iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

SNP - dbSNP
dbSNP	Type	Alleles	Het	Se(het)	Fxn-class	Gene Name	Assembly	Chr-pos	Sequence	Entrez Gene
rs3370	snp	C/T			utr-variant-3-prime, nc-transcript-variant	PEX10, RER1	GRCh38.p7	1:2405071	GACGCACAGAGAGGT[C/T]TCTTCCTGACCCAGA	5192
rs1129171	snp	A/G	0.425123	0.178415	utr-variant-3-prime, downstream-variant-500B, nc-transcript-variant	PEX10, RER1	GRCh38.p7	1:2405593	GCTGTCCCTGGCTGC[A/G]CTTTCTCAGCCCTGG	5192
rs1129332	snp	A/G	0.367913	0.220446	downstream-variant-500B, utr-variant-3-prime	PEX10, RER1	GRCh38.p7	1:2404771	GAGATTTCCTGAAGC[A/G]CAGTGTTAAAATGCC	5192
rs1143016	snp	C/T	0.10084	0.200627	PEX10	1	allele_origin=T(germline)/C(germline)	1:2408773	CTCGCTGCGCCGTGG[C/T]GTGCTGGTGACGCTG	5192
rs1143017	snp	A/C/G	5.31307e-05	0.00515389	utr-variant-3-prime, downstream-variant-500B, nc-transcript-variant	PEX10, RER1	GRCh38.p7	1:2405718	CCTCTACGGGAGTCT[A/C/G]AACGCCAAGATTTAG	5192
rs2494426	snp	C/G	0.354235	0.227234	intron-variant	PEX10	GRCh38.p7	1:2406098	AGCTGACACAGCCCA[C/G]GAAGCCCAGCTCCTG	5192
rs2494427	snp	C/T	0.353371	0.227628	intron-variant	PEX10	GRCh38.p7	1:2407130	GACCAGCCTTGGCAT[C/T]ACCAGTGCAGAAAGA	5192
rs2494428	snp	C/T	0.373196	0.217538	intron-variant	PEX10	GRCh38.p7	1:2407635	AAACCACATCAAATA[C/T]GCAAGTGAGGCTGGG	5192
rs2494429	snp	A/G	0.370162	0.219229	intron-variant	PEX10	GRCh38.p7	1:2407956	ATAGGCAGAGGTGCC[A/G]ACGGCTGTGGAGGGG	5192
rs2494430	snp	C/T	0.031825	0.122064	upstream-variant-2KB, intron-variant	PEX10, PLCH2	GRCh38.p7	1:2414064	ACCCGGCATCGCCCA[C/T]GTGGAGCCGCTGAGG	5192
rs2494593	snp	A/G	0.0763149	0.179815	upstream-variant-2KB, intron-variant	PLCH2	GRCh38.p7	1:2414732	CCGCCCCACCTCCCT[A/G]AGACCCCCTCCAGGC	5192
rs2494595	snp	C/T	0.21695	0.247806	upstream-variant-2KB, intron-variant	PEX10, PLCH2	GRCh38.p7	1:2413252	GAACCACGCGGCGGC[C/T]TCCCGGCTGCCCCCC	5192
rs2494597	snp	A/G	0.208779	0.246578	intron-variant, upstream-variant-2KB	PEX10, PLCH2	GRCh38.p7	1:2411755	AGCCCAGGAGTTTGA[A/G]ACCAGCCTGGGCAAC	5192
rs2494598	snp	A/G	0.352672	0.227954	PEX10	1	allele_origin=G(germline)/A(germline)	1:2408761	TGGCGTGCTGGTGAC[A/G]CTGCATGCCGTCCTG	5192
rs2494599	snp	A/G	0.286825	0.247273	intron-variant	PEX10	GRCh38.p7	1:2407676	CTCGTCGCAGAGCCA[A/G]TGGTCAGGTCTTCGT	5192
rs3795269	snp	G/T	0.486432	0.0812835	intron-variant, downstream-variant-500B	PEX10	GRCh38.p7	1:2406687	ACATGGGGGCTGGGG[G/T]TGTCCTGGGCACTTC	5192
rs3795270	snp	A/G	0.103038	0.202251	utr-variant-3-prime, downstream-variant-500B, nc-transcript-variant	PEX10, RER1	GRCh38.p7	1:2405755	GCTGAGCCGGCGCCC[A/G]GGTGGGCCTGGACAC	5192
rs3820009	snp	C/T	0.00676609	0.0577691	intron-variant, downstream-variant-500B	PEX10, RER1	GRCh38.p7	1:2405893	GAAAAGAAATGCCGA[C/T]GGGGATGGGCATGGC	5192
rs4648634	snp	C/T	0.436123	0.166908	intron-variant	PEX10	GRCh38.p7	1:2407988	GAAGGTGGGAACGGC[C/T]GTCTGATGGGGCAGA	5192
rs4648839	snp	C/T	0.181978	0.240568	upstream-variant-2KB, intron-variant	PLCH2	GRCh38.p7	1:2415043	GCAGTGGCGGGATCT[C/T]GGCTCACTGCAAGCT	5192
rs6671420	snp	A/G	0.448963	0.151372	intron-variant	PEX10	GRCh38.p7	1:2407440	CAGCCAGACAGCCTC[A/G]GCCCAGGGCCGGGAA	5192
rs6671730	snp	A/G	0.449726	0.150364	intron-variant	PEX10	GRCh38.p7	1:2407700	CGACGAGGTCACGGT[A/G]GCCTCCTGTTTAGGG	5192
rs7556447	snp	C/G	0.260227	0.249791	upstream-variant-2KB, intron-variant	PLCH2	GRCh38.p7	1:2414660	GAATCGAATCTAGAT[C/G]AGAACCACTGGCGAA	5192
rs9424320	snp	C/T	0.217851	0.247924	upstream-variant-2KB, intron-variant	PEX10, PLCH2	GRCh38.p7	1:2413486	GCCCTGAGCTGGGGG[C/T]GGGAAGGGCTGGGGC	5192
rs10910064	snp	C/G	0.0174175	0.0916809	intron-variant, upstream-variant-2KB	PEX10, PLCH2	GRCh38.p7	1:2410513	CTGAGGATGAGGGAC[C/G]ACAGTCCTCCCCCAG	5192
rs10910065	snp	C/G	0.368529	0.220116	upstream-variant-2KB, intron-variant	PLCH2	GRCh38.p7	1:2415084	ggttcgcaccattct[C/G]ttgcctcagcctcct	5192
rs10910066	snp	C/T	0.367708	0.220556	upstream-variant-2KB, intron-variant	PLCH2	GRCh38.p7	1:2415085	gttcgcaccattctg[C/T]tgcctcagcctcctg	5192
rs11544146	snp	G/T			missense, nc-transcript-variant	PEX10	GRCh38.p7	1:2408801	TGGACCCATCGCGGA[G/T]ACATGTGCCCTCCTC	5192
rs11544147	snp	C/G			utr-variant-3-prime, nc-transcript-variant	PEX10, RER1	GRCh38.p7	1:2405337	GCCAGCCTCCGTGCC[C/G]CACCCCACCCAGCAC	5192
rs11586985	snp	C/T	0.259134	0.249833	intron-variant, downstream-variant-500B	PEX10, RER1	GRCh38.p7	1:2405838	GGGACACTCCGCCTG[C/T]GGAGAGGAGAAAGGG	5192
rs11808033	snp	A/G	0.00557542	0.0525036	intron-variant	PEX10	GRCh38.p7	1:2407226	AAGGAGGCGGGGAGC[A/G]GAAATGTGGGGCTGC	5192
rs11811122	snp	G/T	0.117886	0.21224	upstream-variant-2KB, intron-variant	PEX10, PLCH2	GRCh38.p7	1:2414527	CTTCCTGAGGGCGAC[G/T]TGAATACGGCGGTCC	5192
rs11811535	snp	C/T	0.0452528	0.143452	upstream-variant-2KB, intron-variant	PLCH2	GRCh38.p7	1:2415135	gcccgccaccacgcc[C/T]ggctaattttttgta	5192
rs12083799	snp	C/G	0.0174175	0.0916809	intron-variant	PEX10	GRCh38.p7	1:2406115	AAGCCCAGCTCCTGG[C/G]AAAGCGTGCGCTCTC	5192
rs12085089	snp	C/G	0.436123	0.166908	downstream-variant-500B, utr-variant-3-prime	PEX10, RER1	GRCh38.p7	1:2404530	CTGCCCACCCGGCCG[C/G]AGCCCCCAGTGCCTC	5192
rs12089619	snp	A/G	0.0174175	0.0916809	intron-variant, upstream-variant-2KB	PEX10, PLCH2	GRCh38.p7	1:2411894	CCTGGCTGAGCCTAC[A/G]CTGGGGTCAGCAGGG	5192
rs12092052	snp	C/T	0.41441	0.188333	intron-variant	PEX10	GRCh38.p7	1:2409065	AGCACATGACAGGCC[C/T]GGCCAATGGCTGCCC	5192
rs34134106	in-del	-/T			upstream-variant-2KB, intron-variant	PLCH2	GRCh38.p7	1:2414992	TTTTTTTTTTTTTTT[-/T]GAGACAGAGTCTCGC	5192
rs34154371	snp	A/G	0.0374363	0.131593	PEX10	1	allele_origin=G(germline)/A(germline)	1:2406576	AGAAACCCCCTGTGC[A/G]CCCTGTGCCTGGAGG	5192
rs34301537	in-del	-/G			intron-variant	PEX10	GRCh38.p7	1:2408095	CTATGTCACTGCTGT[-/G]GGGGAACAAACAGCT	5192
rs34997431	snp	C/T			intron-variant	PEX10	GRCh38.p7	1:2407713	GCCTCCACACACACC[C/T]TAAACAGGAGGCCAC	5192
rs35082957	snp	A/G	0.00472588	0.0483798	PEX10	1	allele_origin=G(germline)/A(unknown)	1:2406553	CCTGGAGGAGCGCAG[A/G]CACCCAACAGCCACG	5192
rs35190685	in-del	-/C			upstream-variant-2KB, intron-variant	PEX10, PLCH2	GRCh38.p7	1:2414426	AAGGCCCAGCCAAGG[-/C]CTAGAGCCAAGGCTT	5192
rs35373002	in-del	-/C			intron-variant	PEX10	GRCh38.p7	1:2408385	CACTGGACTTGGGTG[-/C]CATGCACAGAGCTGG	5192
rs35426403	snp	C/T	0.00318256	0.0397637	PEX10	1	allele_origin=T(germline)/C(unknown)	1:2408720	TGGACAAGGCCCTGC[C/T]CCCCCTGGAGCAGGA	5192
rs35832275	in-del	-/C			utr-variant-3-prime, downstream-variant-500B, nc-transcript-variant	PEX10, RER1	GRCh38.p7	1:2405583	GCTGCGCTTTCTCAG[-/C]CCTGGGAGGGGCGCC	5192
rs35859093	in-del	-/C			utr-variant-3-prime, nc-transcript-variant	PEX10, RER1	GRCh38.p7	1:2405009	GGGCTGCCAGGGGCG[-/C]CCCGAGCCCTCTCCT	5192
rs36083229	in-del	-/C			upstream-variant-2KB, intron-variant	PEX10, PLCH2	GRCh38.p7	1:2414397	TTGAACCGTGGGGGA[-/C]CCCCCAAGCCCCACC	5192
rs41300094	snp	C/T	0.000195981	0.00989707	utr-variant-3-prime, downstream-variant-500B, nc-transcript-variant	PEX10, RER1	GRCh38.p7	1:2405714	GAGACTAAATCTTGG[C/T]GTTCAGACTCCCGTA	5192
rs41310349	snp	C/G	0.00398564	0.0444627	utr-variant-3-prime, nc-transcript-variant	PEX10, RER1	GRCh38.p7	1:2405080	GGAAGAGACCTCTCT[C/G]TGCGTCTCAGGCTGA	5192
rs41315652	snp	A/G	0.0128859	0.0792269	intron-variant	PEX10	GRCh38.p7	1:2410477	AAACAGTATTAGTCC[A/G]GGGGAGCTGGTGGGC	5192
rs55746053	snp	A/G	0.0166325	0.0896639	intron-variant	PEX10	GRCh38.p7	1:2406121	AGCTCCTGGGAAAGC[A/G]TGCGCTCTCACCCTG	5192
rs55868349	snp	C/G	0.0970103	0.197722	upstream-variant-2KB, intron-variant	PLCH2	GRCh38.p7	1:2415176	AGACGGGGTTTCACC[C/G]TGTTAGCCAGGATGG	5192
rs57464405	snp	A/G			intron-variant	PEX10	GRCh38.p7	1:2407888	TGGTGGTGGGACCAC[A/G]GGGGAGGCTTCGTTG	5192
rs58178170	snp	A/C/G	0.5	0	intron-variant	PEX10	GRCh38.p7	1:2407847	GGCTCTGGTGGGCCA[A/C/G]GGACTAACGCTGTGG	5192
rs58827215	snp	A/G	0.0803491	0.183626	intron-variant	PEX10	GRCh38.p7	1:2407219	CTCAGAAAAGGAGGC[A/G]GGGAGCGGAAATGTG	5192
rs58886116	snp	C/T	0.0770498	0.180522	downstream-variant-500B, utr-variant-3-prime	PEX10, RER1	GRCh38.p7	1:2404434	CGCTCAGGCCTAAGG[C/T]GTGACAGGAAGTCGC	5192
rs61373429	snp	G/T	0.0252325	0.109451	intron-variant	PEX10	GRCh38.p7	1:2407776	CAGTGCAGCTCTAGG[G/T]ACAAAAGGAAGGGGG	5192
rs61736380	snp	C/G/T	0.00296127	0.0383667	missense, downstream-variant-500B, nc-transcript-variant	PEX10	GRCh38.p7	1:2406784	GCCGCTGCCTGAAAC[C/G/T]GTACAGCTGCAGCCC	5192
rs61750432	snp	A/G			missense, upstream-variant-2KB, nc-transcript-variant	PEX10, PLCH2	GRCh38.p7	1:2412451	CGCGCGGCGCAGAAG[A/G]ACGAGTACTACCGCG	5192
rs61750434	snp	C/T	0.000153988	0.00877328	PEX10	1	allele_origin=T(germline)/C(germline)	1:2408679	GACCCCGACAGTGGG[C/T]GACCCTTGCAGGGGA	5192
rs61750435	in-del	-/A	4.27954e-05	0.00462557	PEX10	1	allele_origin=A(germline)/+.-----(germline)	1:2406791	GTCCATGGGGCTGCA[-/A]GCTGTACGGTTTCAG	5192
rs61752092	snp	C/G/T	4.44148e-05	0.00471227	PEX10	1	allele_origin=T(germline)/C(germline)	1:2406766	TTCAGGCAGCGGCAG[C/G/T]GAGCCAGGAAGGAGT	5192
rs61752093	in-del	-/CT	0.000101198	0.00711259	PEX10	1	allele_origin=C(unknown)/+.-----(germline)	1:2406581	GTTTCCAGAAACCCC[-/CT]GTGCACCCTGTGCCT	5192
rs61752094	snp	C/G			missense, downstream-variant-500B, nc-transcript-variant	PEX10	GRCh38.p7	1:2406528	GCCACGCCCTGCGGC[C/G]ACCTGTTCTGCTGGG	5192
rs61752095	snp	C/G			missense, downstream-variant-500B, nc-transcript-variant	PEX10	GRCh38.p7	1:2406526	CACGCCCTGCGGCCA[C/G]CTGTTCTGCTGGGAG	5192
rs61752096	snp	A/G	5.06359e-05	0.00503144	PEX10	1	allele_origin=G(germline)/A(unknown)	1:2406515	GCCACCTGTTCTGCT[A/G]GGAGTGCATCACCGC	5192
rs61760854	snp	C/T	0.29175	0.246489	intron-variant	PEX10	GRCh38.p7	1:2409621	CCTCTCCCCTGCCCA[C/T]GTCCCTGGAATGCCC	5192
rs62636524	in-del	-/G	8.83561e-05	0.00664607	PEX10, PLCH2	1	allele_origin=G(unknown)/+.-----(germline)	1:2412499	GAACCCGCGGCCATG[-/G]CCCCGGCCGCCGCCA	5192
rs62641225	snp	A/G/T	1.68547e-05	0.00290294	PEX10	1	allele_origin=G(germline)/T(unknown)	1:2406561	ACCCTGTGCCTGGAG[A/G/T]AGCGCAGGCACCCAA	5192
rs66876402	multinucleotide-polymorphism	CC/GT	0.5	0	upstream-variant-2KB, intron-variant	PLCH2	GRCh38.p7	1:2415084	GGTTCGCACCATTCT[CC/GT]TGCCTCAGCCTCCTG	5192
rs72642194	snp	C/G	0.000399281	0.0141238	intron-variant, downstream-variant-500B	PEX10, RER1	GRCh38.p7	1:2405920	TTTCCTGTCCACATT[C/G]TCTGCACATGACACA	5192
rs72642195	snp	G/T	0.000798403	0.0199641	intron-variant	PEX10	GRCh38.p7	1:2405949	CACAACATAAATGTT[G/T]TATTTCCTTCAACTA	5192
rs72642198	snp	C/T	0.15698	0.23205	intron-variant, upstream-variant-2KB	PEX10, PLCH2	GRCh38.p7	1:2411128	TTGGCCACGACACCC[C/T]CACCACTGGGCTCTA	5192
rs72642199	snp	A/G	0.00119737	0.0244387	upstream-variant-2KB, intron-variant	PLCH2	GRCh38.p7	1:2415313	AACCACAGGCATTGG[A/G]CAGAAGTGGCCAACA	5192
rs72924936	snp	C/T	0.000798403	0.0199641	downstream-variant-500B, utr-variant-3-prime	PEX10, RER1	GRCh38.p7	1:2404303	CTTGTGTGTCCCTGA[C/T]CCAAGATAGCCAGTG	5192
rs72924937	snp	C/T	0.00597247	0.0543191	utr-variant-3-prime, nc-transcript-variant	PEX10, RER1	GRCh38.p7	1:2405171	GCCAAATGCTTCCGA[C/T]GGAGGTGCTGGCCTT	5192
rs74049248	snp	A/G	0.0792508	0.182605	downstream-variant-500B, utr-variant-3-prime	PEX10, RER1	GRCh38.p7	1:2404432	AGCGCTCAGGCCTAA[A/G]GTGTGACAGGAAGTC	5192
rs75124172	snp	C/T	0.00755907	0.0610114	intron-variant	PEX10	GRCh38.p7	1:2407703	CGAGGTCACGGTGGC[C/T]TCCTGTTTAGGGTGT	5192
rs75377471	snp	A/G	0.000322015	0.0126848	synonymous-codon, nc-transcript-variant	PEX10	GRCh38.p7	1:2408497	GTGGTAGAAGACACC[A/G]TGGATGTAAAACCAG	5192
rs75437503	snp	A/G	0.0279526	0.114869	intron-variant	PEX10	GRCh38.p7	1:2405964	GTATTTCCTTCAACT[A/G]ATGACCAAGAAAGCC	5192
rs75668279	snp	C/T	0.00318978	0.0398085	intron-variant	PEX10	GRCh38.p7	1:2410046	CAGGGCACTGTCACA[C/T]GGGCACTGCACCCTA	5192
rs76232811	snp	A/G	0.117188	0.211804	intron-variant	PEX10	GRCh38.p7	1:2408170	CGGGGCCCCCCGGTC[A/G]GTAAAGAGCTAAGCG	5192
rs76530653	snp	C/G	0.000671488	0.018311	missense, nc-transcript-variant	PEX10	GRCh38.p7	1:2408634	TCCAGCGCCGCGCCC[C/G]TGAGCAGCCACGCCC	5192
rs77098501	in-del	-/T			intron-variant, upstream-variant-2KB	PEX10, PLCH2	GRCh38.p7	1:2411535	ACCACACCCGGCATC[-/T]TTTTTTTTTCGTTTT	5192
rs77398469	snp	A/C	0.00279162	0.0372561	intron-variant, upstream-variant-2KB	PEX10, PLCH2	GRCh38.p7	1:2410994	AATTCTCATCATGTC[A/C]CTCTCCTGTTCAGAA	5192
rs77530733	snp	A/G	0.0158469	0.0875917	intron-variant, upstream-variant-2KB	PEX10, PLCH2	GRCh38.p7	1:2412054	GAAGCACTTGCCAAG[A/G]CCTCACACCTGGAGG	5192
rs77818102	snp	A/G	0.0168055	0.0901129	utr-variant-3-prime, nc-transcript-variant	PEX10, RER1	GRCh38.p7	1:2405084	GAGACCTCTCTGTGC[A/G]TCTCAGGCTGAGATG	5192
rs77863194	snp	A/G	0.00755907	0.0610114	utr-variant-3-prime, nc-transcript-variant	PEX10, RER1	GRCh38.p7	1:2405090	TCTCTGTGCGTCTCA[A/G]GCTGAGATGCAGATT	5192
rs78277543	snp	A/C/G	0.004783	0.0487016	intron-variant	PEX10	GRCh38.p7	1:2409754	GCTGCTTGCTCTGCC[A/C/G]GTCTGGAAAATGCTC	5192
rs78620392	snp	A/G	0.000542106	0.0164548	missense, downstream-variant-500B, nc-transcript-variant	PEX10	GRCh38.p7	1:2406500	TTGCTGCTGCACCAC[A/G]CGGTGATGCACTCCC	5192
rs79073409	snp	A/G	0.0174175	0.0916809	downstream-variant-500B, utr-variant-3-prime	PEX10, RER1	GRCh38.p7	1:2404674	CAAACAGCAAGACAT[A/G]GTTTGCGCGGGTCTT	5192
rs79338697	snp	G/T	0.126909	0.217598	intron-variant	PEX10	GRCh38.p7	1:2408134	GGGCCCAGGTTCAGG[G/T]ATCTGTGGTGAGGCG	5192
rs111376812	snp	A/C			intron-variant	PEX10	GRCh38.p7	1:2406966	GCCTGCTGGGAGGGT[A/C]ACACGTTCAGTTGGC	5192
rs111413105	snp	C/G	0.00835141	0.0640778	upstream-variant-2KB, utr-variant-5-prime, missense, nc-transcript-variant	PEX10, PLCH2	GRCh38.p7	1:2412603	TCTGCGTGCGGCGCA[C/G]ACCTCTGCGTCAAGG	5192
rs111500533	snp	C/T	0.00159617	0.0282053	downstream-variant-500B, utr-variant-3-prime	PEX10, RER1	GRCh38.p7	1:2404453	ACAGGAAGTCGCACG[C/T]GCTTGGCCAGAGCAC	5192
rs111515011	snp	A/T	0.00636936	0.0560724	intron-variant	PEX10	GRCh38.p7	1:2409838	TGTGACGCAGCCACA[A/T]CTGTCTCCCGCCCAC	5192
rs112094671	snp	C/T			intron-variant	PEX10	GRCh38.p7	1:2407482	GGTGGCAGGTCACAC[C/T]GCCAGCATGGGCCCT	5192
rs112163061	snp	C/T	0.5	0	missense, nc-transcript-variant	PEX10	GRCh38.p7	1:2410442	CTCCACTCCAGCCAC[C/T]TCCTCGCACCTGAGA	5192
rs112471479	snp	C/G	0.0337757	0.125487	synonymous-codon, utr-variant-5-prime, nc-transcript-variant	PEX10, PLCH2	GRCh38.p7	1:2412497	GCTGGCGGCGGCCGG[C/G]GCCATGGCCGCGGGT	5192

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