SNP - dbSNP |
dbSNP | Type | Alleles | Het | Se(het) | Fxn-class | Gene Name | Assembly | Chr-pos | Sequence | Entrez Gene |
rs3181 | snp | A/G | 0.455502 | 0.142369 | intron-variant | SIK3 | GRCh38.p7 | 11:117036327 | GCTGAGGCAGCTAAT[A/G]GGCTCATACAAAGGT | 23387 |
rs472111 | snp | C/G | 0.600937 | 0.143067 | intron-variant, downstream-variant-500B | SIK3, APOA1-AS | GRCh38.p7 | 11:116846153 | CTTATTCCCATAACC[C/G]AACCAAGAGACTGTG | 23387 |
rs473172 | snp | C/T | 0.41141 | 0.19091 | intron-variant | SIK3 | GRCh38.p7 | 11:116937254 | ATCTAAATAAATATA[C/T]GCATATACATACACA | 23387 |
rs473188 | snp | C/G | 0.40595 | 0.195396 | intron-variant | SIK3 | GRCh38.p7 | 11:116941313 | GCCTGGCCGAAAATA[C/G]CTTTTTTAATAATCA | 23387 |
rs474223 | snp | A/C | 0 | 0 | intron-variant | SIK3 | GRCh38.p7 | 11:116941456 | CATAGTAGTGTTCAA[A/C]CAAATGTGTTGTATT | 23387 |
rs475205 | snp | A/T | 0 | 0 | intron-variant | SIK3 | GRCh38.p7 | 11:116941555 | AATGGTTATGCAAGT[A/T]AGTCTTTCTGATCCT | 23387 |
rs476399 | snp | A/G | 0.424968 | 0.178567 | intron-variant | SIK3 | GRCh38.p7 | 11:116863012 | atctcagctcactgc[A/G]tcgtccgcctcctgg | 23387 |
rs482371 | snp | C/T | 0.416871 | 0.186156 | intron-variant | SIK3 | GRCh38.p7 | 11:116881447 | GCATTTGGATGACTT[C/T]GTGGGGAGAGAGCTG | 23387 |
rs484646 | snp | A/G | 0.422158 | 0.181278 | intron-variant, downstream-variant-500B | SIK3 | GRCh38.p7 | 11:116862140 | TCCTCCAAAATGCAC[A/G]GGCAAATCAGCCTGA | 23387 |
rs493101 | snp | A/G | 0.131038 | 0.219882 | intron-variant | SIK3 | GRCh38.p7 | 11:116962953 | CTCTTTCTCTTGGAC[A/G]GCACTGATCCACATA | 23387 |
rs493134 | snp | C/T | 0.383246 | 0.211531 | intron-variant | SIK3 | GRCh38.p7 | 11:116962963 | TGGACGGCACTGATC[C/T]ACATAATGCCAACAG | 23387 |
rs493197 | snp | C/T | | | intron-variant | SIK3 | GRCh38.p7 | 11:117058517 | agagcgagactccat[C/T]tcaaaaaaaaaaaaa | 23387 |
rs494606 | snp | A/C | 0.34659 | 0.230587 | utr-variant-3-prime, intron-variant, downstream-variant-500B | SIK3, APOA1-AS | GRCh38.p7 | 11:116843402 | AGACTCAAGTTGCTA[A/C]GACCTTTTGTCCTGC | 23387 |
rs497653 | snp | C/T | 0.0944967 | 0.195752 | intron-variant, upstream-variant-2KB | SIK3 | GRCh38.p7 | 11:116957768 | CCCAAGATTAAGTAA[C/T]TTACACCTAGTATGT | 23387 |
rs499910 | snp | C/T | 0.491316 | 0.0653198 | intron-variant | SIK3 | GRCh38.p7 | 11:116892318 | tcattgcttctgaga[C/T]gccatattctccagt | 23387 |
rs506014 | snp | G/T | 0 | 0 | intron-variant | SIK3 | GRCh38.p7 | 11:117087094 | TCCAGTTTGGGTTTT[G/T]GTCCCTTTATCAAAG | 23387 |
rs506205 | snp | G/T | | | intron-variant | SIK3 | GRCh38.p7 | 11:117087157 | GTAAAAGGTGAGACT[G/T]ggccgggtgcggtgg | 23387 |
rs506861 | snp | G/T | | | intron-variant | SIK3 | GRCh38.p7 | 11:117087170 | CTTggccgggtgcgg[G/T]ggctcatgcctgtaa | 23387 |
rs509171 | snp | C/T | 0.487809 | 0.0771174 | intron-variant | SIK3 | GRCh38.p7 | 11:116978141 | GAGAATTGCTTGAAC[C/T]GGGGAGGCGGAGGTT | 23387 |
rs509712 | snp | A/G | 0.287085 | 0.247234 | intron-variant | SIK3 | GRCh38.p7 | 11:116857313 | CATCTCCACAGATAC[A/G]CCGTAAGATACTCCA | 23387 |
rs510988 | snp | C/T | 0.373196 | 0.217538 | intron-variant | SIK3 | GRCh38.p7 | 11:116943088 | TATCTGTGGGCACCA[C/T]ATTCATGGATTCAAT | 23387 |
rs511676 | snp | G/T | 0.372189 | 0.218105 | intron-variant, upstream-variant-2KB | SIK3 | GRCh38.p7 | 11:116954168 | GCTGATACAGGAAGA[G/T]AAACTAATGACTCCT | 23387 |
rs512511 | snp | A/G | 0 | 0 | intron-variant, upstream-variant-2KB | SIK3 | GRCh38.p7 | 11:116954247 | AAAACATTTTTGGGG[A/G]AACAAATATAAATGT | 23387 |
rs513560 | snp | A/C | 0 | 0 | intron-variant, upstream-variant-2KB | SIK3 | GRCh38.p7 | 11:116954398 | ATAAAACTGAGAGGC[A/C]AAGAAGTTGTCAAGA | 23387 |
rs514316 | snp | A/C | 0 | 0 | intron-variant, upstream-variant-2KB | SIK3 | GRCh38.p7 | 11:116954443 | TTCAGATTCAACATC[A/C]ATCATCTGAAGCACA | 23387 |
rs514373 | snp | A/C | 0 | 0 | intron-variant, upstream-variant-2KB | SIK3 | GRCh38.p7 | 11:116954458 | AATCATCTGAAGCAC[A/C]AAAATGCCCTATCAA | 23387 |
rs518181 | snp | G/T | 0.414905 | 0.187899 | intron-variant | SIK3 | GRCh38.p7 | 11:116902071 | TTCTCCTCTGCACTG[G/T]AGAGAAGAGGAAGGC | 23387 |
rs518547 | snp | A/G | 0.14665 | 0.227637 | intron-variant, utr-variant-3-prime | SIK3 | GRCh38.p7 | 11:116867330 | GCTTACTTGGAGTCA[A/G]TGAAGTTTTCTTGGT | 23387 |
rs519794 | snp | C/T | 0.403158 | 0.197592 | intron-variant | SIK3 | GRCh38.p7 | 11:116988737 | gggttgagccttcag[C/T]gagccatgatcatgc | 23387 |
rs522817 | snp | A/G | | | intron-variant | SIK3 | GRCh38.p7 | 11:117076033 | TTTGCATATTTAGTA[A/G]AGACGGGGTTTCACC | 23387 |
rs522848 | snp | C/T | 0.139564 | 0.224285 | intron-variant | SIK3 | GRCh38.p7 | 11:116921729 | CTAATGACAGAAACA[C/T]CTCTTTAAAAATTCT | 23387 |
rs525302 | snp | C/G | 0.309648 | 0.24278 | intron-variant | SIK3 | GRCh38.p7 | 11:116891867 | atggtcttagaagtg[C/G]ctacatgaatggagg | 23387 |
rs532815 | snp | A/G | 0.417683 | 0.185425 | intron-variant | SIK3, APOA1-AS | GRCh38.p7 | 11:116848142 | ACACGGTGAAACCCC[A/G]TCTCTACTAAAAATA | 23387 |
rs533556 | snp | A/C | 0.422315 | 0.181128 | intron-variant, upstream-variant-2KB | SIK3 | GRCh38.p7 | 11:116870856 | AGGAGCTGGTCAGGC[A/C]AAGAGGGACAGGAGT | 23387 |
rs537431 | snp | C/T | 0.133435 | 0.221162 | intron-variant | SIK3 | GRCh38.p7 | 11:116985463 | AGTTAATCTTACTAG[C/T]TGAGTTTGCGCTTGT | 23387 |
rs539858 | snp | C/T | 0.357238 | 0.225832 | synonymous-codon | SIK3 | GRCh38.p7 | 11:116858297 | TTGCTGTTGCTGCTG[C/T]TGCTGCTGCTGCTGC | 23387 |
rs541496 | snp | C/T | 0.127254 | 0.217792 | intron-variant | SIK3 | GRCh38.p7 | 11:116964646 | AGCACTTTGGGAGGC[C/T]GAGGTAGGCAGATCA | 23387 |
rs541586 | snp | C/T | 0.125403 | 0.216739 | synonymous-codon | SIK3 | GRCh38.p7 | 11:116858480 | CAGCAGGGCCTGCTG[C/T]AGTGCCGACGTGGTA | 23387 |
rs541987 | snp | G/T | | | intron-variant | SIK3 | GRCh38.p7 | 11:116979399 | tggctaACAAACCTT[G/T]GTTAGTACATTTCCC | 23387 |
rs542042 | snp | G/T | | | intron-variant | SIK3 | GRCh38.p7 | 11:116979419 | GTACATTTCCCAAGT[G/T]GTGGCTCACCTTCTC | 23387 |
rs543819 | snp | C/T | 0.159292 | 0.232964 | intron-variant | SIK3 | GRCh38.p7 | 11:116879357 | AAGTTAAGGTTGTTG[C/T]GAAGGTTAAATGTAA | 23387 |
rs545274 | snp | C/T | 0.144632 | 0.226711 | intron-variant | SIK3 | GRCh38.p7 | 11:116860117 | gggtgtggtggcggg[C/T]gcctgtaatcccagc | 23387 |
rs547919 | snp | A/T | 0.139564 | 0.224285 | intron-variant | SIK3 | GRCh38.p7 | 11:116929438 | TGTGAAATTAATCAT[A/T]CTGCAGCATTTAAGA | 23387 |
rs548638 | snp | A/C | 0.14665 | 0.227637 | intron-variant, downstream-variant-500B | SIK3 | GRCh38.p7 | 11:116866377 | TTCCTGTGATTTCTC[A/C]TAACTTCAAGCTCTA | 23387 |
rs557331 | snp | A/G | 0.13446 | 0.221699 | intron-variant | SIK3 | GRCh38.p7 | 11:116863972 | TTCCAGACATCAGTC[A/G]TTTCCCTAGCCTGCT | 23387 |
rs560897 | snp | A/G | 0.132751 | 0.2208 | intron-variant | SIK3 | GRCh38.p7 | 11:116991371 | caaccttcgcctccc[A/G]ggttcaagtgattct | 23387 |
rs562179 | snp | A/G | 0.384401 | 0.210799 | intron-variant | SIK3 | GRCh38.p7 | 11:116934488 | AGAAGAAAATTTAGT[A/G]TACTTTTTGCTTGTA | 23387 |
rs567312 | snp | A/G | 0.416545 | 0.186448 | intron-variant | SIK3 | GRCh38.p7 | 11:116860022 | gaggccgaggtgggc[A/G]gatcatgaggtcagg | 23387 |
rs569568 | snp | C/T | 0.132751 | 0.2208 | intron-variant | SIK3 | GRCh38.p7 | 11:116986684 | GTAAGTGTTAGTCAC[C/T]AGCTATTGTCATCAT | 23387 |
rs569810 | snp | G/T | | | intron-variant | SIK3 | GRCh38.p7 | 11:116944959 | cactagctacatttc[G/T]tttttcttttttttt | 23387 |
rs573549 | snp | A/G | 0.428333 | 0.175206 | intron-variant | SIK3 | GRCh38.p7 | 11:116865963 | ATTTTCTTCCAATTC[A/G]AATAGGCTTGGCCAC | 23387 |
rs576262 | snp | C/G | 0.235854 | 0.249599 | intron-variant | SIK3 | GRCh38.p7 | 11:116893720 | GAGAGGgagggaggg[C/G]aagggtgaagtgtta | 23387 |
rs576475 | snp | A/G | 0.0410537 | 0.137264 | intron-variant | SIK3 | GRCh38.p7 | 11:116928629 | TTTCTTGCCACAAGC[A/G]CTCAGTCTTGGCAGT | 23387 |
rs577975 | snp | C/T | 0.348354 | 0.22984 | intron-variant | SIK3, APOA1-AS | GRCh38.p7 | 11:116852194 | TTTTGGTTTGTTTGC[C/T]GTGTCTTTTAAGGCT | 23387 |
rs579163 | snp | C/G | 0.414245 | 0.188477 | intron-variant, downstream-variant-500B | SIK3, APOA1-AS | GRCh38.p7 | 11:116842914 | GTGAGCCATGCCAGG[C/G]CCCTCCCTTTCTTTC | 23387 |
rs579890 | snp | C/T | 0.3752 | 0.216391 | intron-variant | SIK3 | GRCh38.p7 | 11:116928247 | CAAAGATATGTATGT[C/T]GTTGGTTTGGTATAA | 23387 |
rs581122 | snp | C/T | 0.127944 | 0.218179 | intron-variant | SIK3 | GRCh38.p7 | 11:116967899 | GGTGCACACTACCAG[C/T]GCTGACAGATAATGC | 23387 |
rs581828 | snp | A/G | 0.0448719 | 0.142907 | intron-variant | SIK3 | GRCh38.p7 | 11:116859956 | CATCTGGTTAAAAAT[A/G]CAGACTCTAggccgg | 23387 |
rs583219 | snp | A/G | 0.357664 | 0.225629 | intron-variant | SIK3, APOA1-AS | GRCh38.p7 | 11:116852455 | CTTCCTGACCCCAGA[A/G]CTTGTGCTCATGACC | 23387 |
rs585750 | snp | A/G | 0.126909 | 0.217598 | intron-variant, utr-variant-5-prime, upstream-variant-2KB | SIK3 | GRCh38.p7 | 11:116951003 | gctcctcacacCTTG[A/G]CGGCAGAAGTTGATC | 23387 |
rs587703 | snp | A/G | 0.127944 | 0.218179 | intron-variant | SIK3 | GRCh38.p7 | 11:116956849 | ACATAGAAACAAAAA[A/G]AGTCACAGATGTTCA | 23387 |
rs588918 | snp | C/T | 0.381113 | 0.21286 | intron-variant | SIK3 | GRCh38.p7 | 11:116985926 | TCAGATGCGGGCTAT[C/T]GGAAGAAAATCAATT | 23387 |
rs595137 | snp | C/T | 0.137527 | 0.223271 | intron-variant | SIK3 | GRCh38.p7 | 11:116900640 | TTTACATGCCTTCCA[C/T]ATGCTATTTCCTCTC | 23387 |
rs598503 | snp | C/T | 0.158962 | 0.232835 | intron-variant | SIK3, APOA1-AS | GRCh38.p7 | 11:116853488 | GGAAAAGTGCACAAA[C/T]GGACACAATGCACGC | 23387 |
rs599320 | snp | C/G | 0.2776 | 0.248472 | intron-variant | SIK3 | GRCh38.p7 | 11:116869943 | AGAGGTCCATGGCCA[C/G]ACTAGCTAGGATCAC | 23387 |
rs606343 | snp | G/T | 0.496483 | 0.0417852 | intron-variant | SIK3 | GRCh38.p7 | 11:116992326 | GAGGTGTTTTTTTTT[G/T]GGGGGGGGGGTCTTG | 23387 |
rs607273 | snp | A/T | 0.29278 | 0.246313 | intron-variant | SIK3 | GRCh38.p7 | 11:116992102 | TCCTGACCTCAAGTG[A/T]TCTGCCCGCTTTGGC | 23387 |
rs607756 | snp | A/G | 0.132751 | 0.2208 | intron-variant | SIK3 | GRCh38.p7 | 11:116992002 | AATACGTAGAAAGAC[A/G]AGATTTACCCCCTTT | 23387 |
rs609177 | snp | A/G | 0.419776 | 0.18351 | intron-variant | SIK3 | GRCh38.p7 | 11:116899801 | GGCTAGAAATCCCTC[A/G]TGCCCCAGGGACACC | 23387 |
rs614418 | snp | A/G | | | intron-variant | SIK3 | GRCh38.p7 | 11:117090365 | CCTAATTAAACACAA[A/G]AAGGAATTCTTCTTA | 23387 |
rs614944 | snp | C/T | 0.289424 | 0.246872 | intron-variant | SIK3, APOA1-AS | GRCh38.p7 | 11:116846947 | CACTGTGCTAAGCAC[C/T]TGATACTCACTAAGC | 23387 |
rs622302 | snp | A/G | 0.127254 | 0.217792 | intron-variant | SIK3 | GRCh38.p7 | 11:116960355 | acaaagtgagacctc[A/G]tctctacaaaaaata | 23387 |
rs623423 | snp | C/G | 0.132751 | 0.2208 | intron-variant | SIK3 | GRCh38.p7 | 11:116990803 | ATTGGTTTGTCCAAA[C/G]AGTGCTTTTAGGTGA | 23387 |
rs623638 | snp | G/T | | | intron-variant | SIK3 | GRCh38.p7 | 11:117076128 | tgctgggattacagg[G/T]gtgagccactgcacc | 23387 |
rs625145 | snp | A/T | 0.447938 | 0.152711 | intron-variant | SIK3 | GRCh38.p7 | 11:116857220 | TATGCACTGAACTCA[A/T]ACATTTCAGATGATC | 23387 |
rs628418 | snp | C/G | 0.0697316 | 0.173215 | intron-variant | SIK3, APOA1-AS | GRCh38.p7 | 11:116847650 | TAAGCACACAAGACA[C/G]CACTCTCAGGCAACC | 23387 |
rs634044 | snp | A/G | 0.145978 | 0.227331 | intron-variant | SIK3 | GRCh38.p7 | 11:116881842 | gaagtagatgcttaa[A/G]ttaacttaaagggtt | 23387 |
rs638392 | snp | A/T | 0.133093 | 0.220981 | intron-variant | SIK3 | GRCh38.p7 | 11:116989740 | TATTTTTAATTTGGA[A/T]GTCCACAGTAGTGGG | 23387 |
rs640411 | snp | C/G | 0.133777 | 0.221342 | intron-variant | SIK3, APOA1-AS | GRCh38.p7 | 11:116854587 | ACAGCACCTACAGTA[C/G]AGTCTTGTGCAACAC | 23387 |
rs640621 | snp | C/G | 0.425123 | 0.178415 | intron-variant, downstream-variant-500B | SIK3, APOA1-AS | GRCh38.p7 | 11:116856053 | cccgccaccacgccc[C/G]gctaattttttgtat | 23387 |
rs645258 | snp | G/T | 0.293551 | 0.246177 | intron-variant | SIK3 | GRCh38.p7 | 11:116930485 | TTAAGTCCAGGCTGG[G/T]CTACAGCTCTGGATT | 23387 |
rs649084 | snp | C/T | 0.126909 | 0.217598 | intron-variant | SIK3 | GRCh38.p7 | 11:116945053 | AGAATGTTGTGAACC[C/T]GGGAGGCGGAGCTTG | 23387 |
rs650150 | snp | A/G | 0.0402882 | 0.136092 | intron-variant | SIK3 | GRCh38.p7 | 11:116953769 | GACCCTAAGTCCCAC[A/G]TTCAGAAAGGATGCT | 23387 |
rs650590 | snp | A/C | 0 | 0 | intron-variant | SIK3 | GRCh38.p7 | 11:116989306 | GCCCACATTGTTTCC[A/C]AAGTTGACTTTGCAT | 23387 |
rs651130 | snp | G/T | | | intron-variant | SIK3 | GRCh38.p7 | 11:116943861 | ataaatggcacacat[G/T]gtattttatttgata | 23387 |
rs656041 | snp | G/T | | | intron-variant | SIK3 | GRCh38.p7 | 11:116965371 | ttaaaaaaaaaaaat[G/T]GTTGAATACATTTAA | 23387 |
rs656392 | snp | G/T | | | intron-variant | SIK3 | GRCh38.p7 | 11:116965331 | CTGTAGGACAAGAGT[G/T]GATTTAACTATAAAA | 23387 |
rs656434 | snp | G/T | | | intron-variant | SIK3 | GRCh38.p7 | 11:116965301 | ACATTGTTGGCACTT[G/T]GCAACAATAACAATC | 23387 |
rs656507 | snp | G/T | 0 | 0 | intron-variant | SIK3 | GRCh38.p7 | 11:116965251 | AGTTGCTCATAATAT[G/T]GGAGACACTCGTAGG | 23387 |
rs660083 | snp | C/G | 0.419456 | 0.183806 | intron-variant | SIK3, APOA1-AS | GRCh38.p7 | 11:116850113 | GTGCTGAATCTAACT[C/G]TGCAATGctggtcac | 23387 |
rs660443 | snp | C/T | 0.417521 | 0.185571 | intron-variant | SIK3 | GRCh38.p7 | 11:116889977 | ATATTACTACTGATA[C/T]TATGATTTGGATAAG | 23387 |
rs665895 | snp | A/C | 0 | 0 | intron-variant | SIK3 | GRCh38.p7 | 11:117078663 | ccgccttggcctccc[A/C]aagtgctgggattat | 23387 |
rs667119 | snp | A/T | 0.126909 | 0.217598 | intron-variant | SIK3 | GRCh38.p7 | 11:116965167 | GAAATCATTTTCTTT[A/T]TGTCTTTAAAAATTT | 23387 |
rs672058 | snp | C/T | 0.463989 | 0.129263 | intron-variant | SIK3 | GRCh38.p7 | 11:116893305 | agcaggggagggagg[C/T]aggacagcacagagg | 23387 |
rs674893 | snp | A/T | 0 | 0 | intron-variant | SIK3 | GRCh38.p7 | 11:116900869 | ATATATTAtttattt[A/T]ttttttttttttgaa | 23387 |
rs675834 | snp | A/T | 0.285257 | 0.247501 | intron-variant, utr-variant-3-prime | SIK3 | GRCh38.p7 | 11:116867020 | CCTCAGTAAAAAAAA[A/T]GTGTCAAGCTTGCCA | 23387 |
rs676234 | snp | A/G | 0.29046 | 0.246704 | intron-variant | SIK3, APOA1-AS | GRCh38.p7 | 11:116851455 | TTTCAATGGTTTTCT[A/G]TAATGATTAAGGTTA | 23387 |
rs681524 | snp | C/T | 0.0352966 | 0.128072 | intron-variant | SIK3 | GRCh38.p7 | 11:116877598 | TAGCCTTATTTATCA[C/T]TTTCTTCTCAATGTT | 23387 |
rs682048 | snp | A/C | 0.490231 | 0.0692021 | intron-variant, upstream-variant-2KB | SIK3 | GRCh38.p7 | 11:116957604 | TTTCGTATATGGTAG[A/C]TGCTGCTACTGCTGC | 23387 |
rs682149 | snp | G/T | 0 | 0 | intron-variant | SIK3 | GRCh38.p7 | 11:116941504 | AGTGTTTCACATAGG[G/T]TATTTTATCTTGTGA | 23387 |