SNP - dbSNP |
dbSNP | Type | Alleles | Het | Se(het) | Fxn-class | Gene Name | Assembly | Chr-pos | Sequence | Entrez Gene |
rs8349 | snp | C/T | 0 | 0 | upstream-variant-2KB, intron-variant | PLPP5, DDHD2 | GRCh38.p7 | 8:38269842 | TGAGATGTTGCCTTT[C/T]TTATTTTACAAATAC | 54904 |
rs13034 | snp | A/G | 0.00998196 | 0.0699381 | missense | WHSC1L1 | GRCh38.p7 | 8:38347615 | TCATGCTTTGATTTC[A/G]TGTGCTCACTTGCCT | 54904 |
rs417256 | snp | C/T | | | intron-variant | WHSC1L1 | GRCh38.p7 | 8:38338117 | ccagcctggccaaca[C/T]agtgaaaccccgtct | 54904 |
rs453029 | snp | A/G | | | intron-variant | WHSC1L1 | GRCh38.p7 | 8:38308642 | tgagcaacacagtaa[A/G]accccatctctacaa | 54904 |
rs747464 | snp | C/T | 0 | 0 | intron-variant | WHSC1L1 | GRCh38.p7 | 8:38305073 | GATTACATTCTAAAT[C/T]CAGACCATGAGAAGA | 54904 |
rs747465 | snp | A/G | 0 | 0 | intron-variant | WHSC1L1 | GRCh38.p7 | 8:38304887 | CAGAGCCAGACTAGG[A/G]AAGAAAAAAATGCTT | 54904 |
rs747466 | snp | A/G | | | intron-variant | WHSC1L1 | GRCh38.p7 | 8:38304884 | AGCCAGACTAGGGAA[A/G]AAAAAAATGCTTTCC | 54904 |
rs747923 | snp | A/C | 0 | 0 | intron-variant | WHSC1L1 | GRCh38.p7 | 8:38304134 | ATGCCAGACCAAAAC[A/C]TTATGATAAAATACA | 54904 |
rs1062321 | snp | C/T | 0 | 0 | intron-variant | WHSC1L1 | GRCh38.p7 | 8:38320619 | ATATTCATAGATGAT[C/T]TGTTTTTTCTGTTAA | 54904 |
rs1488934 | snp | C/T | 0.330947 | 0.236533 | intron-variant | WHSC1L1 | GRCh38.p7 | 8:38276094 | ACAGGTACCCACCTA[C/T]GGGAACAGTATACAA | 54904 |
rs1488935 | snp | A/G | 0.340657 | 0.233032 | intron-variant | WHSC1L1 | GRCh38.p7 | 8:38276275 | ACAAATTAGGGAAAG[A/G]GTCCTGAAGGTCCAG | 54904 |
rs1488936 | snp | A/T | 0.309648 | 0.24278 | intron-variant | WHSC1L1 | GRCh38.p7 | 8:38356221 | TAAAAAAGATAAATC[A/T]ATCAATGAATACTTC | 54904 |
rs1599918 | snp | A/G | 0.333952 | 0.235483 | intron-variant | WHSC1L1 | GRCh38.p7 | 8:38306769 | aaagaaaattaaaat[A/G]tgttcatcttcacta | 54904 |
rs1906672 | snp | A/G | 0.333491 | 0.235646 | intron-variant | DDHD2 | GRCh38.p7 | 8:38272507 | TCTGATTCTTCCCTC[A/G]CAGCAGTGGCGGTCC | 54904 |
rs1975132 | snp | C/G | 0.335788 | 0.23482 | intron-variant | WHSC1L1 | GRCh38.p7 | 8:38360094 | tcaacttcctgggct[C/G]aggtgattctcccac | 54904 |
rs2130033 | snp | C/T | 0.338523 | 0.233803 | intron-variant | WHSC1L1 | GRCh38.p7 | 8:38360223 | GCTGGTCTTGAACTC[C/T]TGGACTCAAGCAATC | 54904 |
rs2171616 | snp | A/T | 0.33875 | 0.233717 | intron-variant | WHSC1L1 | GRCh38.p7 | 8:38305785 | TACCAAAGGAAAGTC[A/T]GATTCCATTAGATAA | 54904 |
rs2234549 | snp | C/T | 0.335788 | 0.23482 | intron-variant | WHSC1L1 | GRCh38.p7 | 8:38330495 | TCCAAAGTCTTCTGA[C/T]TGACTCTGGACCTAG | 54904 |
rs2234550 | snp | G/T | 0 | 0 | intron-variant | WHSC1L1 | GRCh38.p7 | 8:38330455 | GAAACTATAATTCAG[G/T]TCTACCTTTTTTCTC | 54904 |
rs2234551 | snp | A/G | 0.00119737 | 0.0244387 | intron-variant | WHSC1L1 | GRCh38.p7 | 8:38330287 | ACTTGCCCTCTGCCC[A/G]AGATATGGGAGAGAA | 54904 |
rs2234552 | snp | A/C/G | 0.0019181 | 0.0309094 | missense | WHSC1L1 | GRCh38.p7 | 8:38329811 | CATTGAAAATGACTC[A/C/G]AGAAGAAAGAATAGA | 54904 |
rs2234553 | snp | A/G | | | intron-variant | WHSC1L1 | GRCh38.p7 | 8:38327029 | ATTTTTAAAAAAAGT[A/G]TCTTGATCACTTAAT | 54904 |
rs2234554 | snp | C/T | 0 | 0 | intron-variant | WHSC1L1 | GRCh38.p7 | 8:38326879 | ACCTGTTTTGTTGTT[C/T]TTTCTTTTGCCTTAT | 54904 |
rs2234555 | snp | G/T | 0.334412 | 0.235318 | intron-variant | WHSC1L1 | GRCh38.p7 | 8:38321249 | AGAAAAGCAAGGAAT[G/T]TGGTCATATCTTAAT | 54904 |
rs2234556 | snp | A/G | 0.01948 | 0.0967499 | intron-variant | WHSC1L1 | GRCh38.p7 | 8:38321190 | AGTTTTTGTTTGTGT[A/G]TTTAAATCATTTCTT | 54904 |
rs2234557 | snp | C/T | 0.0001154 | 0.00759518 | missense | WHSC1L1 | GRCh38.p7 | 8:38318918 | CAGTTCCTCAGGCTA[C/T]AGTGAAGACTGGATT | 54904 |
rs2234558 | snp | A/C | 0.0615988 | 0.164339 | synonymous-codon | WHSC1L1 | GRCh38.p7 | 8:38318917 | AGTTCCTCAGGCTAC[A/C]GTGAAGACTGGATTA | 54904 |
rs2272677 | snp | A/G | 6.59652e-05 | 0.00574267 | synonymous-codon | WHSC1L1 | GRCh38.p7 | 8:38321141 | GCAACAGAGAAGATC[A/G]ATTAGAACTCGTTCT | 54904 |
rs2280847 | snp | A/C | 0.338296 | 0.233889 | intron-variant | WHSC1L1 | GRCh38.p7 | 8:38318669 | TAAATTGGAGAACAC[A/C]ACGTAGACTTGATAC | 54904 |
rs2468967 | snp | C/T | | | intron-variant | WHSC1L1 | GRCh38.p7 | 8:38362285 | TTTTTAAATGGTTAA[C/T]CCATTTTGTgccccc | 54904 |
rs2468968 | snp | A/G | | | intron-variant | WHSC1L1 | GRCh38.p7 | 8:38367663 | gttgcggtgagctga[A/G]attgtgccactgcac | 54904 |
rs2915666 | snp | A/T | | | intron-variant, upstream-variant-2KB | WHSC1L1, LETM2 | GRCh38.p7 | 8:38381592 | GGAGGAGCAGATGGC[A/T]Aggtggggggtgtgg | 54904 |
rs2915667 | snp | A/G | 0 | 0 | intron-variant | WHSC1L1 | GRCh38.p7 | 8:38376875 | GCCTGTTAAATGGAA[A/G]AGAGATAGTACAACT | 54904 |
rs2932002 | snp | A/C/G | 0.5 | 0 | | | GRCh38.p7 | 8:38273949 | TGCACATTTACATAC[A/C/G]AAAAAAAGAGGCACA | 54904 |
rs2932003 | snp | A/G | 0.0991586 | 0.199366 | intron-variant | WHSC1L1 | GRCh38.p7 | 8:38284248 | ctgtcagcctcaaat[A/G]gcttttcctgtatcc | 54904 |
rs2932004 | snp | C/T | | | intron-variant | WHSC1L1 | GRCh38.p7 | 8:38309301 | ggcaaaaccctggct[C/T]tactaaaaatacaaa | 54904 |
rs2932005 | snp | C/T | 0.497558 | 0.0348586 | intron-variant | WHSC1L1 | GRCh38.p7 | 8:38374356 | ATAAGAAAAAGCACA[C/T]CTATGTAGAAAAATA | 54904 |
rs2932006 | snp | A/G | | | intron-variant, upstream-variant-2KB | WHSC1L1, LETM2 | GRCh38.p7 | 8:38381750 | GCAGcacgcgcgcgc[A/G]cacacacacacacac | 54904 |
rs2936719 | snp | A/G | | | intron-variant, upstream-variant-2KB | WHSC1L1, LETM2 | GRCh38.p7 | 8:38381607 | GAGGGGAGTCCTGAC[A/G]GAGGAGCAGATGGCA | 54904 |
rs2955592 | snp | A/T | | | intron-variant, upstream-variant-2KB | WHSC1L1, LETM2 | GRCh38.p7 | 8:38381591 | tccacaccccccacc[A/T]TGCCATCTGCTCCTC | 54904 |
rs2955594 | snp | C/T | 0.0955749 | 0.196603 | intron-variant | WHSC1L1 | GRCh38.p7 | 8:38340987 | tttttaggtactggg[C/T]ctcactctgttgccc | 54904 |
rs2955595 | snp | A/G | | | intron-variant | WHSC1L1 | GRCh38.p7 | 8:38334586 | tttgtatttttagta[A/G]agacggggtttcact | 54904 |
rs2955988 | snp | A/G | | | intron-variant | WHSC1L1 | GRCh38.p7 | 8:38366084 | TCACACTATCACCCA[A/G]ACTGGCGTGCAGAGG | 54904 |
rs2956728 | snp | C/T | 0.233818 | 0.249476 | intron-variant | WHSC1L1 | GRCh38.p7 | 8:38311181 | TGGCTCCCCAGTGTG[C/T]TAGGATTACAGGCAT | 54904 |
rs2956729 | snp | A/G | 0.00993419 | 0.0697739 | intron-variant | WHSC1L1 | GRCh38.p7 | 8:38313430 | ccttctgcataatgg[A/G]aatcataatagtacc | 54904 |
rs2956730 | snp | A/T | 0 | 0 | intron-variant | WHSC1L1 | GRCh38.p7 | 8:38318353 | AGAAAATACAGATAT[A/T]AGTTTAAGCTTTCTT | 54904 |
rs2956731 | snp | G/T | 0.149999 | 0.229128 | intron-variant | WHSC1L1 | GRCh38.p7 | 8:38333251 | ATTTTAATCTGTATT[G/T]TCAACTTCTTCCCCC | 54904 |
rs2956732 | snp | G/T | | | intron-variant | WHSC1L1 | GRCh38.p7 | 8:38333859 | ggcctgggcgacaga[G/T]cgagactccgtctca | 54904 |
rs2978067 | snp | A/T | 0 | 0 | intron-variant | WHSC1L1 | GRCh38.p7 | 8:38336184 | TGACAAGTTTGTACC[A/T]GTTTCTTTTTCTTTT | 54904 |
rs2978068 | snp | C/G | 0.021333 | 0.101051 | intron-variant | WHSC1L1 | GRCh38.p7 | 8:38327446 | TACTTGAACCTGGGA[C/G]GAGGCAGAGGTTGCA | 54904 |
rs2978069 | snp | G/T | | | intron-variant | WHSC1L1 | GRCh38.p7 | 8:38293883 | caggctgggatgtag[G/T]gatatgatctctgct | 54904 |
rs2978070 | snp | C/T | | | intron-variant | WHSC1L1 | GRCh38.p7 | 8:38277462 | ggtgaaaccccatct[C/T]tactaaaaatacaaa | 54904 |
rs2978074 | snp | C/G/T | | | intron-variant | WHSC1L1 | GRCh38.p7 | 8:38362240 | ATCCAAAACAGAATA[C/G/T]ATTATTACAGTAAgg | 54904 |
rs2978075 | snp | G/T | | | intron-variant | WHSC1L1 | GRCh38.p7 | 8:38362242 | CCAAAACAGAATATA[G/T]TATTACAGTAAggcg | 54904 |
rs2978077 | snp | A/G | 0 | 0 | intron-variant | WHSC1L1 | GRCh38.p7 | 8:38368575 | TCCATTAAGTTATAC[A/G]ACATTTTAGGTGGCT | 54904 |
rs2978078 | snp | C/T | 0.0524604 | 0.153226 | intron-variant | WHSC1L1 | GRCh38.p7 | 8:38369727 | AAAGTGAAGTGGGGA[C/T]AGGAACTCAGATCTC | 54904 |
rs2978079 | snp | A/G | | | intron-variant, upstream-variant-2KB | WHSC1L1, LETM2 | GRCh38.p7 | 8:38381744 | Tacacacgcgcgcgc[A/G]cgcacacacacacac | 54904 |
rs2978080 | snp | C/T | 0.233818 | 0.249476 | upstream-variant-2KB | WHSC1L1, LETM2 | GRCh38.p7 | 8:38382359 | CCGGGAAATGCAGTC[C/T]CTGGTTCGGGACGCT | 54904 |
rs3050695 | in-del | -/TT | | | intron-variant | WHSC1L1 | GRCh38.p7 | 8:38360015 | ttttttttttttttt[-/TT]gagacggtctcacta | 54904 |
rs3215419 | in-del | -/TT | | | intron-variant | WHSC1L1 | GRCh38.p7 | 8:38328982 | GTTATAAAAACCACT[-/TT]GTAATAATTGTACCT | 54904 |
rs3739252 | snp | A/G | 0.350109 | 0.229081 | upstream-variant-2KB, intron-variant | PLPP5, DDHD2 | GRCh38.p7 | 8:38270250 | TAGATCCTGTGAACC[A/G]TTACTTTGCCTAAAT | 54904 |
rs3802250 | snp | A/G | 0 | 0 | intron-variant | WHSC1L1 | GRCh38.p7 | 8:38322285 | CAGCTCTAAAACAAT[A/G]TATTGTTATCAAACT | 54904 |
rs3802320 | snp | A/G | 0.00438332 | 0.0466095 | intron-variant | DDHD2 | GRCh38.p7 | 8:38272898 | CTGCATCTATAATCT[A/G]CAACTTAAAAATATA | 54904 |
rs3802321 | snp | A/G | 0.00755907 | 0.0610114 | intron-variant | WHSC1L1 | GRCh38.p7 | 8:38279439 | CTTCCTCTTATTTAA[A/G]TAAGTTCTTGGGCAT | 54904 |
rs3824289 | snp | A/C | 0.332337 | 0.236052 | intron-variant | DDHD2 | GRCh38.p7 | 8:38272915 | AACTTAAAAATATAT[A/C]AAATAGGTCAACATT | 54904 |
rs3824290 | snp | G/T | 0.106987 | 0.205054 | upstream-variant-2KB, utr-variant-5-prime, intron-variant, nc-transcript-variant | WHSC1L1, LETM2 | GRCh38.p7 | 8:38384112 | TATCTCCAGGAAAGA[G/T]GGATTAAATTGGTCT | 54904 |
rs4476979 | snp | A/G | 0 | 0 | intron-variant | WHSC1L1 | GRCh38.p7 | 8:38279102 | GTCTAATTTGAAACA[A/G]AATGATCTTTCAAAG | 54904 |
rs5891011 | in-del | -/T | 0 | 0 | intron-variant | WHSC1L1 | GRCh38.p7 | 8:38358932 | GTTAATTTTTTTTTT[-/T]AATATGCTCCATTAT | 54904 |
rs6474268 | snp | A/G | 0.338296 | 0.233889 | intron-variant | WHSC1L1 | GRCh38.p7 | 8:38356988 | GCCAGGCATGGTGGT[A/G]CACGCCGGTAATCCC | 54904 |
rs6984464 | snp | A/G | 0.309648 | 0.24278 | intron-variant | WHSC1L1 | GRCh38.p7 | 8:38283861 | taatcctagcacttt[A/G]ggaggctgaggcagg | 54904 |
rs6984502 | snp | C/T | 0.0792508 | 0.182605 | intron-variant | WHSC1L1 | GRCh38.p7 | 8:38333292 | TTACTAGAGAGGAAA[C/T]AAGACAAACATTTTG | 54904 |
rs6985317 | snp | C/T | 0 | 0 | intron-variant | WHSC1L1 | GRCh38.p7 | 8:38314025 | CATCAACATGTTTCC[C/T]AGAAGCACCACCATG | 54904 |
rs6989666 | snp | A/G | 0.14665 | 0.227637 | intron-variant | WHSC1L1 | GRCh38.p7 | 8:38277557 | gctgggattacaggc[A/G]tgagccaccacgccc | 54904 |
rs6993185 | snp | C/G | 0.0799831 | 0.183287 | intron-variant | WHSC1L1 | GRCh38.p7 | 8:38348306 | AAACTAAAATGTTTT[C/G]AACTCAATTTTCATA | 54904 |
rs6994590 | snp | A/G | 0.00636936 | 0.0560724 | intron-variant | WHSC1L1 | GRCh38.p7 | 8:38321707 | AAAAGCAGGAAAAGC[A/G]GGGAAGGCAAAAAAT | 54904 |
rs6995350 | snp | C/G | 0.00199481 | 0.0315187 | intron-variant | WHSC1L1 | GRCh38.p7 | 8:38306364 | ataaacaggacatat[C/G]aatagttctgtaaac | 54904 |
rs6999278 | snp | A/G | 0 | 0 | intron-variant | WHSC1L1 | GRCh38.p7 | 8:38349693 | tatatatatatatat[A/G]tatttattatacttt | 54904 |
rs7015799 | snp | A/T | | | intron-variant | WHSC1L1 | GRCh38.p7 | 8:38377811 | ggtggtgcatgcctg[A/T]aatcccagctactcg | 54904 |
rs7017059 | snp | C/T | 0.0221141 | 0.102801 | intron-variant | WHSC1L1 | GRCh38.p7 | 8:38335321 | AAAACTAAATGTAAA[C/T]ACTTCCTTTGAAATA | 54904 |
rs7463464 | snp | A/G | 0 | 0 | intron-variant | WHSC1L1 | GRCh38.p7 | 8:38353295 | TTTTGGCAAAAATGT[A/G]TAGCTCACAGCAACA | 54904 |
rs7815437 | snp | G/T | | | intron-variant | WHSC1L1 | GRCh38.p7 | 8:38373325 | cctcccttgttcaag[G/T]cattctcctgcctca | 54904 |
rs7815965 | snp | C/T | 0 | 0 | intron-variant | WHSC1L1 | GRCh38.p7 | 8:38306250 | caaacattaaaaaga[C/T]agtaaaaggatatca | 54904 |
rs7820510 | snp | C/T | 0 | 0 | intron-variant | WHSC1L1 | GRCh38.p7 | 8:38309945 | TGGTTTGAAGAATCA[C/T]AGTTCTCACTTCTAA | 54904 |
rs7821392 | snp | C/T | 0.333722 | 0.235565 | intron-variant | WHSC1L1 | GRCh38.p7 | 8:38367831 | AACCAATACAGTTAG[C/T]GACATAGATAGGATT | 54904 |
rs7821484 | snp | C/G | | | intron-variant | WHSC1L1 | GRCh38.p7 | 8:38278064 | ctgcctcagcctccc[C/G]agtagctgggactac | 54904 |
rs7821622 | snp | C/G | | | intron-variant | WHSC1L1 | GRCh38.p7 | 8:38278146 | ggtttcaccgtgtta[C/G]ccaggatggtctcga | 54904 |
rs7823681 | snp | C/T | 0.338976 | 0.23363 | intron-variant | WHSC1L1 | GRCh38.p7 | 8:38285217 | ACTCAATATTTAATA[C/T]CTTAAAATAGACCAC | 54904 |
rs7826912 | snp | A/G | | | intron-variant | WHSC1L1 | GRCh38.p7 | 8:38309586 | tgagcctgggaggtc[A/G]aggctgcagggagct | 54904 |
rs7831049 | snp | A/T | 0.00438332 | 0.0466095 | intron-variant | WHSC1L1 | GRCh38.p7 | 8:38309485 | taaataaataaataa[A/T]taattaaataaaaag | 54904 |
rs7831754 | snp | C/T | | | intron-variant | WHSC1L1 | GRCh38.p7 | 8:38309988 | GTACCAAATAGGTAC[C/T]AAACTAATTTTCATG | 54904 |
rs7831767 | snp | C/T | 0 | 0 | intron-variant | WHSC1L1 | GRCh38.p7 | 8:38310002 | CTAAACTAATTTTCA[C/T]GTCATTAATTAAAAG | 54904 |
rs7832138 | snp | G/T | 0.00199481 | 0.0315187 | intron-variant | WHSC1L1 | GRCh38.p7 | 8:38304292 | gggaaaagattaatc[G/T]tttaatgctccaaac | 54904 |
rs7835269 | snp | C/T | 0 | 0 | intron-variant | WHSC1L1 | GRCh38.p7 | 8:38370242 | ATAAGTTTGCTACAG[C/T]TAACTGTATAGGTAA | 54904 |
rs7835541 | snp | C/T | 0 | 0 | intron-variant | WHSC1L1 | GRCh38.p7 | 8:38310222 | tacaaccctggtgac[C/T]actgttctaagaatt | 54904 |
rs7837189 | snp | C/T | 0.331642 | 0.236293 | intron-variant | WHSC1L1 | GRCh38.p7 | 8:38290322 | GAAATGTATTTTAAA[C/T]CTGGTTCTAATGTGA | 54904 |
rs7838788 | snp | C/G | | | intron-variant | WHSC1L1 | GRCh38.p7 | 8:38373294 | gtggcgcaatcttgg[C/G]tctctacaacctacg | 54904 |
rs7839377 | snp | C/T | | | intron-variant | WHSC1L1 | GRCh38.p7 | 8:38306303 | gaaaatttagatgaa[C/T]ggacagattcctaga | 54904 |
rs7839388 | snp | C/T | 0.000399281 | 0.0141238 | intron-variant | WHSC1L1 | GRCh38.p7 | 8:38306332 | gaaaaaaagaactta[C/T]gaacaatggcacaaa | 54904 |
rs7841197 | snp | A/G | 0 | 0 | intron-variant | WHSC1L1 | GRCh38.p7 | 8:38309805 | CTTTCCAGAAATCAC[A/G]TTTGACTTAAATAAT | 54904 |
rs7841617 | snp | A/G | 0.333722 | 0.235565 | intron-variant | WHSC1L1 | GRCh38.p7 | 8:38310131 | cacattgttaccact[A/G]tctgcctccagaaca | 54904 |