SNP - dbSNP |
dbSNP | Type | Alleles | Het | Se(het) | Fxn-class | Gene Name | Assembly | Chr-pos | Sequence | Entrez Gene |
rs14482 | snp | A/T | 0 | 0 | utr-variant-3-prime, nc-transcript-variant | POC1B | GRCh38.p7 | 12:89419843 | GCCACTTAGTTTTTG[A/T]AAGCTCTTGAAAATG | 282809 |
rs704085 | snp | C/T | 0.467234 | 0.12373 | intron-variant | POC1B | GRCh38.p7 | 12:89424950 | ATGGCTTAAGCTGTG[C/T]GAGTGTGTGTGTGTG | 282809 |
rs704088 | snp | A/G | 0.346368 | 0.23068 | intron-variant | POC1B | GRCh38.p7 | 12:89426053 | atgaaatataattca[A/G]ccataaaaaggaatg | 282809 |
rs704089 | snp | A/T | 0.472522 | 0.113946 | intron-variant | POC1B | GRCh38.p7 | 12:89428537 | aagcttgaatatttt[A/T]gaaaatgTTAACCAC | 282809 |
rs704090 | snp | C/T | 0.00159617 | 0.0282053 | intron-variant | POC1B | GRCh38.p7 | 12:89455617 | CATGTAGGACATCTT[C/T]AACTATTTTGATTGA | 282809 |
rs737634 | snp | C/G | 0.499831 | 0.00918375 | intron-variant | POC1B | GRCh38.p7 | 12:89465831 | TTAAACTATTTTCTA[C/G]ATTTTGTTTAATCCA | 282809 |
rs765752 | snp | C/T | | | intron-variant | POC1B | GRCh38.p7 | 12:89477033 | ATTCTAGGGCCAGTT[C/T]TGCAACTGTCCAGCT | 282809 |
rs770369 | snp | C/T | 0.472709 | 0.11358 | downstream-variant-500B | POC1B | GRCh38.p7 | 12:89419530 | catcagcatcaccta[C/T]gagattgttagagat | 282809 |
rs770373 | snp | C/T | 0.391024 | 0.206427 | intron-variant | POC1B | GRCh38.p7 | 12:89424512 | GACAAATATTAGTAT[C/T]TAGTATTCTCATTCT | 282809 |
rs770374 | snp | G/T | 0.491783 | 0.0635686 | intron-variant | POC1B | GRCh38.p7 | 12:89424245 | AAACAGAATCATATG[G/T]GGGTTCTTAAAAGAC | 282809 |
rs770375 | snp | C/T | 0.418007 | 0.185132 | intron-variant | POC1B | GRCh38.p7 | 12:89423587 | ATTATAGTTCAGTAA[C/T]GATAAACACCGTCCA | 282809 |
rs770376 | snp | A/T | 0.400682 | 0.199487 | intron-variant | POC1B | GRCh38.p7 | 12:89423302 | gagacactgtctcta[A/T]ataataaagaataaa | 282809 |
rs770377 | snp | A/T | 0.428786 | 0.174744 | intron-variant | POC1B | GRCh38.p7 | 12:89422666 | tattaattcctggag[A/T]ttgcaaatgatgata | 282809 |
rs796385 | snp | A/C | 0.419296 | 0.183954 | intron-variant | POC1B | GRCh38.p7 | 12:89421637 | GCGAAATTCCACATG[A/C]CAGCCAGATGCCACT | 282809 |
rs812190 | snp | A/G | 0.0314385 | 0.121371 | intron-variant | POC1B | GRCh38.p7 | 12:89476187 | GCTAGAATTACAGGC[A/G]TGATCCACTGTGCCC | 282809 |
rs876554 | snp | A/G | 0.499937 | 0.0055907 | intron-variant | POC1B | GRCh38.p7 | 12:89491696 | ATGGCAGTAAGCACT[A/G]TGGAGAAAGAGCTGG | 282809 |
rs876555 | snp | A/G | 0.498693 | 0.0255257 | intron-variant | POC1B | GRCh38.p7 | 12:89491694 | GGCAGTAAGCACTAT[A/G]GAGAAAGAGCTGGGT | 282809 |
rs876556 | snp | A/G | 0.330249 | 0.23677 | intron-variant | POC1B | GRCh38.p7 | 12:89491665 | GTTAGAAGGGGGCGC[A/G]TAATTTTTTTTTCTT | 282809 |
rs882781 | snp | A/G | 0.330016 | 0.236849 | intron-variant | POC1B | GRCh38.p7 | 12:89489525 | TCTGCCTATCTTCTT[A/G]TATTCTTCTTAGGCT | 282809 |
rs937162 | snp | C/T | | | intron-variant | POC1B | GRCh38.p7 | 12:89491077 | GGTCAAGAGCAGCGC[C/T]GACTTGTGCCCTGGG | 282809 |
rs937163 | snp | C/T | 0.384593 | 0.210677 | intron-variant | POC1B | GRCh38.p7 | 12:89489818 | GGTCATACAAACATA[C/T]GTTCTAGGCATGGGG | 282809 |
rs1008764 | snp | C/T | 0.316968 | 0.240864 | intron-variant | POC1B | GRCh38.p7 | 12:89493872 | GATAGGAGTGCCTTA[C/T]GTTTATTGTGCTGGT | 282809 |
rs1008785 | snp | C/T | | | intron-variant | POC1B | GRCh38.p7 | 12:89496469 | aatcagcttcaacag[C/T]tgtcaggattctgcc | 282809 |
rs1054807 | snp | A/G | 0.319616 | 0.240112 | intron-variant, utr-variant-3-prime | POC1B, POC1B-GALNT4, GALNT4 | GRCh38.p7 | 12:89519642 | GTATAGTCTTAGTTG[A/G]TTTAGGGTCTCAATT | 282809 |
rs1344682 | snp | C/G | 0.375399 | 0.216275 | intron-variant | POC1B | GRCh38.p7 | 12:89458600 | TGAATAATTAGAATG[C/G]TTTCTGGTACAAGAT | 282809 |
rs1344683 | snp | C/T | 0.399073 | 0.200692 | intron-variant | POC1B | GRCh38.p7 | 12:89458668 | ACAATAAATACTATT[C/T]TTGAGATCTATTAGA | 282809 |
rs1344684 | snp | A/G | 0.399073 | 0.200692 | intron-variant | POC1B | GRCh38.p7 | 12:89458895 | GAATCCTAAATGGAA[A/G]GGCTAAAATTCTTAA | 282809 |
rs1344685 | snp | G/T | 0.498734 | 0.0251279 | intron-variant | POC1B | GRCh38.p7 | 12:89459177 | TAATACGTGAGACAG[G/T]GGGTATGGATTAGAC | 282809 |
rs1353027 | snp | G/T | 0.375399 | 0.216275 | intron-variant | POC1B | GRCh38.p7 | 12:89477403 | gattccaggaaggaa[G/T]tctgggcACATAGAT | 282809 |
rs1427831 | snp | A/G | 0.385168 | 0.210309 | intron-variant | POC1B | GRCh38.p7 | 12:89487782 | CCTGACAAATATGCC[A/G]CTGCCTCCTCTTCCC | 282809 |
rs1492911 | snp | A/G | 0.376394 | 0.215696 | intron-variant | POC1B | GRCh38.p7 | 12:89434794 | CACTTAGCATGTTGT[A/G]TAAAAGATTCTTGTT | 282809 |
rs1549592 | snp | A/C | 0 | 0 | intron-variant | POC1B | GRCh38.p7 | 12:89496750 | GATAATGAGTGATAC[A/C]AATCAAATCAAAGGC | 282809 |
rs1632116 | snp | A/G | | | intron-variant | POC1B | GRCh38.p7 | 12:89464445 | TGAAATTTTTTAAAC[A/G]GGGAACAACTTTAGT | 282809 |
rs1650332 | snp | A/T | 0 | 0 | intron-variant | POC1B | GRCh38.p7 | 12:89510498 | ctcagccaggctgtt[A/T]ctctgaggctgctct | 282809 |
rs1650352 | snp | A/G | | | intron-variant | POC1B | GRCh38.p7 | 12:89464451 | GTTGTTCCCTGTCTA[A/G]AAAATTTCATAACCT | 282809 |
rs1689415 | snp | A/C | 0 | 0 | intron-variant | POC1B | GRCh38.p7 | 12:89432346 | AGCCCAGATCGAGCC[A/C]CTGTACTTCCAGCCT | 282809 |
rs1845141 | snp | A/G | 0.376195 | 0.215812 | intron-variant | POC1B | GRCh38.p7 | 12:89434954 | TGCTAAGTTTTTTTA[A/G]AAAAAATATTAAATA | 282809 |
rs2018669 | snp | A/C | 0.11963 | 0.213316 | intron-variant | POC1B | GRCh38.p7 | 12:89491489 | tacaggcatgcacca[A/C]catgcctggataatt | 282809 |
rs2052828 | snp | C/T | 0.398894 | 0.200825 | intron-variant | POC1B | GRCh38.p7 | 12:89495013 | agtactaaggttttg[C/T]gactgtcatacagca | 282809 |
rs2162678 | snp | C/T | 0.330249 | 0.23677 | intron-variant | POC1B | GRCh38.p7 | 12:89479589 | TAAATTAGATTATAA[C/T]AAAGGTTAGTCTAGA | 282809 |
rs2230281 | snp | C/T | 0.409027 | 0.1929 | intron-variant, missense | POC1B, POC1B-GALNT4, GALNT4 | GRCh38.p7 | 12:89523741 | AATTCTATATGCAGA[C/T]AGGGGAGCCCATGAT | 282809 |
rs2230282 | snp | C/T | 0.184317 | 0.241217 | intron-variant, synonymous-codon | POC1B, POC1B-GALNT4, GALNT4 | GRCh38.p7 | 12:89523260 | CTGGTATTTGAAAAA[C/T]GTTTTTCCTAATTTA | 282809 |
rs2230283 | snp | A/G | 0.400214 | 0.19984 | intron-variant, missense | POC1B, POC1B-GALNT4, GALNT4 | GRCh38.p7 | 12:89523034 | GAGTTATGTGCAGAG[A/G]TACCTGAGCAAAAAA | 282809 |
rs2407934 | snp | G/T | | | intron-variant | POC1B | GRCh38.p7 | 12:89490926 | tccaagccaggacct[G/T]gactgctcagcctcc | 282809 |
rs2559829 | snp | A/C | 0 | 0 | | | GRCh38.p7 | 12:89432576 | ttacttttctccttc[A/C]cccactagagtataa | 282809 |
rs2559830 | snp | A/G | | | | | GRCh38.p7 | 12:89432444 | tccttacatggcaaa[A/G]agggctttgccaatg | 282809 |
rs2717411 | snp | G/T | | | intron-variant | POC1B | GRCh38.p7 | 12:89432572 | atgggaatactctag[G/T]gggggaaggagaaaa | 282809 |
rs2717412 | snp | A/G | | | intron-variant | POC1B | GRCh38.p7 | 12:89432651 | aaaaaataaagcTAA[A/G]CAATGGGCTGTGTTA | 282809 |
rs3068609 | in-del | -/CTGC | | | intron-variant | POC1B | GRCh38.p7 | 12:89490929 | aagccaggacctgga[-/CTGC]tcagcctcctaacaa | 282809 |
rs3168593 | snp | A/G | 0 | 0 | intron-variant, utr-variant-3-prime | POC1B, POC1B-GALNT4, GALNT4 | GRCh38.p7 | 12:89520145 | GAACAGCCTAACTAT[A/G]CTGGATTATTGATAT | 282809 |
rs3759319 | snp | A/G | 0.0119091 | 0.0762411 | intron-variant, utr-variant-3-prime | POC1B, POC1B-GALNT4, GALNT4 | GRCh38.p7 | 12:89522152 | ATAGCTCAAGTTTAC[A/G]AAGTACGGAATGTAA | 282809 |
rs3803128 | snp | G/T | 0.319616 | 0.240112 | intron-variant | POC1B | GRCh38.p7 | 12:89466542 | AGTAATAGGAAATGA[G/T]AAATTAAATCTAAGG | 282809 |
rs3864928 | snp | C/G | 0.390464 | 0.206809 | intron-variant, utr-variant-3-prime | POC1B, POC1B-GALNT4, GALNT4 | GRCh38.p7 | 12:89521772 | AGGAGATTGAAAGCA[C/G]CATTCACAATTGCCA | 282809 |
rs3892685 | snp | A/T | 0.330249 | 0.23677 | intron-variant | POC1B | GRCh38.p7 | 12:89491052 | GGCACTACACTGGCA[A/T]CTCCTCTCACCCAGG | 282809 |
rs3958726 | snp | A/C | 0.398534 | 0.201091 | intron-variant | POC1B | GRCh38.p7 | 12:89463646 | TTTTAATTAAGATGG[A/C]GTGCCTAGGCCAGGA | 282809 |
rs3990284 | in-del | -/CATTCATT | | | intron-variant | POC1B | GRCh38.p7 | 12:89478078 | AGTTGCCCACAACCA[-/CATTCATT]CATTCATTCATTCAT | 282809 |
rs4254123 | snp | A/C | 0.398714 | 0.200958 | intron-variant | POC1B | GRCh38.p7 | 12:89514441 | TTAGACGAAGTCTTA[A/C]TCTGTCGTCCAGGCT | 282809 |
rs4499059 | snp | G/T | 0.384593 | 0.210677 | intron-variant | POC1B | GRCh38.p7 | 12:89442393 | GGAAGCCCATCAGAC[G/T]AACAGCAGATGTCTC | 282809 |
rs4589356 | snp | C/T | 0.00557542 | 0.0525036 | intron-variant, utr-variant-3-prime | POC1B, POC1B-GALNT4, GALNT4 | GRCh38.p7 | 12:89519779 | CAAGTTATTTTGAGT[C/T]ATAGGGATCCTCCTG | 282809 |
rs4842488 | snp | C/G | 0.319616 | 0.240112 | intron-variant | POC1B | GRCh38.p7 | 12:89487787 | CAAATATGCCACTGC[C/G]TCCTCTTCCCCTTCT | 282809 |
rs4842489 | snp | C/G | 0.375996 | 0.215928 | intron-variant | POC1B | GRCh38.p7 | 12:89501942 | AATTTCCAGTTGTTT[C/G]CTGAGTGAGCCATTG | 282809 |
rs4842490 | snp | C/T | 0.378174 | 0.214642 | intron-variant | POC1B | GRCh38.p7 | 12:89503892 | gcctggcagccgccc[C/T]gtctgagaagtgagg | 282809 |
rs4842491 | snp | C/T | 0.390464 | 0.206809 | intron-variant | POC1B | GRCh38.p7 | 12:89511760 | CCCCAGACATACATC[C/T]ATAAACGTAGATGGG | 282809 |
rs4842492 | snp | G/T | 0.390838 | 0.206555 | intron-variant | POC1B | GRCh38.p7 | 12:89515285 | GACAAATATATCATT[G/T]TATTTATTTATTTAT | 282809 |
rs4842493 | snp | A/G | 0.390838 | 0.206555 | intron-variant | POC1B | GRCh38.p7 | 12:89515523 | CTTAATTTAGATAGA[A/G]TGATCAGGGGCATTT | 282809 |
rs4842494 | snp | A/G | 0.399073 | 0.200692 | intron-variant | POC1B | GRCh38.p7 | 12:89515693 | TCACCAGCAGAACAT[A/G]AGCACTTCTCAAATC | 282809 |
rs4842653 | snp | C/T | 0.319376 | 0.240181 | intron-variant | POC1B | GRCh38.p7 | 12:89440336 | TAACAAGCTAGTTGG[C/T]CCCAGTCTCCACGTA | 282809 |
rs4842654 | snp | A/T | 0.319376 | 0.240181 | intron-variant | POC1B | GRCh38.p7 | 12:89440651 | AGAATTAGAGGAGAG[A/T]AGGTTCCAAGATGGC | 282809 |
rs4842655 | snp | A/G | 0.399073 | 0.200692 | intron-variant | POC1B | GRCh38.p7 | 12:89444232 | tcaacagaaaatgag[A/G]gaatcctccctaact | 282809 |
rs4842656 | snp | A/G | 0.375996 | 0.215928 | intron-variant | POC1B | GRCh38.p7 | 12:89444300 | tggcagagacacaac[A/G]aaaaaagaatatttt | 282809 |
rs4842657 | snp | A/T | 0.385359 | 0.210185 | intron-variant | POC1B | GRCh38.p7 | 12:89444310 | acaacgaaaaaagaa[A/T]attttagaccaatat | 282809 |
rs4842658 | snp | A/G | 0.379912 | 0.213703 | intron-variant | POC1B | GRCh38.p7 | 12:89459631 | AAAAAAAAAAAACCC[A/G]ACTTACTGTGGTAGA | 282809 |
rs4842659 | snp | A/G | 0.398354 | 0.201224 | intron-variant | POC1B | GRCh38.p7 | 12:89503973 | cccggcagccgcccc[A/G]tccgggagggaggtg | 282809 |
rs5799907 | in-del | -/A | | | intron-variant | POC1B | GRCh38.p7 | 12:89473667 | TCGCCTCAGAAAAGA[-/A]AAAAAAAAAAAAAAA | 282809 |
rs6144799 | in-del | -/TCCAAGCCAGGACCTGGACTGC | 0.496842 | 0.0396107 | intron-variant | POC1B | GRCh38.p7 | 12:89490911 | CAGCCACCACCTTGA[-/TCCAAGCCAGGACCTGGACTGC]TCAGCCTCCTAACAA | 282809 |
rs6538188 | snp | A/G | 0.375598 | 0.21616 | intron-variant | POC1B | GRCh38.p7 | 12:89463361 | TCGCCATCGCTTAGA[A/G]TGGCTCTACTGTCTT | 282809 |
rs6538189 | snp | A/C | 0.358935 | 0.225048 | intron-variant | POC1B | GRCh38.p7 | 12:89492146 | TTAATATTTATAACT[A/C]ATTTGATTTAATTAT | 282809 |
rs6538190 | snp | C/T | 0.338006 | 0.233998 | intron-variant | POC1B | GRCh38.p7 | 12:89492165 | TGATTTAATTATAGT[C/T]AATACTTAATCACAA | 282809 |
rs7133847 | snp | C/T | 0.00517822 | 0.0506191 | upstream-variant-2KB | POC1B, POC1B-GALNT4, GALNT4 | GRCh38.p7 | 12:89526572 | CCATTCTCATCTGCT[C/T]ATTTGCGTATACCTT | 282809 |
rs7134172 | snp | A/G | 0.498754 | 0.0249289 | intron-variant | POC1B | GRCh38.p7 | 12:89447940 | CCCTGAACATGGAGC[A/G]ACTGGACCTCCTGGA | 282809 |
rs7136349 | snp | C/G | 0.498714 | 0.0253268 | intron-variant | POC1B | GRCh38.p7 | 12:89460561 | AAAAAACTATTGGAA[C/G]TACCCTAAGTGTCTA | 282809 |
rs7137121 | snp | C/T | 0.376394 | 0.215696 | intron-variant | POC1B | GRCh38.p7 | 12:89448057 | ACACAGTTTGTATCA[C/T]GGACTTGGGCTTTCT | 282809 |
rs7295439 | snp | G/T | 0.498611 | 0.0263212 | intron-variant | POC1B | GRCh38.p7 | 12:89431345 | TGTCAGAGATATTGT[G/T]AAAGATATACAAACA | 282809 |
rs7299091 | snp | A/T | 0.385359 | 0.210185 | intron-variant | POC1B | GRCh38.p7 | 12:89453048 | TATCTGAAAAAATAT[A/T]AATGTGTTTTCTGTT | 282809 |
rs7299139 | snp | A/G | 0.375598 | 0.21616 | intron-variant | POC1B | GRCh38.p7 | 12:89455093 | aatctcagcactttg[A/G]gaggccgaggtgggt | 282809 |
rs7299172 | snp | A/T | 0.390838 | 0.206555 | intron-variant | POC1B | GRCh38.p7 | 12:89506075 | GGGTGGACATAGTAG[A/T]TTTGAGATGCCAATT | 282809 |
rs7299300 | snp | G/T | | | intron-variant | POC1B | GRCh38.p7 | 12:89476080 | cacggcgaagttttg[G/T]aatttttgtagagac | 282809 |
rs7299750 | snp | C/T | 0.00735752 | 0.0602049 | intron-variant, synonymous-codon | POC1B, POC1B-GALNT4, GALNT4 | GRCh38.p7 | 12:89522888 | ATCAGGTCGGCCCTC[C/T]GGTGTCCGATAAGCA | 282809 |
rs7306772 | snp | G/T | 0.391024 | 0.206427 | intron-variant, utr-variant-3-prime | POC1B, POC1B-GALNT4, GALNT4 | GRCh38.p7 | 12:89520365 | CTCCCATATAACAGG[G/T]GGCTAACAAGAAAAC | 282809 |
rs7308051 | snp | A/C | 0.498714 | 0.0253268 | intron-variant | POC1B | GRCh38.p7 | 12:89457189 | ATGCAATTGTGCTTC[A/C]TGCCAAAGCAGAAAT | 282809 |
rs7308186 | snp | A/G | 0.384976 | 0.210431 | intron-variant | POC1B | GRCh38.p7 | 12:89457317 | TATTAATGGAAAGGT[A/G]AATAGTTGAAAAAGT | 282809 |
rs7308258 | snp | C/T | 0.499824 | 0.00938333 | intron-variant | POC1B | GRCh38.p7 | 12:89457256 | GAAGCAAAAGAGAAA[C/T]TGTCAGTGTAGGGAG | 282809 |
rs7308306 | snp | C/T | 0.498693 | 0.0255257 | intron-variant | POC1B | GRCh38.p7 | 12:89448170 | TCAGGATGGGCATGG[C/T]GGTTCATGCCTGTAA | 282809 |
rs7308380 | snp | A/C | 0.375399 | 0.216275 | intron-variant | POC1B | GRCh38.p7 | 12:89457455 | TAACTACTTTATGAG[A/C]ATCTATGTCTTCAGA | 282809 |
rs7309744 | snp | A/G | 0.402277 | 0.198272 | intron-variant | POC1B | GRCh38.p7 | 12:89445052 | TCCAACTTACAAGGG[A/G]TGTGAAGGACCTCTT | 282809 |
rs7310238 | snp | A/G | 0.390838 | 0.206555 | intron-variant | POC1B | GRCh38.p7 | 12:89505925 | TGTAGGGTCTATGAG[A/G]CTTGCTAATGACTAG | 282809 |
rs7310515 | snp | C/G | 0.398894 | 0.200825 | intron-variant | POC1B | GRCh38.p7 | 12:89505850 | AGTCAGGAGAAAGCA[C/G]TGGTCTGGACTAGAC | 282809 |
rs7313499 | snp | C/T | 0.499816 | 0.0095829 | intron-variant | POC1B | GRCh38.p7 | 12:89449910 | GTTTAAAGAAGGTTA[C/T]TCAAATCAGTGAAAC | 282809 |
rs7313924 | snp | C/G | 0.390838 | 0.206555 | intron-variant | POC1B | GRCh38.p7 | 12:89506135 | AGATGGATATACCCC[C/G]CCTGGAGCCCAGGGA | 282809 |
rs7314364 | snp | C/T | 0.0425829 | 0.139564 | intron-variant | POC1B | GRCh38.p7 | 12:89446456 | tgtcctttttaggga[C/T]gtggatgaaggtgga | 282809 |