iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

SNP - dbSNP
dbSNP	Type	Alleles	Het	Se(het)	Fxn-class	Gene Name	Assembly	Chr-pos	Sequence	Entrez Gene
rs4693	snp	A/G	0.494866	0.0504026	utr-variant-3-prime, synonymous-codon, nc-transcript-variant	NXF1	GRCh38.p7	11:62796537	CGACTCTGGAGACCG[A/G]CAAGGGCTCCTGGAT	10482
rs10484	snp	G/T	0.02016	0.0983543	upstream-variant-2KB, utr-variant-3-prime	NXF1, STX5	GRCh38.p7	11:62807115	TTGGCAGCAAAGGGA[G/T]ATGATGCCCTTACCC	10482
rs17644	snp	C/T	0	0	upstream-variant-2KB, utr-variant-3-prime	NXF1, STX5	GRCh38.p7	11:62807133	CCTTTGCTGCCAACG[C/T]TTCCTTTGGGAGAGG	10482
rs489275	snp	C/T	0.0441095	0.141807	utr-variant-3-prime, intron-variant, nc-transcript-variant	NXF1	GRCh38.p7	11:62799911	AAGGGTCCCTCTTGG[C/T]GCAAGGGCAAGAGGG	10482
rs490791	snp	A/C	0	0	intron-variant	NXF1	GRCh38.p7	11:62803673	TAAGACTGTTTAATC[A/C]CTAAGCTAGTCCTGG	10482
rs529220	snp	C/T	0.148326	0.228391	upstream-variant-2KB	NXF1	GRCh38.p7	11:62806009	TTTATTTCACAAATA[C/T]ATGTTGAGTTTTTAC	10482
rs539465	snp	C/T	0.0161686	0.088447	intron-variant	NXF1	GRCh38.p7	11:62795881	GAATCTTTAGAGTCC[C/T]GAGTTTGTAGCGTGG	10482
rs561520	snp	A/G	0.0441095	0.141807	intron-variant	NXF1	GRCh38.p7	11:62803148	atacagtgaaacccc[A/G]tctctactaaaaata	10482
rs595108	snp	C/G	0.0482946	0.147699	intron-variant	NXF1	GRCh38.p7	11:62795763	GGTAGGCCAAGCCAA[C/G]ACGGCTTGGGGGCAG	10482
rs631310	snp	C/T	0.314787	0.241459	utr-variant-3-prime, intron-variant, nc-transcript-variant	NXF1	GRCh38.p7	11:62800164	CACAGACCCAGCAAA[C/T]AGATAGTCAAGTCAG	10482
rs1815870	snp	C/G	0.177841	0.23936	upstream-variant-2KB, intron-variant	TMEM223, NXF1, MIR6514	GRCh38.p7	11:62792779	TTGTTGGCAAACTTG[C/G]GTGCTTTTATGGAGT	10482
rs2298634	snp	C/T	0.000298097	0.0122049	intron-variant	NXF1	GRCh38.p7	11:62795869	CTGGGGGTGGGACCA[C/T]GCTACAAACTCGGGA	10482
rs2509681	snp	A/T			intron-variant	NXF1	GRCh38.p7	11:62798436	CTTTTTTTTTTTTTT[A/T]TTTGAGACGGAGTTT	10482
rs2509682	snp	C/T			intron-variant	NXF1	GRCh38.p7	11:62798428	tttttttttttgaga[C/T]ggagtttcactcgtc	10482
rs2584918	snp	A/G	0.216933	0.247804			GRCh38.p7	11:62791913	CGGCCCCTGCAAGGC[A/G]CGACGCTGCAACGGG	10482
rs2850598	snp	C/G	0	0	intron-variant	NXF1	GRCh38.p7	11:62798240	gggtttcaccatgtt[C/G]gccaggctggccttg	10482
rs2956139	snp	A/G	0.0238507	0.106567	missense, downstream-variant-500B	TMEM223, NXF1	GRCh38.p7	11:62791829	TTCTGCGCGGGCCAG[A/G]GCGTCTTCTGGGCTT	10482
rs3017667	snp	C/G			intron-variant	NXF1	GRCh38.p7	11:62803173	caccaccacgcccgg[C/G]taatttttgtatttt	10482
rs3763851	snp	A/C	0.430285	0.173197	intron-variant	NXF1	GRCh38.p7	11:62804961	CCCGAGAGTTCAAGA[A/C]CGACTGGACGCAGTA	10482
rs3881262	snp	C/T	0	0	utr-variant-3-prime, intron-variant, nc-transcript-variant	NXF1	GRCh38.p7	11:62799936	CTTCCCTCCTTTGTA[C/T]TGTGATGGCCCCTCT	10482
rs5792271	in-del	-/TTTT	0.212425	0.24716	upstream-variant-2KB, intron-variant	TMEM223, NXF1, MIR6514	GRCh38.p7	11:62793083	TGTTTTTCTGTTTGC[-/TTTT]TTTTTTTTTTTGAGA	10482
rs7105855	snp	C/T	0.273049	0.248935	intron-variant	NXF1	GRCh38.p7	11:62796941	GTGCAGTGGCACACA[C/T]CTGTAGTCCCAGCTA	10482
rs10897294	snp	A/G	0.169435	0.236663	upstream-variant-2KB, downstream-variant-500B	NXF1, STX5	GRCh38.p7	11:62806406	ACACTAATCTCCCTG[A/G]ACGGTGGGTATTCTG	10482
rs11231221	snp	C/T	0.244722	0.249944	upstream-variant-2KB, downstream-variant-500B	TMEM223, NXF1	GRCh38.p7	11:62792029	TGGGGCTTCCTGCCG[C/T]AGAGCCGCCTTCCGC	10482
rs11231224	snp	G/T	0.00956916	0.0685055	upstream-variant-2KB, downstream-variant-500B	NXF1, STX5	GRCh38.p7	11:62806493	ATCAAAAGCCTCAAC[G/T]GGAGTTGGGAACAAA	10482
rs11557825	snp	C/T	0.0109286	0.0731087	upstream-variant-2KB, utr-variant-3-prime	NXF1, STX5	GRCh38.p7	11:62807264	CTCAGGCCTATGAAA[C/T]ACACAGGGTTCTAGA	10482
rs12225338	snp	A/G	0.00716266	0.059414	upstream-variant-2KB, downstream-variant-500B	NXF1, STX5	GRCh38.p7	11:62806462	TGGCTTTGATTTGGT[A/G]AAGTGCTTGGAGGGA	10482
rs12365081	snp	A/G			upstream-variant-2KB, utr-variant-3-prime	NXF1, STX5	GRCh38.p7	11:62807106	CAGGAAGGTGGGTAA[A/G]GGCATCATCTCCCTT	10482
rs12796555	snp	A/C	0	0	utr-variant-3-prime, intron-variant, nc-transcript-variant	NXF1	GRCh38.p7	11:62798881	CCCCCCTTACCTTCC[A/C]CCTACTCACCTGTGC	10482
rs28400288	snp	A/G	0.0271762	0.113356	upstream-variant-2KB, intron-variant	TMEM223, NXF1, MIR6514	GRCh38.p7	11:62793313	TGATCTCTTGACCTC[A/G]TGATCTGGCCGCCTC	10482
rs34443315	in-del	-/C			utr-variant-3-prime, intron-variant, nc-transcript-variant	NXF1	GRCh38.p7	11:62799834	ATTGCATGCCACCAG[-/C]CCCTAGGAGGCCTCA	10482
rs34495263	in-del	-/A	0.306182	0.243605	intron-variant	NXF1	GRCh38.p7	11:62798127	AGCAAGACTCCATCC[-/A]AAAAAAAAAAAAAAA	10482
rs34626575	snp	A/G	0	0	synonymous-codon, nc-transcript-variant	NXF1	GRCh38.p7	11:62801358	CTTCAATGATCCTCA[A/G]GGTAGCTGCCATACA	10482
rs34865507	in-del	-/T			intron-variant	NXF1	GRCh38.p7	11:62795537	CCCCAGGCCAAGCAC[-/T]TTTGTAAGTCACTTC	10482
rs35296297	in-del	-/A			intron-variant	NXF1	GRCh38.p7	11:62802914	CTCCCTCCCCCAACC[-/A]AAATTTTCATATTTC	10482
rs35447429	in-del	-/A			intron-variant	NXF1	GRCh38.p7	11:62804237	AGAAGCAGGATGTAG[-/A]AAATGTGAGACCCAA	10482
rs35839700	in-del	-/C			utr-variant-3-prime, intron-variant, nc-transcript-variant	NXF1	GRCh38.p7	11:62799736	CGCCTGCTGGCGGGG[-/C]CCCCAGCTCTGGTCA	10482
rs56389050	in-del	-/A			upstream-variant-2KB, intron-variant	TMEM223, NXF1, MIR6514	GRCh38.p7	11:62793843	AAAAAAAAAAAAAAA[-/A]TACAAAAATTAGCCA	10482
rs56994557	snp	A/G	0.0441095	0.141807	intron-variant	NXF1	GRCh38.p7	11:62802100	AGCCCTTGGGGAGGG[A/G]CATTACGCTGGGAGT	10482
rs61088491	snp	A/G	0.0551013	0.156571	intron-variant	NXF1	GRCh38.p7	11:62804550	ATGACCTTCTGATTC[A/G]TGCTGTGTAGGACTG	10482
rs61893770	snp	A/G	0	0	intron-variant	NXF1	GRCh38.p7	11:62798146	AAAAAAAAAAAAAGG[A/G]CCTGGTGCGAGTGGC	10482
rs71056564	in-del	-/T	0	0	upstream-variant-2KB, intron-variant	TMEM223, NXF1, MIR6514	GRCh38.p7	11:62793097	TTTTTTTTTTTTTTT[-/T]GAGACCGAGTCTTGC	10482
rs71458435	in-del	-/T	0.5	0	upstream-variant-2KB, intron-variant	TMEM223, NXF1, MIR6514	GRCh38.p7	11:62793082	TGTTTTTCTGTTTGC[-/T]TTTTTTTTTTTTTTT	10482
rs71458436	in-del	-/A	0.5	0	upstream-variant-2KB, intron-variant	TMEM223, NXF1, MIR6514	GRCh38.p7	11:62793820	AAGCCCGTCTCTACT[-/A]AAAAAAAAAAAAAAA	10482
rs71458437	in-del	-/T	0.5	0	intron-variant	NXF1	GRCh38.p7	11:62803289	CACTGTACTCCAGCC[-/T]TGGGTGACAGAGCAA	10482
rs73485689	snp	A/G	0.0562307	0.157967	utr-variant-3-prime, intron-variant, nc-transcript-variant	NXF1	GRCh38.p7	11:62799238	GGGAGAAAAGGGAGA[A/G]AGACACCCTGACACA	10482
rs74449247	snp	A/G	0.0232847	0.105357	intron-variant	NXF1	GRCh38.p7	11:62794814	TTAACTACTATGTGA[A/G]CTTTCTCTGATTTCC	10482
rs74814035	snp	C/T			missense, nc-transcript-variant	NXF1	GRCh38.p7	11:62801158	ATGCTAGACATGTCA[C/T]CCAGCCTGTACAGCC	10482
rs75592862	snp	A/G	0.00874735	0.0655527	utr-variant-5-prime, nc-transcript-variant	NXF1	GRCh38.p7	11:62805431	ACTCCCAAGCGCTCA[A/G]GACCGAAGTGTCCCT	10482
rs76498401	snp	A/C/G	0.00304137	0.0388786	intron-variant	NXF1	GRCh38.p7	11:62797166	GGGGTGGGGAGGGGG[A/C/G]ACCCTGGGATACTTA	10482
rs76934823	snp	A/G	0.0128488	0.0791159	intron-variant	NXF1	GRCh38.p7	11:62796433	AAACCCAGTGGTCCC[A/G]GGCAGATTCTGGGAT	10482
rs77243807	snp	A/C	0.5	0	intron-variant	NXF1	GRCh38.p7	11:62802758	CACTTATAATCTCTC[A/C]AAAAAAAATCAATTT	10482
rs77403482	snp	A/G	0.00488826	0.0491959	intron-variant	NXF1	GRCh38.p7	11:62803611	TGACCACAAATGCTA[A/G]GAAAGTCTTCTCAAA	10482
rs77610501	snp	A/C			utr-variant-3-prime, intron-variant, nc-transcript-variant	NXF1	GRCh38.p7	11:62798939	AGCCCAGGGGCTCCG[A/C]TGCCTCACCAGGTAT	10482
rs77618759	snp	C/T	0.00478085	0.0486577	intron-variant, upstream-variant-2KB	NXF1, MIR6514	GRCh38.p7	11:62794091	AGGACAGCTTGTGCC[C/T]AGGAATTAGAGGCTA	10482
rs77993038	snp	A/G	0.0142736	0.0832652	intron-variant	NXF1	GRCh38.p7	11:62802770	CTCAAAAAAAAATCA[A/G]TTTTATTTATTCTAA	10482
rs78194278	snp	A/T	0.00318978	0.0398085	intron-variant	NXF1	GRCh38.p7	11:62795832	GTAGCTGGGAAGCTA[A/T]GAGTGCTGAGGAAAA	10482
rs78433686	snp	C/T	0.0337553	0.125452	intron-variant, upstream-variant-2KB	NXF1, MIR6514	GRCh38.p7	11:62794764	GGATGAAAACCCAGA[C/T]GGTACAATTCCAGAG	10482
rs78694490	snp	A/G	0.00159617	0.0282053	intron-variant, upstream-variant-2KB	NXF1, MIR6514	GRCh38.p7	11:62794689	AAACTTAGGAAATGA[A/G]TATTGTTATATGAAT	10482
rs78829240	snp	A/G	0.0232847	0.105357	upstream-variant-2KB	NXF1	GRCh38.p7	11:62806268	CTCCTAGACCCCCAA[A/G]AGCACCACCACCAGC	10482
rs79134972	snp	A/G	0	0	intron-variant	NXF1	GRCh38.p7	11:62798143	AAAAAAAAAAAAAAA[A/G]GGGCCTGGTGCGAGT	10482
rs79324007	snp	C/T	0.00676061	0.057746	upstream-variant-2KB, intron-variant	TMEM223, NXF1, MIR6514	GRCh38.p7	11:62792778	CACTCCATAAAAGCA[C/T]CCAAGTTTGCCAACA	10482
rs111331941	in-del	-/C	0.5	0	intron-variant	NXF1	GRCh38.p7	11:62797084	AAAAAAAAAAAAAAA[-/C]AAAACAAAAAACAAA	10482
rs111401731	snp	A/C/G	0.00183264	0.0302156	utr-variant-5-prime, nc-transcript-variant	NXF1	GRCh38.p7	11:62805374	CACAGCGAAGATCAA[A/C/G]GGCGGGCTCAGGCGC	10482
rs111684491	snp	A/C	0.5	0	utr-variant-3-prime, missense, upstream-variant-2KB, intron-variant	NXF1, MIR6514	GRCh38.p7	11:62794424	GCACAAATAGCTCAT[A/C]ATTTACAATACATAG	10482
rs111950515	snp	A/C	0.0414363	0.137845	utr-variant-5-prime, nc-transcript-variant	NXF1	GRCh38.p7	11:62805476	CGCATTTATACAGCA[A/C]AGCACGTCGCGCGCC	10482
rs111966744	snp	G/T	0.5	0	upstream-variant-2KB, intron-variant	TMEM223, NXF1, MIR6514	GRCh38.p7	11:62793563	ATGCCTGTAGTCCCA[G/T]CTACTCAGGTGGCTG	10482
rs112043892	snp	A/C/G	1.64735e-05	0.00286993	upstream-variant-2KB, utr-variant-3-prime, downstream-variant-500B, nc-transcript-variant	TMEM223, NXF1, MIR6514	GRCh38.p7	11:62792455	TTTACAGGGGGGACT[A/C/G]CTTCTGAGGCATGAC	10482
rs112335937	snp	A/T	0.000273075	0.0116817	intron-variant	NXF1	GRCh38.p7	11:62804175	GGGAAAAGTTACTGG[A/T]AAACTGTGTAGGGCT	10482
rs112714659	in-del	-/CTAACATTC	0.5	0	intron-variant	NXF1	GRCh38.p7	11:62804678	ACATAGAAGGCGCAG[-/CTAACATTC]ACTGAGAACTTTCTC	10482
rs112813447	snp	C/T	0.5	0	upstream-variant-2KB	NXF1	GRCh38.p7	11:62805499	CGCGCGCCGCTGACG[C/T]CCCAGGCTGTGGGCG	10482
rs113286052	snp	C/G	0.5	0	missense, nc-transcript-variant	NXF1	GRCh38.p7	11:62805348	GTACGACTTCCCCTC[C/G]TCCGCCATGCCACAG	10482
rs113503642	snp	A/G	0.5	0	upstream-variant-2KB, intron-variant	TMEM223, NXF1, MIR6514	GRCh38.p7	11:62793610	TGAGCCCTAGCAGTT[A/G]AGGCTGCAGTGAACT	10482
rs113557276	snp	A/C	0.5	0	intron-variant	NXF1	GRCh38.p7	11:62797089	AAAAAAAAAACAAAA[A/C]AAAAAACAAAACAAA	10482
rs113601386	snp	C/T	0.444444	0.157135	intron-variant	NXF1	GRCh38.p7	11:62797144	CCCACCATTCCCCCT[C/T]AACCTCGGGGTGGGG	10482
rs113901554	snp	G/T	0.00115245	0.023977	upstream-variant-2KB, intron-variant, downstream-variant-500B	TMEM223, NXF1, MIR6514	GRCh38.p7	11:62792527	GGCCTGGAGAAAAAT[G/T]AAGGTCAGTAGAGGT	10482
rs113993569	snp	C/T	0.444444	0.157135	intron-variant	NXF1	GRCh38.p7	11:62804544	AGGAAGATGACCTTC[C/T]GATTCATGCTGTGTA	10482
rs114333528	snp	A/G	0.00196523	0.0312851	intron-variant	NXF1	GRCh38.p7	11:62802164	CCAGCCAGCCACTCA[A/G]GCCTTGTCTTACCTC	10482
rs114397144	snp	A/C	0.0158469	0.0875917	utr-variant-3-prime, intron-variant, nc-transcript-variant	NXF1	GRCh38.p7	11:62799268	AGCCCTTTCTTTCAG[A/C]TGCCCCATCCCTGTG	10482
rs114976329	snp	A/G	0.00914312	0.0669923	upstream-variant-2KB, utr-variant-3-prime	NXF1, STX5	GRCh38.p7	11:62807107	AGGAAGGTGGGTAAG[A/G]GCATCATCTCCCTTT	10482
rs115224284	snp	C/T	0.0185938	0.0946107	intron-variant	NXF1	GRCh38.p7	11:62797818	GAAGTCAAGTGTAAA[C/T]GCATCATGAAAAGTA	10482
rs115432554	snp	C/T	0.0532157	0.154195	intron-variant	NXF1	GRCh38.p7	11:62802831	GCCCCTCAGAGAACT[C/T]CAGGGCACTCCAGGG	10482
rs115702320	snp	A/G	0.00716266	0.059414	intron-variant	NXF1	GRCh38.p7	11:62803678	CTGTTTAATCACTAA[A/G]CTAGTCCTGGCATTT	10482
rs116085107	snp	A/T	0.0228947	0.104514	intron-variant	NXF1	GRCh38.p7	11:62803323	TCCATTTAAAAAAAA[A/T]AATAATAATAATTTT	10482
rs116591122	snp	G/T	0.00318978	0.0398085	intron-variant	NXF1	GRCh38.p7	11:62804599	CTAACTCCCAAAAGA[G/T]GTCTGCCTAATACCC	10482
rs116823129	snp	A/C	0.00597247	0.0543191	intron-variant	NXF1	GRCh38.p7	11:62804474	AATTCTAGACTCAGG[A/C]TCTAGTGGCAGTGCC	10482
rs117263999	snp	C/T	0.0023933	0.0345097	intron-variant	NXF1	GRCh38.p7	11:62795998	AGAGCCTGAGTGCCC[C/T]CCCTTGCCTATTAAA	10482
rs117327300	snp	C/G	0.000798403	0.0199641	intron-variant	NXF1	GRCh38.p7	11:62800824	GCTCAGGCTAGAATG[C/G]AACGGCACAATCATA	10482
rs118167825	snp	C/T	0.0641038	0.16716	missense, downstream-variant-500B	TMEM223, NXF1	GRCh38.p7	11:62791879	AAGCGGCCCCGATCA[C/T]GCTCAAAGAGCAGCA	10482
rs138084535	snp	C/G/T	1.648e-05	0.0028705	missense, nc-transcript-variant	NXF1	GRCh38.p7	11:62803907	TACGGTTTCCTTCAC[C/G/T]ATATTTCCACCGGAA	10482
rs138160443	snp	C/T	0.000798403	0.0199641	upstream-variant-2KB, intron-variant	TMEM223, NXF1, MIR6514	GRCh38.p7	11:62792874	GTTCTACCAATGGCT[C/T]CTCAAAGATAAGGAA	10482
rs138193807	snp	C/G/T	9.90437e-05	0.00703659	utr-variant-3-prime, missense, upstream-variant-2KB, nc-transcript-variant	NXF1, MIR6514	GRCh38.p7	11:62794271	ACTTCTGGGACCACT[C/G/T]GAGGTTCATGCCAGA	10482
rs138285302	snp	C/T	0.0023933	0.0345097	intron-variant	NXF1	GRCh38.p7	11:62800564	TACCCCCAGTCCCTA[C/T]GCTTAGCTCTGAGAT	10482
rs138988501	snp	G/T	0.00159617	0.0282053	utr-variant-3-prime, intron-variant, nc-transcript-variant	NXF1	GRCh38.p7	11:62800132	AAAAGGTTGTGTTCA[G/T]GAAGAAAGAGAAAGG	10482
rs139081574	snp	A/G	0.000198778	0.00996741	intron-variant	NXF1	GRCh38.p7	11:62795859	AAAATTCCAGCTGGG[A/G]GTGGGACCACGCTAC	10482
rs139190483	snp	C/T	0.0146672	0.084371	intron-variant	NXF1	GRCh38.p7	11:62805049	GTCAGGCCGCCAAAC[C/T]TAACTGACAGGCATC	10482
rs139389102	snp	C/T	0.00318978	0.0398085	upstream-variant-2KB, intron-variant	TMEM223, NXF1, MIR6514	GRCh38.p7	11:62793558	GGCCTATGCCTGTAG[C/T]CCCAGCTACTCAGGT	10482
rs139771808	snp	A/C	3.29457e-05	0.00405854	utr-variant-3-prime, synonymous-codon, nc-transcript-variant	NXF1	GRCh38.p7	11:62797348	CGTCGTGGGGGCTTC[A/C]ACATCAAAGGCAATT	10482
rs139794879	snp	C/T	0.00487104	0.04911	missense, nc-transcript-variant	NXF1	GRCh38.p7	11:62803841	TTGCCACATCTCCAT[C/T]ATCTTCCTCAAGGCG	10482
rs139996469	snp	A/C/G	0.00318978	0.0398085	intron-variant	NXF1	GRCh38.p7	11:62797689	CCAGCCTGGATGACA[A/C/G]AGCCAGACCCTGTCT	10482

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