iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

SNP - dbSNP
dbSNP	Type	Alleles	Het	Se(het)	Fxn-class	Gene Name	Assembly	Chr-pos	Sequence	Entrez Gene
rs7171	snp	C/G	0.493969	0.05458	upstream-variant-2KB, utr-variant-3-prime	LTBP4, SHKBP1	GRCh38.p7	19:40591370	TGGAAGCCAAAGTCA[C/G]CCTCCCCAATAAAGT	92799
rs12704	snp	C/T	0	0	upstream-variant-2KB, utr-variant-3-prime	LTBP4, SHKBP1	GRCh38.p7	19:40591354	CACCTTCCCTCTTTT[C/T]TGGAAGCCAAAGTCA	92799
rs366973	snp	C/G	0.0718919	0.175435	intron-variant	SHKBP1	GRCh38.p7	19:40585175	gcagtggcatgatgt[C/G]agttctctgccacct	92799
rs372038	snp	C/T	0.0399052	0.1355	intron-variant	SHKBP1	GRCh38.p7	19:40582095	atctctactaaaaaa[C/T]ataaaaattagctga	92799
rs392726	snp	A/G	0.493293	0.0575177	intron-variant	SHKBP1	GRCh38.p7	19:40589912	CTCCTTTCATCCCCC[A/G]TGCAGTGGCCACGGC	92799
rs393569	snp	C/T	0.488057	0.0763479	intron-variant	SHKBP1	GRCh38.p7	19:40588932	AGGGCTGGGGGGTTG[C/T]GGCAGTCAGTGGAGC	92799
rs394115	snp	C/T	0.0475351	0.146656	intron-variant	SHKBP1	GRCh38.p7	19:40581851	GTTAGAATTCCAGAC[C/T]GTTTTAGAATCCCAT	92799
rs396118	snp	C/T	0.489863	0.0704664	synonymous-codon	SHKBP1	GRCh38.p7	19:40590283	CAGCACTGTGAAGGC[C/T]GTCGTGGGTGAGCCG	92799
rs398162	snp	C/T	0.0119091	0.0762411	intron-variant	SHKBP1	GRCh38.p7	19:40586655	tacggcgtgagccac[C/T]gtgcccggcctctcc	92799
rs400195	snp	C/G	0.0839998	0.186933	intron-variant	SHKBP1	GRCh38.p7	19:40587270	ttattgtctgccatc[C/G]ctgctagaatgtcag	92799
rs403842	snp	A/T	0.0119091	0.0762411	intron-variant	SHKBP1	GRCh38.p7	19:40585389	ggaaatacagacttg[A/T]gtcactgtgcttggc	92799
rs404584	snp	A/G	0.497668	0.0340657	intron-variant	SHKBP1	GRCh38.p7	19:40585239	aacctcctgaacagc[A/G]gaaccacaggcatgc	92799
rs406133	snp	C/G	0.497121	0.0378299	intron-variant	SHKBP1	GRCh38.p7	19:40585915	gtctcaaaaaacaaa[C/G]aaaaaTGACATAATA	92799
rs410101	snp	A/G	0.486464	0.0811471	intron-variant	SHKBP1	GRCh38.p7	19:40584284	GCCTTAATCACAAAG[A/G]TGGGAAAGAAACACA	92799
rs413901	snp	C/G	0.487177	0.0790385	intron-variant	SHKBP1	GRCh38.p7	19:40584354	TTTACAGCAGATGAA[C/G]CTGAGTTCTCTTACT	92799
rs415075	snp	C/G	0.492037	0.0625946	intron-variant	SHKBP1	GRCh38.p7	19:40586548	atttttgtattttta[C/G]tagagacagggtttc	92799
rs418007	snp	A/G	0.34101	0.232846	intron-variant	SHKBP1	GRCh38.p7	19:40581911	aGTGAAGATTCCAGC[A/G]GGAATTAGAGAAGAT	92799
rs420490	snp	C/G	0.499396	0.0173617	intron-variant	SHKBP1	GRCh38.p7	19:40583867	GGCAACAGAATGAGA[C/G]TCTGTCTCAGAAAAA	92799
rs420720	snp	C/G	0.488302	0.0755777	intron-variant	SHKBP1	GRCh38.p7	19:40589384	CAGGTGTTGGTGGGA[C/G]TGACCTGGCGCAGTG	92799
rs421739	snp	C/T	0.41408	0.188621	intron-variant	SHKBP1	GRCh38.p7	19:40581853	TAGAATTCCAGACCG[C/T]TTTAGAATCCCATAC	92799
rs450819	snp	A/G	0.304188	0.244057	intron-variant	SHKBP1	GRCh38.p7	19:40580108	AGCAGCACTAAACTC[A/G]GTCTTCCTCTGTGCT	92799
rs710160	snp	A/G	0.422473	0.180978	intron-variant	SHKBP1	GRCh38.p7	19:40581585	GTGCTGGAACTACAG[A/G]TGTGAGTTACTGTGC	92799
rs814518	snp	A/G	0.425894	0.177655	intron-variant	SHKBP1	GRCh38.p7	19:40578787	TGGGAGTTGTAGTCC[A/G]GGTTTGGTTTCTTTG	92799
rs814519	snp	G/T	0.426507	0.177046	intron-variant	SHKBP1	GRCh38.p7	19:40578957	TCTGATTGGTAGAAG[G/T]AACAGAGTAGGGAAA	92799
rs843778	snp	A/G	0.496681	0.0405994	intron-variant, upstream-variant-2KB	SPTBN4, SHKBP1	GRCh38.p7	19:40574908	tagtcccagacactc[A/G]ggagactgaggcaca	92799
rs890935	snp	C/G	0.0609498	0.163585	synonymous-codon, intron-variant	SHKBP1	GRCh38.p7	19:40583484	CTCCATTTACTACGT[C/G]GGTGAGCAGCAGCCT	92799
rs1046422	snp	A/C	0	0	upstream-variant-2KB, utr-variant-3-prime	LTBP4, SHKBP1	GRCh38.p7	19:40591340	TGTTACTAGGTCCCC[A/C]CCTTCCCTCTTTTCT	92799
rs1185182	snp	A/G	0	0	upstream-variant-2KB, intron-variant, downstream-variant-500B	LTBP4, SHKBP1	GRCh38.p7	19:40591817	ACATTCCTCCCCTGC[A/G]ACACCttttttgttt	92799
rs2042937	snp	A/C			intron-variant	SHKBP1	GRCh38.p7	19:40585552	ctgtctcaggaaaag[A/C]caaaaaaaaaaaaaa	92799
rs2290682	snp	C/T	0.404948	0.196192	intron-variant	SHKBP1	GRCh38.p7	19:40577538	TACCCCATCCATCCT[C/T]TGCCCCCCTTTCCCG	92799
rs3217684	in-del	-/G	0.405981	0.195372	intron-variant	SHKBP1	GRCh38.p7	19:40578565	TCCCAATGGAATGGA[-/G]GGGGCGCGGAGGTGG	92799
rs7251057	snp	C/T	0.413748	0.188909	intron-variant	SHKBP1	GRCh38.p7	19:40585550	CTTTTTTTTTTTTTT[C/T]GTCTTTTCCTGAGAC	92799
rs7253575	snp	C/T	0.0923359	0.194016	upstream-variant-2KB, intron-variant, downstream-variant-500B	LTBP4, SHKBP1	GRCh38.p7	19:40591869	aggcatggctggatc[C/T]ggggcttcaaacact	92799
rs7254675	snp	A/T			intron-variant	SHKBP1	GRCh38.p7	19:40579506	atctctactaaaaat[A/T]aaaaaaaattagcca	92799
rs7258549	snp	C/G			intron-variant	SHKBP1	GRCh38.p7	19:40579959	aatcacttgaaccca[C/G]gaggcagaggttgca	92799
rs7259267	snp	A/G			intron-variant	SHKBP1	GRCh38.p7	19:40588885	CCAGGAGCCTGCAAC[A/G]ATTGGGGTGTCCTGA	92799
rs7259585	snp	A/G	1.65485e-05	0.00287645	intron-variant	SHKBP1	GRCh38.p7	19:40580719	GGGCATGCGGTGAGG[A/G]TTGGTGATGTCCCCT	92799
rs8106578	snp	A/G	0.0894459	0.191631	intron-variant, upstream-variant-2KB	SHKBP1, LTBP4	GRCh38.p7	19:40590919	CATGGTGTTCCCGGG[A/G]ACAGAGTGGCCCAGC	92799
rs10402698	snp	G/T	0.396182	0.202807	intron-variant	SHKBP1	GRCh38.p7	19:40585951	cgcttcgtcacctag[G/T]ctggagtgcagtggc	92799
rs10408716	snp	C/T	0.00398564	0.0444627	intron-variant	SHKBP1	GRCh38.p7	19:40585262	aggcatgcatcacca[C/T]acctgtctaattttt	92799
rs11458145	in-del	-/A			intron-variant, upstream-variant-2KB	SPTBN4, SHKBP1	GRCh38.p7	19:40575015	CAAGACTCTGTCTCA[-/A]AAAAAAAAAAAAAAA	92799
rs11555184	snp	A/T			utr-variant-3-prime, upstream-variant-2KB	SPTBN4, SHKBP1	GRCh38.p7	19:40576149	GACGTTTTGCAAAAA[A/T]AAACTAAGTCAGGAA	92799
rs11555272	snp	C/G	0.0739657	0.177516	synonymous-codon, utr-variant-5-prime	SHKBP1	GRCh38.p7	19:40580403	AGCCCCTGTCCGACG[C/G]AGCAACACGATGCCC	92799
rs11672651	snp	C/T	0.164009	0.234746	intron-variant	SHKBP1	GRCh38.p7	19:40583368	GAATGGAAGGGCTCC[C/T]GGCTGCAGCCTGTCC	92799
rs11672711	snp	C/T	0	0	intron-variant	SHKBP1	GRCh38.p7	19:40583554	AGGGAGGGAGAGAGG[C/T]TGGGGCACTTGGAAC	92799
rs11878674	snp	C/T	0.00267156	0.0364505	synonymous-codon	SHKBP1	GRCh38.p7	19:40590262	GTGCTCCGTGCGCTC[C/T]GTGGACGGCTCACCC	92799
rs11879546	snp	A/G	0.0663309	0.169604	upstream-variant-2KB, intron-variant, downstream-variant-500B	LTBP4, SHKBP1	GRCh38.p7	19:40591711	gggaggatcgcttga[A/G]cctaggaggccaagg	92799
rs12610540	snp	G/T	0.00755907	0.0610114	intron-variant	SHKBP1	GRCh38.p7	19:40578699	TGCTTGGAAAGGAAG[G/T]TGGACACAGCATTTC	92799
rs12977500	snp	A/G	0.225597	0.248806	intron-variant	SHKBP1	GRCh38.p7	19:40588859	CTGATTCCCACTTGC[A/G]GCCACCTGACCCAGG	92799
rs16974364	in-del	-/C	0.274393	0.248807	downstream-variant-500B, upstream-variant-2KB	SPTBN4, SHKBP1	GRCh38.p7	19:40576637	GGGTCTAAACACACG[-/C]CCCTTGACGAGAACC	92799
rs16974365	snp	C/T	0.445327	0.156036	synonymous-codon, upstream-variant-2KB	SHKBP1	GRCh38.p7	19:40576962	TCCCGGGGAAGTCAT[C/T]CATCTGAATGTGGGA	92799
rs17855499	snp	A/T	0	0	missense	SHKBP1	GRCh38.p7	19:40589109	AGCGGGACGACCAGC[A/T]AGTGTTCATCCAGAA	92799
rs28488028	snp	A/T	0.0402882	0.136092	intron-variant	SHKBP1	GRCh38.p7	19:40587744	TGTTTCTACAAAAAA[A/T]TTTTAAAAAATTAGC	92799
rs28612694	snp	A/G	0.00400377	0.044563	intron-variant	SHKBP1	GRCh38.p7	19:40580513	CTCGTGGAAGGTTGG[A/G]GCAGCTGTGGGGTCC	92799
rs34175472	in-del	-/C			intron-variant	SHKBP1	GRCh38.p7	19:40590872	GCCACAACTCCACTG[-/C]CCCTTCTGTGCAATG	92799
rs34903711	in-del	-/T	0.5	0	intron-variant	SHKBP1	GRCh38.p7	19:40585535	TTTTTTCTTTCTTTC[-/T]TTTTTTTTTTTTTTT	92799
rs35620022	in-del	-/A			intron-variant	SHKBP1	GRCh38.p7	19:40580032	GCGAAACTCCAACTC[-/A]AAAAAAAAAAAAAAA	92799
rs35684786	in-del	-/C	0.488363	0.0753851	intron-variant, upstream-variant-2KB	SHKBP1	GRCh38.p7	19:40577088	TCAAGGGTTGCTCCG[-/C]CCCCCCCCCCTTTGG	92799
rs35788736	in-del	-/C			intron-variant	SHKBP1	GRCh38.p7	19:40580054	AAAAAAAAAAAAAAA[-/C]CGGAAAATTAGGTAA	92799
rs35971132	snp	A/C/G	0.0247097	0.108523	synonymous-codon, upstream-variant-2KB	SHKBP1, LTBP4	GRCh38.p7	19:40591123	AGACCTCCGACGGCC[A/C/G]CCCACACCAGCCCCG	92799
rs36076841	snp	C/T	0.00138299	0.0262599	synonymous-codon	SHKBP1	GRCh38.p7	19:40588694	GATTTCCACCCAGCC[C/T]GGCTCCACCCCACTC	92799
rs36087813	in-del	-/C	0.5	0	intron-variant	SHKBP1	GRCh38.p7	19:40581537	CAAAAAAAAAAAAAA[-/C]AACAAAAAAAGAAAT	92799
rs45616834	snp	A/G	0.0271762	0.113356	intron-variant	SHKBP1	GRCh38.p7	19:40588564	CCTGAGGCTCTGGAC[A/G]GGCAGGCAGCATTGA	92799
rs55658896	snp	C/G	0.147194	0.227884	intron-variant	SHKBP1	GRCh38.p7	19:40586981	CAGTGCTGGGAGAGA[C/G]AGCTCAGATGGGAGT	92799
rs55736297	snp	A/G	0.114036	0.209795	intron-variant	SHKBP1	GRCh38.p7	19:40588377	GTCCAGGCAGGTGAC[A/G]AAATGGACCAGGACC	92799
rs57291083	in-del	-/TTTA			intron-variant	SHKBP1	GRCh38.p7	19:40579123	TTATTTATTTATTTA[-/TTTA]ATTTTATGAGACAGG	92799
rs57544864	in-del	-/C	0.472803	0.113397	intron-variant	SHKBP1	GRCh38.p7	19:40581532	CATCTCAAAAAAAAA[-/C]AAAAAAACAAAAAAA	92799
rs58051153	in-del	-/TT			intron-variant	SHKBP1	GRCh38.p7	19:40581938	ACTTTTTTTTTTTTT[-/TT]GAAATGGAGTCATTC	92799
rs58418484	snp	C/T	0.0111196	0.0737302	intron-variant	SHKBP1	GRCh38.p7	19:40581021	CATAAAATCCTCAAA[C/T]CCATAAGAATTCTCT	92799
rs58633563	snp	A/G	0.277867	0.248442	intron-variant	SHKBP1	GRCh38.p7	19:40581373	CAAAAAAATTAGCTG[A/G]GTGTGGTGGCACGTG	92799
rs58880858	in-del	-/AC			intron-variant	SHKBP1	GRCh38.p7	19:40577992	CACACACACACACAC[-/AC]TCAACATTTCCTCCA	92799
rs60047582	in-del	-/C/CC	0	0	intron-variant, upstream-variant-2KB	SHKBP1	GRCh38.p7	19:40577098	TCCGCCCCCCCCCCC[-/C/CC]TTTGGAGGCGCGAGA	92799
rs60115762	snp	A/G	0.0383715	0.133092	intron-variant	SHKBP1	GRCh38.p7	19:40590005	GCTGGGACGGGCCTC[A/G]GGTCTTCCCTGCAGT	92799
rs61373446	in-del	-/ACAC			intron-variant	SHKBP1	GRCh38.p7	19:40577949	CTTCGATTTCTCCCT[-/ACAC]ACACACACACACACA	92799
rs61457016	snp	G/T	0.114036	0.209795	intron-variant	SHKBP1	GRCh38.p7	19:40579494	CAGCAAGACCTCATC[G/T]CTACTAAAAATAAAA	92799
rs62107872	snp	A/T	0.121563	0.214485	intron-variant, upstream-variant-2KB	SPTBN4, SHKBP1	GRCh38.p7	19:40575389	TCCAAATACGGCCTC[A/T]GTGCCCTGTTTCTTC	92799
rs62107874	snp	A/G	0.279195	0.248289	intron-variant	SHKBP1	GRCh38.p7	19:40583176	TTAAAACTTTAAAAA[A/G]TACAGAGTCCAGGAG	92799
rs62107875	snp	C/T	0.00517822	0.0506191	intron-variant	SHKBP1	GRCh38.p7	19:40583289	GGGGCTGGGGAGCAG[C/T]GGGTGGGTTCTGGAG	92799
rs62107905	snp	C/T	0.5	0	intron-variant	SHKBP1	GRCh38.p7	19:40585554	TTTTTTTTTTTTGTC[C/T]TTTCCTGAGACAGAG	92799
rs62107906	snp	C/T	0.5	0	intron-variant	SHKBP1	GRCh38.p7	19:40588854	CTCCGCTGATTCCCA[C/T]TTGCGGCCACCTGAC	92799
rs67613859	in-del	-/AC	0.499987	0.00259581	intron-variant	SHKBP1	GRCh38.p7	19:40577949	CACACACACACACAC[-/AC]TCAACATTTCCTCCA	92799
rs71173658	in-del	-/A	0	0	intron-variant	SHKBP1	GRCh38.p7	19:40580054	AAAAAAAAAAAAAAA[-/A]CGGAAAATTAGGTAA	92799
rs71173659	in-del	-/T			intron-variant	SHKBP1	GRCh38.p7	19:40585536	TTTTTCTTTCTTTCT[-/T]TTTTTTTTTTTTTTG	92799
rs71334920	in-del	-/G	0.5	0	intron-variant	SHKBP1	GRCh38.p7	19:40582775	CAAGAACTGGCTTGG[-/G]CTCGGTGGCTCACAC	92799
rs71358921	snp	G/T	0.5	0	intron-variant	SHKBP1	GRCh38.p7	19:40583100	GATGGCTTGAGCCCA[G/T]GAGTTTGACGCCAGC	92799
rs73051877	snp	A/C	0.0405006	0.136419	intron-variant	SHKBP1	GRCh38.p7	19:40582495	CCAGCCTGGCTGCCC[A/C]CTTCCCAGTTTTCCA	92799
rs73051879	snp	A/T			intron-variant	SHKBP1	GRCh38.p7	19:40583154	TCTCTACAAAAAATT[A/T]AAAAAATTAAAACTT	92799
rs73051885	snp	A/T	0.106633	0.204807	intron-variant	SHKBP1	GRCh38.p7	19:40585114	GGATTATTCTTTTTT[A/T]AAAAAAAATAGAGAC	92799
rs74396912	snp	C/T	0.0240643	0.107019	intron-variant	SHKBP1	GRCh38.p7	19:40584605	TCACTTCTGATACCC[C/T]CTAGAAATCACTAAT	92799
rs74480722	snp	C/T	0.00557542	0.0525036	intron-variant	SHKBP1	GRCh38.p7	19:40581909	TTATCTTCTCTAATT[C/T]CTGCTGGAATCTTCA	92799
rs74787883	snp	A/C	0.000798403	0.0199641	intron-variant	SHKBP1	GRCh38.p7	19:40581533	CATCTCAAAAAAAAA[A/C]AAAAAACAAAAAAAG	92799
rs74817505	snp	A/G	0.0130921	0.0798413	intron-variant	SHKBP1	GRCh38.p7	19:40579294	GCTAATTAAAAAAAT[A/G]ATAATCATTTTAAAT	92799
rs75551227	snp	C/T	0.00953873	0.0683987	upstream-variant-2KB, utr-variant-3-prime	LTBP4, SHKBP1	GRCh38.p7	19:40591318	CCTCCTTGGAATAAA[C/T]GGTTATTGTTACTAG	92799
rs75847377	snp	C/T	0.0111196	0.0737302	utr-variant-3-prime, upstream-variant-2KB	SPTBN4, SHKBP1	GRCh38.p7	19:40575792	TCCCACTCACCACCC[C/T]CACCCCAGGTGCTGG	92799
rs76000727	snp	A/G	0.0592355	0.161582	intron-variant	SHKBP1	GRCh38.p7	19:40589394	TGGGACTGACCTGGC[A/G]CAGTGCCAGCCCAGT	92799
rs76171390	snp	A/G			intron-variant	SHKBP1	GRCh38.p7	19:40584653	TTGAGACAAGGTCTC[A/G]CTCTGCTGCCCAGGC	92799
rs76197975	snp	A/C			intron-variant	SHKBP1	GRCh38.p7	19:40581026	AATCCTCAAACCCAT[A/C]AGAATTCTCTGCTCT	92799
rs76731142	snp	G/T	0.5	0	intron-variant	SHKBP1	GRCh38.p7	19:40586385	TCTTTTTTTTTTTTT[G/T]AGACAGAGTCACATT	92799
rs76923492	snp	C/T	0.0501905	0.150254	intron-variant	SHKBP1	GRCh38.p7	19:40586700	TGTCTCTGTTCTGTG[C/T]CTGTTTCTTTCTCCC	92799
rs77082984	snp	C/G	0.00229091	0.0337669	synonymous-codon	SHKBP1	GRCh38.p7	19:40580418	GAGCAACACGATGCC[C/G]CCCAACCTTGGCAAT	92799

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