DNA & RNA Element - RepTar |
Gene Name | miRNA | Begin | End | Profile |
UBXD1 | hsa-miR-4257 | beg:75 | end:94 | pic:3' GAGTCAGG---GGTGGAGACC 5'& ||| |||||||||| &5' -----TCCAAGCCACCTCTGG 3' |
UBXD1 | hsa-miR-4292 | beg:61 | end:76 | pic:3' GGTTCCGGCCGGGTCCCC 5'& ||| ||||||| &5' -----GCCACCCCAGGG- 3' |
UBXD1 | hsa-miR-663 | beg:49 | end:67 | pic:3' CGCCAGGGCGCCGCGGGGCGGA 5'& ||.|| | ||||||| &5' ---GTTCCT---CTCCCCGCC- 3' |
UBXD1 | hsa-miR-525-5p | beg:80 | end:95 | pic:3' TCTTTCACGTAGGGAGACCTC 5'& || |||||||| &5' -------GCCA-CCTCTGGA- 3' |
UBXD1 | hsa-miR-520a-5p | beg:84 | end:95 | pic:3' TCTTTCATGAAGGGAGACCTC 5'& |||||||| &5' ------------CCTCTGGA- 3' |
UBXD1 | hsa-miR-486-3p | beg:96 | end:113 | pic:3' TAGGACATGACTCGACGGGGC 5'& |.|| .|| ||||||| &5' --CTTG-GCT---CTGCCCC- 3' |
UBXD1 | hsa-miR-2355 | beg:218 | end:228 | pic:3' AACAGGTAACATAGACCCCTA 5'& ||||||| &5' -------------CTGGGGA- 3' |
UBXD1 | hiv1-miR-H1 | beg:33 | end:53 | pic:3' CGGGTCCGTGCG-GAGGGACC 5'& |.|. ||.|| ||||||| &5' GTCT---CATGCTCTCCCTG- 3' |
UBXD1 | hsa-miR-101star | beg:13 | end:37 | pic:3' TCGTAGTCGTGACACTATTGAC 5'& .|| ||||| |||||. ||| &5' GGCCTCAGCCCTGTGGGT-CTG 3' |
UBXD1 | hsa-miR-1202 | beg:55 | end:77 | pic:3' GAGGG--GGTGACGTCGACCGTG 5'& ||||| |||| ||| ||| &5' CTCCCCGCCACCCCAG--GGC-- 3' |
UBXD1 | hsa-miR-1238 | beg:198 | end:217 | pic:3' CCCCGTCTGTCTGCTCCTTC 5'& || | |||||.|| &5' ----CAAGCCCCCGAGGGAG 3' |
UBXD1 | hsa-miR-1249 | beg:112 | end:131 | pic:3' ACTTCTTCCCC--CCCTTCCCGCA 5'& ||| ||||.||||| &5' -------GGGCACGGGAGGGGCG- 3' |
UBXD1 | hsa-miR-1268 | beg:55 | end:72 | pic:3' GGGGGTGGTGGTGCGGGC 5'& |.|| ||.|||| ||| &5' -CTCC-CCGCCAC-CCC- 3' |
UBXD1 | hsa-miR-1292 | beg:39 | end:58 | pic:3' GTCGCAGACGGCCTTGGGCAAGGGT 5'& |||. ||.|||||. &5' -------TGCTCTC-CCTGTTCCT- 3' |
UBXD1 | hsa-miR-1293 | beg:54 | end:71 | pic:3' CGTGTTTAGAGGTCTGGTGGGT 5'& ||||| .|||||| &5' -------TCTCCCCGCCACCC- 3' |
UBXD1 | hsa-miR-1306 | beg:63 | end:81 | pic:3' GTGGTGGTCTCGGTTGCA 5'& |||| ||||.||| | &5' CACC-CCAGGGCCTCC-- 3' |
UBXD1 | hsa-miR-1321 | beg:33 | end:53 | pic:3' TAGTGTAAGTGGAGGGAC 5'& .|| ||| .||||||| &5' GTCTCATGC-TCTCCCTG 3' |
UBXD1 | hsa-miR-132 | beg:131 | end:154 | pic:3' GCTGGTAC--CGACATC-TGACAAT 5'& .||.|| |||||.| |.|| &5' --GCCGTGGAGCTGTGGAATTG--- 3' |
UBXD1 | hsa-miR-139-5p | beg:131 | end:150 | pic:3' GACCTCTGTGCACG-TGACATCT 5'& .| |||| .||||.|| &5' ------GC-CGTGGAGCTGTGGA 3' |
UBXD1 | hsa-miR-1471 | beg:93 | end:119 | pic:3' TGTGGACCGAGGTGT-GCGCCCG 5'& |.||.|||||| | | .|||| &5' ATACTTGGCTCTGCCCCATGGGC 3' |
UBXD1 | hsa-miR-1825 | beg:207 | end:226 | pic:3' CCTCTCCTC-CCGTGACCT 5'& ||| |||| ||| ||||. &5' -GAG-GGAGAGGC-CTGGG 3' |
UBXD1 | hsa-miR-1908 | beg:46 | end:67 | pic:3' CTGGTTAGCGGCAGGGGCGGC 5'& || .|. |. |||||||| &5' --CCTGTTCCTCTCCCCGCC- 3' |
UBXD1 | hsa-miR-1914 | beg:105 | end:124 | pic:3' GTCTTCACCCGG----CCCGTGTCCC 5'& ||| ||||||.|| &5' ---------GCCCCATGGGCACGGG- 3' |
UBXD1 | hsa-miR-193bstar | beg:194 | end:209 | pic:3' AGTAGAGCGGGAGTTTTGGGGC 5'& ||||| ||.|||| &5' ------CGCCC---AAGCCCC- 3' |
UBXD1 | hsa-miR-19b-1star | beg:148 | end:168 | pic:3' CGACCTACGTTTGGA--CGTTTTGA 5'& .||| || || |||.|.| &5' -TTGG--GCC--CCGTGGCAGAGC- 3' |
UBXD1 | hsa-miR-19b-2star | beg:149 | end:168 | pic:3' ACTTTACGTTTGGA--CGTTTTGA 5'& || . || |||.|.| &5' -----TGGGCCCCGTGGCAGAGC- 3' |
UBXD1 | hsa-miR-220c | beg:11 | end:30 | pic:3' TCAGAAGTGTTGTCGGGACACA 5'& .||. .| |||||||||| &5' GGTTG--GCCTCAGCCCTGTG- 3' |
UBXD1 | hsa-miR-26a | beg:84 | end:104 | pic:3' TCGGATAGGACCTA-ATGAACTT 5'& ||| ||||| ||||||. &5' --CCT---CTGGAAATACTTGG- 3' |
UBXD1 | hsa-miR-26b | beg:83 | end:104 | pic:3' TGGATAGGACTTAATGAACTT 5'& ||| ||. ||| ||||||. &5' ACC--TCTGGAAATACTTGG- 3' |
UBXD1 | hsa-miR-3125 | beg:41 | end:60 | pic:3' AGAGAGGTGTCGAAGGAGAT 5'& |||||| | | ||||||| &5' -CTCTCC-CTG-TTCCTCT- 3' |
UBXD1 | hsa-miR-3126-5p | beg:39 | end:59 | pic:3' ACGAAGACCGTAGACAGGGAGT 5'& ||| ||| ||||.|||| &5' TGC-TCTCC---CTGTTCCTC- 3' |
UBXD1 | hsa-miR-3175 | beg:44 | end:64 | pic:3' TGCAGTGACGCAAGAGAGGGGC 5'& || |||. ||||||||| &5' ---TCCCTGTTC-CTCTCCCCG 3' |
UBXD1 | hsa-miR-3180-3p | beg:96 | end:114 | pic:3' CCGGAGGCCTTCGAGGCGGGGT 5'& ||. .||||.|||||| &5' ---CTT----GGCTCTGCCCCA 3' |
UBXD1 | hsa-miR-3180-5p | beg:79 | end:96 | pic:3' GCTGCACCCCGCCTCGC---AGACCTTC 5'& ||| ||||||| &5' -------------AGCCACCTCTGGAA- 3' |
UBXD1 | hsa-miR-3183 | beg:108 | end:130 | pic:3' AGGCTCGCTGAGGCTCTCTCCG 5'& || | |.| ||.|||.||| &5' -CCATG-GGCA-CGGGAGGGGC 3' |
UBXD1 | hsa-miR-3189 | beg:55 | end:76 | pic:3' GATGGGGTAGTCTGGGTTCCC 5'& || ||||. || ||||.|| &5' CT-CCCCGCCAC-CCCAGGG- 3' |
UBXD1 | hsa-miR-330-5p | beg:52 | end:74 | pic:3' CGGATTCT-GTGTCCGGGTCTCT 5'& ||| |.| |||||.| &5' -CCTCTCCCCGCCACCCCAGGG- 3' |
UBXD1 | hsa-miR-373 | beg:63 | end:91 | pic:3' TGTGGGGTTTT--AGCTTC-GTGAAG 5'& |||||||... || ||| ||| || &5' -CACCCCAGGGCCTCCAAGCCACCTC 3' |
UBXD1 | hsa-miR-4253 | beg:201 | end:223 | pic:3' TGGGGGA--CCTGTACGGGA 5'& .||||| ||| | |||. &5' GCCCCCGAGGGAGAGGCCT- 3' |
UBXD1 | hsa-miR-4268 | beg:108 | end:130 | pic:3' GTGTAGG-ACTC---TCCTCCTCGG 5'& || ||.| .|||||.|| &5' -----CCATGGGCACGGGAGGGGC- 3' |
UBXD1 | hsa-miR-4273 | beg:215 | end:231 | pic:3' GACAGGTAGTCTCTTGTG 5'& | || |.|.|||| &5' --GGCCT---GGGGACAC 3' |
UBXD1 | hsa-miR-4278 | beg:40 | end:53 | pic:3' GTTCCCGTTTGGGGGATC 5'& || |.||||. &5' -----GCT--CTCCCTG- 3' |
UBXD1 | hsa-miR-4287 | beg:201 | end:218 | pic:3' TTTCACGGGAGTTCCCTCT 5'& |||| |.||||||| &5' -----GCCCCCGAGGGAGA 3' |
UBXD1 | hsa-miR-4296 | beg:213 | end:231 | pic:3' ACT-CGGACTCGGGTGTA 5'& || |||||.| ||| &5' -GAGGCCTGGGGACAC-- 3' |
UBXD1 | hsa-miR-4303 | beg:31 | end:47 | pic:3' GACAGGAGT-CGAGTCTT 5'& |||| |||| |||| &5' CTGT-CTCATGCTC---- 3' |
UBXD1 | hsa-miR-4326 | beg:209 | end:230 | pic:3' CAGACCCTCTGTC--TCCTTGT 5'& |||||| . .||.||| &5' ----GGGAGAGGCCTGGGGACA 3' |
UBXD1 | hsa-miR-432star | beg:112 | end:135 | pic:3' TCTGTA-CCTCCTCGGTAGGTC 5'& .|.|| |||||.|| |||| &5' GGGCACGGGAGGGGCG--CCAG 3' |
UBXD1 | hsa-miR-513a-5p | beg:12 | end:33 | pic:3' TACTGT-GGAGGGACACTT 5'& ||.| | |||||||.. &5' -TGGCCTCAGCCCTGTGGG 3' |
UBXD1 | hsa-miR-548q | beg:125 | end:136 | pic:3' GGCGGTAATGAAAACGTGGTCG 5'& ||.||||| &5' --------------GCGCCAGC 3' |
UBXD1 | hsa-miR-608 | beg:47 | end:72 | pic:3' TGCCTCGACAGGGTT----GTGGTGGGGA 5'& ||||.|| |.||||||| &5' ------CTGTTCCTCTCCCCGCCACCCC- 3' |
UBXD1 | hsa-miR-615-5p | beg:59 | end:81 | pic:3' CTAGGCTCGTGGCC-CCTGGGGG 5'& ||| |||| ||.||.|| &5' ---CCGC-CACCCCAGGGCCTCC 3' |
UBXD1 | hsa-miR-623 | beg:195 | end:216 | pic:3' TGGGTTGTCGGGGACGTTCCCTA 5'& .|||| |||||| |.||||| &5' GCCCA--AGCCCC--CGAGGGA- 3' |
UBXD1 | hsa-miR-744 | beg:10 | end:30 | pic:3' ACGACAATCGGGATCGGGGCGT 5'& |||.||| |||||.|. &5' ----GTTGGCCTCAGCCCTGT- 3' |
UBXD1 | hsa-miR-760 | beg:56 | end:78 | pic:3' AGGGGTGTCTGGGTCTCGGC 5'& |||||.| |||||.||| &5' TCCCCGCCACCCCAGGGCC- 3' |
UBXD1 | hsa-miR-762 | beg:5 | end:28 | pic:3' CGAGCCGGGGCCGGGGTCGGGG 5'& || ||. .||||.||||||. &5' GCAGGGT--TGGCCTCAGCCCT 3' |
UBXD1 | hsa-miR-877 | beg:45 | end:66 | pic:3' GGGACGCGGTAGAGGAGATG 5'& |||||. || ||||| | | &5' CCCTGTTCC-TCTCC-CCGC 3' |
UBXD1 | hsv2-miR-H9-5p | beg:72 | end:94 | pic:3' TGGCGCTGAGGTGGAGGCTC 5'& .|| | | |||||||.|. &5' GCCTCCAAGCCACCTCTGG- 3' |
UBXD1 | kshv-miR-K12-10astar | beg:185 | end:207 | pic:3' TCACCACCATAGCGGGGTTCGG 5'& |||| || || |||||||| &5' -GTGG-GGATGCG-CCCAAGCC 3' |
UBXD1 | kshv-miR-K12-2star | beg:13 | end:35 | pic:3' GTCGAGA-TCGGGACCTTCTAG 5'& .|| || ||||||| .|.|| &5' -GGC-CTCAGCCCTGT-GGGTC 3' |
UBXD1 | sv40-miR-S1-5p | beg:40 | end:59 | pic:3' TTCCGAGTAAAGTCCGGGGAGT 5'& |||| |..|||| &5' ---GCTCTCCCT--GTTCCTC- 3' |