DNA & RNA Element - RepTar |
Gene Name | miRNA | Begin | End | Profile |
WDR38 | hsa-miR-4252 | beg:31 | end:49 | pic:3' ACCACGACT-GAGTCACCGG 5'& ||| ||||||||| &5' ----GCTCCCCTCAGTGGC- 3' |
WDR38 | ebv-miR-BART17-3p | beg:37 | end:61 | pic:3' TGATTCCCCTGTG-GTCCGTATGT 5'& || || || |.| |||||||.| &5' -CTCAGTGG-CGCACAGGCATGC- 3' |
WDR38 | ebv-miR-BART19-3p | beg:227 | end:249 | pic:3' TCGTAAGGGTTCGTTTGTTTT 5'& .| | |||.| |||||||. &5' GGAAGTGCCAGG-AAACAAAG 3' |
WDR38 | ebv-miR-BART5star | beg:150 | end:171 | pic:3' TCCACTTGTCGC-CGGGTG 5'& ||||..||| ||. | &5' -GGTGGGCAGGACGCTTGC 3' |
WDR38 | ebv-miR-BART6-3p | beg:91 | end:112 | pic:3' AGATTCCGATCAGG----CTAGGGGC 5'& ||| ||| ||||||| &5' -----GGCA--TCCAGCAGATCCCC- 3' |
WDR38 | ebv-miR-BART6-3p | beg:185 | end:197 | pic:3' AGATTCCGATCAGGCTAGGGGC 5'& |.|.||||| &5' ------------CTGGTCCCC- 3' |
WDR38 | hsa-miR-632 | beg:129 | end:148 | pic:3' AGGGTGTCCTTCGTCTGTG 5'& ||||| .|||||||| &5' -CCCACCA-GAGCAGACA- 3' |
WDR38 | hsa-miR-23bstar | beg:162 | end:179 | pic:3' TTTAGTCGTACGGTCCTTGGGT 5'& || |||. |||||||| &5' ------GCTTGCT-GGAACCCA 3' |
WDR38 | hsa-miR-3144-5p | beg:186 | end:197 | pic:3' GATATATAGAGAAACCAGGGGA 5'& |||||||| &5' -------------TGGTCCCC- 3' |
WDR38 | kshv-miR-K12-7star | beg:33 | end:51 | pic:3' GTATTTAGGGGCAGGCCACCGCGA 5'& ||||| || ||||||| &5' ------TCCCC-TCA-GTGGCGC- 3' |
WDR38 | hcmv-miR-US33-3p | beg:75 | end:91 | pic:3' ACCTACACGAG-C-CTGGCACT 5'& || | |||.||| &5' -------GCAAAGTGACTGTG- 3' |
WDR38 | hsa-miR-1182 | beg:104 | end:127 | pic:3' CAGTGTAGGGAG---GGTTCTGGGAG 5'& ||||| |||.|||.||| &5' -----ATCCCCATGGCCAGGACTCTC 3' |
WDR38 | hsa-miR-1204 | beg:224 | end:246 | pic:3' TATTACC-TC-TGGTCCGGTGCT 5'& |.||| || .||||| || &5' --AGTGGAAGTGCCAGGAAAC-- 3' |
WDR38 | hsa-miR-1231 | beg:167 | end:188 | pic:3' CGTCGACA---GGCGGGTCTGTG 5'& |||| || .||||||| &5' ---GCTGGAACCCA-TCAGACAC 3' |
WDR38 | hsa-miR-1262 | beg:199 | end:213 | pic:3' TAGGAAGATGTTTAAGTGGGTA 5'& ||.| |||||| &5' ---------CAGACCCACCCA- 3' |
WDR38 | hsa-miR-1263 | beg:37 | end:62 | pic:3' TGAGTCATA-CG-GTCCC-ATGGTA 5'& ||||||. || |||| |.|| &5' -CTCAGTGGCGCACAGGCATGCC-- 3' |
WDR38 | hsa-miR-1271 | beg:225 | end:242 | pic:3' ACTCACGAACGATC-CACGGTTC 5'& |. ||||||.| &5' ---------GTGGAAGTGCCAGG 3' |
WDR38 | hsa-miR-1293 | beg:198 | end:214 | pic:3' CGTGTTTAGAGGTCT-GGTGGGT 5'& ||||| ||||||| &5' ----------CCAGACCCACCCA 3' |
WDR38 | hsa-miR-1294 | beg:12 | end:32 | pic:3' TCTGTTGTTACGGTTGGAGTGT 5'& .| .||||.||||||| &5' ----GATGGTGCCGACCTCAC- 3' |
WDR38 | hsa-miR-1306 | beg:130 | end:147 | pic:3' GTGGTGGTCTCGGTTGCA 5'& |||||||||| .|| &5' --CCACCAGAGCAGAC-- 3' |
WDR38 | hsa-miR-1322 | beg:91 | end:109 | pic:3' GTCGTA-GTCGTCGTAGTAG 5'& .|||| |||||| ||| &5' -GGCATCCAGCAG-ATC--- 3' |
WDR38 | hsa-miR-139-5p | beg:138 | end:155 | pic:3' GACCTCTGTGCACGTGACATCT 5'& | ||||| |||||.| &5' --GCAGACA-----ACTGTGG- 3' |
WDR38 | hsa-miR-181a-2star | beg:38 | end:48 | pic:3' CCATGTCAGTTGCCAGTCACCA 5'& ||||||| &5' --------------TCAGTGG- 3' |
WDR38 | hsa-miR-182star | beg:157 | end:178 | pic:3' ATCAACCGTTCAGATCTTGGT 5'& || || | ||.||||| &5' -AGGACGCTTG-CTGGAACC- 3' |
WDR38 | hsa-miR-1910 | beg:150 | end:174 | pic:3' TCCG-CCGTCC-GTGTCCTGACC 5'& ||. |||||| |.| .|||| &5' -GGTGGGCAGGACGCTT-GCTGG 3' |
WDR38 | hsa-miR-193a-5p | beg:190 | end:210 | pic:3' AGTAGAGCGGGCGTT----TCTGGGT 5'& |.|| ||| ||||||| &5' -------GTCCCCAAAACCAGACCCA 3' |
WDR38 | hsa-miR-2110 | beg:97 | end:113 | pic:3' GTGAGTCGCCGGCAAAGGGGTT 5'& |||| | |||||| &5' ----CAGCAGA----TCCCCA- 3' |
WDR38 | hsa-miR-2110 | beg:56 | end:73 | pic:3' GTGAGTCGCCGGC-AA-AGGGGTT 5'& |||| || |||||| &5' ---------GCCGCTTCTCCCCA- 3' |
WDR38 | hsa-miR-214 | beg:155 | end:173 | pic:3' TGACGGACAGACACGGACGACA 5'& || | ||.||||| &5' ---GCAGGAC---GCTTGCTG- 3' |
WDR38 | hsa-miR-214star | beg:40 | end:58 | pic:3' CGTGTCGTTCACATC-TGTCCGT 5'& |||| | ||||||| &5' --------AGTGGCGCACAGGCA 3' |
WDR38 | hsa-miR-221 | beg:169 | end:193 | pic:3' CTTTGGGTCGTCTGTTACATCGA 5'& |.|||||| |||||| |.|. &5' GGAACCCATCAGACACC-TGGT- 3' |
WDR38 | hsa-miR-2861 | beg:204 | end:223 | pic:3' GGCGGGTGGCGGTCCGGGG 5'& || |||||| ||| ||| &5' CCACCCACCTCCA--CCC- 3' |
WDR38 | hsa-miR-2861 | beg:112 | end:135 | pic:3' GGCGGG--TG-GCGGTCCGGGG 5'& ||| || | ||||||||| &5' --GCCAGGACTCTCCAGGCCCC 3' |
WDR38 | hsa-miR-29b-1star | beg:185 | end:205 | pic:3' AGATTTGGTGGTATACTTTGGTCG 5'& ||.. || ||| ||||||| &5' -CTGGTCC-CCA----AAACCAG- 3' |
WDR38 | hsa-miR-3150 | beg:53 | end:72 | pic:3' GGT-TGGAGCTCCTAGAGGGGTC 5'& || .|| |||||||| &5' -CATGCCGCT----TCTCCCCA- 3' |
WDR38 | hsa-miR-3151 | beg:117 | end:138 | pic:3' TGGACT-AGGGTAACGGGGTGG 5'& || ||.| |||||||| &5' ----GACTCTCCAGGCCCCACC 3' |
WDR38 | hsa-miR-3175 | beg:52 | end:72 | pic:3' TGCAGTG-ACGCAAGAGAGGGGC 5'& .| ||| .||||||| &5' -----GCATGCCGCTTCTCCCC- 3' |
WDR38 | hsa-miR-3189 | beg:63 | end:82 | pic:3' GATGGGGTAGTCTGGGTTCCC 5'& || ||||| ||||| ||| &5' CT-CCCCA-CAGACGCAA--- 3' |
WDR38 | hsa-miR-3191 | beg:182 | end:198 | pic:3' GACAGACCGGTCGATGCAGGGGT 5'& || ||. ||||||| &5' ---------CACCTG-GTCCCCA 3' |
WDR38 | hsa-miR-4254 | beg:110 | end:132 | pic:3' CTCTACCA--CCTCATCGAGGTCCG 5'& |||| ||| |||||||| &5' ---ATGGCCAGGACT--CTCCAGGC 3' |
WDR38 | hsa-miR-4296 | beg:59 | end:74 | pic:3' ACTCGGACTCGGGTGTA 5'& ||.| |||||| &5' ---GCTTCTCCCCACA- 3' |
WDR38 | hsa-miR-4312 | beg:149 | end:172 | pic:3' ACC-CCTGTCCT-TGTTCCGG 5'& ||| ||.||||| .| ||. &5' TGGTGGGCAGGACGCTT-GCT 3' |
WDR38 | hsa-miR-571 | beg:5 | end:31 | pic:3' GAGT-GAGTCTAC--CGGTT-GAGT 5'& || ||.||||| |||.| |||| &5' --CACCTTAGATGGTGCCGACCTCA 3' |
WDR38 | hsa-miR-582-5p | beg:141 | end:153 | pic:3' TCATTGACCAACTTGTTGACATT 5'& .||||||||. &5' ------------GACAACTGTG- 3' |
WDR38 | hsa-miR-593star | beg:7 | end:24 | pic:3' CGACTCGTTACGGACCG-ACCACGGA 5'& ||| ||||||| &5' -----------CCTTAGATGGTGCC- 3' |
WDR38 | hsa-miR-597 | beg:36 | end:52 | pic:3' TGTCACCAGTAGCTCACTGTGT 5'& | || ||||.|.|| &5' --------CCTC-AGTGGCGCA 3' |
WDR38 | hsa-miR-616 | beg:31 | end:49 | pic:3' GACGAGTTTGGGAGGTTACTGA 5'& |||| |||| ||.||.| &5' --GCTC---CCCT-CAGTGGC- 3' |
WDR38 | hsa-miR-629 | beg:189 | end:210 | pic:3' TCAAGAGGGTTGCA-TTTGGGT 5'& || ||||| |.||||| &5' ---TC-CCCAAAACCAGACCCA 3' |
WDR38 | hsa-miR-664star | beg:97 | end:120 | pic:3' TAGGTTAGTAAAAGGG--ATCGGTCA 5'& ||||. || |||| |.||||| &5' -TCCAG-CAGA-TCCCCATGGCCAG- 3' |
WDR38 | hsa-miR-668 | beg:148 | end:174 | pic:3' CATCACCCGG-CT-CGGCTCACTGT 5'& ||.|||||| || ||. . ||. &5' GTGGTGGGCAGGACGCTTGCTGG-- 3' |
WDR38 | hsa-miR-760 | beg:64 | end:85 | pic:3' AGGGGTGTCTGGGTCTCGGC 5'& ||||||||||| || ||. &5' TCCCCACAGACGCAAAGT-- 3' |
WDR38 | hsa-miR-767-3p | beg:144 | end:163 | pic:3' TCTTTGGTACCCCATACTCGTCT 5'& |||..||| ||.||||. &5' ---AACTGTGG----TGGGCAGG 3' |
WDR38 | hsa-miR-875-3p | beg:30 | end:56 | pic:3' GTGTT-GGAGTCACAAAG-GTCC 5'& |.| |||||||| | |||| &5' CGCTCCCCTCAGTGGCGCACAGG 3' |
WDR38 | hsa-miR-886-3p | beg:26 | end:36 | pic:3' TTCCCAGTCATTCGTGGGCGC 5'& ||||||| &5' -------------CACCCGC- 3' |
WDR38 | hsa-miR-939 | beg:21 | end:41 | pic:3' GTGGGGGTCTCGGAGT---CGAGGGGT 5'& || || ||||| ||||||| &5' -----CC-GA-CCTCACCCGCTCCCC- 3' |
WDR38 | hsa-miR-939 | beg:56 | end:72 | pic:3' GTGGGGGTCTCGGAGTCGAGGGGT 5'& ||| | ||||||| &5' ----------GCCGCTTCTCCCCA 3' |
WDR38 | hsa-miR-96 | beg:225 | end:240 | pic:3' TCGTTTTTACACGATCACGGTTT 5'& ||| |||||||. &5' ---------GTGGAAGTGCCAG- 3' |
WDR38 | hsv2-miR-H20 | beg:187 | end:206 | pic:3' TCTTTCCCCAGGCA--TTGGTTT 5'& ||||| |||||.| &5' -------GGTCCCCAAAACCAGA 3' |
WDR38 | hsv2-miR-H22 | beg:203 | end:223 | pic:3' CGGGTGGGTGCAGGTCTGGGGA 5'& ||||||||| ||| |||| &5' -CCCACCCACCTCC--ACCC-- 3' |
WDR38 | hsv2-miR-H22 | beg:112 | end:135 | pic:3' CGGG--TGGGTGCAGGTCTGGGGA 5'& ||| ||.| |||||.|||| &5' GCCAGGACTC---TCCAGGCCCC- 3' |
WDR38 | hsv2-miR-H23 | beg:88 | end:118 | pic:3' CGACCGT---TCGA-----GGTGCCGGA 5'& ||||||| ||| |||.|||| &5' GCTGGCATCCAGCAGATCCCCATGGCC- 3' |
WDR38 | kshv-miR-K12-10astar | beg:116 | end:133 | pic:3' TCACCACCATAGCGGGGTTCGG 5'& || | |.|||.||| &5' ------GGA--CTCTCCAGGCC 3' |
WDR38 | kshv-miR-K12-3star | beg:74 | end:91 | pic:3' ACAGTGTAAGACACTGGCGCT 5'& |.|| |||||.|.| &5' ---CGCAAA--GTGACTGTG- 3' |
WDR38 | kshv-miR-K12-5 | beg:88 | end:110 | pic:3' TGGCCGTTCAAGGTCCG-TAGGAT 5'& .|.|||| ||||| |||| &5' GCTGGCA---TCCAGCAGATCC-- 3' |
WDR38 | sv40-miR-S1-5p | beg:24 | end:44 | pic:3' TTCCGAGTAAAGTCCGGGGAGT 5'& |||| |. ||||||| &5' ----CTCACC-CGCTCCCCTCA 3' |