iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

SNP - dbSNP
dbSNP	Type	Alleles	Het	Se(het)	Fxn-class	Gene Name	Assembly	Chr-pos	Sequence	Entrez Gene
rs872024	snp	C/T	0.0178098	0.0926698	downstream-variant-500B	IFT122	GRCh38.p7	3:129520526	CGGCTCCGAGTTGTT[C/T]GTGGCAGCCTGCTGG	55764
rs1872104	snp	C/G	0.121717	0.214577	intron-variant	IFT122	GRCh38.p7	3:129502506	TACAGGATCCTGTCA[C/G]CCACCTTGTGTGTCT	55764
rs1872105	snp	C/T	0.278133	0.248412	intron-variant	IFT122	GRCh38.p7	3:129502139	CCTGCAGGAAGTCTT[C/T]CCTGTCCTCCTGGCC	55764
rs1872106	snp	C/G	0.319856	0.240042	downstream-variant-500B	IFT122	GRCh38.p7	3:129520836	GACAAGAGAAAATAC[C/G]TGGGTCCAAAGAAGA	55764
rs1872107	snp	C/G/T	0.121717	0.214577	downstream-variant-500B	IFT122	GRCh38.p7	3:129520959	GCCCCACAGAGCAGC[C/G/T]CCAGCCCAATGGAGA	55764
rs2260840	snp	C/G/T	0.499831	0.00918375	intron-variant	IFT122	GRCh38.p7	3:129515416	CAGGCCCCAGGGGCC[C/G/T]GAAGCCAGAGTCCAG	55764
rs2285349	snp	C/T	0.280785	0.248097	intron-variant, upstream-variant-2KB	IFT122	GRCh38.p7	3:129458503	AGAAGCTAACACTTA[C/T]TAGGTACCTTAAAGA	55764
rs2285350	snp	G/T	0.280785	0.248097	intron-variant	IFT122	GRCh38.p7	3:129469180	ATCCCGTAAGACTGA[G/T]TGATGGGTTGGGCCA	55764
rs2285351	snp	C/T	0.266546	0.249452	intron-variant	IFT122	GRCh38.p7	3:129469237	CTGTACAACATTTGG[C/T]AACCTGAGGCCAGGA	55764
rs2285352	snp	A/C	0.29046	0.246704	intron-variant	IFT122	GRCh38.p7	3:129481929	TTTCCTTGCCAATGG[A/C]AACCGAAGGCTCTGA	55764
rs2285353	snp	A/C	0.214843	0.247516	intron-variant	IFT122	GRCh38.p7	3:129492024	AATCTGTGCTTGCTC[A/C]CTTCCTCTCCTCTGT	55764
rs2285354	snp	C/G	0.413622	0.18918	intron-variant	IFT122	GRCh38.p7	3:129492134	ATTCTTTATTTCTTC[C/G]CCACAGGCCTTCATC	55764
rs2285355	snp	C/G	0.265727	0.249505	intron-variant	IFT122	GRCh38.p7	3:129512590	GCAGGGAGGCCCAGG[C/G]GCCCAGGCCAAGAGA	55764
rs2301570	snp	C/T	0.148056	0.228271	intron-variant	IFT122	GRCh38.p7	3:129476820	AGAGGCAGGTCCAGA[C/T]CTTGGGAAGAGGGAC	55764
rs2307292	snp	A/T	0.000798403	0.0199641	utr-variant-5-prime, upstream-variant-2KB	MBD4, IFT122	GRCh38.p7	3:129439948	GGGCGCTTTCGCAAC[A/T]TTCAGACCTCGGTTG	55764
rs2307297	snp	C/T	0.000861738	0.0207395	synonymous-codon, upstream-variant-2KB, utr-variant-5-prime	MBD4, IFT122	GRCh38.p7	3:129439803	CTGGAGAGTCTGAGT[C/T]TGGGGGACCGCGGAG	55764
rs2311394	snp	C/T	0.328616	0.237317	upstream-variant-2KB, intron-variant	MBD4, IFT122	GRCh38.p7	3:129440996	tcattttgagcacct[C/T]tctgatcatacctgc	55764
rs2625940	snp	A/T	0.0150606	0.0854603	intron-variant	IFT122	GRCh38.p7	3:129512704	TGCTTCTTCCATTTC[A/T]GTCACACCCTCATCT	55764
rs2625941	snp	C/T	0.117537	0.212022	intron-variant	IFT122	GRCh38.p7	3:129501131	TCCGGTGTGCTGAGT[C/T]CCAAGGCTGAATCCA	55764
rs2626007	snp	A/G	0.121717	0.214577	intron-variant	IFT122	GRCh38.p7	3:129518136	TGGGGGCACCACGGG[A/G]ATGCCAAAGAATGAA	55764
rs2626008	snp	A/C	0.121717	0.214577	intron-variant	IFT122	GRCh38.p7	3:129518135	GGGGGCACCACGGGA[A/C]TGCCAAAGAATGAAG	55764
rs2713619	snp	C/T	0.117886	0.21224	intron-variant	IFT122	GRCh38.p7	3:129513921	CTGCACACCCTTCCC[C/T]GAGGGCCTGGTGGGC	55764
rs2713620	snp	C/T	0.119281	0.213102	intron-variant	IFT122	GRCh38.p7	3:129513845	TCAGCCAGAGGCTGA[C/T]GAGCCTTTGTGCTCT	55764
rs2713621	snp	A/C	0.499713	0.0119774	intron-variant	IFT122	GRCh38.p7	3:129505288	CAAACACCCAACTTC[A/C]ATTAGAAGGCTAAAT	55764
rs2713622	snp	A/G	0.17332	0.23795	intron-variant	IFT122	GRCh38.p7	3:129503364	TAGTGGTTGTGGGGT[A/G]GGGGCAGAGAAGGGA	55764
rs3138322	snp	C/G	0.281049	0.248064	upstream-variant-2KB, intron-variant	MBD4, IFT122	GRCh38.p7	3:129441944	CTGCCCCTTTTAGGC[C/G]GAGCATGAGCTCTGC	55764
rs3138323	snp	C/G	0.280785	0.248097	upstream-variant-2KB, intron-variant	MBD4, IFT122	GRCh38.p7	3:129441438	agagagtggtgaaga[C/G]acaacgagataaagg	55764
rs3138324	snp	C/G	0.0614824	0.164198	upstream-variant-2KB, intron-variant	MBD4, IFT122	GRCh38.p7	3:129441351	CACAAAAGAGAGGAC[C/G]CGTCTCCAACGTGAG	55764
rs3138325	snp	C/T	0.00336134	0.0408579	upstream-variant-2KB, intron-variant	MBD4, IFT122	GRCh38.p7	3:129441350	ACAAAAGAGAGGACC[C/T]GTCTCCAACGTGAGC	55764
rs3138326	snp	A/T	0.280785	0.248097	upstream-variant-2KB, intron-variant	MBD4, IFT122	GRCh38.p7	3:129441186	GCTGAATGATTTTCA[A/T]AGTCAGGCCAAGACC	55764
rs3138327	snp	C/G	0.00676609	0.0577691	upstream-variant-2KB, intron-variant	MBD4, IFT122	GRCh38.p7	3:129441132	AAAACAGACTGCTAT[C/G]TTATAGATTTAGGCG	55764
rs3138328	snp	A/G	0.0539704	0.155153	upstream-variant-2KB, intron-variant	MBD4, IFT122	GRCh38.p7	3:129441101	ATAACAATGGAATAG[A/G]ACATTAAATAACTGA	55764
rs3138329	snp	A/T	0.0126979	0.078662	upstream-variant-2KB, intron-variant	MBD4, IFT122	GRCh38.p7	3:129441000	gtgctcattttgagc[A/T]cctttctgatcatac	55764
rs3138330	snp	A/G	0.0110494	0.0735024	upstream-variant-2KB, intron-variant	MBD4, IFT122	GRCh38.p7	3:129440836	TGATTTTATCTTAAC[A/G]tttagagcaagtgac	55764
rs3138331	snp	C/T	0.281049	0.248064	upstream-variant-2KB, intron-variant	MBD4, IFT122	GRCh38.p7	3:129440835	GATTTTATCTTAACA[C/T]TTAGAGCAAGTGACA	55764
rs3138332	snp	C/T	0.0236746	0.106192	upstream-variant-2KB, intron-variant	MBD4, IFT122	GRCh38.p7	3:129440786	gtaataaagtttcct[C/T]gtaaaatgtgaaatc	55764
rs3138333	snp	C/T	0.00557542	0.0525036	upstream-variant-2KB, intron-variant	MBD4, IFT122	GRCh38.p7	3:129440634	ATGAATCCAAGGCAG[C/T]GACAGGGCCAGACCG	55764
rs3138334	snp	C/T	0.0614824	0.164198	utr-variant-5-prime, upstream-variant-2KB	MBD4, IFT122	GRCh38.p7	3:129440125	AAGCAGCAAAAGCAA[C/T]GGTGGCACTGGAGCC	55764
rs3138335	snp	C/T	0.0119091	0.0762411	intron-variant, upstream-variant-2KB	MBD4, IFT122	GRCh38.p7	3:129439443	AGGAAGTCATTAGAC[C/T]ACGTGTGTGATAGGA	55764
rs3138336	snp	A/G	0.0142736	0.0832652	intron-variant, upstream-variant-2KB	MBD4, IFT122	GRCh38.p7	3:129439426	CGTGTGTGATAGGAG[A/G]TTAAGATTTACCTAC	55764
rs3138337	snp	G/T	0.0459516	0.144445	intron-variant, upstream-variant-2KB	MBD4, IFT122	GRCh38.p7	3:129439425	GTGTGTGATAGGAGG[G/T]TAAGATTTACCTACT	55764
rs3138338	snp	C/T	0.278664	0.248351	intron-variant, upstream-variant-2KB	MBD4, IFT122	GRCh38.p7	3:129438921	tttgagatgaggtct[C/T]gctctgtcacccagg	55764
rs3733144	snp	C/T	0	0	intron-variant, utr-variant-3-prime	IFT122	GRCh38.p7	3:129506922	CTCCAGATTCTTACT[C/T]ATCCCAGCCAGGAAA	55764
rs3733145	snp	C/T	0.191775	0.243125	intron-variant, utr-variant-3-prime	IFT122	GRCh38.p7	3:129507124	TGAGCTCTGCATGCC[C/T]ATCTGTCCTGTGGGA	55764
rs3774764	snp	C/T	0.00478085	0.0486577	intron-variant	IFT122	GRCh38.p7	3:129449806	AATAAAGTTTACTTT[C/T]CTGGCCATTAGCAGA	55764
rs3774765	snp	C/G	0.0150606	0.0854603	intron-variant	IFT122	GRCh38.p7	3:129449811	AGTTTACTTTCCTGG[C/G]CATTAGCAGACTTCA	55764
rs3774766	snp	C/G	0.00358779	0.0422022	intron-variant	IFT122	GRCh38.p7	3:129451601	TTTAGGAGGGCCTGC[C/G]TTGATCAATCATATA	55764
rs3774767	snp	C/G	0.463774	0.129618	intron-variant	IFT122	GRCh38.p7	3:129474067	GCTAGGGAAAGTTTT[C/G]GTTGCTAGGCATTTG	55764
rs3774768	snp	C/T	0.463774	0.129618	intron-variant	IFT122	GRCh38.p7	3:129482251	GTTGTAGGCGTTGTT[C/T]AGTGGAGTCATCCAG	55764
rs3774769	snp	A/G	0.213937	0.247385	intron-variant	IFT122	GRCh38.p7	3:129493428	CTCTGTGCCACATGC[A/G]TGATTTATGTGAATG	55764
rs3774770	snp	C/G	0.290718	0.246662	intron-variant	IFT122	GRCh38.p7	3:129495737	CAGAAAGGATGTGGG[C/G]AAACTGGTAAACAAA	55764
rs3774771	snp	A/G	0.215446	0.2476	intron-variant	IFT122	GRCh38.p7	3:129495814	TAAGGCTGACACCAA[A/G]GGGGCAGACTATGGC	55764
rs3774772	snp	A/G	0.0551013	0.156571	intron-variant	IFT122	GRCh38.p7	3:129495846	GTTCAGACCTTCATC[A/G]GTGACAGGGCTGGAT	55764
rs3774773	snp	C/T	0.460252	0.135255	intron-variant	IFT122	GRCh38.p7	3:129495926	GGCTTCAGGGCTGTC[C/T]CCCACAAATCCTCTC	55764
rs3774774	snp	A/G	0.498133	0.030494	intron-variant	IFT122	GRCh38.p7	3:129497829	TGATTAACGTGGCAT[A/G]TTTTTGTTTACTTGA	55764
rs3774775	snp	A/C	0.192088	0.2432	intron-variant	IFT122	GRCh38.p7	3:129497846	TTTTGTTTACTTGAA[A/C]ATTGCTTCCCAAGAT	55764
rs3774776	snp	G/T	0.0490535	0.14873	intron-variant	IFT122	GRCh38.p7	3:129498348	CTCCAGCTGCCACCC[G/T]CATTTCACCAGCCAG	55764
rs3774778	snp	G/T	0.0681886	0.171594	intron-variant	IFT122	GRCh38.p7	3:129501705	TGCTTTCCAGATGTG[G/T]CTATAAAAGGTGTCT	55764
rs3774779	snp	C/G	0.265727	0.249505	intron-variant	IFT122	GRCh38.p7	3:129503446	GTGGCCAGCCTCAGG[C/G]TGGCAGAAGCAGCTG	55764
rs3774780	snp	G/T	0.187685	0.242109	intron-variant	IFT122	GRCh38.p7	3:129505263	ACCTGATTTTTCTGT[G/T]TTGCTGCCTATTTAG	55764
rs3774782	snp	A/G	0.000399281	0.0141238	intron-variant	IFT122	GRCh38.p7	3:129512083	atctatctaggtgtc[A/G]gtttcctcatcagta	55764
rs3774783	snp	C/T	0.26518	0.249539	intron-variant	IFT122	GRCh38.p7	3:129513511	GTCTCCGTCTTTCCC[C/T]GTAGGAGCAGTCAGG	55764
rs3774784	snp	C/T	0.00755907	0.0610114	intron-variant	IFT122	GRCh38.p7	3:129518252	TGGCAGTGAAAGCCC[C/T]GGGGCACAGCTCAGC	55764
rs3806711	snp	A/G	0.386123	0.209692	intron-variant	IFT122	GRCh38.p7	3:129496202	AGGTTCATGGGGGCC[A/G]TCCCAATGCAAAAGG	55764
rs3821913	snp	C/T	0.215446	0.2476	intron-variant	IFT122	GRCh38.p7	3:129494074	TTCTTGTCCTGCTGA[C/T]GGGGGGAAAGAACCT	55764
rs3821914	snp	A/G	0.499642	0.0133738	intron-variant	IFT122	GRCh38.p7	3:129501144	GGGACTCAGCACACC[A/G]GACCTTGAGGGGGAA	55764
rs3821915	snp	A/G	0.198324	0.244601	intron-variant	IFT122	GRCh38.p7	3:129501153	CACACCGGACCTTGA[A/G]GGGGAAGGCTTTGTC	55764
rs3832258	in-del	-/AGA			cds-indel	IFT122	GRCh38.p7	3:129488367	GGCCATGGAAGCGCT[-/AGA]AGGTTTAGATTTTGA	55764
rs3836535	in-del	-/C			intron-variant	IFT122	GRCh38.p7	3:129496398	CAATGAGGGTCTTCC[-/C]TTCCATCAAGGGGCT	55764
rs3836536	in-del	-/C	0.151001	0.229563	intron-variant	IFT122	GRCh38.p7	3:129497821	TCTAGTCCTGATTAA[-/C]GTGGCATATTTTTGT	55764
rs3836537	in-del	-/GCA			intron-variant	IFT122	GRCh38.p7	3:129499422	CAGCCTCACTCTGAA[-/GCA]TGTGGTATCACCCAT	55764
rs3836538	in-del	-/ACCTC/ACCTG	0.5	0	intron-variant	IFT122	GRCh38.p7	3:129504912	GTGAGGCATGGTCTC[-/ACCTC/ACCTG]TACTGAGAATAGAAA	55764
rs4352374	snp	A/G	0.0422008	0.138995	intron-variant	IFT122	GRCh38.p7	3:129489469	ACAAGGGAAGTGATC[A/G]TTGTGTAACAATGAT	55764
rs4441648	snp	C/G	0.284471	0.247612	intron-variant	IFT122	GRCh38.p7	3:129499605	GCCCCAAATAGTCTA[C/G]AAAGTGTTGTTTAGC	55764
rs4456858	snp	A/C	0.267364	0.249396	intron-variant	IFT122	GRCh38.p7	3:129447415	cctgggatcaacaga[A/C]aggaatgtctgggtt	55764
rs4600811	snp	G/T	0.264358	0.249587	intron-variant	IFT122	GRCh38.p7	3:129487416	GTCTCGGTCTCCTGG[G/T]CTGTAGCCAGGGAGA	55764
rs4640556	snp	A/G	0.499673	0.0127754	intron-variant	IFT122	GRCh38.p7	3:129487455	CTACTGCACAGGACT[A/G]TGGGGACAGCCAAAA	55764
rs4688850	snp	C/T	0.241053	0.24984	intron-variant	IFT122	GRCh38.p7	3:129451462	CTCCTACTTGAAAGC[C/T]CAGAGTTCTGTGACT	55764
rs6439183	snp	G/T	0.281049	0.248064	intron-variant	IFT122	GRCh38.p7	3:129471158	GTGAAGCCTTTAATT[G/T]CGTAGCATCCTTATT	55764
rs6439184	snp	A/G	0.499741	0.0113788	intron-variant	IFT122	GRCh38.p7	3:129518742	CTGGGGTCAGCAGGG[A/G]CTCTCGCCCCTGTCT	55764
rs6767707	snp	A/G	0.463774	0.129618	intron-variant, upstream-variant-2KB	IFT122	GRCh38.p7	3:129475606	gcagtaagccaagat[A/G]gcgccactgcactcc	55764
rs6770233	snp	C/T	0.4983	0.0291038	intron-variant	IFT122	GRCh38.p7	3:129466798	GTGAGTCACTGCACC[C/T]GGCCCCCAGGGGCTC	55764
rs6771214	snp	A/G	0.117537	0.212022	intron-variant	IFT122	GRCh38.p7	3:129470761	ttttagtagagacgg[A/G]gtttctccatgttgg	55764
rs6774638	snp	C/G	0.126219	0.217206	intron-variant	IFT122	GRCh38.p7	3:129447607	aacctctgtctcccg[C/G]gttcaagcaattctc	55764
rs6777036	snp	C/T	0.281049	0.248064	intron-variant	IFT122	GRCh38.p7	3:129447725	accatgttggtcagg[C/T]tggcctcaaactcct	55764
rs6777052	snp	C/T	0.281577	0.247998	intron-variant	IFT122	GRCh38.p7	3:129447757	acctcgtgatccgcc[C/T]gcctcggcctcccaa	55764
rs6781214	snp	A/G	0.21725	0.247846	intron-variant, utr-variant-3-prime	IFT122	GRCh38.p7	3:129507253	TTGGGCCAGTGCCTT[A/G]TGCTTCTGATAGGAG	55764
rs6781426	snp	G/T	0.0614824	0.164198	intron-variant	IFT122	GRCh38.p7	3:129479566	GGCTGCCTGGGTGGG[G/T]GTTTGCATTGAAGAT	55764
rs6784396	snp	A/T	0.126219	0.217206	intron-variant	IFT122	GRCh38.p7	3:129471077	GGAAATGCCAAGGAT[A/T]AGAGTAAAGGTGCTG	55764
rs6786176	snp	C/G	0.282105	0.24793	intron-variant	IFT122	GRCh38.p7	3:129496372	GGTTCAAAGAGGCTT[C/G]GGTACACTGGGCAAT	55764
rs6786195	snp	C/T	0.281313	0.248031	intron-variant	IFT122	GRCh38.p7	3:129452341	AAAAGGTAAATTAAG[C/T]AGTATGCTGGAAGGT	55764
rs6789079	snp	A/G	0.498832	0.0241331	intron-variant	IFT122	GRCh38.p7	3:129461746	CTTGTGCAATTTGTC[A/G]TCATTACTGGTTTAG	55764
rs6789779	snp	A/G	0.126219	0.217206	intron-variant	IFT122	GRCh38.p7	3:129497290	ataataaaaTGCCTG[A/G]CCTTGGTGCCCCAGA	55764
rs6795952	snp	C/G	0.162253	0.234095	intron-variant	IFT122	GRCh38.p7	3:129498703	CATACATTGACTGTA[C/G]TTTTCTGACACATGA	55764
rs6799876	snp	G/T	0.213453	0.247314	intron-variant	IFT122	GRCh38.p7	3:129500101	CCCCGAGAAGCATTT[G/T]GCAGCATGTCATCAC	55764
rs6802395	snp	G/T	0.498158	0.0302955	intron-variant	IFT122	GRCh38.p7	3:129497279	GTCAAAAAAAAATAA[G/T]AAAATGCCTGGCCTT	55764
rs6805886	snp	A/C	0	0	intron-variant	IFT122	GRCh38.p7	3:129466818	CCCAGGGGCTCCTTG[A/C]CAGGATTTTAAATTA	55764
rs6809071	snp	C/T	0.216349	0.247725	intron-variant	IFT122	GRCh38.p7	3:129508466	ggaaggactgtcacc[C/T]ccatgttacagatga	55764
rs7429444	snp	A/G	0.00517822	0.0506191	intron-variant	IFT122	GRCh38.p7	3:129489482	TCGTTGTGTAACAAT[A/G]ATCTAGATTATATTT	55764
rs7610149	snp	G/T	0.463666	0.129795	intron-variant	IFT122	GRCh38.p7	3:129483801	GAATGGCAGCTGTGA[G/T]GTCGTGGGAGGCAGT	55764

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