 chr9:34510755-34510982:+ DNAI1 3'UTR 8c9599dffc BA030795 NM_012144 chr9:34504659-34507465:+ DNAI1 3'UTR eb72d313e4 NM_012144 chr9:34504659-34507465:+ DNAI1 3'UTR dab2039714 NM_012144 chr9:34505029-34505327:+ DNAI1 3'UTR eafc4c574a NM_012144 chr9:34510755-34510983:+ DNAI1 3'UTR 25f782d2bb NM_012144 chr9:34510755-34510983:+ DNAI1 5'UTR 196bf03b53 CA048585 NM_012144 chr9:34448811-34449003:+ DNAI1 5'UTR 8c9599dffc CA048586 NM_012144 chr9:34448750-34449003:+ DNAI1 5'UTR 55274c9829 NM_012144 chr9:34448814-34480396:+

DNA & RNA Element - AREsite Gene Name Motif CDS Area ARE Area Evidence DNAI1 ATTTA 1-718 835-839

DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0002812 hsa-miR-492 27019 DNAI1 uucuuagaacAGGGC--GUCCAGGa |||:| ||||||| gugaccccacUCCUGAUCAGGUCCc 2 14 90 114 [hg19:9:34520844-34520868:+] 0.5183 148 7 -19.51 -0.4802 MIMAT0002824 hsa-miR-498 27019 DNAI1 cuuuuuGCGGGGGACCGAACUUu :|:||| | ||||||| agucucUGUCCCAUCGCUUGAAu 2 18 13 35 [hg19:9:34520767-34520789:+] 0.5427 161 7 -19.18 -0.3343 MIMAT0005457 hsa-miR-518a-5p 27019 DNAI1 cuuucccgaaggGAAACGUc ||||||| uuaccccucuaaCUUUGCAc 2 9 186 205 [hg19:9:34520940-34520959:+] 0.5921 140 7 -8.74 -1.1146 MIMAT0002862 hsa-miR-527 27019 DNAI1 cuuucccgaaggGAAACGUc ||||||| uuaccccucuaaCUUUGCAc 2 9 186 205 [hg19:9:34520940-34520959:+] 0.5921 140 7 -8.74 -1.1146 MIMAT0003219 hsa-miR-555 27019 DNAI1 uagucuccaaGUCGAAUGGGa || ||||||| aaggucccagCACCUUACCCc 2 12 143 163 [hg19:9:34520897-34520917:+] 0.5253 147 7 -18.18 -0.1641 MIMAT0003256 hsa-miR-589* 27019 DNAI1 agacccuuggccguaAACAAGACu |||||||| cagcaucuucccuucUUGUUCUGu 2 10 114 137 [hg19:9:34520868-34520891:+] 0.5253 145 7 -12.11 -0.6679 MIMAT0010313 hsa-miR-762 27019 DNAI1 cgAGCCGGGGCCG-GGGUCGGGg |:| |||:||: |||||||| gcUUGACCCUGGUACCCAGCCCa 2 21 50 72 [hg19:9:34520804-34520826:+] 0.5113 171 7 -41.14 -0.3377 MIMAT0009206 hsa-miR-2113 27019 DNAI1 cacugucUCGGUUCGUGUUUa | |: ||||||| ccccucuAACUUUGCACAAAu 2 15 189 209 [hg19:9:34520943-34520963:+] 0.5921 142 7 -11.73 -1.1356 MIMAT0004925 hsa-miR-876-3p 27019 DNAI1 acUUAAUGAAACAUUUGGUGGu | ||: | | | ||||||| ggACUUGGUCU-UCAACCACCa 2 21 165 185 [hg19:9:34520919-34520939:+] 0.5253 150 7 -15.97 -0.7520 MIMAT0005890 hsa-miR-1302 27019 DNAI1 aaAUCGUAUUC--AUACAGGGUu |:|| | || | ||||||| gcUGGCCUCAGUCUCUGUCCCAu 2 20 4 26 [hg19:9:34520758-34520780:+] 0.5427 154 7 -15.18 -0.2002 MIMAT0005936 hsa-miR-1278 27019 DNAI1 uaucuACUAUACGUGUCAUGAu ||| || |||||||| ucgcuUGA-AU--ACAGUACUc 2 18 26 44 [hg19:9:34520780-34520798:+] 0.5113 148 7 -12.02 -0.4942 MIMAT0007890 hsa-miR-1914* 27019 DNAI1 ggagggucacgcccUGGGGAGg ||||||| cuucaaccaccauuACCCCUCu 2 9 174 195 [hg19:9:34520928-34520949:+] 0.5253 140 7 -21.49 -0.9568 MIMAT0015028 hsa-miR-3154 27019 DNAI1 agaCGAGGGUU---GAGGGGAAGAc | |||||: ||:||||||| ucaGGUCCCAGCAUCUUCCCUUCUu 2 20 106 130 [hg19:9:34520860-34520884:+] 0.5253 162 7 -27.57 -0.8567 MIMAT0015034 hsa-miR-3160 27019 DNAI1 acccgaaaGAUCAGAGUC-GAGa ||:| ||||| ||| ----ggggCUGGCCUCAGUCUCu 2 15 1 19 [hg19:9:34520755-34520773:+] 0.5741 122 0 -22.22 -0.1809 MIMAT0015078 hsa-miR-3194 27019 DNAI1 gucgggaggacCACCGACCGg | ||||||| -----------GGGGCUGGCc 2 11 1 10 [hg19:9:34520755-34520764:+] 0.5741 142 7 -20.62 -0.1470 MIMAT0015084 hsa-miR-3199 27019 DNAI1 uugaaaGAGGAUUCCGU-CAGGGa |||||:| || ||||| accccaCUCCUGA-UCAGGUCCCa 2 18 93 115 [hg19:9:34520847-34520869:+] 0.5253 123 0 -21.46 -0.4288 MIMAT0016844 hsa-miR-4295 27019 DNAI1 uuccuuUUGUAACGUGac ||| |||||| cccucuAACUUUGCACaa 3 13 190 207 [hg19:9:34520944-34520961:+] 0.5921 132 0 -8.00 -0.1807 MIMAT0016852 hsa-miR-4298 27019 DNAI1 gaCGGAGGAGGAGGACAGGGUc ||||| :|| |||||||| ugGCCUCAGUCU-CUGUCCCAu 2 21 6 26 [hg19:9:34520760-34520780:+] 0.5427 166 7 -30.45 -0.2002 MIMAT0000072 hsa-miR-18a 27019 DNAI1 gauAGAC--GUGA-UCUA----CGUGGAAu |||| | :| ||:| ||||||| uguUCUGUUCCUUAAGGUCCCAGCACCUUa 2 21 130 159 [hg19:9:34520884-34520913:+] 0.5253 141 7 -18.67 -0.4198 MIMAT0000073 hsa-miR-19a 27019 DNAI1 agucaaaacguAUCUAAACGUGu || ||||||| cauuaccccucUAACUUUGCACa 2 13 184 206 [hg19:9:34520938-34520960:+] 0.5921 144 7 -9.23 -1.1075 MIMAT0000074 hsa-miR-19b 27019 DNAI1 agucaaaacguaccuAAACGUGu ||||||| cauuaccccucuaacUUUGCACa 2 9 184 206 [hg19:9:34520938-34520960:+] 0.5921 140 7 -8.97 -1.1075 MIMAT0000259 hsa-miR-182 27019 DNAI1 ucacacucaAGAUGGUAACG-GUUu |||| | |||| ||| cauuaccccUCUAACUUUGCACAAa 2 16 184 208 [hg19:9:34520938-34520962:+] 0.5921 123 0 -9.99 -1.2206 MIMAT0000425 hsa-miR-130a 27019 DNAI1 uacGGGAAAAUUGUAACGUGac ||| | |||| |||||| uuaCCCCUCUAACUUUGCACaa 3 20 186 207 [hg19:9:34520940-34520961:+] 0.5921 151 0 -16.27 -0.1773 MIMAT0000688 hsa-miR-301a 27019 DNAI1 cgaaacuguuaUGAUAACGUGac ||| |||||| uuaccccucuaACU-UUGCACaa 3 13 186 207 [hg19:9:34520940-34520961:+] 0.5921 126 0 -8.34 -0.1663 MIMAT0000691 hsa-miR-130b 27019 DNAI1 uacGGGAAAGUAGUAACGUGac ||| | :| | |||||| uuaCCCCUCUAACUUUGCACaa 3 20 186 207 [hg19:9:34520940-34520961:+] 0.5921 139 0 -12.53 -0.1773 MIMAT0000724 hsa-miR-372 27019 DNAI1 ugCGAGUUUACAGCGUCGU-GAAa | |||: ||| ||||| ||| cuGAUCAG--GUCCCAGCAUCUUc 2 22 102 123 [hg19:9:34520856-34520877:+] 0.5253 126 0 -15.09 -0.3393 MIMAT0001412 hsa-miR-18b 27019 DNAI1 gauugacgugaucuaCGUGGAAu ||||||| uuccuuaaggucccaGCACCUUa 2 9 137 159 [hg19:9:34520891-34520913:+] 0.5253 140 7 -16.43 -0.4198 MIMAT0003885 hsa-miR-454 27019 DNAI1 ugGGAUAUUCGUUAUAACGUGau ||| ||| | | |||||| ccCCUCUAA-C--U-UUGCACaa 3 22 189 207 [hg19:9:34520943-34520961:+] 0.5921 126 0 -12.83 -0.1679 MIMAT0004958 hsa-miR-301b 27019 DNAI1 cgaaacuguuAUAGUAACGUGac || | |||||| auuaccccucUAACUUUGCACaa 3 14 185 207 [hg19:9:34520939-34520961:+] 0.5921 129 0 -8.91 -0.1790

DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G033762 DNAI1 Homo sapiens 27019

DNA & RNA Element - RepTar Gene Name miRNA Begin End Profile DNAI1 ebv-miR-BART4 beg:94 end:113 pic:3' TCGTGTGGTCGTCGTAGTCCAG 5'& ||| || | |||||||| &5' --CACTCCT---G-ATCAGGTC 3' DNAI1 hsa-miR-492 beg:97 end:114 pic:3' TTCTTAGAACAGGGC--GTCCAGGA 5'& |||.| ||||||| &5' ----------TCCTGATCAGGTCC- 3' DNAI1 hsa-miR-1278 beg:32 end:44 pic:3' TATCTACTATACGTGTCATGAT 5'& .|||||||| &5' ------------TACAGTACT- 3' DNAI1 mcv-miR-M1-3p beg:141 end:156 pic:3' AAGTCCTTCTCTTAGGTCGTGT 5'& ||. ||||||| &5' ---------AGGTCCCAGCAC- 3' DNAI1 ebv-miR-BART6-5p beg:67 end:79 pic:3' GGATACCTAACCTGGTTGGAAT 5'& |||.||||| &5' -------------CCAGCCTTA 3' DNAI1 hsa-miR-2113 beg:195 end:210 pic:3' CACTGTCTCGGTTCGTGTTTA 5'& |. |||||||| &5' ---------CTTTGCACAAAT 3' DNAI1 hsa-miR-18b beg:149 end:160 pic:3' GATTGACGTGATCTACGTGGAAT 5'& |||||||| &5' ---------------GCACCTTA 3' DNAI1 hsa-miR-3194 beg:0 end:11 pic:3' GTCGGGAGGACCACCGACCGG 5'& || |||||||| &5' ----------GG-GGCTGGCC 3' DNAI1 hsa-let-7gstar beg:199 end:222 pic:3' CGTTCCGTCACCGGACATGTC 5'& ||| |||||..|| &5' GCACAAATAAA-CCTGTGTAG 3' DNAI1 hsa-miR-1262 beg:71 end:86 pic:3' TAGGAAGATGTTTAAGTGGGTA 5'& |||| |||||| &5' --CCTTAG-------CACCCA- 3' DNAI1 hsa-miR-1264 beg:153 end:172 pic:3' TTGTCCACGAGTTTA-TTCTGAAC 5'& ||.| |.|||||| &5' --------CTTACCCCAGGACTTG 3' DNAI1 hsa-miR-1264 beg:33 end:55 pic:3' TTGTCCACGAGTTTATTCTGAAC 5'& |||| ||| ||.|.|||| &5' -ACAGTA-CTCC--TAGGGCTTG 3' DNAI1 hsa-miR-1284 beg:211 end:223 pic:3' CTTTTCGGTCCCAGACATATCT 5'& ||||.|||| &5' -------------CTGTGTAGA 3' DNAI1 hsa-miR-1294 beg:142 end:161 pic:3' TCTGTTGTTACGGT--TGGAGTGT 5'& ..| ||| ||||.|| &5' -------GGTCCCAGCACCTTAC- 3' DNAI1 hsa-miR-1302 beg:5 end:26 pic:3' AAATCGTATTCAT--ACAGGGTT 5'& |.|| ||| ||||||| &5' --TGGCCTCAGTCTCTGTCCCA- 3' DNAI1 hsa-miR-1321 beg:114 end:132 pic:3' TAGTGTAAGTGGAGGGAC 5'& ||. ||| |||.|.|| &5' --CATCTTC-CCTTCTTG 3' DNAI1 hsa-miR-184 beg:5 end:24 pic:3' TGGGAATAGTCAAGAGGCAGGT 5'& .|| |||| ||||.|||| &5' GCC----TCAG-TCTCTGTCC- 3' DNAI1 hsa-miR-18a beg:99 end:123 pic:3' GATAGACGTGATCTA----CGTGGAAT 5'& ||| |. ||.| |||.||| &5' ----CTG-ATCAGGTCCCAGCATCTT- 3' DNAI1 hsa-miR-1911 beg:79 end:102 pic:3' GGGTTGTCTGTACCGCCATGAGT 5'& ||||.|| ..|| | |||| &5' CCCAGCA--TGTGACCCCACTC- 3' DNAI1 hsa-miR-19a beg:196 end:207 pic:3' AGTCAAAACGTATCTAAACGTGT 5'& |||||||| &5' ---------------TTTGCACA 3' DNAI1 hsa-miR-19b beg:196 end:207 pic:3' AGTCAAAACGTACCTAAACGTGT 5'& |||||||| &5' ---------------TTTGCACA 3' DNAI1 hsa-miR-202 beg:145 end:164 pic:3' AAGGGTACG-GGATATGGAGA 5'& ||||| || ||| |||| | &5' -TCCCA-GCACCT-TACCCC- 3' DNAI1 hsa-miR-3122 beg:135 end:154 pic:3' TTCTGGCAGGAGAA-CAGGGTTG 5'& ||||. ||||||.| &5' -------TCCTTAAGGTCCCAGC 3' DNAI1 hsa-miR-3147 beg:52 end:76 pic:3' AGTGTGGGAGGAGTGA--CGGGTTGG 5'& ||||| .|| |||||.|| &5' ----ACCCTGG-TACCCAGCCCAGCC 3' DNAI1 hsa-miR-3154 beg:106 end:130 pic:3' AGACGAGGGTTG---AGGGGAAGAC 5'& | |||||.| |.||||||| &5' ---GGTCCCAGCATCTTCCCTTCT- 3' DNAI1 hsa-miR-3172 beg:83 end:99 pic:3' ATTCCTGACGTT--TTGGGGT 5'& ||| .|||||| &5' --------GCATGTGACCCCA 3' DNAI1 hsa-miR-3176 beg:55 end:74 pic:3' GGCCATCAGGGTCCGGTCA 5'& |.|||| ||||| |||| &5' CTGGTA--CCCAGCCCAG- 3' DNAI1 hsa-miR-3179 beg:116 end:130 pic:3' TGCAAATTTAAAGTGGGGAAGA 5'& || .||||||| &5' -----------TCTTCCCTTCT 3' DNAI1 hsa-miR-3180-3p beg:4 end:26 pic:3' CCGGAGGCCTTC-GAGGCGGGGT 5'& |||||| || |||.|.|||| &5' GGCCTC----AGTCTCTGTCCCA 3' DNAI1 hsa-miR-3187 beg:62 end:87 pic:3' GG-CGCGTCGGGGTACC-GGTT 5'& || || |||||..| |||. &5' CCAGCCCAGCCTTAGCACCCAG 3' DNAI1 hsa-miR-3202 beg:112 end:130 pic:3' TAATTTCG-AGAAGAGGGAAGGT 5'& ||| ||| |||||||. &5' -----AGCATCT--TCCCTTCT- 3' DNAI1 hsa-miR-320d beg:135 end:154 pic:3' AGGAGAGTT-GGGTCGAAAA 5'& ||||. .. |||||| &5' TCCTTAAGGTCCCAGC---- 3' DNAI1 hsa-miR-320d beg:97 end:118 pic:3' AGGAG-AGTT--GGGTCGAAAA 5'& |||| |||. |||||| &5' TCCTGATCAGGTCCCAGC---- 3' DNAI1 hsa-miR-320e beg:98 end:118 pic:3' GGAAGAGTT--GGGTCGAAA 5'& ||| |||. |||||| &5' CCTGATCAGGTCCCAGC--- 3' DNAI1 hsa-miR-365star beg:96 end:115 pic:3' TGTCGACGGGGACT--TTCAGGGA 5'& |.||||| |.||||| &5' -------CTCCTGATCAGGTCCC- 3' DNAI1 hsa-miR-365star beg:132 end:151 pic:3' TGTCGACGGGGACTTTCAGGGA 5'& |||..||| ||.||||| &5' ----CTGTTCCTTAAGGTCCC- 3' DNAI1 hsa-miR-423-3p beg:0 end:22 pic:3' TGACTCC--CCGGAGTCTGGCTCGA 5'& |.|| |||||||| |. |. &5' ---GGGGCTGGCCTCAGTCTCTGT- 3' DNAI1 hsa-miR-4298 beg:5 end:26 pic:3' GACGGAGGAGGAGGACAGGGTC 5'& ||||| .|| |||||||| &5' --GCCTCAGTCT-CTGTCCCA- 3' DNAI1 hsa-miR-432 beg:93 end:117 pic:3' GGTGGGTTACTGGATGAGGTTCT 5'& ||||.| |||.| . ||| || &5' CCACTCC-TGATCAGGTCCCAG- 3' DNAI1 hsa-miR-769-3p beg:135 end:153 pic:3' TTGGTTCTGGGGCCTCTAGGGTC 5'& .||. ||.|||||| &5' --------TCCTTAAGGTCCCAG 3' DNAI1 hsa-miR-876-3p beg:164 end:186 pic:3' ACTTAATGAAACAT---TTGGTGGT 5'& |||| || |||||||| &5' ------ACTTGGTCTTCAACCACCA 3' DNAI1 hsa-miR-892a beg:24 end:41 pic:3' GATGCGTCTTTCCTGTGTCAC 5'& ||| | |.||||| &5' ---CGCTT---GAATACAGT- 3' DNAI1 hsa-miR-92a-1star beg:58 end:77 pic:3' TCGTAACGTTGGCTAGGGTTGGA 5'& |.| || ||||.||| &5' ------GTACCCAG-CCCAGCCT 3' DNAI1 hsa-miR-92bstar beg:1 end:25 pic:3' GTGACGTGGCG-CAG-GGCAGGGA 5'& .||| .|| ||| |.||||| &5' -GCTG-GCCTCAGTCTCTGTCCC- 3' DNAI1 hsv1-miR-H3 beg:97 end:117 pic:3' CAGGGTTGGCGTGTCAGGGTC 5'& ||| |.| .||||||| &5' -TCCTGATCA---GGTCCCAG 3' DNAI1 kshv-miR-K12-5 beg:104 end:123 pic:3' TGGCCGTTCAAGGTCCGTAGGAT 5'& ||.|| ||| |||||.| &5' -----CAGGTCCCA-GCATCTT- 3' DNAI1 mcv-miR-M1-3p beg:103 end:120 pic:3' AAGTCCTTCTCTTAGGTCGTGT 5'& ||||| ||||||. &5' -TCAGGTC------CCAGCAT- 3' DNAI1 sv40-miR-S1-3p beg:38 end:63 pic:3' TGAG--TCCCGTACTTTGTCCG 5'& |||| ||||| ||| | ||. &5' ACTCCTAGGGCTTGACCCTGGT 3'

DNA & RNA Element - miRcode Gene Name Type microRNA Seed Position Seed Type Total Cons% Tr Region DNAI1 High_conserved miR-503 chr9:34497146 7-mer-A1 58 CDS, 5pUTR DNAI1 High_conserved miR-7/7ab chr9:34488340 7-mer-m8 4 3pUTR, ncRNA DNAI1 High_conserved miR-133abc chr9:34493245 7-mer-A1 47 CDS, 5pUTR, ncRNA DNAI1 High_conserved miR-133abc chr9:34512137 8-mer 16 3pUTR, CDS DNAI1 High_conserved miR-9/9ab chr9:34488305 7-mer-A1 22 3pUTR, ncRNA DNAI1 High_conserved miR-9/9ab chr9:34489400 7-mer-A1 58 CDS, 5pUTR, ncRNA DNAI1 High_conserved miR-9/9ab chr9:34493247 8-mer 49 CDS, 5pUTR, ncRNA DNAI1 High_conserved miR-96/507/1271 chr9:34517464 7-mer-A1 38 3pUTR, CDS, ncRNA DNAI1 High_conserved miR-140/140-5p/876-3p/1244 chr9:34488323 7-mer-m8 13 3pUTR, ncRNA DNAI1 High_conserved miR-142-3p chr9:34489372 7-mer-A1 18 CDS, 5pUTR, ncRNA DNAI1 High_conserved miR-144 chr9:34491433 7-mer-m8 20 ncRNA DNAI1 High_conserved miR-145 chr9:34488461 7-mer-m8 7 3pUTR, ncRNA DNAI1 High_conserved miR-145 chr9:34520712 7-mer-m8 29 3pUTR, CDS DNAI1 High_conserved miR-146ac/146b-5p chr9:34490016 7-mer-A1 40 CDS, 5pUTR, ncRNA DNAI1 High_conserved miR-148ab-3p/152 chr9:34488329 8-mer 16 3pUTR, ncRNA DNAI1 High_conserved miR-150/5127 chr9:34485168 7-mer-A1 47 CDS, 5pUTR, ncRNA DNAI1 High_conserved miR-150/5127 chr9:34493198 7-mer-A1 67 CDS, 5pUTR, ncRNA DNAI1 High_conserved miR-155 chr9:34489428 7-mer-m8 18 CDS, 5pUTR, ncRNA DNAI1 High_conserved miR-15abc/16/16abc/195/322/424/497/1907 chr9:34497146 7-mer-A1 58 CDS, 5pUTR DNAI1 High_conserved miR-15abc/16/16abc/195/322/424/497/1907 chr9:34500746 7-mer-m8 38 3pUTR, CDS, 5pUTR DNAI1 High_conserved miR-15abc/16/16abc/195/322/424/497/1907 chr9:34506659 7-mer-m8 60 3pUTR, CDS, 5pUTR DNAI1 High_conserved miR-15abc/16/16abc/195/322/424/497/1907 chr9:34506662 7-mer-m8 40 3pUTR, CDS, 5pUTR DNAI1 High_conserved miR-182 chr9:34517464 7-mer-A1 38 3pUTR, CDS, ncRNA DNAI1 High_conserved miR-183 chr9:34488508 8-mer 29 3pUTR, ncRNA DNAI1 High_conserved miR-183 chr9:34514612 7-mer-m8 13 ncRNA DNAI1 High_conserved miR-18ab/4735-3p chr9:34520913 8-mer 22 3pUTR DNAI1 High_conserved miR-192/215 chr9:34512111 7-mer-A1 42 3pUTR, CDS, 5pUTR DNAI1 High_conserved miR-19ab chr9:34520960 8-mer 36 3pUTR DNAI1 High_conserved miR-200bc/429/548a chr9:34488194 7-mer-A1 11 3pUTR, ncRNA DNAI1 High_conserved miR-203 chr9:34488749 7-mer-A1 11 3pUTR DNAI1 High_conserved miR-205/205ab chr9:34485075 7-mer-m8 22 ncRNA DNAI1 High_conserved miR-205/205ab chr9:34488018 7-mer-m8 27 CDS, ncRNA DNAI1 High_conserved miR-205/205ab chr9:34489413 8-mer 71 CDS, 5pUTR, ncRNA DNAI1 High_conserved miR-214/761/3619-5p chr9:34500747 7-mer-A1 44 3pUTR, CDS, 5pUTR DNAI1 High_conserved miR-214/761/3619-5p chr9:34500779 7-mer-m8 24 3pUTR, CDS, 5pUTR DNAI1 High_conserved miR-214/761/3619-5p chr9:34520722 7-mer-A1 49 3pUTR, CDS DNAI1 High_conserved miR-216b/216b-5p chr9:34513145 7-mer-m8 20 3pUTR, CDS DNAI1 High_conserved miR-22/22-3p chr9:34490373 7-mer-m8 20 CDS, 5pUTR, ncRNA DNAI1 High_conserved miR-122/122a/1352 chr9:34485113 7-mer-m8 13 ncRNA DNAI1 High_conserved miR-24/24ab/24-3p chr9:34490092 7-mer-m8 9 CDS, 5pUTR, ncRNA DNAI1 High_conserved miR-27abc/27a-3p chr9:34488489 7-mer-m8 13 3pUTR, ncRNA DNAI1 High_conserved miR-27abc/27a-3p chr9:34488659 7-mer-A1 20 3pUTR DNAI1 High_conserved miR-27abc/27a-3p chr9:34514598 7-mer-m8 18 ncRNA DNAI1 High_conserved miR-103a/107/107ab chr9:34500745 7-mer-m8 42 3pUTR, CDS, 5pUTR DNAI1 High_conserved miR-103a/107/107ab chr9:34506658 7-mer-m8 60 3pUTR, CDS, 5pUTR DNAI1 High_conserved miR-338/338-3p chr9:34501137 7-mer-A1 62 3pUTR, CDS, 5pUTR DNAI1 High_conserved miR-34ac/34bc-5p/449abc/449c-5p chr9:34500830 7-mer-m8 9 3pUTR, CDS, 5pUTR DNAI1 High_conserved miR-34ac/34bc-5p/449abc/449c-5p chr9:34513124 7-mer-m8 33 3pUTR, CDS DNAI1 High_conserved miR-375 chr9:34488764 7-mer-A1 13 3pUTR DNAI1 High_conserved miR-383 chr9:34488616 7-mer-A1 22 3pUTR DNAI1 High_conserved miR-383 chr9:34520862 7-mer-A1 22 3pUTR DNAI1 High_conserved miR-425/425-5p/489 chr9:34512162 7-mer-m8 49 3pUTR, CDS DNAI1 High_conserved miR-125a-5p/125b-5p/351/670/4319 chr9:34458827 7-mer-A1 47 5pUTR DNAI1 High_conserved miR-125a-5p/125b-5p/351/670/4319 chr9:34485155 7-mer-A1 44 CDS, 5pUTR, ncRNA DNAI1 High_conserved miR-125a-5p/125b-5p/351/670/4319 chr9:34493288 7-mer-A1 13 CDS, 5pUTR, ncRNA DNAI1 High_conserved miR-455-5p chr9:34488725 7-mer-m8 29 3pUTR DNAI1 High_conserved miR-455-5p chr9:34489331 8-mer 56 CDS, 5pUTR, ncRNA DNAI1 High_conserved miR-455-5p chr9:34517423 7-mer-m8 20 3pUTR, CDS, ncRNA DNAI1 High_conserved miR-128/128ab chr9:34488134 7-mer-m8 13 CDS, ncRNA DNAI1 High_conserved miR-128/128ab chr9:34488488 7-mer-A1 13 3pUTR, ncRNA DNAI1 High_conserved miR-128/128ab chr9:34514461 7-mer-m8 9 3pUTR, CDS, ncRNA DNAI1 High_conserved miR-128/128ab chr9:34514597 8-mer 18 ncRNA DNAI1 High_conserved miR-490-3p chr9:34489381 7-mer-m8 29 CDS, 5pUTR, ncRNA DNAI1 Medium_conserved miR-539/539-5p chr9:34488686 7-mer-A1 13 3pUTR DNAI1 Medium_conserved miR-544/544ab/544-3p chr9:34485103 7-mer-A1 0 ncRNA DNAI1 Medium_conserved miR-544/544ab/544-3p chr9:34520682 7-mer-m8 42 3pUTR, CDS DNAI1 Medium_conserved miR-590-3p chr9:34488743 7-mer-A1 33 3pUTR DNAI1 Medium_conserved miR-653 chr9:34517311 7-mer-A1 69 3pUTR, CDS, ncRNA DNAI1 Medium_conserved miR-134/3118 chr9:34514725 7-mer-m8 49 3pUTR, CDS, ncRNA DNAI1 Medium_conserved miR-873 chr9:34512399 8-mer 18 3pUTR, CDS DNAI1 Medium_conserved miR-873 chr9:34514559 7-mer-m8 13 ncRNA DNAI1 Medium_conserved miR-136 chr9:34487955 7-mer-m8 27 CDS, ncRNA DNAI1 Medium_conserved miR-185/882/3473/4306/4644 chr9:34458994 7-mer-A1 11 5pUTR DNAI1 Medium_conserved miR-186 chr9:34491491 7-mer-A1 16 ncRNA DNAI1 Medium_conserved miR-197 chr9:34488381 7-mer-m8 27 3pUTR, ncRNA DNAI1 Medium_conserved miR-224 chr9:34488384 7-mer-m8 31 3pUTR, ncRNA DNAI1 Medium_conserved miR-224 chr9:34517300 7-mer-A1 13 3pUTR, CDS, ncRNA DNAI1 Medium_conserved miR-296-3p chr9:34490481 7-mer-m8 49 CDS, 5pUTR, ncRNA DNAI1 Medium_conserved miR-299/299-3p/3563-3p chr9:34517291 8-mer 7 3pUTR, CDS, ncRNA DNAI1 Medium_conserved miR-300/381/539-3p chr9:34488864 7-mer-m8 16 3pUTR DNAI1 Medium_conserved miR-320abcd/4429 chr9:34488692 8-mer 27 3pUTR DNAI1 Medium_conserved miR-339b/339-5p/3586-5p chr9:34501153 7-mer-A1 13 3pUTR, CDS, 5pUTR DNAI1 Medium_conserved miR-340-5p chr9:34488695 7-mer-m8 27 3pUTR DNAI1 Medium_conserved miR-370 chr9:34485141 7-mer-A1 27 CDS DNAI1 Medium_conserved miR-370 chr9:34493235 7-mer-A1 44 CDS, 5pUTR, ncRNA DNAI1 Medium_conserved miR-376abd/376b-3p chr9:34493206 7-mer-m8 56 CDS, 5pUTR, ncRNA DNAI1 Medium_conserved miR-376abd/376b-3p chr9:34514659 7-mer-m8 64 3pUTR, CDS, ncRNA DNAI1 Medium_conserved miR-376c/741-5p chr9:34493215 7-mer-A1 22 CDS, 5pUTR, ncRNA DNAI1 Medium_conserved miR-377 chr9:34488413 7-mer-m8 27 3pUTR, ncRNA DNAI1 Medium_conserved miR-377 chr9:34488811 7-mer-m8 27 3pUTR DNAI1 Medium_conserved miR-378/422a/378bcdefhi chr9:34458922 8-mer 16 5pUTR DNAI1 Medium_conserved miR-411 chr9:34488679 7-mer-m8 11 3pUTR DNAI1 Medium_conserved miR-433 chr9:34488074 8-mer 11 CDS, ncRNA DNAI1 Medium_conserved miR-433 chr9:34488252 7-mer-A1 16 3pUTR, ncRNA DNAI1 Medium_conserved miR-433 chr9:34506637 7-mer-A1 64 3pUTR, CDS, 5pUTR DNAI1 Medium_conserved miR-127/127-3p chr9:34457440 7-mer-m8 29 ncRNA DNAI1 Medium_conserved miR-485-5p/1698/1703/1962 chr9:34459044 8-mer 18 CDS, 5pUTR DNAI1 Medium_conserved miR-485-5p/1698/1703/1962 chr9:34485121 7-mer-A1 11 ncRNA DNAI1 Medium_conserved miR-485-5p/1698/1703/1962 chr9:34517433 8-mer 13 3pUTR, CDS, ncRNA DNAI1 Medium_conserved miR-486-5p/3107 chr9:34501152 7-mer-m8 13 3pUTR, CDS, 5pUTR

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score DNAI1 RAID00449392 hsa-miR-589-3p miRNA MIMAT0003256 DNAI1 mRNA 27019 Prediction 0.1828 DNAI1 RAID00556904 hsa-miR-5194 miRNA MIMAT0021125 DNAI1 mRNA 27019 Prediction 0.1828 DNAI1 RAID00915629 hsa-miR-18a-5p miRNA MIMAT0000072 DNAI1 mRNA 27019 Prediction 0.1828 DNAI1 RAID01079996 hsa-miR-527 miRNA MIMAT0002862 DNAI1 mRNA 27019 Prediction 0.1828 DNAI1 RAID01172230 hsa-miR-19a-3p miRNA MIMAT0000073 DNAI1 mRNA 27019 Prediction 0.2202 DNAI1 RAID01241882 hsa-miR-2113 miRNA MIMAT0009206 DNAI1 mRNA 27019 Prediction 0.1828 DNAI1 RAID01264222 hsa-miR-18b-5p miRNA MIMAT0001412 DNAI1 mRNA 27019 Prediction 0.1828 DNAI1 RAID01604570 hsa-miR-301a-3p miRNA MIMAT0000688 DNAI1 mRNA 27019 Prediction 0.1828 DNAI1 RAID01896221 hsa-miR-372-3p miRNA MIMAT0000724 DNAI1 mRNA 27019 Prediction 0.1828 DNAI1 RAID02053594 hsa-miR-301b-3p miRNA MIMAT0004958 DNAI1 mRNA 27019 Prediction 0.1828 DNAI1 RAID02076158 hsa-miR-130b-3p miRNA MIMAT0000691 DNAI1 mRNA 27019 Prediction 0.1828 DNAI1 RAID02413020 hsa-miR-1914-3p miRNA MIMAT0007890 DNAI1 mRNA 27019 Prediction 0.1828 DNAI1 RAID02623428 hsa-miR-6738-5p miRNA MIMAT0027377 DNAI1 mRNA 27019 Prediction 0.1828 DNAI1 RAID02712451 hsa-miR-454-3p miRNA MIMAT0003885 DNAI1 mRNA 27019 Prediction 0.1828 DNAI1 RAID02791014 hsa-miR-19b-3p miRNA MIMAT0000074 DNAI1 mRNA 27019 Prediction 0.2202 DNAI1 RAID02967161 hsa-miR-130a-3p miRNA MIMAT0000425 DNAI1 mRNA 27019 Prediction 0.1828 DNAI1 RAID03023833 hsa-miR-182-5p miRNA MIMAT0000259 DNAI1 mRNA 27019 Prediction 0.1828 DNAI1 RAID03330208 hsa-miR-6852-5p miRNA MIMAT0027604 DNAI1 mRNA 27019 Prediction 0.1828 DNAI1 RAID03446661 hsa-miR-518a-5p miRNA MIMAT0005457 DNAI1 mRNA 27019 Prediction 0.1828 DNAI1 RAID03539247 hsa-miR-4772-5p miRNA MIMAT0019926 DNAI1 mRNA 27019 Prediction 0.1828 DNAI1 RAID03823433 hsa-miR-3649 miRNA MIMAT0018069 DNAI1 mRNA 27019 Prediction 0.1828