SNP - dbSNP |
dbSNP | Type | Alleles | Het | Se(het) | Fxn-class | Gene Name | Assembly | Chr-pos | Sequence | Entrez Gene |
rs12221 | snp | C/T | 0.312083 | 0.242169 | synonymous-codon, downstream-variant-500B | STAM | GRCh38.p7 | 10:17714597 | CCAGGCGCCAGTATA[C/T]AGTCCTCCTCCTGCC | 8027 |
rs723790 | snp | C/T | 0.186421 | 0.24178 | intron-variant | STAM | GRCh38.p7 | 10:17683432 | GCTCACACCTATAAT[C/T]CCAGCATTTTGGGAG | 8027 |
rs723791 | snp | A/C | 0.175254 | 0.238565 | intron-variant | STAM | GRCh38.p7 | 10:17683367 | TGGGACCAGCCTGGG[A/C]AACACTGTGAAACCC | 8027 |
rs723792 | snp | A/G | 0.176861 | 0.239062 | intron-variant | STAM | GRCh38.p7 | 10:17683307 | GCCAGAAATGGTCCC[A/G]GCTCCTATGGGCGCA | 8027 |
rs942775 | snp | C/T | 0.145978 | 0.227331 | intron-variant | STAM | GRCh38.p7 | 10:17709047 | TCTGGCTAATAAATA[C/T]CTGTGGTCAGCGTCA | 8027 |
rs1007264 | snp | A/G | 0.29432 | 0.24604 | intron-variant | STAM | GRCh38.p7 | 10:17668275 | AGTTTTAGGAAAGAG[A/G]GAGAGTGGTTTGGAA | 8027 |
rs1061162 | snp | A/G | 0.136166 | 0.22258 | utr-variant-3-prime | STAM | GRCh38.p7 | 10:17715297 | CTTCAAGAAAACAAA[A/G]TTGTTAGCGTATTTA | 8027 |
rs1359506 | snp | C/G | 0.0244538 | 0.107838 | intron-variant | STAM | GRCh38.p7 | 10:17699188 | TGGAAAGATTAAAAA[C/G]TTTTGTAAAAGAGAA | 8027 |
rs1359507 | snp | A/G | 0.0244538 | 0.107838 | intron-variant | STAM | GRCh38.p7 | 10:17698794 | CTAACAGCTCTTGAC[A/G]CGCAAGTTTGCAACC | 8027 |
rs1801675 | snp | A/T | | | utr-variant-3-prime | STAM | GRCh38.p7 | 10:17715113 | TGTTATGTACATATA[A/T]TGATATGTAACTGCA | 8027 |
rs1937348 | snp | A/G | 0.44858 | 0.151875 | intron-variant | STAM | GRCh38.p7 | 10:17648683 | CTTGCCACTGACTAT[A/G]AGAGATAACAATGAC | 8027 |
rs1937349 | snp | A/T | 0.130008 | 0.219321 | intron-variant | STAM | GRCh38.p7 | 10:17653395 | TTTTGATAAAACAGG[A/T]TAAAAACTCTGAACA | 8027 |
rs1977342 | snp | A/G | 0.296364 | 0.245663 | intron-variant | STAM | GRCh38.p7 | 10:17707175 | tgatccacccgcctc[A/G]gcctcccaacgtgct | 8027 |
rs2001832 | snp | G/T | 0.00517822 | 0.0506191 | intron-variant | STAM | GRCh38.p7 | 10:17675700 | ttcttgttcactact[G/T]tattcctaaagcctt | 8027 |
rs2031514 | snp | A/G | 0.496968 | 0.0388195 | intron-variant | STAM | GRCh38.p7 | 10:17676700 | TTTCGCGAGTGAAAG[A/G]TGGTGTTAACTGGAC | 8027 |
rs2031515 | snp | C/T | 0.12932 | 0.218944 | intron-variant | STAM | GRCh38.p7 | 10:17676495 | TTCCAATGTCTTTTT[C/T]TCAAATCACAGACCA | 8027 |
rs2182158 | snp | C/T | 0.136506 | 0.222754 | intron-variant, upstream-variant-2KB | STAM | GRCh38.p7 | 10:17689273 | ACAGACTGTAATGAG[C/T]GATGTGAAACCATGA | 8027 |
rs2243617 | snp | A/G | 0.346147 | 0.230772 | upstream-variant-2KB, nc-transcript-variant | STAM, STAM-AS1 | GRCh38.p7 | 10:17643728 | GACTTCATCCGAGCA[A/G]GTTTGTCACCTCACG | 8027 |
rs2244877 | snp | A/G | 0.127599 | 0.217986 | intron-variant | STAM | GRCh38.p7 | 10:17654793 | ATATTTTTCAAAAAA[A/G]TCTAGGTCTTGTTGT | 8027 |
rs2244878 | snp | C/G | 0.127599 | 0.217986 | intron-variant | STAM | GRCh38.p7 | 10:17654795 | ATTTTTCAAAAAAGT[C/G]TAGGTCTTGTTGTTT | 8027 |
rs2246058 | snp | C/T | 0.128632 | 0.218563 | intron-variant | STAM | GRCh38.p7 | 10:17677951 | AGTAAAAACTTTTAT[C/T]GGGCAATTTGAACTC | 8027 |
rs2251596 | snp | C/T | 0.473174 | 0.112665 | upstream-variant-2KB, nc-transcript-variant | STAM, STAM-AS1 | GRCh38.p7 | 10:17642399 | TGTACTATGATTTAA[C/T]TGACCAGTGTAAATT | 8027 |
rs2251710 | snp | A/T | 0.3748 | 0.216622 | upstream-variant-2KB, nc-transcript-variant | STAM, STAM-AS1 | GRCh38.p7 | 10:17643342 | ATTATTCTCTGTGTG[A/T]TGGAGAAGTTTTAAG | 8027 |
rs2253965 | snp | C/T | 0.258843 | 0.249844 | intron-variant, upstream-variant-2KB | STAM, LOC105376438 | GRCh38.p7 | 10:17697804 | GCATATCAACCTATA[C/T]ATATAAGCTCTTTAA | 8027 |
rs2255065 | snp | A/G | 0.137187 | 0.223099 | intron-variant | STAM | GRCh38.p7 | 10:17647389 | ggatttcaggacacc[A/G]aactttttctcattt | 8027 |
rs2255153 | snp | A/C | 0.137527 | 0.223271 | intron-variant | STAM | GRCh38.p7 | 10:17647578 | cctgggactgaatcc[A/C]agcagtgtggcccca | 8027 |
rs2255426 | snp | G/T | 0.467337 | 0.123551 | intron-variant | STAM | GRCh38.p7 | 10:17650311 | TGTATAATGGATATT[G/T]CTATCCCTATTTACC | 8027 |
rs2255657 | snp | C/G | 0.47517 | 0.10862 | intron-variant | STAM | GRCh38.p7 | 10:17651913 | TTTCTCAAAATTTAT[C/G]ACTGTCAAAGATCTG | 8027 |
rs2255760 | snp | C/T | 0.475081 | 0.108804 | intron-variant | STAM | GRCh38.p7 | 10:17652606 | ACCTGCCACCTTATT[C/T]AAAAACATAATAGCT | 8027 |
rs2264643 | snp | C/T | 0.00914312 | 0.0669923 | intron-variant | STAM | GRCh38.p7 | 10:17656111 | agagacgggtttcac[C/T]gtgttagccaggatg | 8027 |
rs2272143 | snp | A/T | 0.142358 | 0.22564 | intron-variant | STAM | GRCh38.p7 | 10:17709003 | TGTTACAGCTGTTTA[A/T]GTGCCCCCAGTTATC | 8027 |
rs2272146 | snp | C/T | 0.185788 | 0.241613 | intron-variant | STAM, LOC105376438 | GRCh38.p7 | 10:17696485 | ATTGTCAGCTTCAGA[C/T]GGTTCACAGGCTCCA | 8027 |
rs2280583 | snp | C/T | 0.0693013 | 0.172766 | upstream-variant-2KB, nc-transcript-variant | STAM, STAM-AS1 | GRCh38.p7 | 10:17643818 | GGGAATACAAGGTTA[C/T]GATAACCGAGAGAGC | 8027 |
rs2357291 | snp | A/G | 0.173643 | 0.238054 | intron-variant | STAM | GRCh38.p7 | 10:17662373 | ATCCTTTCAGACCCA[A/G]TGTAGATACCACTTC | 8027 |
rs2357292 | snp | A/T | 0.472989 | 0.113031 | intron-variant | STAM | GRCh38.p7 | 10:17662634 | TACTCTAGAGGGAGA[A/T]TGCCTGGGTTCAAAT | 8027 |
rs2357293 | snp | C/T | 0.0287284 | 0.116357 | intron-variant | STAM | GRCh38.p7 | 10:17662889 | CTGTTGAAGACTGGG[C/T]ACCAAGCTAGACCAC | 8027 |
rs2357294 | snp | G/T | | | intron-variant | STAM | GRCh38.p7 | 10:17669905 | ttttttttttttttg[G/T]atttttagtagacac | 8027 |
rs2461890 | snp | C/T | 0.46754 | 0.123192 | intron-variant | STAM | GRCh38.p7 | 10:17649636 | AATGTTCTAGAAAAA[C/T]ACCAATAATTCATTA | 8027 |
rs2570276 | snp | A/C | 0.090703 | 0.192677 | | | GRCh38.p7 | 10:17702220 | ATCATTACCTTATAC[A/C]TATGAATGAATCTAA | 8027 |
rs2570277 | snp | A/G | 0.34101 | 0.232846 | | | GRCh38.p7 | 10:17709798 | TCCTCAAAGAGTTAC[A/G]TGTTAGAGATGCTTG | 8027 |
rs2570278 | snp | C/T | 0.48679 | 0.0801892 | | | GRCh38.p7 | 10:17712538 | CCAAGTACAAGAGCA[C/T]TGAATTTCCCAACAA | 8027 |
rs2570284 | snp | C/T | 0.488424 | 0.0751925 | | | GRCh38.p7 | 10:17674872 | TTAGAATTATTTTTT[C/T]CTAATGGTATTTTTC | 8027 |
rs2570285 | snp | C/G | 0.138886 | 0.22395 | | | GRCh38.p7 | 10:17678337 | aacctgggaggtgca[C/G]gttacagtgaactga | 8027 |
rs2570286 | snp | A/C | 0.130008 | 0.219321 | | | GRCh38.p7 | 10:17683712 | ttccagcatgcttat[A/C]atagcttatataaag | 8027 |
rs2570287 | snp | A/G | 0.492287 | 0.0616198 | | | GRCh38.p7 | 10:17684071 | GGCCTCATCTCTGAC[A/G]ACTGTGTGAGCGTTG | 8027 |
rs2570288 | snp | A/C | 0.130351 | 0.219509 | | | GRCh38.p7 | 10:17686518 | AGTAGCTGGGAATAC[A/C]GGCATGCGCCACCAC | 8027 |
rs2570289 | snp | A/G | 0.130694 | 0.219696 | | | GRCh38.p7 | 10:17695869 | tccatttgggctgcc[A/G]taacaaactaccgta | 8027 |
rs2688786 | snp | C/T | 0.360632 | 0.224189 | intron-variant | STAM | GRCh38.p7 | 10:17706173 | CAAGTAAAAAAATTC[C/T]GTTAAACTTTATTTT | 8027 |
rs2688787 | snp | C/T | 0.240478 | 0.249819 | intron-variant | STAM | GRCh38.p7 | 10:17703997 | CCTCTTATGTCATGC[C/T]AGAGGATTTTGCTTT | 8027 |
rs2688788 | snp | C/T | 0.492188 | 0.0620098 | intron-variant | STAM | GRCh38.p7 | 10:17692247 | TTAAACAAGGTACTG[C/T]GATATGAGTGGTTAA | 8027 |
rs2688789 | snp | C/T | 0.485255 | 0.0845871 | intron-variant | STAM | GRCh38.p7 | 10:17691015 | AACTTCACAATTAGA[C/T]AGATTTGAACTTTTA | 8027 |
rs2688790 | snp | A/G | 0.489434 | 0.0719116 | intron-variant | STAM | GRCh38.p7 | 10:17683856 | AATATAAAATTCAAA[A/G]TACTAAGCATTCAAT | 8027 |
rs2688791 | snp | C/T | 0.425123 | 0.178415 | intron-variant | STAM | GRCh38.p7 | 10:17708636 | GTTTTTCAAAATGCC[C/T]GTTGACAGAAATAAC | 8027 |
rs2688797 | snp | G/T | 0.128976 | 0.218754 | intron-variant | STAM | GRCh38.p7 | 10:17670809 | AATTATTCCCTTAAT[G/T]TTAAGCTTATTAAGT | 8027 |
rs2764800 | snp | A/T | 0 | 0 | intron-variant | STAM | GRCh38.p7 | 10:17686514 | CCTGAGTAGCTGGGA[A/T]TACAGGCATGCGCCA | 8027 |
rs2764801 | snp | C/T | 0.000399281 | 0.0141238 | intron-variant, upstream-variant-2KB | STAM | GRCh38.p7 | 10:17689470 | GAAGCAAAGGACATT[C/T]TTCTTCTTAAAAAAA | 8027 |
rs2764804 | snp | A/G | 0.401747 | 0.198678 | intron-variant | STAM | GRCh38.p7 | 10:17712813 | TTCTTTCTTTTTTTA[A/G]TGGGAGCAGTGCACA | 8027 |
rs2764805 | snp | A/C | 0.459574 | 0.136304 | utr-variant-3-prime, downstream-variant-500B | STAM | GRCh38.p7 | 10:17715961 | TATTGTTTTCTTTCA[A/C]ACTGGATTTTTGGGT | 8027 |
rs3780960 | snp | A/G | 0.333722 | 0.235565 | intron-variant, upstream-variant-2KB | STAM, STAM-AS1 | GRCh38.p7 | 10:17645554 | ATATTATTTAACTGC[A/G]GAATGGAATGATGTG | 8027 |
rs3813860 | snp | C/G | 0.0912534 | 0.193131 | intron-variant | STAM | GRCh38.p7 | 10:17694586 | TAGGTTGAGTCTTTA[C/G]ACTGGTAAGAATTAC | 8027 |
rs3813861 | snp | C/G | 0.0023933 | 0.0345097 | intron-variant | STAM | GRCh38.p7 | 10:17694841 | AGTTTTCATGCTGTT[C/G]CAATTTTGTTAATTT | 8027 |
rs3824629 | snp | G/T | 0.0930568 | 0.194599 | intron-variant | STAM | GRCh38.p7 | 10:17704612 | TGAGAAATGTTCCAT[G/T]TTTAATATTATCCTC | 8027 |
rs3830598 | in-del | -/A | | | intron-variant | STAM | GRCh38.p7 | 10:17684423 | GTAGGAAAAAAAAAA[-/A]GGTTTGAAAATAAAA | 8027 |
rs3832661 | in-del | -/G/GG | | | utr-variant-3-prime, downstream-variant-500B | STAM | GRCh38.p7 | 10:17714959 | CAGGGGCGGGGGGGG[-/G/GG]AAGAACCTCTAAAAA | 8027 |
rs4281393 | snp | C/G | 0 | 0 | intron-variant | STAM | GRCh38.p7 | 10:17678850 | aatttgtctattcta[C/G]atacctcatggaagt | 8027 |
rs4400696 | snp | A/G | 0.466721 | 0.124627 | intron-variant | STAM | GRCh38.p7 | 10:17669438 | TTTCAAATTGAGTTG[A/G]CTGGGTTAAAAACAA | 8027 |
rs4551659 | snp | C/T | 0.304438 | 0.244001 | intron-variant | STAM | GRCh38.p7 | 10:17704769 | GCACTTTAAGATTTT[C/T]AGATTAATATTTTAG | 8027 |
rs4556434 | snp | A/G | 0.474272 | 0.110462 | intron-variant | STAM | GRCh38.p7 | 10:17703125 | AATTTTAAATATTGT[A/G]TAGTATTCTGTAAGC | 8027 |
rs4589180 | snp | A/G | 0 | 0 | intron-variant | STAM | GRCh38.p7 | 10:17648426 | aagctgggcacccta[A/G]ccagcagcAgcaacc | 8027 |
rs4747317 | snp | A/G | 0.158962 | 0.232835 | intron-variant | STAM | GRCh38.p7 | 10:17655052 | CTCTTCTTATTTTCT[A/G]AATACATCGGGAAGC | 8027 |
rs4747318 | snp | C/T | 0.123452 | 0.215605 | intron-variant | STAM | GRCh38.p7 | 10:17655342 | TTGTATTAATTCTTA[C/T]GCAAGGAATTAATCT | 8027 |
rs4747319 | snp | A/G | 0.17461 | 0.238362 | intron-variant | STAM | GRCh38.p7 | 10:17658859 | acaacatacagttgt[A/G]tgttgttttttgatt | 8027 |
rs4747320 | snp | C/G | 0.164546 | 0.234942 | intron-variant | STAM | GRCh38.p7 | 10:17666479 | ggctcactgcaagct[C/G]cgcctgccgggttca | 8027 |
rs4747321 | snp | C/T | 0.0905309 | 0.192535 | intron-variant | STAM | GRCh38.p7 | 10:17674879 | ACCATTAGGAAAAAA[C/T]AATTCTAATAAACAA | 8027 |
rs4748393 | snp | A/T | 0.163236 | 0.234461 | intron-variant | STAM | GRCh38.p7 | 10:17646511 | ATACTCCTTAATGAG[A/T]GGTTGCTACATAGGA | 8027 |
rs4748394 | snp | A/G | 0.16976 | 0.236773 | intron-variant | STAM | GRCh38.p7 | 10:17653718 | ttaggcatgataagt[A/G]atctagagaaattaa | 8027 |
rs4748395 | snp | G/T | 0.137187 | 0.223099 | intron-variant | STAM | GRCh38.p7 | 10:17655348 | TAATTCTTATGCAAG[G/T]AATTAATCTGTGTGA | 8027 |
rs4748396 | snp | A/G | 0.161596 | 0.233848 | intron-variant | STAM | GRCh38.p7 | 10:17659265 | cttcccatcccttgc[A/G]tcattgctgtcattc | 8027 |
rs4748397 | snp | A/G | 0.157311 | 0.232183 | intron-variant | STAM | GRCh38.p7 | 10:17670298 | GACTTATAGAATTCT[A/G]ATGACTGTTGTGctt | 8027 |
rs4748398 | snp | C/T | 0.151668 | 0.229849 | intron-variant, upstream-variant-2KB | STAM | GRCh38.p7 | 10:17688417 | CTACTTCTTTATAAA[C/T]GAATTGGTTTAACAT | 8027 |
rs4748399 | snp | C/T | 0.136506 | 0.222754 | intron-variant, upstream-variant-2KB | STAM | GRCh38.p7 | 10:17689391 | GCTTTCTTCCCAAGG[C/T]ATTTCCAGTTTATCT | 8027 |
rs4748400 | snp | C/G | 0.140919 | 0.224948 | intron-variant | STAM | GRCh38.p7 | 10:17692361 | ACTGACTGATGTGTT[C/G]AAACTCAAAAGGGAA | 8027 |
rs4748401 | snp | A/G | 0.184521 | 0.241273 | intron-variant | STAM | GRCh38.p7 | 10:17694875 | TTTAAACTTTCAGTT[A/G]TGAATGAATGAATAA | 8027 |
rs4748402 | snp | C/T | 0.139225 | 0.224118 | intron-variant, nc-transcript-variant | STAM, LOC105376438 | GRCh38.p7 | 10:17696627 | GGCTTCTTCTTCTTT[C/T]GTAATAAAGGAAGAT | 8027 |
rs4748403 | snp | A/T | 0.114738 | 0.210248 | intron-variant | STAM | GRCh38.p7 | 10:17703589 | TTTTTTAAAAAACAT[A/T]AATACATATATACTT | 8027 |
rs4748404 | snp | A/C | 0.114738 | 0.210248 | intron-variant | STAM | GRCh38.p7 | 10:17703594 | TAAAAAACATAAATA[A/C]ATATATACTTATATA | 8027 |
rs4748405 | snp | C/G | 0.139723 | 0.224364 | intron-variant | STAM | GRCh38.p7 | 10:17705054 | GTGCATTTATGTTGT[C/G]TACCTTCTTTCCTGA | 8027 |
rs4748406 | snp | A/G | 0.115088 | 0.210473 | intron-variant | STAM | GRCh38.p7 | 10:17705276 | AAACAAGGGCTAGCT[A/G]TGTAATTCTCTTTGC | 8027 |
rs4748407 | snp | C/G | 0.183886 | 0.241099 | intron-variant | STAM | GRCh38.p7 | 10:17711159 | TCAGTTTATATATAT[C/G]TGAGAGGCTATCTCT | 8027 |
rs4748408 | snp | C/T | 0.114738 | 0.210248 | intron-variant | STAM | GRCh38.p7 | 10:17711294 | TAAAGCTACCTGTAG[C/T]GATGGTAGTATTATA | 8027 |
rs5783557 | in-del | -/T | 0.146314 | 0.227484 | intron-variant | STAM | GRCh38.p7 | 10:17675799 | TTGGTACCTATTGAA[-/T]TTTTTTTTTAACAGT | 8027 |
rs6602207 | snp | C/T | 0.462144 | 0.132269 | intron-variant | STAM | GRCh38.p7 | 10:17656879 | agaaatccaagtggg[C/T]gacttgaagagtaag | 8027 |
rs7070105 | snp | A/T | 0.32885 | 0.23724 | intron-variant | STAM | GRCh38.p7 | 10:17650917 | AAAAATACAAAAAAT[A/T]AGCCGGGCGTAGTGG | 8027 |
rs7070402 | snp | A/G | 0.16976 | 0.236773 | intron-variant | STAM | GRCh38.p7 | 10:17654105 | aagtctttgctgact[A/G]ggtagttagcatcag | 8027 |
rs7072026 | snp | C/G | 0.00478085 | 0.0486577 | intron-variant | STAM | GRCh38.p7 | 10:17648010 | tccttgcccttctca[C/G]tagacgacaacatga | 8027 |
rs7073509 | snp | A/G | | | intron-variant | STAM | GRCh38.p7 | 10:17660214 | ATATAATTTTTTTAT[A/G]AAGAAAAATCAATGC | 8027 |
rs7073595 | snp | C/T | 0.172674 | 0.237741 | intron-variant | STAM | GRCh38.p7 | 10:17657056 | cccatcggaggcttt[C/T]ttcccttttctggtg | 8027 |
rs7075270 | snp | A/C | 0.126219 | 0.217206 | intron-variant, missense | STAM | GRCh38.p7 | 10:17713291 | ccaggggacctcatg[A/C]agcccggtgattctg | 8027 |
rs7076184 | snp | A/T | 0.00835141 | 0.0640778 | intron-variant | STAM | GRCh38.p7 | 10:17704697 | TGAATTCTTATAATT[A/T]TCTATCCAAACGAAG | 8027 |
rs7076634 | snp | C/T | 0.145305 | 0.227022 | intron-variant | STAM | GRCh38.p7 | 10:17673293 | ATGTTTTCCACTTAG[C/T]GAACTCAGTGGAAGA | 8027 |