SNP - dbSNP |
dbSNP | Type | Alleles | Het | Se(het) | Fxn-class | Gene Name | Assembly | Chr-pos | Sequence | Entrez Gene |
rs1620 | snp | A/G | 0.0318976 | 0.122194 | intron-variant | FCHSD2 | GRCh38.p7 | 11:73009815 | catgctttttttctt[A/G]ctgttttttgaattc | 9873 |
rs152997 | snp | A/G | 0.0988009 | 0.199095 | intron-variant | FCHSD2 | GRCh38.p7 | 11:72909380 | ggtggaggttgtagc[A/G]agccgagatcacgcc | 9873 |
rs429574 | snp | A/G/T | 0 | 0 | intron-variant | FCHSD2 | GRCh38.p7 | 11:72909351 | GCTCAATGTTGCCCA[A/G/T]GCTGGAGTGCAGTGG | 9873 |
rs479093 | snp | C/T | 0.00755907 | 0.0610114 | intron-variant | FCHSD2 | GRCh38.p7 | 11:72974529 | AGCACTgctgttcaa[C/T]agagttttctaagat | 9873 |
rs493315 | snp | A/G | 0.00119737 | 0.0244387 | intron-variant | FCHSD2 | GRCh38.p7 | 11:72970906 | AAGGCAATACCAAGA[A/G]GCCAAGTGCAGAAGC | 9873 |
rs494413 | snp | C/T | 0.00914312 | 0.0669923 | intron-variant | FCHSD2 | GRCh38.p7 | 11:72977628 | ctgccgaagcgagca[C/T]GCtctcacaccagtt | 9873 |
rs508532 | snp | A/C | 0.00159617 | 0.0282053 | intron-variant | FCHSD2 | GRCh38.p7 | 11:72981137 | TACTGTACATTAACT[A/C]ATTTTCTTCCTCATG | 9873 |
rs509597 | snp | C/G | 0.00676609 | 0.0577691 | intron-variant | FCHSD2 | GRCh38.p7 | 11:72975511 | taggagagaagattt[C/G]gaaatgttctcaaca | 9873 |
rs537980 | snp | C/T | 0.00716266 | 0.059414 | intron-variant | FCHSD2 | GRCh38.p7 | 11:72980199 | CCCCCTCTTCAAACC[C/T]CAAACTTACCCCTTC | 9873 |
rs555773 | snp | A/G | 0.0988009 | 0.199095 | intron-variant | FCHSD2 | GRCh38.p7 | 11:72973166 | TGAGGTCAGGAGTTC[A/G]AGACCAGCCTGACCA | 9873 |
rs560258 | snp | A/G | 0.00716266 | 0.059414 | intron-variant | FCHSD2 | GRCh38.p7 | 11:72973637 | GGGGTCACCTGGGAG[A/G]TTTCCACTGTACTGA | 9873 |
rs573529 | snp | G/T | 0.137187 | 0.223099 | intron-variant | FCHSD2 | GRCh38.p7 | 11:72976504 | aggctggtctcaaac[G/T]cttggactcaagtga | 9873 |
rs593301 | snp | C/T | 0.00676609 | 0.0577691 | intron-variant | FCHSD2 | GRCh38.p7 | 11:72980296 | AAGCAGTGTTGAAAC[C/T]GCTGCACTGGTTTCT | 9873 |
rs593753 | snp | C/T | 0.297128 | 0.245518 | intron-variant | FCHSD2 | GRCh38.p7 | 11:72980395 | CAGATTATCCAGTTA[C/T]GGGGGCTCATCAGAG | 9873 |
rs640283 | snp | C/T | 0.00676609 | 0.0577691 | intron-variant | FCHSD2 | GRCh38.p7 | 11:72971714 | TCTTCCCCAGAATCT[C/T]CAGATAAGAATGCAG | 9873 |
rs658164 | snp | A/G | 0.00716266 | 0.059414 | intron-variant | FCHSD2 | GRCh38.p7 | 11:72977623 | atgtgctgccgaagc[A/G]agcatgctctcacac | 9873 |
rs671766 | snp | A/G | 0.00676609 | 0.0577691 | intron-variant | FCHSD2 | GRCh38.p7 | 11:72972713 | ACCAATGTAGCAGGG[A/G]AAGAATCTATTACCC | 9873 |
rs724673 | snp | C/T | 0.333952 | 0.235483 | intron-variant | FCHSD2 | GRCh38.p7 | 11:73084663 | CCCATGCCAGTAATC[C/T]CAATGCTTTGGGAGG | 9873 |
rs898384 | snp | C/T | 0.0854556 | 0.188216 | intron-variant | FCHSD2 | GRCh38.p7 | 11:72985604 | CTTCTATTATTTCCA[C/T]CATTAAAAGTACTTC | 9873 |
rs975261 | snp | A/G | 0.0869089 | 0.189476 | intron-variant | FCHSD2 | GRCh38.p7 | 11:72953443 | TGTTTTACAAGGAGT[A/G]CTAGTGTCAAATAAG | 9873 |
rs994305 | snp | A/G | 0.0178098 | 0.0926698 | intron-variant | FCHSD2 | GRCh38.p7 | 11:72886273 | GTATTTCCCAATACT[A/G]AACTCACATCTCCTT | 9873 |
rs1025411 | snp | C/G | 0.0178098 | 0.0926698 | intron-variant | FCHSD2 | GRCh38.p7 | 11:72955104 | gttagcagtctgtga[C/G]acctgacgctctcca | 9873 |
rs1031706 | snp | C/T | | | intron-variant | FCHSD2 | GRCh38.p7 | 11:72975044 | TTTTTGGAATTAATG[C/T]TTAGCCAGAAAAACC | 9873 |
rs1045315 | snp | C/G | 0 | 0 | missense, intron-variant, nc-transcript-variant | FCHSD2, ATG16L2 | GRCh38.p7 | 11:72841516 | ACCAGCCTCCCAGCA[C/G]CCCCTACCCCAGCCC | 9873 |
rs1045372 | snp | A/C | 0 | 0 | utr-variant-3-prime, intron-variant, nc-transcript-variant | FCHSD2, ATG16L2 | GRCh38.p7 | 11:72836863 | ATGGAATCCAGCACC[A/C]CAGTGCACAGGTCAG | 9873 |
rs1062909 | snp | G/T | | | utr-variant-3-prime, intron-variant, nc-transcript-variant | FCHSD2, ATG16L2 | GRCh38.p7 | 11:72838452 | CAGTCCCTAAATTAC[G/T]GATCATGTGCACTCG | 9873 |
rs1062910 | snp | G/T | | | utr-variant-3-prime, intron-variant, nc-transcript-variant | FCHSD2, ATG16L2 | GRCh38.p7 | 11:72838373 | TCTTCAAGTGGCTTT[G/T]GCTCATCTGATTGAG | 9873 |
rs1065100 | snp | A/G | | | intron-variant | FCHSD2 | GRCh38.p7 | 11:73078633 | TTTTTTTTTTTTATC[A/G]GAATAGTTGTTATTT | 9873 |
rs1290092 | snp | A/G | | | intron-variant | FCHSD2 | GRCh38.p7 | 11:72857649 | cagcctggccaacat[A/G]gtgaaacccccgtct | 9873 |
rs1298094 | snp | A/C | 0 | 0 | utr-variant-3-prime, intron-variant, nc-transcript-variant | FCHSD2, ATG16L2 | GRCh38.p7 | 11:72838251 | AGTCCAATTTTTCCC[A/C]ATAAGGTTTCACTTT | 9873 |
rs1299173 | snp | G/T | 0 | 0 | intron-variant | FCHSD2 | GRCh38.p7 | 11:72890947 | TTCATTCTACAATTT[G/T]GCTGCTTTCTATATT | 9873 |
rs1367698 | snp | C/G | 0.00676609 | 0.0577691 | intron-variant | FCHSD2 | GRCh38.p7 | 11:72863831 | CCTTATCAGTACTTA[C/G]TATAGTCAGTCTTTT | 9873 |
rs1367699 | snp | A/C | 0.225005 | 0.248747 | intron-variant | FCHSD2 | GRCh38.p7 | 11:72863755 | TTTTAATTTCCATTT[A/C]TCTGATAATGTTGAT | 9873 |
rs1380574 | snp | C/T | 0.097727 | 0.198275 | intron-variant | FCHSD2 | GRCh38.p7 | 11:73085166 | CCTTAAACCTAAAGA[C/T]TCATGCTTATTCAAG | 9873 |
rs1380575 | snp | C/T | 0.0482946 | 0.147699 | intron-variant | FCHSD2 | GRCh38.p7 | 11:73085383 | TAACCATTTTGGAAC[C/T]AGGAGTCAACTGAAA | 9873 |
rs1460035 | snp | A/G | 0.0284301 | 0.115788 | intron-variant | FCHSD2 | GRCh38.p7 | 11:73015315 | ATAATACTTATTTTA[A/G]AAAAATATATGTGTT | 9873 |
rs1612659 | snp | A/G | 0.42574 | 0.177808 | intron-variant | FCHSD2 | GRCh38.p7 | 11:73124258 | gtccccccatcccac[A/G]ataggccctggtgtg | 9873 |
rs1614447 | snp | G/T | 0 | 0 | intron-variant | FCHSD2 | GRCh38.p7 | 11:72890881 | AAAAACAAACTTTAT[G/T]GAGATAATTAGGaat | 9873 |
rs1619988 | snp | C/G/T | 0.000399281 | 0.0141238 | intron-variant | FCHSD2 | GRCh38.p7 | 11:73128398 | CACCACTACCTTTTT[C/G/T]GTTTGTTGGCAAGGA | 9873 |
rs1783598 | snp | A/G | 0.342806 | 0.232136 | intron-variant, upstream-variant-2KB | FCHSD2 | GRCh38.p7 | 11:73140418 | TAGGAAGACCTAGAC[A/G]TGGATTGAGCTTGTG | 9873 |
rs1785207 | snp | C/T | 0 | 0 | intron-variant | FCHSD2 | GRCh38.p7 | 11:72898275 | ATAAAATGTAACTCT[C/T]CTGATGATTTTCATA | 9873 |
rs1785208 | snp | C/T | 0 | 0 | intron-variant | FCHSD2 | GRCh38.p7 | 11:72897337 | CAGACACAACTATCC[C/T]TTTTTTTTTTTTTTT | 9873 |
rs1785209 | snp | A/C | | | intron-variant | FCHSD2 | GRCh38.p7 | 11:72882282 | cctgtcttttattac[A/C]agtaaaaaaattagc | 9873 |
rs1785215 | snp | A/T | 0 | 0 | intron-variant | FCHSD2 | GRCh38.p7 | 11:72890838 | AGAATTTAGAGAGAA[A/T]TAAAATAGTTTTGTG | 9873 |
rs1785216 | snp | G/T | 0 | 0 | intron-variant | FCHSD2 | GRCh38.p7 | 11:72888504 | ATCCGTCTCATTCTT[G/T]GCCTTCACATCCTGC | 9873 |
rs1785217 | snp | A/C | 0 | 0 | intron-variant | FCHSD2 | GRCh38.p7 | 11:72920955 | CAAGAATATATATAC[A/C]AGAGGCATTCAGGAT | 9873 |
rs1785218 | snp | A/C | | | intron-variant | FCHSD2 | GRCh38.p7 | 11:72851980 | ctcctgggctcaagc[A/C]atcttcctgcctcag | 9873 |
rs1785219 | snp | A/G | 0.00676609 | 0.0577691 | intron-variant | FCHSD2 | GRCh38.p7 | 11:72852002 | CTGCCTCAGCCTCCC[A/G]AATAGATGGGACTAT | 9873 |
rs1790279 | snp | A/C | 0.00716266 | 0.059414 | intron-variant | FCHSD2 | GRCh38.p7 | 11:72977390 | ACAATCAACAAAGTG[A/C]AGAGACAGCCCATGG | 9873 |
rs1790285 | snp | A/G | 0 | 0 | intron-variant | FCHSD2 | GRCh38.p7 | 11:72924821 | TACATAATTACATGG[A/G]AATCATAGTAATAAT | 9873 |
rs1790286 | snp | A/G | 0 | 0 | intron-variant | FCHSD2 | GRCh38.p7 | 11:72918344 | aattgaaaaagaaga[A/G]ttaaaattacctctc | 9873 |
rs1791053 | snp | G/T | | | intron-variant | FCHSD2 | GRCh38.p7 | 11:73134430 | caagctggagcacag[G/T]ggtgtgatcatggct | 9873 |
rs1791054 | snp | G/T | | | intron-variant | FCHSD2 | GRCh38.p7 | 11:73134317 | atgcctggctaattt[G/T]gtattttttgtagag | 9873 |
rs1801886 | snp | G/T | | | utr-variant-3-prime, intron-variant, nc-transcript-variant | FCHSD2, ATG16L2 | GRCh38.p7 | 11:72838230 | AAATTGGACTGCCCT[G/T]AATTTAGCACCAATT | 9873 |
rs1835644 | snp | C/G | 0.0988009 | 0.199095 | intron-variant | FCHSD2 | GRCh38.p7 | 11:72948162 | AAATTTGCCAGGTCT[C/G]GTGGCACATGCCTGT | 9873 |
rs1982038 | snp | A/G | 0.00676609 | 0.0577691 | intron-variant | FCHSD2 | GRCh38.p7 | 11:72844500 | TCCCTGACAGCAGCA[A/G]TCCACCAGCATCAGC | 9873 |
rs1982585 | snp | C/T | 0.499053 | 0.0217445 | intron-variant | FCHSD2 | GRCh38.p7 | 11:73071429 | GGGCGCAGTGGCTCA[C/T]GCCTGTAATCCCAGC | 9873 |
rs1989449 | snp | C/T | 0.282105 | 0.24793 | intron-variant | FCHSD2 | GRCh38.p7 | 11:73084945 | CCTCCTTCTTACTCT[C/T]ATGTCTTTGGTCTTT | 9873 |
rs2003368 | snp | A/G | 0.377582 | 0.214995 | intron-variant | FCHSD2 | GRCh38.p7 | 11:73129061 | ACATGGTGAAATCTC[A/G]TCTCTACTAAAAATA | 9873 |
rs2032351 | snp | C/G/T | 0.00199481 | 0.0315187 | intron-variant | FCHSD2 | GRCh38.p7 | 11:73045152 | ttttttcatgtgttt[C/G/T]ttggctgcataaatg | 9873 |
rs2043156 | snp | C/G | 0.00636936 | 0.0560724 | intron-variant | FCHSD2 | GRCh38.p7 | 11:72874614 | AGAATGTAGTGAATA[C/G]TTCTCTCTTTTCTGC | 9873 |
rs2060071 | snp | A/T | 0.00279162 | 0.0372561 | intron-variant | FCHSD2 | GRCh38.p7 | 11:72932315 | CCAACTCATTTCCAC[A/T]CTGCAGCTAGGAGGA | 9873 |
rs2060072 | snp | C/T | 0.0588605 | 0.161139 | intron-variant | FCHSD2 | GRCh38.p7 | 11:72896192 | ACTAAATTTCTGATG[C/T]ATGATCTTTCCCTGT | 9873 |
rs2060073 | snp | C/T | 0.00716266 | 0.059414 | intron-variant | FCHSD2 | GRCh38.p7 | 11:72857572 | acacacctgtagtcc[C/T]agctactccggaggc | 9873 |
rs2187494 | snp | A/G | 0.443195 | 0.158668 | intron-variant | FCHSD2 | GRCh38.p7 | 11:73094558 | TATTTATTCTTAAAT[A/G]GAGTAAAGCTCAGTA | 9873 |
rs2276379 | snp | A/G | 0.499053 | 0.0217445 | intron-variant | FCHSD2 | GRCh38.p7 | 11:73047308 | CTTCCCTATCATTTA[A/G]GTATGTAGCTTCTAC | 9873 |
rs2365906 | snp | A/G | 0.0178098 | 0.0926698 | intron-variant | FCHSD2 | GRCh38.p7 | 11:72854437 | TCTGTCTACCTATCT[A/G]TCTATCTGGTTAgag | 9873 |
rs2365907 | snp | G/T | 0.00756178 | 0.0610554 | intron-variant | FCHSD2 | GRCh38.p7 | 11:72878553 | ctgtgatagcttgtt[G/T]tactaggaagaaagt | 9873 |
rs2365908 | snp | A/G | 0.00676609 | 0.0577691 | intron-variant | FCHSD2 | GRCh38.p7 | 11:72880991 | atttttatggctgag[A/G]ctttaaggccacagg | 9873 |
rs2365909 | snp | A/C | 0.00676609 | 0.0577691 | intron-variant | FCHSD2 | GRCh38.p7 | 11:72881074 | cagcaaaggaaacaa[A/C]agagttaacagatga | 9873 |
rs2366252 | snp | C/G | 0.0123036 | 0.0774623 | intron-variant | FCHSD2 | GRCh38.p7 | 11:73034956 | GCAGGTGACATTTAT[C/G]CTATAGTACTTTAGC | 9873 |
rs2366256 | snp | A/G | 0.369754 | 0.219451 | intron-variant | FCHSD2 | GRCh38.p7 | 11:73109675 | ACTTTTTCCCTTTCC[A/G]CTTTGGATGCTCTTT | 9873 |
rs2446746 | snp | A/G | 0.00159617 | 0.0282053 | intron-variant | FCHSD2 | GRCh38.p7 | 11:72981874 | TGGTCCTAGCTACAT[A/G]GGAGGCTGAGGCAAG | 9873 |
rs2886599 | snp | A/C | 0.190205 | 0.242744 | intron-variant | FCHSD2 | GRCh38.p7 | 11:73010226 | TTCATTCAATGAATT[A/C]TTCCATTACAGAATT | 9873 |
rs3018279 | snp | A/G | | | intron-variant | FCHSD2 | GRCh38.p7 | 11:73131701 | ttttttttttttgga[A/G]acatagtctgggttg | 9873 |
rs3018280 | snp | G/T | | | intron-variant | FCHSD2 | GRCh38.p7 | 11:73131691 | ttggaaacatagtct[G/T]ggttggtggcctaaa | 9873 |
rs3018281 | snp | G/T | | | intron-variant | FCHSD2 | GRCh38.p7 | 11:73131550 | tgcccAGATATTTTT[G/T]GTAGTAAtttttatt | 9873 |
rs3039677 | in-del | -/CT | 0.0341408 | 0.126114 | intron-variant | FCHSD2 | GRCh38.p7 | 11:72985692 | GAGAAAGTCCTGGGA[-/CT]CTCTGCCCTGTATGA | 9873 |
rs3040733 | in-del | -/TATTA | | | intron-variant | FCHSD2 | GRCh38.p7 | 11:73033994 | GGTATTAAAATTGTC[-/TATTA]TATTTTCATGATTTC | 9873 |
rs3133221 | snp | A/C | 0 | 0 | intron-variant | FCHSD2 | GRCh38.p7 | 11:73128012 | GAAAAAGACCATTTC[A/C]AAAAAAAAAAAAAAA | 9873 |
rs3207374 | snp | A/G | 0.0429648 | 0.14013 | intron-variant | FCHSD2 | GRCh38.p7 | 11:72924833 | CTCTGGTTATGTTAC[A/G]TAATTACATGGAAAT | 9873 |
rs3207375 | snp | C/T | | | intron-variant | FCHSD2 | GRCh38.p7 | 11:72924762 | AATGGTGTCATCTAG[C/T]GGTGTAAGCACTATA | 9873 |
rs3217361 | in-del | -/GGG | 0.372547 | 0.217904 | intron-variant, utr-variant-3-prime, nc-transcript-variant | FCHSD2, ATG16L2 | GRCh38.p7 | 11:72843362 | CAAAACAAGTTTACA[-/GGG]CACACAATTTAGACA | 9873 |
rs3223742 | microsatellite | (CA)20/21/22/23/24/27 | 0.683178 | 0.165982 | intron-variant | FCHSD2 | GRCh38.p7 | 11:72959855 | GGTATATTGATATNA[(CA)20/21/22/23/24/27]CCTAGAAACTTAAAA | 9873 |
rs3814729 | snp | C/T | 0.00279162 | 0.0372561 | utr-variant-3-prime, intron-variant, nc-transcript-variant | FCHSD2, ATG16L2 | GRCh38.p7 | 11:72838441 | AATATACTGTACGAG[C/T]GCACATGATCAGTAA | 9873 |
rs3814730 | snp | A/G | 0.222333 | 0.248464 | intron-variant | FCHSD2 | GRCh38.p7 | 11:72844508 | AGCAGCAATCCACCA[A/G]CATCAGCCACCCACA | 9873 |
rs3862796 | snp | C/T | 0.297128 | 0.245518 | intron-variant | FCHSD2 | GRCh38.p7 | 11:72994477 | TTAAATAATTTACTC[C/T]GAGTCACACGGCAAG | 9873 |
rs3903492 | snp | A/G | 0.0178098 | 0.0926698 | intron-variant | FCHSD2 | GRCh38.p7 | 11:72956524 | agagaaattaatgct[A/G]ttgattataagtcaa | 9873 |
rs4102512 | snp | C/T | 0.000798403 | 0.0199641 | intron-variant | FCHSD2 | GRCh38.p7 | 11:72994592 | CTcacggtgaaaccc[C/T]gtctctactaaaaat | 9873 |
rs4329714 | snp | A/T | 0.00676609 | 0.0577691 | intron-variant | FCHSD2 | GRCh38.p7 | 11:72965562 | AAACTCAATATTTTC[A/T]TGTATTTATTTCTGA | 9873 |
rs4373969 | snp | A/G | 0.0182019 | 0.0936463 | intron-variant | FCHSD2 | GRCh38.p7 | 11:72914101 | ctcgctgcaaactgc[A/G]cttcctgggttcaag | 9873 |
rs4394861 | snp | C/T | 0.457271 | 0.139781 | intron-variant | FCHSD2 | GRCh38.p7 | 11:73089925 | AAAAGCCTACCCTTA[C/T]CAGATGTTAAAAATT | 9873 |
rs4400839 | snp | G/T | 0.361474 | 0.223771 | intron-variant | FCHSD2 | GRCh38.p7 | 11:72964620 | CTTCTATCATCATCA[G/T]CAGCAGCAGAATCTT | 9873 |
rs4465389 | snp | A/T | 0 | 0 | intron-variant | FCHSD2 | GRCh38.p7 | 11:72954197 | cagtagatgtgggga[A/T]ttttttttttttttt | 9873 |
rs4480564 | snp | C/T | 0 | 0 | intron-variant | FCHSD2 | GRCh38.p7 | 11:72932177 | TTATTGATTCCACTT[C/T]TTAAATATTTACCAA | 9873 |
rs4515995 | snp | A/G | 0.404035 | 0.196909 | intron-variant | FCHSD2 | GRCh38.p7 | 11:72976750 | cagaatcaaatccat[A/G]catctacagtgaact | 9873 |
rs4578418 | snp | G/T | 0.143284 | 0.226079 | intron-variant | FCHSD2 | GRCh38.p7 | 11:72980647 | CTAATTTGCAATCAT[G/T]TATATATGTATGTGT | 9873 |
rs4594026 | snp | A/G | 0.0178098 | 0.0926698 | intron-variant | FCHSD2 | GRCh38.p7 | 11:72964552 | TTTTGTTGCCTTTTC[A/G]TCTGGAGTCTAGCAG | 9873 |
rs4643105 | snp | C/T | 0.00676609 | 0.0577691 | intron-variant | FCHSD2 | GRCh38.p7 | 11:72964505 | AACAGTACACATCTG[C/T]CTTCTTCATTCCTTA | 9873 |
rs4944015 | snp | A/G | 0.0178098 | 0.0926698 | intron-variant | FCHSD2 | GRCh38.p7 | 11:72846162 | TACTCATGATGAGTA[A/G]GCTGCTCCTCCTTTT | 9873 |