SNP - dbSNP |
dbSNP | Type | Alleles | Het | Se(het) | Fxn-class | Gene Name | Assembly | Chr-pos | Sequence | Entrez Gene |
rs2936 | snp | A/G | 0.272511 | 0.248984 | utr-variant-3-prime | STC1 | GRCh38.p7 | 8:23844707 | GGTGTTGACACACCA[A/G]TTTTGAGTGTACTGT | 6781 |
rs61053 | snp | G/T | 0.469937 | 0.118861 | intron-variant | STC1 | GRCh38.p7 | 8:23846782 | GCACAGAGGAACATT[G/T]TCCAACTCTTTGGAA | 6781 |
rs167458 | snp | C/G/T | 0.000399281 | 0.0141238 | intron-variant | STC1 | GRCh38.p7 | 8:23854199 | AACGAAGAAGCTGGA[C/G/T]GCTCTGCTGAGGGTA | 6781 |
rs183385 | snp | A/G | 0.00199481 | 0.0315187 | intron-variant | STC1 | GRCh38.p7 | 8:23851870 | TCTGCATGACCTAGC[A/G]TACTAGCTTTTGATC | 6781 |
rs310311 | snp | C/G | 0.49168 | 0.063958 | downstream-variant-500B | STC1 | GRCh38.p7 | 8:23841808 | ACTTAAACAATATGT[C/G]AAATTTACATATTGA | 6781 |
rs310312 | snp | C/T | | | utr-variant-3-prime | STC1 | GRCh38.p7 | 8:23842002 | ATTATGCTATGGCAT[C/T]TTTAATTATAAAAAT | 6781 |
rs310313 | snp | A/T | | | intron-variant | STC1 | GRCh38.p7 | 8:23845751 | TAGTCAGAAGGCCAA[A/T]TCCTAGGCAAGAAGT | 6781 |
rs310314 | snp | A/C | 0 | 0 | intron-variant | STC1 | GRCh38.p7 | 8:23846644 | TCACCCTTCTGTGGC[A/C]CAGCAGAAGGAAGCT | 6781 |
rs310328 | snp | A/G | 0 | 0 | intron-variant | STC1 | GRCh38.p7 | 8:23853102 | TTCCAGTCTTGCATA[A/G]GGAGGCCTTGGCCTG | 6781 |
rs310329 | snp | C/T | | | intron-variant | STC1 | GRCh38.p7 | 8:23853261 | TGCCATAGGATTCTC[C/T]TCTGAGATCAAAAGC | 6781 |
rs423432 | snp | A/G | 0.45946 | 0.136478 | intron-variant | STC1 | GRCh38.p7 | 8:23849534 | ATTAGAAGAAATAAT[A/G]GCCTGGTTAAAAATT | 6781 |
rs433613 | snp | G/T | | | utr-variant-5-prime | STC1 | GRCh38.p7 | 8:23854703 | gctgccaccggtgcc[G/T]ccgctgctgctgctg | 6781 |
rs578094 | snp | C/G | 0.440057 | 0.162414 | intron-variant | STC1 | GRCh38.p7 | 8:23852592 | CTGGAGTACATGATG[C/G]ACAGGGAGGGAGTTC | 6781 |
rs724582 | snp | A/G | 0.27278 | 0.24896 | intron-variant | STC1 | GRCh38.p7 | 8:23846905 | CCAGCAGCTTCTGAC[A/G]TCTACACACCCATAT | 6781 |
rs724583 | snp | A/G | 0 | 0 | intron-variant | STC1 | GRCh38.p7 | 8:23846941 | TCCAGGCATCACCTG[A/G]CTCTTGGGCTCTGCT | 6781 |
rs1062998 | snp | C/T | 0.27278 | 0.24896 | utr-variant-3-prime | STC1 | GRCh38.p7 | 8:23844559 | ACAAAATCCATGTGA[C/T]CATTCTGCCTCTCCT | 6781 |
rs1063000 | snp | C/T | | | utr-variant-3-prime | STC1 | GRCh38.p7 | 8:23843048 | GAAACTATTGGTGCT[C/T]GACTCTCACTAGGCT | 6781 |
rs1138396 | snp | C/T | | | utr-variant-3-prime | STC1 | GRCh38.p7 | 8:23841963 | TTTGGTGAATTCCTT[C/T]TAAGATAAAAATAAT | 6781 |
rs1347547 | snp | A/G | 0.0174175 | 0.0916809 | intron-variant | STC1 | GRCh38.p7 | 8:23849288 | AGCTTCAATGGAGCA[A/G]AGCAAGCCCAGCATG | 6781 |
rs1347548 | snp | C/T | 0.461259 | 0.133677 | intron-variant | STC1 | GRCh38.p7 | 8:23849388 | TTGCATGGAAGATTC[C/T]GGTTTTCAAGGGCTG | 6781 |
rs1369836 | snp | A/G | 0.389152 | 0.207694 | upstream-variant-2KB | STC1 | GRCh38.p7 | 8:23856609 | GTCCTGAAGGTACTT[A/G]CAGGTGAGTTGGGAA | 6781 |
rs1438452 | snp | C/T | 0.204803 | 0.245881 | utr-variant-5-prime | STC1 | GRCh38.p7 | 8:23854745 | cagcagcagcggcgg[C/T]ggcagcagcagcagc | 6781 |
rs1438453 | snp | A/C | 0.201418 | 0.245234 | utr-variant-5-prime | STC1 | GRCh38.p7 | 8:23854661 | CAGCAACAACAACAA[A/C]AAAAAATCCTCATCA | 6781 |
rs1992053 | snp | C/T | 0.489153 | 0.0728422 | intron-variant | STC1 | GRCh38.p7 | 8:23845074 | TGCATATGGTGGTCA[C/T]CCAGTGAGAGCCCGG | 6781 |
rs3758088 | snp | A/G | 0.403684 | 0.197183 | upstream-variant-2KB | STC1 | GRCh38.p7 | 8:23856163 | AAAGCCACTGGCCCC[A/G]TTTCTCTGCAAGATT | 6781 |
rs3758089 | snp | C/T | 0.199873 | 0.244923 | upstream-variant-2KB | STC1 | GRCh38.p7 | 8:23855949 | AAATATAAGTTTCTA[C/T]ACCAGGCATGATTTG | 6781 |
rs3808532 | snp | C/T | | | utr-variant-3-prime | STC1 | GRCh38.p7 | 8:23844502 | CTTCCTCTGCCATGT[C/T]TTTCCCCTGCTCCCC | 6781 |
rs3824219 | snp | G/T | 0.00993419 | 0.0697739 | intron-variant | STC1 | GRCh38.p7 | 8:23845412 | CTCATCCACCTTAGT[G/T]TCTTCTCTACAAAAT | 6781 |
rs3824220 | snp | C/T | 0.273049 | 0.248935 | utr-variant-3-prime | STC1 | GRCh38.p7 | 8:23844117 | AAGCTAACATCTTTA[C/T]GTACTGTAACTGCTC | 6781 |
rs3834378 | in-del | -/A | 0.178465 | 0.239547 | upstream-variant-2KB | STC1 | GRCh38.p7 | 8:23855503 | TACAGATGGGAAAAC[-/A]GAGGTGGGGCAAGGT | 6781 |
rs3840699 | in-del | -/T | | | utr-variant-3-prime | STC1 | GRCh38.p7 | 8:23844498 | CTCTGCCATGTTTTT[-/T]CCCCTGCTCCCCTGA | 6781 |
rs3841664 | in-del | -/T | | | intron-variant | STC1 | GRCh38.p7 | 8:23851701 | AGATGGGGAGAGGGC[-/T]TTTTTTTTTTTCAAT | 6781 |
rs4872202 | snp | A/G | 0.5 | 0 | intron-variant | STC1 | GRCh38.p7 | 8:23848554 | AAAAAAAAAAAAAAA[A/G]AAGAAGAAGAAGATT | 6781 |
rs5890129 | in-del | -/T | | | utr-variant-5-prime | STC1 | GRCh38.p7 | 8:23854565 | GGGTTTTTTTTTTTT[-/T]CCTGCCCCCCTTTCC | 6781 |
rs5890130 | in-del | -/G | 0 | 0 | upstream-variant-2KB | STC1 | GRCh38.p7 | 8:23856316 | GGGGGGGGCGGCGGA[-/G]CGGTTCTGGGTGATG | 6781 |
rs7010237 | snp | A/G | 0.437824 | 0.164991 | intron-variant | STC1 | GRCh38.p7 | 8:23845172 | AATAGTTCATCAGCT[A/G]AAGGTGGCTTTTGCT | 6781 |
rs7828058 | snp | A/G | 0.294576 | 0.245994 | intron-variant | STC1 | GRCh38.p7 | 8:23845769 | CTAGGCAAGAAGTCT[A/G]TTTAAATGGAAATAT | 6781 |
rs7831701 | snp | G/T | 0.29432 | 0.24604 | intron-variant | STC1 | GRCh38.p7 | 8:23845766 | ATCCTAGGCAAGAAG[G/T]CTATTTAAATGGAAA | 6781 |
rs7841877 | snp | A/G | 0.0325976 | 0.123435 | intron-variant | STC1 | GRCh38.p7 | 8:23850522 | ACCTTTCCAGGCCAC[A/G]CACATGAACTGAGGA | 6781 |
rs9942746 | snp | A/G | 0.0162398 | 0.0886349 | utr-variant-3-prime | STC1 | GRCh38.p7 | 8:23843564 | GGCACCGATGAAAGG[A/G]GACGAGTAAAGAACT | 6781 |
rs9969426 | snp | A/G | 0.213937 | 0.247385 | intron-variant | STC1 | GRCh38.p7 | 8:23846203 | CAGCGAATTCTTTAA[A/G]TACCCCCAAGCAATG | 6781 |
rs10089975 | snp | A/G | 0.0444908 | 0.142359 | upstream-variant-2KB | STC1 | GRCh38.p7 | 8:23856058 | TTAGGGTAGGAAGGT[A/G]GTGAAGGTATTATAC | 6781 |
rs10638798 | in-del | -/AA | | | utr-variant-3-prime | STC1 | GRCh38.p7 | 8:23842485 | GAAGAGGTCACAGCC[-/AA]AAAAAAAAAAAAAAA | 6781 |
rs10643245 | in-del | -/TG | | | intron-variant | STC1 | GRCh38.p7 | 8:23845563 | CACAGGTGTGTGTGT[-/TG]GTGTGTGTGTATGCA | 6781 |
rs10679520 | in-del | -/GT | | | intron-variant | STC1 | GRCh38.p7 | 8:23845573 | TGTGTGTGTGTGTGT[-/GT]ATGCAGATCTGTGCA | 6781 |
rs11135775 | snp | C/T | 0.116814 | 0.211569 | intron-variant | STC1 | GRCh38.p7 | 8:23845090 | CCAGTGAGAGCCCGG[C/T]GAGACCCAGGCTTTC | 6781 |
rs11411346 | in-del | -/T | 0.294064 | 0.246086 | intron-variant | STC1 | GRCh38.p7 | 8:23848155 | GGGATTCAATACACA[-/T]TTTTTCTTCTCAATT | 6781 |
rs11464714 | in-del | -/A/G | 0.5 | 0 | intron-variant | STC1 | GRCh38.p7 | 8:23849978 | ACAGCCCACTTGAGA[-/A/G]AAATGGTTGGATTTT | 6781 |
rs11779426 | snp | A/G | 0.155656 | 0.231515 | intron-variant | STC1 | GRCh38.p7 | 8:23849280 | AGGTGAGCAGCTTCA[A/G]TGGAGCAAAGCAAGC | 6781 |
rs11985636 | snp | C/G | 0.0142736 | 0.0832652 | intron-variant | STC1 | GRCh38.p7 | 8:23848656 | CCAGCCCGAAAGGAC[C/G]TTTTTAATTATGTTT | 6781 |
rs12678447 | snp | A/G | 0.208779 | 0.246578 | intron-variant | STC1 | GRCh38.p7 | 8:23850978 | TCATGGTTTCAGCCA[A/G]ATCTGATGTCTTAAA | 6781 |
rs12679914 | snp | G/T | 0 | 0 | missense | STC1 | GRCh38.p7 | 8:23844970 | CAATTTTCTCCATCA[G/T]GCTGTCTCTGATTGT | 6781 |
rs12681669 | snp | A/G | 0.271972 | 0.249033 | intron-variant | STC1 | GRCh38.p7 | 8:23847755 | GTTGACTTAGCAATC[A/G]TCACCTATTTAGTGA | 6781 |
rs13251892 | snp | C/G | 0 | 0 | utr-variant-3-prime | STC1 | GRCh38.p7 | 8:23843050 | CCTAGTGAGAGTCAA[C/G]CACCAATAGTTTCTA | 6781 |
rs13252189 | snp | A/G | | | utr-variant-3-prime | STC1 | GRCh38.p7 | 8:23843146 | GACCTTTGGTGGGCA[A/G]TGACGCTCATAAGGG | 6781 |
rs13252190 | snp | C/G | | | utr-variant-3-prime | STC1 | GRCh38.p7 | 8:23843151 | TTGGTGGGCAGTGAC[C/G]CTCATAAGGGACTGT | 6781 |
rs13254161 | snp | C/G | | | utr-variant-3-prime | STC1 | GRCh38.p7 | 8:23843092 | TTGGAGTGGCCCCTG[C/G]AGTCCTACCCCTCCT | 6781 |
rs13254973 | snp | A/C | | | utr-variant-3-prime | STC1 | GRCh38.p7 | 8:23843052 | TAGTGAGAGTCAAGC[A/C]CCAATAGTTTCTACC | 6781 |
rs13262225 | snp | G/T | | | utr-variant-3-prime | STC1 | GRCh38.p7 | 8:23842942 | TTAAAGGCTTTATGG[G/T]AAAGTTGTATTGCTT | 6781 |
rs13262750 | snp | G/T | | | utr-variant-3-prime | STC1 | GRCh38.p7 | 8:23843083 | TAAGCGAGTTTGGAG[G/T]GGCCCCTGCAGTCCT | 6781 |
rs13262813 | snp | G/T | | | utr-variant-3-prime | STC1 | GRCh38.p7 | 8:23843140 | GACATTGACCTTTGG[G/T]GGGCAGTGACGCTCA | 6781 |
rs28480047 | snp | C/T | 0.0752113 | 0.178743 | utr-variant-3-prime | STC1 | GRCh38.p7 | 8:23843072 | TAGTTTCTACCTAAG[C/T]GAGTTTGGAGTGGCC | 6781 |
rs28569206 | snp | A/C | 0.0752113 | 0.178743 | intron-variant | STC1 | GRCh38.p7 | 8:23849091 | CCCCTTGTTCTGGCT[A/C]CTGGTCCAGTCACAG | 6781 |
rs34367952 | in-del | -/A | | | downstream-variant-500B | STC1 | GRCh38.p7 | 8:23841778 | AATGTTTTTTAAAAA[-/A]CTTAGGAAATGTTGA | 6781 |
rs34552249 | in-del | -/AGAA/AGAAAGAAAGAAAGAA | 0 | 0 | intron-variant | STC1 | GRCh38.p7 | 8:23853065 | GAAAGAAAGAAAGAA[-/AGAA/AGAAAGAAAGAAAGAA]GAAACACAGGTGTGG | 6781 |
rs34797510 | in-del | -/TG | 0.5 | 0 | intron-variant | STC1 | GRCh38.p7 | 8:23845574 | GTGTGTGGGCACAGG[-/TG]TGTGTGTGTGTGTGT | 6781 |
rs34804980 | in-del | -/T | | | upstream-variant-2KB | STC1 | GRCh38.p7 | 8:23856777 | GCTGTTGTTGCTTTT[-/T]AAGAATTTAGGAAAA | 6781 |
rs34914685 | in-del | -/G | | | intron-variant | STC1 | GRCh38.p7 | 8:23849980 | CAGCCCACTTGAGAA[-/G]AATGGTTGGATTTTT | 6781 |
rs56311630 | in-del | -/T | | | intron-variant | STC1 | GRCh38.p7 | 8:23850934 | TTTTTTTTTTTTTTT[-/T]AATCATGGCCAATTG | 6781 |
rs58218027 | snp | C/T | | | intron-variant | STC1 | GRCh38.p7 | 8:23850790 | TTTTACAAAGGAAAT[C/T]TGAGCCCCAGGGAAG | 6781 |
rs58582390 | snp | A/G | 0.0325976 | 0.123435 | utr-variant-3-prime | STC1 | GRCh38.p7 | 8:23843007 | ACCAGGATCCCTATC[A/G]CTCGATTTGGTCAAA | 6781 |
rs58602683 | in-del | -/C | 0.0322114 | 0.122752 | intron-variant | STC1 | GRCh38.p7 | 8:23846214 | TTAAATACCCCCAAG[-/C]AATGTAGCTAAGCTT | 6781 |
rs59012039 | in-del | -/A | | | intron-variant | STC1 | GRCh38.p7 | 8:23851690 | TTGAAAAAAAAAAAA[-/A]GCCCTCTCCCCATCT | 6781 |
rs59221433 | snp | A/G | 0.0275645 | 0.114116 | intron-variant | STC1 | GRCh38.p7 | 8:23850166 | CCTTTCCCTAAGGAG[A/G]AACTACTTTTTTGTT | 6781 |
rs59236165 | snp | A/G | 0.00636936 | 0.0560724 | intron-variant | STC1 | GRCh38.p7 | 8:23845670 | ATGCCCTTATCACAT[A/G]CTTGGACAGCCCTGA | 6781 |
rs59758009 | snp | C/T | 0.000798403 | 0.0199641 | missense | STC1 | GRCh38.p7 | 8:23854424 | AGTTTTGAGCCGCCA[C/T]TCGGGATTTCCTGGG | 6781 |
rs61681555 | snp | C/T | | | utr-variant-3-prime | STC1 | GRCh38.p7 | 8:23843312 | CTTTCTTTTTTTTTT[C/T]TTTTTTTCTATTTTT | 6781 |
rs62502211 | snp | A/G | | | utr-variant-3-prime | STC1 | GRCh38.p7 | 8:23842217 | TAATGGCACAAAAAT[A/G]TCTAAAGTGCAACCA | 6781 |
rs68107520 | snp | C/T | 0.293807 | 0.246132 | intron-variant | STC1 | GRCh38.p7 | 8:23848043 | ACCTTCAGCAGGTCA[C/T]TCCACTCTCTGAGCC | 6781 |
rs71515851 | snp | C/T | 0.5 | 0 | downstream-variant-500B | STC1 | GRCh38.p7 | 8:23841600 | AAGACCTGGAAGGGA[C/T]AGATCCCAATCATTC | 6781 |
rs71515852 | snp | C/T | 0.5 | 0 | intron-variant | STC1 | GRCh38.p7 | 8:23847030 | TGGTTTCTGATCTCC[C/T]ATCCCTCCAATAAGG | 6781 |
rs71549821 | in-del | -/AAAG/AAAGAAAG/AAAGAAAGAAAG/AAAGAAAGAAAGAAAG | 0.461703 | 0.132974 | intron-variant | STC1 | GRCh38.p7 | 8:23853035 | TAAAAGCCTTTTAAA[lengthTooLong]AAAGAAAGAAAGAAA | 6781 |
rs72577353 | in-del | -/G | 0.46014 | 0.13543 | intron-variant | STC1 | GRCh38.p7 | 8:23849979 | ACAGCCCACTTGAGA[-/G]AAATGGTTGGATTTT | 6781 |
rs73553066 | snp | A/G | 0.00358779 | 0.0422022 | utr-variant-3-prime | STC1 | GRCh38.p7 | 8:23844478 | GTTTTGTGTTTGGGG[A/G]TGGTCTCAGGGGAGC | 6781 |
rs73553077 | snp | A/G | 0.00478085 | 0.0486577 | intron-variant | STC1 | GRCh38.p7 | 8:23850387 | AATCATAGAAATTCA[A/G]GGCTGGGAGTCAAGT | 6781 |
rs73553080 | snp | G/T | 0.00318978 | 0.0398085 | intron-variant | STC1 | GRCh38.p7 | 8:23852865 | ATTTTAGTCTAAATG[G/T]CAGAGAAGACTGTGC | 6781 |
rs73553083 | snp | C/T | 0.00517822 | 0.0506191 | intron-variant | STC1 | GRCh38.p7 | 8:23853139 | CGCAAAAAACTTGCA[C/T]GAGGCTTTCTACATT | 6781 |
rs73671645 | snp | C/T | 0.00914312 | 0.0669923 | utr-variant-3-prime | STC1 | GRCh38.p7 | 8:23842439 | ATATATAGATATCAT[C/T]GTGGGGAGAAAAGGG | 6781 |
rs73671646 | snp | C/T | 0.0126979 | 0.078662 | intron-variant | STC1 | GRCh38.p7 | 8:23848785 | CCAAATACACACATA[C/T]TGCCTAGGAACGTTC | 6781 |
rs73671647 | snp | C/T | 0.0142736 | 0.0832652 | upstream-variant-2KB | STC1 | GRCh38.p7 | 8:23856627 | GGTGAGTTGGGAAGA[C/T]GACCAGCCACAGTCA | 6781 |
rs74334947 | snp | A/G | 0.00874735 | 0.0655527 | upstream-variant-2KB | STC1 | GRCh38.p7 | 8:23855394 | AGGGGGAATTTATGT[A/G]AGTGGAAAAGCCTTG | 6781 |
rs74663949 | snp | A/G | 0.0026137 | 0.0360558 | synonymous-codon | STC1 | GRCh38.p7 | 8:23852365 | CTGTAGAGCACTGTT[A/G]AGGCAACGAACCACT | 6781 |
rs75213784 | snp | C/T | 0.0383715 | 0.133092 | intron-variant | STC1 | GRCh38.p7 | 8:23853433 | TGTTTTAGGCAAGCT[C/T]GAATTGTGAATCACT | 6781 |
rs75374095 | snp | A/G | 0.0588605 | 0.161139 | intron-variant | STC1 | GRCh38.p7 | 8:23846654 | GTGGCACAGCAGAAG[A/G]AAGCTGGGGACTGAG | 6781 |
rs75680546 | in-del | -/GAA | | | intron-variant | STC1 | GRCh38.p7 | 8:23853037 | AAAGCCTTTTAAAAA[-/GAA]AGAAAGAAAGAAAGA | 6781 |
rs75787623 | snp | G/T | 0.0209421 | 0.100162 | intron-variant | STC1 | GRCh38.p7 | 8:23845379 | CACAGAGACCATTTG[G/T]TGACTAGTTCAACTC | 6781 |
rs76369571 | snp | C/G | 0.0158469 | 0.0875917 | intron-variant | STC1 | GRCh38.p7 | 8:23850040 | TGATAAAGTCACTTC[C/G]AAGGACTAGAGAAGT | 6781 |
rs77260821 | snp | A/G | 0.0154538 | 0.0865337 | intron-variant | STC1 | GRCh38.p7 | 8:23850656 | TTTGAATACTAAGAT[A/G]AGAATGGGATCTGGA | 6781 |
rs77654454 | snp | A/T | | | intron-variant | STC1 | GRCh38.p7 | 8:23853262 | GCCATAGGATTCTCC[A/T]CTGAGATCAAAAGCA | 6781 |
rs77724796 | snp | G/T | 0.0162398 | 0.0886349 | intron-variant | STC1 | GRCh38.p7 | 8:23852566 | AGACAGGCTCCTTTT[G/T]TTTATGATTGCTGGA | 6781 |