SNP - dbSNP |
dbSNP | Type | Alleles | Het | Se(het) | Fxn-class | Gene Name | Assembly | Chr-pos | Sequence | Entrez Gene |
rs731684 | snp | A/G | 0.444931 | 0.15653 | utr-variant-3-prime, downstream-variant-500B, nc-transcript-variant | POC1A | GRCh38.p7 | 3:52075825 | CCAGGGATTTGTACC[A/G]TGGGACTTGGGTAAA | 25886 |
rs735768 | snp | A/C | 0.448708 | 0.151707 | intron-variant | POC1A | GRCh38.p7 | 3:52140954 | CGGCTTTGGACTTGA[A/C]AAAAAGTGGATCATG | 25886 |
rs747343 | snp | C/T | 0.449218 | 0.151037 | utr-variant-3-prime, nc-transcript-variant | POC1A | GRCh38.p7 | 3:52075391 | TGAGAGGGCTTGTTC[C/T]CAACAAACCTGACTC | 25886 |
rs749995 | snp | C/T | 0.448452 | 0.152042 | intron-variant | POC1A | GRCh38.p7 | 3:52142685 | AGGGGAGACACTGCA[C/T]GTCACTGTGTCCGTA | 25886 |
rs893055 | snp | A/G | 0.451856 | 0.147493 | intron-variant | POC1A | GRCh38.p7 | 3:52143332 | GGGAGCAGGCTTGGC[A/G]GAGGGCAGGGGCGGA | 25886 |
rs893056 | snp | A/G | 0.215747 | 0.247642 | utr-variant-3-prime, downstream-variant-500B, nc-transcript-variant | POC1A | GRCh38.p7 | 3:52075548 | GAAAATCAAGGCATC[A/G]TGGAGCCACCTCCTC | 25886 |
rs920160 | snp | G/T | 0.277334 | 0.248501 | intron-variant | POC1A | GRCh38.p7 | 3:52123710 | TTGGCATTGTCTATT[G/T]GCATTCATGATAGCC | 25886 |
rs1108932 | snp | C/G | 0.030278 | 0.119257 | intron-variant | POC1A | GRCh38.p7 | 3:52083530 | CCCCTTCTTTCAGCC[C/G]CAGCCTCTTTTTCTC | 25886 |
rs2164558 | snp | A/G | 0.0748431 | 0.178382 | intron-variant | POC1A | GRCh38.p7 | 3:52143684 | AAAGTAGGGGCTGGC[A/G]TCAGAGTGGGGGATG | 25886 |
rs2276835 | snp | A/C | 0.00835141 | 0.0640778 | intron-variant | POC1A | GRCh38.p7 | 3:52096871 | CGTGGCGGTGTTCCC[A/C]CATCTGGGTCCACAC | 25886 |
rs2304505 | snp | A/G | 0.230896 | 0.249269 | intron-variant | POC1A | GRCh38.p7 | 3:52150744 | GGGTCTTTTCTGCAC[A/G]CCCTAGCCACCTTTT | 25886 |
rs2334961 | snp | C/G | 0.448963 | 0.151372 | intron-variant | POC1A | GRCh38.p7 | 3:52139609 | GATGGGAGGCTTGTG[C/G]TGCTTTGGAAGGACA | 25886 |
rs4687609 | snp | G/T | 0.275197 | 0.248727 | intron-variant | POC1A | GRCh38.p7 | 3:52106575 | AAAATGAAGGATGGG[G/T]AATCTGCATGCCTGA | 25886 |
rs4687802 | snp | A/G | 0.26518 | 0.249539 | intron-variant | POC1A | GRCh38.p7 | 3:52077035 | GACCAGAGCAAGCCT[A/G]CCCCACTCATCACTT | 25886 |
rs4687805 | snp | A/G | 0.447162 | 0.153712 | intron-variant | POC1A | GRCh38.p7 | 3:52089297 | CAGGGCTGGGGAATC[A/G]CCAGGGGCCCAGGCA | 25886 |
rs4687806 | snp | A/G | 0.265453 | 0.249522 | intron-variant | POC1A | GRCh38.p7 | 3:52110166 | GAGCATTTTTTATGT[A/G]TCAGACACATACTGA | 25886 |
rs4687808 | snp | C/G | 0.266546 | 0.249452 | intron-variant | POC1A | GRCh38.p7 | 3:52133757 | ACCCCAAACCTCCCC[C/G]ACGGTTTCCCCAGAG | 25886 |
rs4687809 | snp | A/G | 0.266546 | 0.249452 | intron-variant | POC1A | GRCh38.p7 | 3:52133959 | GTAGCCCTCTCTCTC[A/G]CAGCTCTCCCAAGCC | 25886 |
rs4687810 | snp | C/T | 0.448963 | 0.151372 | intron-variant | POC1A | GRCh38.p7 | 3:52135079 | TGAGGACTCTATACC[C/T]GCTGCAGAGTGCCCA | 25886 |
rs5848943 | in-del | -/C | | | intron-variant | POC1A | GRCh38.p7 | 3:52116261 | CCTGTGGCAGTGCCC[-/C]AAAAATGGAAATGTG | 25886 |
rs6445259 | snp | A/G | 0.046775 | 0.145601 | intron-variant | POC1A | GRCh38.p7 | 3:52133157 | catgaaggggattag[A/G]tgcacttatgaaagg | 25886 |
rs6769277 | snp | C/T | 0.0023933 | 0.0345097 | intron-variant | POC1A | GRCh38.p7 | 3:52091540 | TCAAGTGTCTATGTG[C/T]ACCCCAGTGCCTCTG | 25886 |
rs6773704 | snp | A/G | 0.449218 | 0.151037 | intron-variant | POC1A | GRCh38.p7 | 3:52129173 | AATCCCAGCTACTCG[A/G]GAGGCTGAGGCAGGA | 25886 |
rs6777340 | snp | C/T | 0.449345 | 0.150869 | intron-variant | POC1A | GRCh38.p7 | 3:52154292 | CCATCGCTCTGGCCA[C/T]TAGGCGCCCAGTGTC | 25886 |
rs6778442 | snp | C/T | 0.452227 | 0.146984 | intron-variant | POC1A | GRCh38.p7 | 3:52114467 | ACAGGGGTCCACACA[C/T]GAGCATGCATGTGCA | 25886 |
rs6781635 | snp | A/G | 0.273587 | 0.248885 | intron-variant | POC1A | GRCh38.p7 | 3:52091327 | TCCCATAGGGGGCTC[A/G]AGGAACAAAAAGCCC | 25886 |
rs6782959 | snp | A/G | 0 | 0 | intron-variant | POC1A | GRCh38.p7 | 3:52086576 | AGCCTGTGTGCGTAC[A/G]CACGCAGGACCCTGA | 25886 |
rs6784563 | snp | C/G | 0.0225045 | 0.103662 | intron-variant | POC1A | GRCh38.p7 | 3:52141404 | TCCACAAAAGGACCG[C/G]TCATTTTCCCCAGGG | 25886 |
rs6784653 | snp | A/C | 0.046775 | 0.145601 | intron-variant | POC1A | GRCh38.p7 | 3:52141458 | ATGTTACTAGTGACA[A/C]GGTGGCTCTGGGTTG | 25886 |
rs6784764 | snp | C/T | 0.0588605 | 0.161139 | intron-variant | POC1A | GRCh38.p7 | 3:52141556 | CCTCTGTGTAAATGC[C/T]GTGTAAATGCTCACT | 25886 |
rs6784807 | snp | G/T | 0.123798 | 0.215808 | intron-variant | POC1A | GRCh38.p7 | 3:52129139 | ACAAAATTAGCCAGG[G/T]GCGGTGGCACACACC | 25886 |
rs6793051 | snp | A/G | 0.0023933 | 0.0345097 | intron-variant | POC1A | GRCh38.p7 | 3:52091539 | TTCAAGTGTCTATGT[A/G]CACCCCAGTGCCTCT | 25886 |
rs6797786 | snp | C/G | 0.0158424 | 0.0875798 | intron-variant | POC1A | GRCh38.p7 | 3:52138331 | ATCAGTCAGGTGCTG[C/G]CTAGGAGGCACAGGG | 25886 |
rs6803639 | snp | A/G | 0.0517044 | 0.152246 | intron-variant | POC1A | GRCh38.p7 | 3:52078176 | TCTGTGTTTGGTCTC[A/G]GCTTCCCCTGTTCCT | 25886 |
rs6809294 | snp | C/G | 0.183568 | 0.241012 | intron-variant | POC1A | GRCh38.p7 | 3:52136846 | TTCAAGTGTTTTCAG[C/G]CTAAGCGTGAGTTAG | 25886 |
rs7432429 | snp | A/C | | | utr-variant-3-prime, nc-transcript-variant | POC1A | GRCh38.p7 | 3:52075392 | GAGAGGGCTTGTTCT[A/C]AACAAACCTGACTCA | 25886 |
rs7618573 | snp | C/T | 0.269538 | 0.249235 | intron-variant | POC1A | GRCh38.p7 | 3:52082698 | GCCTTCTGAGCATGG[C/T]ATAAAAAGAACTGAT | 25886 |
rs7628987 | snp | C/T | 0.0298908 | 0.118541 | intron-variant | POC1A | GRCh38.p7 | 3:52131364 | TTCCCTTCTATAAAA[C/T]GAGGGGGTGAGATGG | 25886 |
rs7641984 | snp | C/T | 0.0023933 | 0.0345097 | intron-variant | POC1A | GRCh38.p7 | 3:52110089 | AAAGGAAAGACAGCC[C/T]GCCTCTAGCCTCACA | 25886 |
rs7649715 | snp | A/G | 0.000840038 | 0.0204771 | missense, synonymous-codon, nc-transcript-variant | POC1A | GRCh38.p7 | 3:52125150 | GCAAAATACTCCCCC[A/G]TTCTTGAAAAGGCAA | 25886 |
rs7652969 | snp | G/T | 0.0558544 | 0.157504 | intron-variant | POC1A | GRCh38.p7 | 3:52136864 | AAGCGTGAGTTAGCT[G/T]TTTAAAGAACACTCA | 25886 |
rs7652984 | snp | A/G | 0.046775 | 0.145601 | intron-variant | POC1A | GRCh38.p7 | 3:52136910 | ACTTGATAGGCATCT[A/G]TTTCAAACTGTTTCT | 25886 |
rs9809254 | snp | C/T | 0.286825 | 0.247273 | intron-variant | POC1A | GRCh38.p7 | 3:52077458 | CTGGCCCCTTCTAAA[C/T]GGGCCAATCAGGGCT | 25886 |
rs9809977 | snp | C/T | 0.236434 | 0.249632 | intron-variant | POC1A | GRCh38.p7 | 3:52132131 | AGACACATCCTCTCC[C/T]ACCATGAGGCAGACA | 25886 |
rs9811707 | snp | A/G | 0.236724 | 0.249647 | upstream-variant-2KB | POC1A | GRCh38.p7 | 3:52156641 | tgtacgatcaagccc[A/G]gcatggtggctcacg | 25886 |
rs9817653 | snp | G/T | 0.237303 | 0.249677 | intron-variant | POC1A | GRCh38.p7 | 3:52114217 | CTGCCTGAAAATCCT[G/T]TCCAGGAAAGACATG | 25886 |
rs9828327 | snp | C/T | 0.447421 | 0.153379 | intron-variant | POC1A | GRCh38.p7 | 3:52086193 | CCAGAGGTGGTGTGG[C/T]CCCCACTGCTCTGAG | 25886 |
rs9830293 | snp | A/G | 0.280785 | 0.248097 | intron-variant | POC1A | GRCh38.p7 | 3:52113469 | GCATTTTGGTAGGCC[A/G]AGGTGGGTGGATCAC | 25886 |
rs9841469 | snp | A/C | 0.236144 | 0.249616 | intron-variant | POC1A | GRCh38.p7 | 3:52132580 | CATCTGTCCACTCTC[A/C]TCTCAGGATGGGCAG | 25886 |
rs9843299 | snp | G/T | 0.177503 | 0.239258 | intron-variant | POC1A | GRCh38.p7 | 3:52103453 | atcgcttgaacgtgg[G/T]aggcagaggttgtag | 25886 |
rs9843852 | snp | C/G | 0.269809 | 0.249214 | intron-variant | POC1A | GRCh38.p7 | 3:52098013 | CTAAGGCAGTTCTGT[C/G]AGGAGACACAGCAGA | 25886 |
rs9846049 | snp | A/G | 0.283684 | 0.24772 | intron-variant | POC1A | GRCh38.p7 | 3:52086198 | GGTGGTGTGGTCCCC[A/G]CTGCTCTGAGTCTCA | 25886 |
rs9847073 | snp | A/G | 0.231482 | 0.249313 | intron-variant | POC1A | GRCh38.p7 | 3:52110931 | GAACTCTCGAAAGAG[A/G]TAACGAAGCTCTCAA | 25886 |
rs9857878 | snp | C/T | 0.191147 | 0.242974 | utr-variant-3-prime, downstream-variant-500B, nc-transcript-variant | POC1A | GRCh38.p7 | 3:52075652 | TGTGGTCCTCTCATT[C/T]GGGTCTGAAGCATCA | 25886 |
rs9868101 | snp | C/T | 0.237014 | 0.249662 | intron-variant | POC1A | GRCh38.p7 | 3:52104361 | AGCAAAAGAGAACAT[C/T]TTGGGATGATGGAAA | 25886 |
rs9874939 | snp | A/C | 0.423413 | 0.180077 | intron-variant | POC1A | GRCh38.p7 | 3:52109488 | TTTGTTTAATTAAAA[A/C]AAACAAACAAAAAAA | 25886 |
rs9882775 | snp | C/T | 0.174288 | 0.23826 | intron-variant | POC1A | GRCh38.p7 | 3:52115633 | TCATATGGGTGGAGC[C/T]ATCAGGTTTGGATTA | 25886 |
rs10577350 | in-del | -/AT | | | intron-variant | POC1A | GRCh38.p7 | 3:52120263 | GTGTTATATATATAT[-/AT]GTATCACAATAAAAC | 25886 |
rs10662992 | in-del | -/TTT | 0 | 0 | intron-variant | POC1A | GRCh38.p7 | 3:52119005 | AGGTTTTTTTTTTTT[-/TTT]GGTTGTTTACCATCA | 25886 |
rs11289961 | in-del | -/A | 0.000399281 | 0.0141238 | intron-variant | POC1A | GRCh38.p7 | 3:52101396 | CAAAAAGGCAGGGAG[-/A]AAAAAAAACCCCACT | 25886 |
rs11348693 | in-del | -/T | 0.370772 | 0.218893 | intron-variant | POC1A | GRCh38.p7 | 3:52127395 | CCGTTACTTTGAACC[-/T]TTTTTTTTTTTTTGA | 25886 |
rs11350232 | in-del | -/A | 0 | 0 | intron-variant | POC1A | GRCh38.p7 | 3:52106202 | AAAAAAAAAAAAAAA[-/A]GAAAGTTCAGAGACA | 25886 |
rs11546882 | snp | C/T | 0.00453097 | 0.047381 | POC1A | 3 | allele_origin=T(germline)/C(germline) | 3:52149942 | TCTGGCACATGAAGC[C/T]GCAGTCACGCGCCTA | 25886 |
rs11707129 | snp | C/G | 0.492918 | 0.0590819 | intron-variant | POC1A | GRCh38.p7 | 3:52082220 | AGTGGACCCACAAGG[C/G]CCCTGCAGGCTGGAG | 25886 |
rs11707276 | snp | C/T | 0.00385355 | 0.0437256 | intron-variant, utr-variant-3-prime | POC1A | GRCh38.p7 | 3:52122572 | GCCATGCCCAAAGTT[C/T]TGAGCCATGGTGGGA | 25886 |
rs11707714 | snp | G/T | | | intron-variant | POC1A | GRCh38.p7 | 3:52078714 | gacggggtttcaccg[G/T]ggtctcgatctcctg | 25886 |
rs11713915 | snp | A/T | | | intron-variant | POC1A | GRCh38.p7 | 3:52119570 | caactaatttttaaa[A/T]ttttttgtagagacg | 25886 |
rs11715265 | snp | A/C | 0 | 0 | intron-variant | POC1A | GRCh38.p7 | 3:52093301 | TCTCACACAGGGCCC[A/C]CCACACAGAGTGGGC | 25886 |
rs12386365 | snp | C/T | 0.287606 | 0.247155 | intron-variant | POC1A | GRCh38.p7 | 3:52127804 | GGGTTCAAGCGATTC[C/T]TGTGCCTCAGCCTCC | 25886 |
rs12486725 | snp | G/T | 0.000399281 | 0.0141238 | intron-variant, utr-variant-3-prime | POC1A | GRCh38.p7 | 3:52123012 | ATGGCCtccaggcca[G/T]aacactccttactga | 25886 |
rs12488456 | snp | C/T | 0.26818 | 0.249338 | intron-variant | POC1A | GRCh38.p7 | 3:52115802 | CAGCCTCCAGAACTG[C/T]GAGAAATAAAATTTC | 25886 |
rs12489539 | snp | C/T | 0.27008 | 0.249192 | intron-variant | POC1A | GRCh38.p7 | 3:52087281 | TCAGAGGGGAAGGAA[C/T]GGAGCTCCCCTCTCA | 25886 |
rs12493204 | snp | C/T | 0.267636 | 0.249377 | intron-variant | POC1A | GRCh38.p7 | 3:52091377 | TCCATTGTTAGGAAA[C/T]ACATGTTCCCTAAAA | 25886 |
rs12629791 | snp | C/T | 0.448452 | 0.152042 | intron-variant | POC1A | GRCh38.p7 | 3:52141767 | GCCGAGGTGGGAGGA[C/T]TGCTTGAGCTCAGGA | 25886 |
rs12635041 | snp | A/C | 0.375 | 0.216506 | intron-variant | POC1A | GRCh38.p7 | 3:52145070 | TCTCTGTTTTGCCAG[A/C]TACACAATTCCCAGT | 25886 |
rs12638916 | snp | A/G | 0 | 0 | intron-variant | POC1A | GRCh38.p7 | 3:52109714 | CAACGAGTACTCAGC[A/G]AATCCTGCAGCAATG | 25886 |
rs13064488 | snp | A/T | 0.0821376 | 0.185263 | intron-variant | POC1A | GRCh38.p7 | 3:52138321 | GGGGAAGGACATCAG[A/T]CAGGTGCTGGCTAGG | 25886 |
rs13071976 | snp | C/G | 0.336245 | 0.234652 | intron-variant | POC1A | GRCh38.p7 | 3:52105894 | GTAGGGAAGGTGCTA[C/G]GTCATTTTTGAAAGT | 25886 |
rs13081228 | snp | A/G | 0.335788 | 0.23482 | intron-variant | POC1A | GRCh38.p7 | 3:52125460 | GGACAGTCTGCACTG[A/G]CAGCCCTCCAGGGCT | 25886 |
rs13314125 | snp | C/T | 0.168785 | 0.236441 | intron-variant | POC1A | GRCh38.p7 | 3:52081382 | AAAGCACCTCCCCAA[C/T]GCTGGCCTGTGCCTG | 25886 |
rs17051963 | snp | A/C | 0.267908 | 0.249358 | intron-variant | POC1A | GRCh38.p7 | 3:52104884 | TTGGCAGTCAGGAGC[A/C]AGGTCTGCACACACC | 25886 |
rs17051977 | snp | C/T | 0.232067 | 0.249356 | intron-variant | POC1A | GRCh38.p7 | 3:52148928 | ATAATAAATGGCCCC[C/T]GTTGACCCAGTTTGT | 25886 |
rs28387060 | snp | C/T | 0.448836 | 0.15154 | intron-variant | POC1A | GRCh38.p7 | 3:52127627 | CTCGATCTCCTGACC[C/T]CATGATCTGCCCGTC | 25886 |
rs28452586 | snp | A/G | 0.286564 | 0.247312 | intron-variant | POC1A | GRCh38.p7 | 3:52141991 | CTCCCAGGGAGCCTG[A/G]AGAGTAAATGACTAG | 25886 |
rs34144705 | in-del | -/G | | | intron-variant | POC1A | GRCh38.p7 | 3:52083383 | CCTCACACCCCGTGG[-/G]AGTGACGTACAGTCC | 25886 |
rs34173982 | in-del | -/G | | | intron-variant | POC1A | GRCh38.p7 | 3:52147617 | TTATTTTATTTTATT[-/G]TTATTGTAGAGATGG | 25886 |
rs34281184 | in-del | -/T | | | intron-variant | POC1A | GRCh38.p7 | 3:52092727 | CCCAAAGTCTATTTT[-/T]CCCCATATAAATACA | 25886 |
rs34316233 | in-del | -/A | | | intron-variant | POC1A | GRCh38.p7 | 3:52130682 | AAACAGTCCTCCAAA[-/A]TGCCTAGACAGGAGC | 25886 |
rs34345207 | in-del | -/T | | | intron-variant | POC1A | GRCh38.p7 | 3:52104561 | TCACAGGACACAGTT[-/T]GACACCGTCCATCAC | 25886 |
rs34366194 | in-del | -/G | | | intron-variant | POC1A | GRCh38.p7 | 3:52093108 | CTAGTGTCCCGTCAG[-/G]TGAGGGTGAACTCCT | 25886 |
rs34413684 | in-del | -/T | | | upstream-variant-2KB | POC1A | GRCh38.p7 | 3:52155876 | TTATTTCAACCAATT[-/T]GCCAATCAGAATATG | 25886 |
rs34468659 | in-del | -/G | | | intron-variant | POC1A | GRCh38.p7 | 3:52141004 | TGGCAGATATCAGTG[-/G]ATGACACATACTGCC | 25886 |
rs34561595 | in-del | -/G | | | intron-variant | POC1A | GRCh38.p7 | 3:52147592 | CGTGCACCACCACAC[-/G]CCAGCTAATTTTATT | 25886 |
rs34610756 | in-del | -/G | | | intron-variant, utr-variant-3-prime | POC1A | GRCh38.p7 | 3:52122680 | CTCAAGAGGACCTGG[-/G]ATGTGACCAGGATGG | 25886 |
rs34758423 | in-del | -/T | | | intron-variant | POC1A | GRCh38.p7 | 3:52097655 | TATTAGGTAAGTATT[-/T]CTATTCTCATAGATC | 25886 |
rs34822002 | in-del | -/C | | | intron-variant | POC1A | GRCh38.p7 | 3:52085304 | GCACTCAGGTGCCCC[-/C]TCCGGCCTGCTCCTC | 25886 |
rs34858916 | in-del | -/C | | | intron-variant | POC1A | GRCh38.p7 | 3:52143902 | ATCCAAGGCCCTTCC[-/C]AAGGGGTACCTGCTG | 25886 |
rs34872653 | in-del | -/G | | | intron-variant | POC1A | GRCh38.p7 | 3:52077423 | CATTAGCTGCCATGG[-/G]AGGGTGCTCCGCCTG | 25886 |
rs34944945 | in-del | -/G | | | intron-variant | POC1A | GRCh38.p7 | 3:52141665 | ACACCCAGTACAGGG[-/G]TACAGGCCTGCCCTG | 25886 |
rs34951583 | in-del | -/C | | | intron-variant | POC1A | GRCh38.p7 | 3:52092847 | TGCTGTGCAAGTCCC[-/C]AAGGGCAGTTTGGTT | 25886 |