SNP - dbSNP |
dbSNP | Type | Alleles | Het | Se(het) | Fxn-class | Gene Name | Assembly | Chr-pos | Sequence | Entrez Gene |
rs1337 | snp | C/G | 0.333591 | 0.235611 | missense, utr-variant-3-prime | RNF175, TLR2 | GRCh38.p7 | 4:153710435 | TTGGCTTCGTTATTT[C/G]GTGGCCTGGCAACCT | 285533 |
rs1339 | snp | A/G | 0.375197 | 0.216393 | missense, utr-variant-3-prime | RNF175, TLR2 | GRCh38.p7 | 4:153710411 | GCAACCTGTGGTGAT[A/G]GGAATAGTTCAAGGC | 285533 |
rs981843 | snp | C/T | 0.173643 | 0.238054 | intron-variant, upstream-variant-2KB | RNF175, LOC105377499 | GRCh38.p7 | 4:153730833 | ATGATAGTTTGGAGC[C/T]ACAGCTGGACTATAT | 285533 |
rs981844 | snp | A/G | 0.173643 | 0.238054 | intron-variant, upstream-variant-2KB | RNF175, LOC105377499 | GRCh38.p7 | 4:153730876 | AGTTCTCTTCCTGTA[A/G]ATCCATAAGTATGAA | 285533 |
rs1036614 | snp | A/C/T | 0.226491 | 0.265572 | intron-variant | RNF175, LOC105377499 | GRCh38.p7 | 4:153717953 | tgtgtgatacgataa[A/C/T]ggtggatatataaca | 285533 |
rs1116636 | snp | C/T | 0.175576 | 0.238665 | intron-variant | RNF175, LOC105377499 | GRCh38.p7 | 4:153735999 | agcaaggacttcctg[C/T]acaatgttgaatagg | 285533 |
rs1371161 | snp | C/T | 0.175897 | 0.238765 | intron-variant | RNF175, LOC105377499 | GRCh38.p7 | 4:153734019 | AAAGTTCATCCATGT[C/T]TTTTCATGACACAAT | 285533 |
rs1439165 | snp | C/T | 0.418974 | 0.184249 | intron-variant | RNF175, LOC105377499 | GRCh38.p7 | 4:153721120 | AGAATCCTGGTATAA[C/T]TGAAATATGATTTAA | 285533 |
rs1439166 | snp | A/G | 0.499104 | 0.0211438 | intron-variant | RNF175, LOC105377499 | GRCh38.p7 | 4:153720337 | TTGGAAATATGCCAC[A/G]TTCTTATTTCCTTAT | 285533 |
rs1439167 | snp | C/T | 0.44638 | 0.154709 | intron-variant | RNF175, LOC105377499 | GRCh38.p7 | 4:153723098 | GTCCACTGTTAATAG[C/T]AATCTTTTAAATTTG | 285533 |
rs1456384 | snp | C/T | 0.0115079 | 0.0749768 | intron-variant | RNF175, LOC105377499 | GRCh38.p7 | 4:153723302 | ATGACCAGGTGAGTG[C/T]GCCAAGCAAGTGCTT | 285533 |
rs1456407 | snp | A/G | 0.0584853 | 0.160693 | intron-variant | RNF175, LOC105377499 | GRCh38.p7 | 4:153742974 | TGTTCAAAGCTCTCA[A/G]TAGCTAGTCTTATAC | 285533 |
rs1530105 | snp | A/G | 0.314301 | 0.241589 | intron-variant | RNF175, LOC105377499 | GRCh38.p7 | 4:153725842 | GTTATGGATGTGTTC[A/G]GTTTTCCAAATCTCA | 285533 |
rs1545603 | snp | C/T | 0.0329836 | 0.124112 | upstream-variant-2KB | RNF175 | GRCh38.p7 | 4:153761577 | ggtgggcattgtgac[C/T]gtccgtgttttacac | 285533 |
rs1545604 | snp | C/T | 0.25912 | 0.249834 | upstream-variant-2KB | RNF175 | GRCh38.p7 | 4:153761581 | GGCATTGTGACCGTC[C/T]GTGTTTTACACGGGA | 285533 |
rs1585110 | snp | C/T | 0.0490535 | 0.14873 | intron-variant | RNF175, LOC105377499 | GRCh38.p7 | 4:153739792 | TCATCTTTGGCTTTC[C/T]GTAGTGTGAATTTGA | 285533 |
rs1598632 | snp | A/G | 0.494526 | 0.0520291 | intron-variant | RNF175, LOC105377499 | GRCh38.p7 | 4:153746230 | AAGAAGAAAGGAGTA[A/G]CAGGCCCCAAGCCAG | 285533 |
rs1801103 | snp | A/C/G/T | | | intron-variant, downstream-variant-500B, upstream-variant-2KB | RNF175, TLR2, LOC105377499 | GRCh38.p7 | 4:153711125 | ACCCTTTGTTAAAGT[A/C/G/T]TCACTTGAGGTGACA | 285533 |
rs1837350 | snp | C/T | 0.440057 | 0.162414 | intron-variant | RNF175, LOC105377499 | GRCh38.p7 | 4:153719114 | GGGGCCTATCGGGAG[C/T]GGGAGGGAGAGCATC | 285533 |
rs1869947 | snp | A/G | 0.378174 | 0.214642 | intron-variant | RNF175, LOC105377499 | GRCh38.p7 | 4:153722351 | TTCTTGCTGTTTTAT[A/G]CCTTTACTTGTCTTT | 285533 |
rs1992254 | snp | A/G | 0.174932 | 0.238463 | intron-variant | RNF175, LOC105377499 | GRCh38.p7 | 4:153739313 | ctgcctcagcctccc[A/G]agtagctgggattac | 285533 |
rs2033830 | snp | C/T | 0.00358779 | 0.0422022 | intron-variant | RNF175, LOC105377499 | GRCh38.p7 | 4:153715167 | AGAAAAAGAGTGAAG[C/T]ATCAGGTGCAGGGGG | 285533 |
rs2118861 | snp | G/T | 0.441841 | 0.160303 | intron-variant | RNF175, LOC105377499 | GRCh38.p7 | 4:153723655 | ATACACAGAAACACA[G/T]GAGCATGATAGTTCT | 285533 |
rs2118862 | snp | A/T | 0.175576 | 0.238665 | intron-variant | RNF175, LOC105377499 | GRCh38.p7 | 4:153736630 | GCACCAAGCCCAGGT[A/T]GTTTCACTGGTAAAT | 285533 |
rs2118863 | snp | A/G | 0.175576 | 0.238665 | intron-variant | RNF175, LOC105377499 | GRCh38.p7 | 4:153736427 | TGAAGACATTACAAG[A/G]AAAGGAAACTGTAGA | 285533 |
rs2124641 | snp | C/T | 0.314301 | 0.241589 | intron-variant | RNF175, LOC105377499 | GRCh38.p7 | 4:153724658 | TAAGATCTATGATAT[C/T]ACTAGCATAAGGTTT | 285533 |
rs2124645 | snp | C/T | 0.495252 | 0.0484902 | intron-variant | RNF175, LOC105377499 | GRCh38.p7 | 4:153737187 | aatattagtaatttg[C/T]gttttctcttttttt | 285533 |
rs2165083 | snp | A/G | 0.00159617 | 0.0282053 | intron-variant | RNF175, LOC105377499 | GRCh38.p7 | 4:153724728 | AACCATGATGTTCAG[A/G]AGGTCCCTTCTGACT | 285533 |
rs2168509 | snp | A/G | 0.0704125 | 0.17392 | intron-variant | RNF175, LOC105377499 | GRCh38.p7 | 4:153724545 | AGTCTTGCTCCAGAT[A/G]TTTAGCCCCACCCTC | 285533 |
rs2168510 | snp | C/T | 0.0704125 | 0.17392 | intron-variant | RNF175, LOC105377499 | GRCh38.p7 | 4:153724564 | AGCCCCACCCTCTCA[C/T]CCCCAAGTCCTGAGC | 285533 |
rs2168511 | snp | C/T | 0.0704125 | 0.17392 | intron-variant | RNF175, LOC105377499 | GRCh38.p7 | 4:153724595 | CCTGTCTCTGACTCT[C/T]TCACCTTCCCCAGCT | 285533 |
rs2251639 | snp | A/G | 0.174288 | 0.23826 | intron-variant | RNF175, LOC105377499 | GRCh38.p7 | 4:153735258 | aatggttgtggaaca[A/G]ctggattttcacacg | 285533 |
rs2251900 | snp | A/G | 0.175254 | 0.238565 | intron-variant | RNF175, LOC105377499 | GRCh38.p7 | 4:153732993 | ATGTTAACTGCTCCT[A/G]TGTGATGTCAAAAGT | 285533 |
rs2251994 | snp | A/G | 0.175254 | 0.238565 | intron-variant | RNF175, LOC105377499 | GRCh38.p7 | 4:153732945 | TTCTTATTTCATGTG[A/G]GATACTACTAAATAC | 285533 |
rs2251997 | snp | A/G | 0.175254 | 0.238565 | intron-variant | RNF175, LOC105377499 | GRCh38.p7 | 4:153732915 | CCTGGATGTTTTCAA[A/G]TAGTCGCATTTTTAG | 285533 |
rs2263434 | snp | C/T | 0.173965 | 0.238157 | intron-variant | RNF175, LOC105377499 | GRCh38.p7 | 4:153737160 | tattataaaagaaaa[C/T]tgggctaggcttagt | 285533 |
rs2263435 | snp | C/T | 0.175576 | 0.238665 | intron-variant | RNF175, LOC105377499 | GRCh38.p7 | 4:153737112 | ccagcacttgggagg[C/T]tgaggtgggaggatc | 285533 |
rs2263436 | snp | A/T | 0.175576 | 0.238665 | intron-variant | RNF175, LOC105377499 | GRCh38.p7 | 4:153737083 | tcacttgaggccaag[A/T]gttcaagaccagcct | 285533 |
rs2289318 | snp | C/G | 0.35689 | 0.225997 | intron-variant, downstream-variant-500B, upstream-variant-2KB | RNF175, LOC105377499 | GRCh38.p7 | 4:153712582 | CTCCCTAACAAGATG[C/G]TTCAGCTTTCATGAA | 285533 |
rs2405430 | snp | C/T | 0.175897 | 0.238765 | intron-variant | RNF175, LOC105377499 | GRCh38.p7 | 4:153737239 | ctttgaaaagatcaa[C/T]aaatctgataaacct | 285533 |
rs2405431 | snp | C/T | 0.174288 | 0.23826 | intron-variant | RNF175, LOC105377499 | GRCh38.p7 | 4:153735244 | agctggattttcaca[C/T]gccaaaaaaaaaaaa | 285533 |
rs2405432 | snp | A/T | 0.0277298 | 0.114438 | missense, utr-variant-3-prime | RNF175, TLR2 | GRCh38.p7 | 4:153710391 | TAGTTCAAGGCATTA[A/T]CTATTCACTAGGGCT | 285533 |
rs2445616 | snp | A/G | 0.5 | 0 | intron-variant, upstream-variant-2KB | RNF175, LOC105377499 | GRCh38.p7 | 4:153731676 | AAGAAAGAGAGAGAG[A/G]GAGGGAGGGAGGAAG | 285533 |
rs2445617 | snp | C/T | 0.494651 | 0.0514399 | intron-variant | RNF175, LOC105377499 | GRCh38.p7 | 4:153737876 | TATGCCTGCTTGATC[C/T]ATCAACTACTAAAAG | 285533 |
rs2579906 | snp | C/T | 0.498547 | 0.0269177 | | | GRCh38.p7 | 4:153738376 | CAACAAAGTGACACC[C/T]TATCTCTACCAAAAA | 285533 |
rs2579907 | snp | C/T | 0.244205 | 0.249933 | | | GRCh38.p7 | 4:153725218 | TCTCTGGCTTCCTTT[C/T]GAGGCCACACAGCCT | 285533 |
rs2579908 | snp | A/G | 0.262159 | 0.249704 | | | GRCh38.p7 | 4:153721546 | TTCCCTGGACATGGA[A/G]GAAAGATACTCTTCA | 285533 |
rs2579909 | snp | A/C | 0.425894 | 0.177655 | | | GRCh38.p7 | 4:153719998 | TTTCATCAAAAAATT[A/C]TTTGTTAATTAATTG | 285533 |
rs2579910 | snp | C/T | 0.480697 | 0.0963277 | | | GRCh38.p7 | 4:153719920 | TTTTAAAATAAAATA[C/T]GCAAATTATTTATGT | 285533 |
rs2579912 | snp | C/T | 0.480775 | 0.0961398 | | | GRCh38.p7 | 4:153719781 | CTATAGTTGATGATG[C/T]ATAAAACAGTTCAGA | 285533 |
rs2579916 | snp | A/C | 0.175576 | 0.238665 | | | GRCh38.p7 | 4:153738820 | ATACCCAGTTAAAAC[A/C]AGAGAAGGCAGAGAG | 285533 |
rs2579917 | snp | A/C | 0.175897 | 0.238765 | | | GRCh38.p7 | 4:153731496 | GGCAGCATCTGATTC[A/C]TCAGGAAATTCCTCC | 285533 |
rs2579918 | snp | A/G | 0.173643 | 0.238054 | | | GRCh38.p7 | 4:153731082 | GAAAATATGGTGCTG[A/G]GTTACATTTTAAAGA | 285533 |
rs2606318 | snp | A/G | 0.0360663 | 0.129354 | | | GRCh38.p7 | 4:153719209 | GAATAGGCAGTCTTC[A/G]GTTTTCTGTTCCTGT | 285533 |
rs2606319 | snp | A/T | 0.480461 | 0.0968913 | | | GRCh38.p7 | 4:153719700 | CTTTTTATATCTTCT[A/T]CTTCTTCAGATGCTA | 285533 |
rs2606320 | snp | C/T | 0.23846 | 0.249734 | | | GRCh38.p7 | 4:153719739 | GACTGGTATTTATAA[C/T]AAGTATTACCCAGAT | 285533 |
rs2606321 | snp | A/G | 0.480853 | 0.0959518 | | | GRCh38.p7 | 4:153719790 | TTTTATGCATCATCA[A/G]CTATAGTTTTTATTT | 285533 |
rs2606322 | snp | G/T | 0.366885 | 0.220993 | | | GRCh38.p7 | 4:153722070 | GTAAAGGGTTGATGA[G/T]CTCTCCTTTTCAATT | 285533 |
rs2606323 | snp | A/G | 0.084364 | 0.187256 | | | GRCh38.p7 | 4:153731142 | TGCTCTGTGAATTCA[A/G]TGATTGCATGGCTAG | 285533 |
rs2606324 | snp | A/G | 0.173643 | 0.238054 | | | GRCh38.p7 | 4:153731295 | CTCATAAATAAACAC[A/G]TGAAATATATGAAAT | 285533 |
rs2606325 | snp | C/T | 0.175897 | 0.238765 | | | GRCh38.p7 | 4:153731529 | AAAGTACCATGGTTT[C/T]TTTGTGTTGCCATGC | 285533 |
rs2606326 | snp | A/G | 0.335272 | 0.235008 | | | GRCh38.p7 | 4:153731685 | AGAGAGGGAGGGAGG[A/G]AGGAAGGAAGGAAGG | 285533 |
rs2606327 | snp | C/T | 0.175254 | 0.238565 | | | GRCh38.p7 | 4:153732477 | AGATTTGAGCAGACA[C/T]AATGCTTTATTGGCC | 285533 |
rs2606328 | snp | C/T | 0.176219 | 0.238865 | | | GRCh38.p7 | 4:153732712 | TACTTGCTGCAGATA[C/T]GGAAAGTAACTGCAC | 285533 |
rs2606329 | snp | A/C | 0.175897 | 0.238765 | | | GRCh38.p7 | 4:153733491 | ACACAGCAGTATGAT[A/C]ATTGTTAATTTGTAT | 285533 |
rs2606330 | snp | A/G | 0.0558544 | 0.157504 | | | GRCh38.p7 | 4:153733612 | ttacttaaagagggg[A/G]cgatacttttcccct | 285533 |
rs2606332 | snp | A/G | 0.176219 | 0.238865 | | | GRCh38.p7 | 4:153734220 | ACTGGGTAAATACCC[A/G]GTAGAGTGATTATAT | 285533 |
rs2606333 | snp | A/G | 0.176219 | 0.238865 | | | GRCh38.p7 | 4:153734801 | CTGCCTCAGCCTCCC[A/G]AGTACCTGGGACTAC | 285533 |
rs2606334 | snp | A/G | 0.176219 | 0.238865 | | | GRCh38.p7 | 4:153734914 | ATCTCCTGACCTAGT[A/G]ATCTGCCCACCTCGG | 285533 |
rs2606335 | snp | C/T | 0.175576 | 0.238665 | | | GRCh38.p7 | 4:153735384 | TTCTGTTCCATTGAC[C/T]TATGTGTCTATTCTT | 285533 |
rs2606336 | snp | C/T | 0.175576 | 0.238665 | | | GRCh38.p7 | 4:153735640 | CTGGACATATTGATA[C/T]TGAATCTTCCAATCT | 285533 |
rs2606337 | snp | C/T | 0.175576 | 0.238665 | | | GRCh38.p7 | 4:153735693 | ATTAATTTATATCTC[C/T]TTTCTCTGTATAGAT | 285533 |
rs2606341 | snp | C/T | 0.175576 | 0.238665 | | | GRCh38.p7 | 4:153737550 | AATTTCTCTGGAGTT[C/T]CTTCTTTGACCCATG | 285533 |
rs2606342 | snp | A/C | 0.175576 | 0.238665 | | | GRCh38.p7 | 4:153738828 | CTTCTCTGGTTTTAA[A/C]TGGGTATTTTATGAG | 285533 |
rs2606343 | snp | A/C | 0.231482 | 0.249313 | | | GRCh38.p7 | 4:153725600 | AGCTCCTGCTCCCAA[A/C]AGCATGCTATGGCTT | 285533 |
rs3068858 | in-del | -/AAA/AAAA | | | intron-variant | RNF175, LOC105377499 | GRCh38.p7 | 4:153735227 | ccaaaaaaaaaaaaa[-/AAA/AAAA]tagacacagacacag | 285533 |
rs3068869 | in-del | -/T | | | intron-variant | RNF175, LOC105377499 | GRCh38.p7 | 4:153722768 | TGTGTTTTTTTTTTT[-/T]GACTTATTAAATGCA | 285533 |
rs3213897 | snp | A/G | | | intron-variant | RNF175, LOC105377499 | GRCh38.p7 | 4:153720139 | TGTATGACACAAAGA[A/G]AAATGGTCTCATCTT | 285533 |
rs3747522 | snp | A/G | 0.474544 | 0.10991 | intron-variant | RNF175, LOC105377499 | GRCh38.p7 | 4:153723777 | CTGCCTCCCCACAGC[A/G]CCCCCTTCTCATTTG | 285533 |
rs4145338 | snp | C/T | 0.320814 | 0.239761 | intron-variant | RNF175, LOC105377499 | GRCh38.p7 | 4:153733171 | CTTGTTAAAAAGTTG[C/T]ATCTGAAAATATTCT | 285533 |
rs4426759 | snp | C/T | 0.495521 | 0.0471118 | intron-variant | RNF175, LOC105377499 | GRCh38.p7 | 4:153728954 | TGGTGCATAAACCTT[C/T]TGTGATCTGTGCCAT | 285533 |
rs4637381 | snp | C/G | 0.494733 | 0.0510469 | intron-variant, nc-transcript-variant | RNF175, LOC105377499 | GRCh38.p7 | 4:153749104 | ATGGGGCTAAAAAAA[C/G]TAATGAGCCCCAGGA | 285533 |
rs4696188 | snp | A/G | 0.0325976 | 0.123435 | utr-variant-5-prime | RNF175 | GRCh38.p7 | 4:153760128 | CCCCGGTTCCTTCAG[A/G]ACCTCAGGCCTCCCA | 285533 |
rs4696189 | snp | C/T | 0.0314385 | 0.121371 | utr-variant-5-prime | RNF175 | GRCh38.p7 | 4:153760175 | CGCCGATAAAGCGTC[C/T]TGAGCCCTACCGGGT | 285533 |
rs4696485 | snp | C/T | 0.202959 | 0.245534 | intron-variant | RNF175, LOC105377499 | GRCh38.p7 | 4:153721149 | CTTTGTGATCATCCC[C/T]CCAGCCAGTTTTTTT | 285533 |
rs4696486 | snp | C/T | 0.477004 | 0.104734 | intron-variant, utr-variant-5-prime | RNF175, LOC105377499 | GRCh38.p7 | 4:153730202 | GTAATCCCAGCAGTT[C/T]GGGAGGCGGGGGTGG | 285533 |
rs4696487 | snp | A/C | 0.199873 | 0.244923 | intron-variant | RNF175, LOC105377499 | GRCh38.p7 | 4:153732924 | CGACTACTTGAAAAC[A/C]TCCAGGTATTTAGTA | 285533 |
rs4696488 | snp | C/G | 0.0603597 | 0.1629 | intron-variant | RNF175 | GRCh38.p7 | 4:153755668 | acatcccccaccccc[C/G]caaaaaaaatgagtt | 285533 |
rs4696489 | snp | A/C | 0.422473 | 0.180978 | intron-variant | RNF175 | GRCh38.p7 | 4:153755670 | atcccccacccccgc[A/C]aaaaaaatgagttct | 285533 |
rs4696490 | snp | A/G | 0.0599851 | 0.162463 | intron-variant | RNF175 | GRCh38.p7 | 4:153757471 | CTTTCTAAACCAAGT[A/G]GCAAAGCCAGAACAA | 285533 |
rs4696491 | snp | C/T | 0.350546 | 0.22889 | intron-variant | RNF175 | GRCh38.p7 | 4:153758713 | TGACCCCTAGGTTTC[C/T]GGCAGTCAGAGTGGA | 285533 |
rs4696492 | snp | A/T | 0.427423 | 0.176128 | intron-variant | RNF175 | GRCh38.p7 | 4:153758829 | CCCTCCATCTAGAAT[A/T]CTCTGGCCCATGAGG | 285533 |
rs4696493 | snp | C/T | 0.427727 | 0.175821 | intron-variant | RNF175 | GRCh38.p7 | 4:153758855 | TGAGGTCAGATCCTG[C/T]CCATTCCCCAACACC | 285533 |
rs5020754 | snp | C/T | 0.281049 | 0.248064 | intron-variant, nc-transcript-variant | RNF175, LOC105377499 | GRCh38.p7 | 4:153749292 | TTTTATTTGTGTCTA[C/T]ATAAGGAATAATTAT | 285533 |
rs5863059 | in-del | -/TG | | | intron-variant | RNF175, LOC105377499 | GRCh38.p7 | 4:153720427 | TTTTTTTTTCATTTA[-/TG]TGTTTGATTTTTCTT | 285533 |
rs6535943 | snp | A/T | 0.261056 | 0.249755 | utr-variant-3-prime | TLR2 | GRCh38.p7 | 4:153707867 | ggatcacctgaggtG[A/T]TGtggtgcctattca | 285533 |
rs6535944 | snp | C/T | 0.0711525 | 0.174681 | intron-variant, downstream-variant-500B, utr-variant-3-prime | RNF175, TLR2 | GRCh38.p7 | 4:153710095 | TGTTATCAGTCAAAC[C/T]GGAAGTAGAATGTCC | 285533 |
rs6535945 | snp | C/T | 0.0707826 | 0.174302 | intron-variant, upstream-variant-2KB | RNF175, LOC105377499 | GRCh38.p7 | 4:153711843 | TTATTCTGTTGCACA[C/T]CTCTGATGTCTATAC | 285533 |
rs6535946 | snp | C/T | 0.0711525 | 0.174681 | intron-variant, nc-transcript-variant | RNF175, LOC105377499 | GRCh38.p7 | 4:153713877 | TCAGGGGCCATTGAG[C/T]CAGCACAGAAATGTC | 285533 |
rs6535947 | snp | G/T | 0.44768 | 0.153045 | intron-variant, nc-transcript-variant | RNF175, LOC105377499 | GRCh38.p7 | 4:153713963 | CACACTGGCAGAACT[G/T]CTGCAGAGCAAGACT | 285533 |