SNP - dbSNP |
dbSNP | Type | Alleles | Het | Se(het) | Fxn-class | Gene Name | Assembly | Chr-pos | Sequence | Entrez Gene |
rs3826 | snp | A/C | 0.366885 | 0.220993 | intron-variant, utr-variant-3-prime | FANCD2, FANCD2OS | GRCh38.p7 | 3:10099381 | cctaccttggcctca[A/C]aaagtgctaggatta | 2177 |
rs166485 | snp | A/G/T | | | intron-variant | FANCD2, FANCD2OS | GRCh38.p7 | 3:10083849 | ccaggctggagtgca[A/G/T]tggcgcgatctcggt | 2177 |
rs174728 | snp | G/T | 0 | 0 | intron-variant | FANCD2, FANCD2OS | GRCh38.p7 | 3:10092935 | ggaggctgaggctgg[G/T]ggatcactagagccc | 2177 |
rs200167 | snp | A/G | | | intron-variant | FANCD2 | GRCh38.p7 | 3:10050554 | ctcactgcaagctcc[A/G]cctcctgggttcacg | 2177 |
rs200168 | snp | A/G | 0.100944 | 0.200705 | intron-variant | FANCD2 | GRCh38.p7 | 3:10050539 | gcctcctgggttcac[A/G]ccattctcctgcctc | 2177 |
rs200169 | snp | C/G | 0 | 0 | intron-variant | FANCD2 | GRCh38.p7 | 3:10052628 | ggttcaagcgattct[C/G]ctgcctcagcctccc | 2177 |
rs266884 | snp | G/T | | | intron-variant | FANCD2, FANCD2OS | GRCh38.p7 | 3:10083892 | ttttttttttttttt[G/T]ttttgagacggagtc | 2177 |
rs266885 | snp | A/G | | | intron-variant | FANCD2, FANCD2OS | GRCh38.p7 | 3:10083885 | tttttttttttttga[A/G]atggagtcttgctct | 2177 |
rs266886 | snp | C/T | | | intron-variant | FANCD2, FANCD2OS | GRCh38.p7 | 3:10083875 | tttgagacggagtct[C/T]gctctgtcgcccagg | 2177 |
rs271993 | snp | A/G | | | intron-variant | FANCD2 | GRCh38.p7 | 3:10050617 | ttttttttttgagac[A/G]gagtcttgctctgtc | 2177 |
rs271994 | snp | A/G | | | intron-variant | FANCD2 | GRCh38.p7 | 3:10050595 | tgctctgtcgcccag[A/G]ctggagtgcagtggt | 2177 |
rs271995 | snp | C/T | 0.000399281 | 0.0141238 | intron-variant | FANCD2 | GRCh38.p7 | 3:10055545 | gattacaggcgtgag[C/T]caccgtgcccggcca | 2177 |
rs271996 | snp | A/G | | | intron-variant | FANCD2 | GRCh38.p7 | 3:10055608 | agccaggatggtctc[A/G]atctcctgacctcat | 2177 |
rs365100 | snp | G/T | | | intron-variant | FANCD2 | GRCh38.p7 | 3:10075240 | caggctggagtgcag[G/T]ggcgcggatctccac | 2177 |
rs375954 | snp | A/G | 0 | 0 | intron-variant | FANCD2 | GRCh38.p7 | 3:10072281 | aaaaaaaaaaaaaaa[A/G]GGGAAAGGTAtatat | 2177 |
rs401900 | snp | C/T | 0 | 0 | intron-variant | FANCD2 | GRCh38.p7 | 3:10076148 | GCTATATTACACTGC[C/T]AGAAGCAGAATGGGT | 2177 |
rs419999 | snp | C/G | 0.00597247 | 0.0543191 | intron-variant | FANCD2, FANCD2OS | GRCh38.p7 | 3:10089116 | tgtatttttagtagg[C/G]acagggtttcactat | 2177 |
rs455913 | snp | A/C/G | 0.000399281 | 0.0141238 | intron-variant | FANCD2 | GRCh38.p7 | 3:10059731 | gaatggcatgaagcc[A/C/G]ggaggtggagctagc | 2177 |
rs460965 | snp | A/G | 0.0153892 | 0.0863585 | intron-variant | FANCD2, FANCD2OS | GRCh38.p7 | 3:10081243 | CTTAGCAGCTTCTAA[A/G]TCTAGGCTTCTGACC | 2177 |
rs462262 | snp | C/T | | | intron-variant | FANCD2, FANCD2OS | GRCh38.p7 | 3:10091435 | atccaggttggagtg[C/T]agtggtgcaaacttg | 2177 |
rs462674 | snp | C/T | 0.0126979 | 0.078662 | intron-variant | FANCD2, FANCD2OS | GRCh38.p7 | 3:10091068 | agaaaaaaCATATAC[C/T]GGCTGTAGCTTCTCT | 2177 |
rs626693 | snp | A/G | 0.040671 | 0.13668 | intron-variant | FANCD2 | GRCh38.p7 | 3:10044394 | GATGATTGGCCGGGC[A/G]CGGTAGCTCACGCCT | 2177 |
rs664233 | snp | A/G | 0.000733235 | 0.0191332 | intron-variant | FANCD2 | GRCh38.p7 | 3:10043596 | GCCTGGATTAAGGTG[A/G]GATCTTTGGAACTTT | 2177 |
rs722509 | snp | A/T | 0.295599 | 0.245806 | intron-variant | FANCD2 | GRCh38.p7 | 3:10060693 | CTGATTCTTTTAGAA[A/T]GCATTTTTCTTTATC | 2177 |
rs722510 | snp | C/G | 0 | 0 | intron-variant | FANCD2 | GRCh38.p7 | 3:10060738 | GCACTAGACAATGCA[C/G]GTGTCTACATTGCTG | 2177 |
rs780961 | snp | C/G | | | intron-variant | FANCD2 | GRCh38.p7 | 3:10079339 | ccagcctgggagaca[C/G]agcgagactccgtct | 2177 |
rs781871 | snp | A/T | 0.31503 | 0.241394 | upstream-variant-2KB, intron-variant | FANCD2, CIDECP | GRCh38.p7 | 3:10025121 | ACTGCACCTGGCTAA[A/T]GTTTAAATTTTTTTG | 2177 |
rs803334 | snp | C/T | 0.000399281 | 0.0141238 | intron-variant | FANCD2 | GRCh38.p7 | 3:10030793 | cctgcctcagcctcc[C/T]gagtagctgagatta | 2177 |
rs803335 | snp | A/C | 0.0905309 | 0.192535 | intron-variant | FANCD2 | GRCh38.p7 | 3:10043351 | ATAAACTTGCACTGT[A/C]GTCTGTCTGGGATTG | 2177 |
rs803336 | snp | A/G | 0.332568 | 0.235971 | intron-variant | FANCD2 | GRCh38.p7 | 3:10054673 | acacggtgaaacccc[A/G]actctactaaaaata | 2177 |
rs803341 | snp | A/G | 0.0611083 | 0.163768 | intron-variant | FANCD2 | GRCh38.p7 | 3:10053361 | caaagtccccagagt[A/G]tgatgttccccttcc | 2177 |
rs803342 | snp | A/T | 0 | 0 | intron-variant | FANCD2, FANCD2OS | GRCh38.p7 | 3:10090444 | aaaaaaaaaaaaaaa[A/T]TCAGCAACTTCCAAG | 2177 |
rs812380 | snp | C/T | | | intron-variant | FANCD2, FANCD2OS | GRCh38.p7 | 3:10083883 | tttttttttttgaga[C/T]ggagtcttgctctgt | 2177 |
rs1008636 | snp | G/T | | | intron-variant | FANCD2, FANCD2OS | GRCh38.p7 | 3:10092684 | aaaaaaaaaaaaaaa[G/T]ACATGAAAGAGGTGG | 2177 |
rs1066724 | snp | A/C/T | 0.000399281 | 0.0141238 | intron-variant | FANCD2 | GRCh38.p7 | 3:10069309 | acccatttttcaatc[A/C/T]gaataattttttttc | 2177 |
rs1151609 | snp | C/G | | | intron-variant | FANCD2 | GRCh38.p7 | 3:10041049 | gtaccaccacgccca[C/G]ctaatttttgtatgt | 2177 |
rs1179924 | snp | C/T | | | intron-variant | FANCD2, FANCD2OS | GRCh38.p7 | 3:10089281 | tttttttttttgaga[C/T]ggagtttcgctcttg | 2177 |
rs1552244 | snp | A/G | 0.381308 | 0.21274 | intron-variant | FANCD2, FANCD2OS | GRCh38.p7 | 3:10093893 | ATGTGGGAGATGGGC[A/G]AGTTGGAGAGAGGAG | 2177 |
rs1642642 | snp | C/G | 0 | 0 | intron-variant | FANCD2 | GRCh38.p7 | 3:10055072 | TGCTAAATGCAAAAG[C/G]TAAGATGTAGAACAA | 2177 |
rs1703145 | snp | A/G | 0 | 0 | intron-variant | FANCD2 | GRCh38.p7 | 3:10036278 | TGGCAGGCTAAAAAA[A/G]AAGACATAGGGAGTT | 2177 |
rs1798959 | snp | A/C/G | 0.5 | 0 | intron-variant | FANCD2 | GRCh38.p7 | 3:10055236 | tggttgtataacatt[A/C/G]tgaatatacttaatg | 2177 |
rs1798960 | snp | A/C | | | intron-variant | FANCD2 | GRCh38.p7 | 3:10055152 | tattttatcaaaatt[A/C]aaaaataaaaTAAAA | 2177 |
rs1798966 | snp | A/G | 0 | 0 | intron-variant | FANCD2 | GRCh38.p7 | 3:10036275 | CAGGCTAAAAAAAAA[A/G]ACATAGGGAGTTAGG | 2177 |
rs1983415 | snp | C/G | 0.267091 | 0.249415 | intron-variant | FANCD2 | GRCh38.p7 | 3:10046275 | AGTCAGGATGGTCTC[C/G]ATCTCCTGACCTTGT | 2177 |
rs1983416 | snp | A/G | 0.0618563 | 0.164627 | intron-variant | FANCD2 | GRCh38.p7 | 3:10046327 | CAAAGTGCTGGGATT[A/G]CAGATGTGAGCCACT | 2177 |
rs2075310 | snp | A/G | 0.459801 | 0.135955 | upstream-variant-2KB, intron-variant | FANCD2, CIDECP | GRCh38.p7 | 3:10025967 | GCAGGCGTTGTGTCA[A/G]TTTGCCTAGGTTCAC | 2177 |
rs2160869 | snp | C/T | 0.333952 | 0.235483 | intron-variant | FANCD2 | GRCh38.p7 | 3:10037571 | TCCAATTTTAGTATA[C/T]GTGCTGCCAAAGCAA | 2177 |
rs2241276 | snp | A/G | 0.0146672 | 0.084371 | intron-variant | FANCD2, FANCD2OS | GRCh38.p7 | 3:10088704 | GTATAAAACAGAACC[A/G]GAGGATCTTAAGATC | 2177 |
rs2272123 | snp | C/T | 0.310632 | 0.242536 | intron-variant | FANCD2, FANCD2OS | GRCh38.p7 | 3:10098431 | TTGGTGACTCTAAGT[C/T]GATGCTGAACATGGT | 2177 |
rs2272124 | snp | A/G | 0.303931 | 0.244114 | intron-variant | FANCD2, FANCD2OS | GRCh38.p7 | 3:10096505 | ACAAAGAATAAGAGT[A/G]GGGGATTATCACTAG | 2177 |
rs2272125 | snp | A/C | 0.30382 | 0.244138 | synonymous-codon, intron-variant | FANCD2, FANCD2OS | GRCh38.p7 | 3:10096385 | GACTCTGCAAACTAA[A/C]AGTTCCAGGGTCTTT | 2177 |
rs2276798 | snp | C/G | 0.00159617 | 0.0282053 | intron-variant | FANCD2 | GRCh38.p7 | 3:10060658 | CCCATTTTGTGCAAA[C/G]ATTTCTAGAATTTTA | 2177 |
rs2287435 | snp | A/C | 0.00398564 | 0.0444627 | intron-variant | FANCD2, FANCD2OS | GRCh38.p7 | 3:10090218 | GGAAGAACCAGGAAC[A/C]AAAAGTAGCTTCCTT | 2177 |
rs2287439 | snp | A/C | 0.115088 | 0.210473 | intron-variant | FANCD2 | GRCh38.p7 | 3:10044132 | TGGCTTCTTTGACTG[A/C]ACCTTGATGTGCTTG | 2177 |
rs2302844 | snp | A/G | 3.36831e-05 | 0.00410371 | intron-variant | FANCD2, FANCD2OS | GRCh38.p7 | 3:10095190 | ATCTTCCTATAACCA[A/G]TAAGTTTATAAATGC | 2177 |
rs2347581 | snp | C/T | | | intron-variant | FANCD2 | GRCh38.p7 | 3:10064196 | AAAAGAGAGAGTGCA[C/T]AAAAAGCACTTAGCA | 2177 |
rs2347582 | snp | A/G | | | intron-variant | FANCD2 | GRCh38.p7 | 3:10064195 | AAAGAGAGAGTGCAT[A/G]AAAAGCACTTAGCAC | 2177 |
rs2347583 | snp | G/T | | | intron-variant | FANCD2 | GRCh38.p7 | 3:10064183 | CATAAAAAGCACTTA[G/T]CACAAGGCCCAGCAC | 2177 |
rs2347584 | snp | C/T | | | intron-variant | FANCD2 | GRCh38.p7 | 3:10064173 | ACTTAGCACAAGGCC[C/T]AGCACAGAATAGGGC | 2177 |
rs2347585 | snp | C/T | 0.0501905 | 0.150254 | intron-variant | FANCD2 | GRCh38.p7 | 3:10064163 | AGGCCCAGCACAGAA[C/T]AGGGCTCTCAGACAG | 2177 |
rs2347586 | snp | C/T | | | intron-variant | FANCD2 | GRCh38.p7 | 3:10064103 | TCTCTTCTTTACTAT[C/T]GTGATTGTTATTAAG | 2177 |
rs2600013 | snp | C/G | 0 | 0 | | | GRCh38.p7 | 3:10101748 | CCTGAGCCAGGGACT[C/G]TGATGGTGTTAGACA | 2177 |
rs2600014 | snp | A/C/G | | | | | GRCh38.p7 | 3:10101700 | GTTAATAAAGACCCC[A/C/G]CTTTAAGAACAAAAT | 2177 |
rs2662144 | snp | A/C | 0 | 0 | intron-variant | FANCD2 | GRCh38.p7 | 3:10061801 | AGAATTCTGACTTCC[A/C]TAGGGTAGGGTAAAG | 2177 |
rs2662145 | snp | A/C | 0.00576364 | 0.0533723 | intron-variant | FANCD2 | GRCh38.p7 | 3:10061615 | AGTGCATATTATGTA[A/C]TAAACATtgttctaa | 2177 |
rs2687893 | snp | A/G | 0.114387 | 0.210022 | intron-variant | FANCD2 | GRCh38.p7 | 3:10047230 | TAAAATAATACAACC[A/G]TTAAATCTATTCCTA | 2177 |
rs3095773 | snp | C/T | | | intron-variant | FANCD2 | GRCh38.p7 | 3:10041071 | gagtagctagaatta[C/T]aagtgcgtaccacca | 2177 |
rs3100098 | snp | A/C | 0.497907 | 0.0322805 | intron-variant | FANCD2 | GRCh38.p7 | 3:10031320 | GAGACGGGGTTTCAC[A/C]ATGTTAGCCAAGATG | 2177 |
rs3105784 | snp | A/G | 0.499382 | 0.017561 | intron-variant | FANCD2 | GRCh38.p7 | 3:10031319 | AGACGGGGTTTCACC[A/G]TGTTAGCCAAGATGG | 2177 |
rs3107667 | snp | A/C | 0.496034 | 0.0443518 | intron-variant | FANCD2 | GRCh38.p7 | 3:10031344 | CCGTCTCTACTAAAA[A/C]TACAAAAAATTAGCC | 2177 |
rs3172417 | snp | C/T | 0.44092 | 0.161398 | utr-variant-3-prime, intron-variant | FANCD2, FANCD2OS | GRCh38.p7 | 3:10101265 | TGACTCTGATTAGAC[C/T]CCAGATAAATTGTTG | 2177 |
rs3732974 | snp | C/G | 0.0131889 | 0.080128 | utr-variant-5-prime | FANCD2 | GRCh38.p7 | 3:10028652 | TGGAAACCATTTTGA[C/G]CAATGTCTTGTGCAC | 2177 |
rs3843378 | snp | C/G/T | 0 | 0 | intron-variant | FANCD2 | GRCh38.p7 | 3:10073491 | AGGAGATTACTCCAA[C/G/T]GCCTAAGAGAGTTTT | 2177 |
rs3846170 | snp | A/T | | | intron-variant, upstream-variant-2KB | FANCD2, CIDECP | GRCh38.p7 | 3:10026746 | GCTTTTCTGGAAGCC[A/T]GATGGTATCGCACGT | 2177 |
rs3846171 | snp | C/G | | | intron-variant, upstream-variant-2KB | FANCD2, CIDECP | GRCh38.p7 | 3:10026747 | CTTTTCTGGAAGCCA[C/G]ATGGTATCGCACGTG | 2177 |
rs3846172 | snp | A/T | | | intron-variant, upstream-variant-2KB | FANCD2, CIDECP | GRCh38.p7 | 3:10026748 | TTTTCTGGAAGCCAG[A/T]TGGTATCGCACGTGT | 2177 |
rs3846173 | snp | G/T | | | intron-variant, upstream-variant-2KB | FANCD2, CIDECP | GRCh38.p7 | 3:10026749 | TTTCTGGAAGCCAGA[G/T]GGTATCGCACGTGTT | 2177 |
rs3846174 | snp | A/G | | | intron-variant, upstream-variant-2KB | FANCD2, CIDECP | GRCh38.p7 | 3:10026751 | TCTGGAAGCCAGATG[A/G]TATCGCACGTGTTAA | 2177 |
rs3846175 | snp | A/T | | | intron-variant, upstream-variant-2KB | FANCD2, CIDECP | GRCh38.p7 | 3:10026752 | CTGGAAGCCAGATGG[A/T]ATCGCACGTGTTAAA | 2177 |
rs3846176 | snp | A/G | | | intron-variant, upstream-variant-2KB | FANCD2, CIDECP | GRCh38.p7 | 3:10026753 | TGGAAGCCAGATGGT[A/G]TCGCACGTGTTAAAG | 2177 |
rs3846177 | snp | G/T | 0.329783 | 0.236927 | intron-variant, upstream-variant-2KB | FANCD2, CIDECP | GRCh38.p7 | 3:10026888 | TTTAGCACAGGGCCC[G/T]GTACCTCGTAAATGT | 2177 |
rs3864015 | snp | C/T | 0.0238492 | 0.106564 | intron-variant | FANCD2 | GRCh38.p7 | 3:10064460 | CTGCTGGCTTGGTTG[C/T]ACTGGTGAAGTTACA | 2177 |
rs3864017 | snp | A/G | 0.26124 | 0.249747 | FANCD2 | 3 | allele_origin=G(germline)/A(germline) | 3:10064848 | TCCTGTGAGGTCACC[A/G]GACCCCCATCTTTTG | 2177 |
rs3895942 | snp | C/G | 0.32955 | 0.237006 | intron-variant | FANCD2 | GRCh38.p7 | 3:10067061 | CAACAACGTGGTATA[C/G]AGAAAAAAAATCTCT | 2177 |
rs3930484 | snp | C/T | 0.0607341 | 0.163335 | intron-variant | FANCD2 | GRCh38.p7 | 3:10046157 | CTCCCGGGTTCACGC[C/T]ATTCTCCTGCCTCAG | 2177 |
rs3936531 | snp | C/T | 0.0418186 | 0.138422 | intron-variant | FANCD2, FANCD2OS | GRCh38.p7 | 3:10085398 | CTTTTTTCTTTCTTT[C/T]TTTTTTTTTTTTGAG | 2177 |
rs4019705 | snp | A/G | 0.00279162 | 0.0372561 | intron-variant | FANCD2 | GRCh38.p7 | 3:10071102 | caaatccccctctgc[A/G]agaaacacccaagaa | 2177 |
rs4019706 | snp | A/G | 0.342358 | 0.232314 | intron-variant | FANCD2 | GRCh38.p7 | 3:10071178 | tggcttttatccaaa[A/G]gacaggcaataacag | 2177 |
rs4019707 | snp | A/G | 0.295343 | 0.245854 | intron-variant | FANCD2 | GRCh38.p7 | 3:10071366 | aaagaaaggaaatca[A/G]tataccaaggagata | 2177 |
rs4019708 | snp | A/C | 0.295343 | 0.245854 | intron-variant | FANCD2 | GRCh38.p7 | 3:10071387 | caaggagatatctgc[A/C]ctcccatgtttattg | 2177 |
rs4019772 | snp | A/G | | | intron-variant | FANCD2 | GRCh38.p7 | 3:10064977 | AAAAAGTTTCTCTCG[A/G]GACAAATGGTATTTG | 2177 |
rs4019779 | snp | C/G | | | intron-variant | FANCD2 | GRCh38.p7 | 3:10064079 | GGCTCTTCTCTGAGG[C/G]CTCCTTCACTTAATA | 2177 |
rs4019780 | snp | C/T | | | intron-variant | FANCD2 | GRCh38.p7 | 3:10064102 | ACTTAATAACAATCA[C/T]GATAGTAAAGAAGAG | 2177 |
rs4019781 | snp | G/T | | | intron-variant | FANCD2 | GRCh38.p7 | 3:10064120 | TAGTAAAGAAGAGAT[G/T]GACTTTGTTAATGAT | 2177 |
rs4019782 | snp | C/T | 1.64803e-05 | 0.00287052 | intron-variant | FANCD2 | GRCh38.p7 | 3:10064682 | GTTTTCCCTGTAGCC[C/T]TGCGTATTCCTGAGC | 2177 |
rs4019783 | snp | A/G | 0.000428491 | 0.0146309 | intron-variant | FANCD2 | GRCh38.p7 | 3:10064702 | TATTCCTGAGCTGCA[A/G]CATCAGATTCTGGTT | 2177 |
rs4019784 | snp | A/C/T | 0.00478114 | 0.0486627 | intron-variant | FANCD2 | GRCh38.p7 | 3:10064724 | ATTCTGGTTTTTCTC[A/C/T]GCAGTGACTTTCCAT | 2177 |
rs4019785 | snp | C/T | 0.169463 | 0.236672 | intron-variant | FANCD2 | GRCh38.p7 | 3:10064924 | TGTTTTGAATGTTCA[C/T]GGGGAATTCCACAGC | 2177 |
rs4019786 | snp | C/T | | | intron-variant | FANCD2 | GRCh38.p7 | 3:10064939 | TGGGGAATTCCACAG[C/T]TCTTGGTGGGGAAGT | 2177 |
rs4019792 | snp | C/T | | | intron-variant | FANCD2 | GRCh38.p7 | 3:10064058 | TTCTGCCCTACCCTG[C/T]CTCACGGCTCTTCTC | 2177 |