UBXN6
DNA & RNA Element - UTRdb
Gene NameTypeASPicDBUTRaspicRefseq IDGenome
UBXN63'UTR1c0afcfaecBA116537NM_025241chr19:4396261-4408693:-
UBXN63'UTR97f6139691BA116538NM_025241chr19:4395996-4408693:-
UBXN63'UTR48f77d49caBA116539NM_025241chr19:4396473-4408654:-
UBXN63'UTR875ac62a7cBA116540NM_025241chr19:4395996-4405013:-
UBXN63'UTRddea781b5cBA116541NM_025241chr19:4396473-4405052:-
UBXN63'UTRbc34343425BA116542NM_025241chr19:4395996-4408693:-
UBXN63'UTR0bdfe45bacBA116543NM_025241chr19:4397046-4408654:-
UBXN63'UTRa9c5c14a36BA116544NM_025241chr19:4397046-4405052:-
UBXN63'UTR4cec28b857BA116545NM_025241chr19:4397433-4408654:-
UBXN63'UTRcce1799603BA116546NM_025241chr19:4397433-4405052:-
UBXN63'UTRd4f2e7dfa6BA116547NM_025241chr19:4397497-4408693:-
UBXN63'UTRa89b154692NM_025241chr19:4398839-4408808:-
UBXN63'UTRdaaa447a96NM_025241chr19:4398839-4404960:-
UBXN63'UTRd378a0aeb8NM_025241chr19:4398839-4406294:-
UBXN65'UTR1c0afcfaecCA182973NM_025241chr19:4396496-4408790:-
UBXN65'UTR97f6139691CA182974NM_025241chr19:4396496-4408809:-
UBXN65'UTR48f77d49caCA182975NM_025241chr19:4396616-4408809:-
UBXN65'UTR875ac62a7cCA182976NM_025241chr19:4396496-4406295:-
UBXN65'UTRddea781b5cCA182977NM_025241chr19:4396505-4406295:-
UBXN65'UTRbc34343425CA182978NM_025241chr19:4396475-4408809:-
UBXN65'UTR0bdfe45bacCA182979NM_025241chr19:4397234-4408809:-
UBXN65'UTRa9c5c14a36CA182980NM_025241chr19:4397282-4406295:-
UBXN65'UTR4cec28b857CA182981NM_025241chr19:4397608-4408809:-
UBXN65'UTRcce1799603CA182982NM_025241chr19:4397662-4406295:-
UBXN65'UTRd4f2e7dfa6CA182983NM_025241chr19:4398620-4408809:-
DNA & RNA Element - circBase
circRNA IDChromStartEndStrand
hsa_circ_0048617chr1944450024447622-
hsa_circ_0048620chr1944450024454090-
hsa_circ_0048624chr1944523604455295-
hsa_circ_0048618chr1944450024448412-
hsa_circ_0048622chr1944468324454090-
hsa_circ_0048621chr1944450024455295-
hsa_circ_0048625chr1944534544454090-
hsa_circ_0048615chr1944450024445620-
hsa_circ_0048623chr1944523604454090-
hsa_circ_0048619chr1944450024452489-
hsa_circ_0048616chr1944450024446410-
DNA & RNA Element - circRNADb
circRNA IDChromStartEndStrandSamples
hsa_circ_32635chr1944455364447603-cd_19
DNA & RNA Element - CircNet
Circ IDGITPositionExpressSymbolEntrezCategoryStrandRefered Name
hsa-circ-UBXN6-antisense.1NM_001171091Tchr19:4445536-4447603expressedUBXN680700protein-coding+hsa_circ_0000877
hsa-circ-UBXN6-antisense.2NM_025241Tchr19:4445524-4446156expressedUBXN680700protein-coding+not_available
hsa-circ-UBXN6-antisense.3NM_001171091Tchr19:4452896-4453491expressedUBXN680700protein-coding+not_available
hsa-circ-UBXN6-antisense.6NM_025241Tchr19:4445407-4452409noneUBXN680700protein-coding+not_available
hsa-circ-UBXN6-overlap.3NM_025241Tchr19:4446832-4457676expressedUBXN680700protein-codingxnot_available
hsa-circ-UBXN6-overlap.5NM_001171091Tchr19:4447322-4447665expressedUBXN680700protein-coding-not_available
hsa-circ-UBXN6.13NM_001171091Tchr19:4445002-4455295expressedUBXN680700protein-coding-hsa_circ_0048621
hsa-circ-UBXN6.15NM_001171091Tchr19:4445002-4445620expressedUBXN680700protein-coding-hsa_circ_0048615
hsa-circ-UBXN6.17NM_025241Tchr19:4453454-4454090expressedUBXN680700protein-coding-hsa_circ_0048625
hsa-circ-UBXN6.18NM_001171091Tchr19:4446832-4447622noneUBXN680700protein-coding-not_available
hsa-circ-UBXN6.20NM_001171091Tchr19:4445002-4454090expressedUBXN680700protein-coding-hsa_circ_0048620
hsa-circ-UBXN6.21NM_025241Tchr19:4445002-4447622expressedUBXN680700protein-coding-hsa_circ_0048617
hsa-circ-UBXN6.22NM_001171091Tchr19:4446496-4454090noneUBXN680700protein-coding-not_available
hsa-circ-UBXN6.24NM_001171091Tchr19:4445002-4448412noneUBXN680700protein-coding-hsa_circ_0048618
hsa-circ-UBXN6.3NM_025241Tchr19:4445002-4446410noneUBXN680700protein-coding-hsa_circ_0048616
hsa-circ-UBXN6.5NM_025241Tchr19:4445002-4452489expressedUBXN680700protein-coding-hsa_circ_0048619
hsa-circ-UBXN6.6NM_025241Tchr19:4452360-4454090expressedUBXN680700protein-coding-hsa_circ_0048623
hsa-circ-UBXN6.7NM_001171091Tchr19:4452360-4455295expressedUBXN680700protein-coding-hsa_circ_0048624
hsa-circ-UBXN6.8NM_025241Tchr19:4446832-4454090noneUBXN680700protein-coding-hsa_circ_0048622
DNA & RNA Element - miRTarBase
Target Gene (Entrez ID)miRTarBase IDmiRNASpecies (miRNA)Target GeneSpecies (Target Gene)ExperimentsSupport TypeReferences (PMID)
MIRT040969hsa-miR-18a-3pHomo sapiensUBXN680700Homo sapiensCLASHFunctional MTI (Weak)23622248
MIRT045110hsa-miR-186-5pHomo sapiensUBXN680700Homo sapiensCLASHFunctional MTI (Weak)23622248
DNA & RNA Element - microRNA
Mirbase AccmiRNA NameGene IDGene SymbolmiRNA AlignmentAlignmentGene AlignmentmiRNA StartmiRNA EndGene StartGene EndGenome CoordinatesConservationAlign ScoreSeed CatEnergymirSVR Score
MIMAT0004762hsa-miR-486-3p80700UBXN6uaggacAUGACUC--GACGGGGc |||| :| ||||||| uggaaaUACUUGGCUCUGCCCCa21691113[hg19:19:4445382-4445404:-]0.46491507-19.93-0.2217
MIMAT0002833hsa-miR-520a-5p80700UBXN6ucuuucaugaagGGAGACCUc |||||||| gccuccaagccaCCUCUGGAa2107595[hg19:19:4445400-4445420:-]0.45911457-15.24-0.1842
MIMAT0002838hsa-miR-525-5p80700UBXN6ucuuucacguagGGAGACCUc |||||||| gccuccaagccaCCUCUGGAa2107595[hg19:19:4445400-4445420:-]0.45911457-16.82-0.1824
MIMAT0003326hsa-miR-66380700UBXN6cgccaGGGC--GCCGCGGGGCGGa ||:| | | ||||||| cucucCCUGUUCCUCUCCCCGCCa2184467[hg19:19:4445428-4445451:-]0.42061447-22.47-0.4707
MIMAT0007881hsa-miR-190880700UBXN6cuGGUUAGCGGCAGGGGCGGc || :|: |: |||||||| ucCCUGUUCCUCUCCCCGCCa2204767[hg19:19:4445428-4445448:-]0.42061597-23.01-0.4740
MIMAT0015034hsa-miR-316080700UBXN6acccgaaAGAUCAGAGU-CGAGa ||| |||||| |||| cugugggUCU-GUCUCAUGCUCu2162647[hg19:19:4445448-4445469:-]0.46791250-25.18-0.1080
MIMAT0015057hsa-miR-3180-5p80700UBXN6gcugcaccccgccucGCAGACCUUc | ||||||| agggccuccaagccaCCUCUGGAAa2117296[hg19:19:4445399-4445423:-]0.45911427-16.68-0.1624
MIMAT0016878hsa-miR-425780700UBXN6gagucaggGGUGGAGACc ||||||||| ccuccaagCCACCUCUGg2117693[hg19:19:4445402-4445419:-]0.48911507-24.44-0.1150
MIMAT0016900hsa-miR-427080700UBXN6cgggAGGGGAC-UGAGGGACu ||:| || ||||||| ucugUCUCAUGCUCUCCCUGu2173353[hg19:19:4445442-4445462:-]0.42061517-22.78-0.2491
DNA & RNA Element - TRANSFAC
AccessionASDescriptionSpeciesEntrezPubmedBinding Info
G048938UBXN6Homo sapiens80700
DNA & RNA Element - TargetScan
Gene NameUTR Region StartUTR Region EndAIRTotal Normalized 3P-seq-tags & PseudocountsStrandhg19_chromosomeGenome StartGenome End
UBXN6; UBXD1; UBXDC21221001881.076-chr1944454724445494
UBXN6; UBXD1; UBXDC2233886.1061881.076-chr1944454564445472
UBXN6; UBXD1; UBXDC2393985.7991881.076-chr1944454554445456
UBXN6; UBXD1; UBXDC24046978.7241881.076-chr1944450254445455
UBXN6; UBXD1; UBXDC247048778.6051881.076-chr1944450074445025
UBXN6; UBXD1; UBXDC24884920.2661881.076-chr1944450024445007
UBXN6; UBXD1; UBXDC24934990.011881.076-chr1944449954445002
DNA & RNA Element - RepTar
Gene NamemiRNABeginEndProfile
UBXD1hsa-miR-4257beg:75end:94pic:3' GAGTCAGG---GGTGGAGACC 5'& ||| |||||||||| &5' -----TCCAAGCCACCTCTGG 3'
UBXD1hsa-miR-4292beg:61end:76pic:3' GGTTCCGGCCGGGTCCCC 5'& ||| ||||||| &5' -----GCCACCCCAGGG- 3'
UBXD1hsa-miR-663beg:49end:67pic:3' CGCCAGGGCGCCGCGGGGCGGA 5'& ||.|| | ||||||| &5' ---GTTCCT---CTCCCCGCC- 3'
UBXD1hsa-miR-525-5pbeg:80end:95pic:3' TCTTTCACGTAGGGAGACCTC 5'& || |||||||| &5' -------GCCA-CCTCTGGA- 3'
UBXD1hsa-miR-520a-5pbeg:84end:95pic:3' TCTTTCATGAAGGGAGACCTC 5'& |||||||| &5' ------------CCTCTGGA- 3'
UBXD1hsa-miR-486-3pbeg:96end:113pic:3' TAGGACATGACTCGACGGGGC 5'& |.|| .|| ||||||| &5' --CTTG-GCT---CTGCCCC- 3'
UBXD1hsa-miR-2355beg:218end:228pic:3' AACAGGTAACATAGACCCCTA 5'& ||||||| &5' -------------CTGGGGA- 3'
UBXD1hiv1-miR-H1beg:33end:53pic:3' CGGGTCCGTGCG-GAGGGACC 5'& |.|. ||.|| ||||||| &5' GTCT---CATGCTCTCCCTG- 3'
UBXD1hsa-miR-101starbeg:13end:37pic:3' TCGTAGTCGTGACACTATTGAC 5'& .|| ||||| |||||. ||| &5' GGCCTCAGCCCTGTGGGT-CTG 3'
UBXD1hsa-miR-1202beg:55end:77pic:3' GAGGG--GGTGACGTCGACCGTG 5'& ||||| |||| ||| ||| &5' CTCCCCGCCACCCCAG--GGC-- 3'
UBXD1hsa-miR-1238beg:198end:217pic:3' CCCCGTCTGTCTGCTCCTTC 5'& || | |||||.|| &5' ----CAAGCCCCCGAGGGAG 3'
UBXD1hsa-miR-1249beg:112end:131pic:3' ACTTCTTCCCC--CCCTTCCCGCA 5'& ||| ||||.||||| &5' -------GGGCACGGGAGGGGCG- 3'
UBXD1hsa-miR-1268beg:55end:72pic:3' GGGGGTGGTGGTGCGGGC 5'& |.|| ||.|||| ||| &5' -CTCC-CCGCCAC-CCC- 3'
UBXD1hsa-miR-1292beg:39end:58pic:3' GTCGCAGACGGCCTTGGGCAAGGGT 5'& |||. ||.|||||. &5' -------TGCTCTC-CCTGTTCCT- 3'
UBXD1hsa-miR-1293beg:54end:71pic:3' CGTGTTTAGAGGTCTGGTGGGT 5'& ||||| .|||||| &5' -------TCTCCCCGCCACCC- 3'
UBXD1hsa-miR-1306beg:63end:81pic:3' GTGGTGGTCTCGGTTGCA 5'& |||| ||||.||| | &5' CACC-CCAGGGCCTCC-- 3'
UBXD1hsa-miR-1321beg:33end:53pic:3' TAGTGTAAGTGGAGGGAC 5'& .|| ||| .||||||| &5' GTCTCATGC-TCTCCCTG 3'
UBXD1hsa-miR-132beg:131end:154pic:3' GCTGGTAC--CGACATC-TGACAAT 5'& .||.|| |||||.| |.|| &5' --GCCGTGGAGCTGTGGAATTG--- 3'
UBXD1hsa-miR-139-5pbeg:131end:150pic:3' GACCTCTGTGCACG-TGACATCT 5'& .| |||| .||||.|| &5' ------GC-CGTGGAGCTGTGGA 3'
UBXD1hsa-miR-1471beg:93end:119pic:3' TGTGGACCGAGGTGT-GCGCCCG 5'& |.||.|||||| | | .|||| &5' ATACTTGGCTCTGCCCCATGGGC 3'
UBXD1hsa-miR-1825beg:207end:226pic:3' CCTCTCCTC-CCGTGACCT 5'& ||| |||| ||| ||||. &5' -GAG-GGAGAGGC-CTGGG 3'
UBXD1hsa-miR-1908beg:46end:67pic:3' CTGGTTAGCGGCAGGGGCGGC 5'& || .|. |. |||||||| &5' --CCTGTTCCTCTCCCCGCC- 3'
UBXD1hsa-miR-1914beg:105end:124pic:3' GTCTTCACCCGG----CCCGTGTCCC 5'& ||| ||||||.|| &5' ---------GCCCCATGGGCACGGG- 3'
UBXD1hsa-miR-193bstarbeg:194end:209pic:3' AGTAGAGCGGGAGTTTTGGGGC 5'& ||||| ||.|||| &5' ------CGCCC---AAGCCCC- 3'
UBXD1hsa-miR-19b-1starbeg:148end:168pic:3' CGACCTACGTTTGGA--CGTTTTGA 5'& .||| || || |||.|.| &5' -TTGG--GCC--CCGTGGCAGAGC- 3'
UBXD1hsa-miR-19b-2starbeg:149end:168pic:3' ACTTTACGTTTGGA--CGTTTTGA 5'& || . || |||.|.| &5' -----TGGGCCCCGTGGCAGAGC- 3'
UBXD1hsa-miR-220cbeg:11end:30pic:3' TCAGAAGTGTTGTCGGGACACA 5'& .||. .| |||||||||| &5' GGTTG--GCCTCAGCCCTGTG- 3'
UBXD1hsa-miR-26abeg:84end:104pic:3' TCGGATAGGACCTA-ATGAACTT 5'& ||| ||||| ||||||. &5' --CCT---CTGGAAATACTTGG- 3'
UBXD1hsa-miR-26bbeg:83end:104pic:3' TGGATAGGACTTAATGAACTT 5'& ||| ||. ||| ||||||. &5' ACC--TCTGGAAATACTTGG- 3'
UBXD1hsa-miR-3125beg:41end:60pic:3' AGAGAGGTGTCGAAGGAGAT 5'& |||||| | | ||||||| &5' -CTCTCC-CTG-TTCCTCT- 3'
UBXD1hsa-miR-3126-5pbeg:39end:59pic:3' ACGAAGACCGTAGACAGGGAGT 5'& ||| ||| ||||.|||| &5' TGC-TCTCC---CTGTTCCTC- 3'
UBXD1hsa-miR-3175beg:44end:64pic:3' TGCAGTGACGCAAGAGAGGGGC 5'& || |||. ||||||||| &5' ---TCCCTGTTC-CTCTCCCCG 3'
UBXD1hsa-miR-3180-3pbeg:96end:114pic:3' CCGGAGGCCTTCGAGGCGGGGT 5'& ||. .||||.|||||| &5' ---CTT----GGCTCTGCCCCA 3'
UBXD1hsa-miR-3180-5pbeg:79end:96pic:3' GCTGCACCCCGCCTCGC---AGACCTTC 5'& ||| ||||||| &5' -------------AGCCACCTCTGGAA- 3'
UBXD1hsa-miR-3183beg:108end:130pic:3' AGGCTCGCTGAGGCTCTCTCCG 5'& || | |.| ||.|||.||| &5' -CCATG-GGCA-CGGGAGGGGC 3'
UBXD1hsa-miR-3189beg:55end:76pic:3' GATGGGGTAGTCTGGGTTCCC 5'& || ||||. || ||||.|| &5' CT-CCCCGCCAC-CCCAGGG- 3'
UBXD1hsa-miR-330-5pbeg:52end:74pic:3' CGGATTCT-GTGTCCGGGTCTCT 5'& ||| |.| |||||.| &5' -CCTCTCCCCGCCACCCCAGGG- 3'
UBXD1hsa-miR-373beg:63end:91pic:3' TGTGGGGTTTT--AGCTTC-GTGAAG 5'& |||||||... || ||| ||| || &5' -CACCCCAGGGCCTCCAAGCCACCTC 3'
UBXD1hsa-miR-4253beg:201end:223pic:3' TGGGGGA--CCTGTACGGGA 5'& .||||| ||| | |||. &5' GCCCCCGAGGGAGAGGCCT- 3'
UBXD1hsa-miR-4268beg:108end:130pic:3' GTGTAGG-ACTC---TCCTCCTCGG 5'& || ||.| .|||||.|| &5' -----CCATGGGCACGGGAGGGGC- 3'
UBXD1hsa-miR-4273beg:215end:231pic:3' GACAGGTAGTCTCTTGTG 5'& | || |.|.|||| &5' --GGCCT---GGGGACAC 3'
UBXD1hsa-miR-4278beg:40end:53pic:3' GTTCCCGTTTGGGGGATC 5'& || |.||||. &5' -----GCT--CTCCCTG- 3'
UBXD1hsa-miR-4287beg:201end:218pic:3' TTTCACGGGAGTTCCCTCT 5'& |||| |.||||||| &5' -----GCCCCCGAGGGAGA 3'
UBXD1hsa-miR-4296beg:213end:231pic:3' ACT-CGGACTCGGGTGTA 5'& || |||||.| ||| &5' -GAGGCCTGGGGACAC-- 3'
UBXD1hsa-miR-4303beg:31end:47pic:3' GACAGGAGT-CGAGTCTT 5'& |||| |||| |||| &5' CTGT-CTCATGCTC---- 3'
UBXD1hsa-miR-4326beg:209end:230pic:3' CAGACCCTCTGTC--TCCTTGT 5'& |||||| . .||.||| &5' ----GGGAGAGGCCTGGGGACA 3'
UBXD1hsa-miR-432starbeg:112end:135pic:3' TCTGTA-CCTCCTCGGTAGGTC 5'& .|.|| |||||.|| |||| &5' GGGCACGGGAGGGGCG--CCAG 3'
UBXD1hsa-miR-513a-5pbeg:12end:33pic:3' TACTGT-GGAGGGACACTT 5'& ||.| | |||||||.. &5' -TGGCCTCAGCCCTGTGGG 3'
UBXD1hsa-miR-548qbeg:125end:136pic:3' GGCGGTAATGAAAACGTGGTCG 5'& ||.||||| &5' --------------GCGCCAGC 3'
UBXD1hsa-miR-608beg:47end:72pic:3' TGCCTCGACAGGGTT----GTGGTGGGGA 5'& ||||.|| |.||||||| &5' ------CTGTTCCTCTCCCCGCCACCCC- 3'
UBXD1hsa-miR-615-5pbeg:59end:81pic:3' CTAGGCTCGTGGCC-CCTGGGGG 5'& ||| |||| ||.||.|| &5' ---CCGC-CACCCCAGGGCCTCC 3'
UBXD1hsa-miR-623beg:195end:216pic:3' TGGGTTGTCGGGGACGTTCCCTA 5'& .|||| |||||| |.||||| &5' GCCCA--AGCCCC--CGAGGGA- 3'
UBXD1hsa-miR-744beg:10end:30pic:3' ACGACAATCGGGATCGGGGCGT 5'& |||.||| |||||.|. &5' ----GTTGGCCTCAGCCCTGT- 3'
UBXD1hsa-miR-760beg:56end:78pic:3' AGGGGTGTCTGGGTCTCGGC 5'& |||||.| |||||.||| &5' TCCCCGCCACCCCAGGGCC- 3'
UBXD1hsa-miR-762beg:5end:28pic:3' CGAGCCGGGGCCGGGGTCGGGG 5'& || ||. .||||.||||||. &5' GCAGGGT--TGGCCTCAGCCCT 3'
UBXD1hsa-miR-877beg:45end:66pic:3' GGGACGCGGTAGAGGAGATG 5'& |||||. || ||||| | | &5' CCCTGTTCC-TCTCC-CCGC 3'
UBXD1hsv2-miR-H9-5pbeg:72end:94pic:3' TGGCGCTGAGGTGGAGGCTC 5'& .|| | | |||||||.|. &5' GCCTCCAAGCCACCTCTGG- 3'
UBXD1kshv-miR-K12-10astarbeg:185end:207pic:3' TCACCACCATAGCGGGGTTCGG 5'& |||| || || |||||||| &5' -GTGG-GGATGCG-CCCAAGCC 3'
UBXD1kshv-miR-K12-2starbeg:13end:35pic:3' GTCGAGA-TCGGGACCTTCTAG 5'& .|| || ||||||| .|.|| &5' -GGC-CTCAGCCCTGT-GGGTC 3'
UBXD1sv40-miR-S1-5pbeg:40end:59pic:3' TTCCGAGTAAAGTCCGGGGAGT 5'& |||| |..|||| &5' ---GCTCTCCCT--GTTCCTC- 3'
DNA & RNA Element - SomamiR
Gene NameMutationMutation IDmiR IDChromosomeLocationRefAltmirsitemirseedSeed ClassSample NameCancer Type
UBXN6chr19:g.4457718G>CCOSN2525780hsa-miR-1908-5pchr194457718GCgccCCCCGCCGccggCGGCGGGGm8a
UBXN6chr19:g.4457718G>CCOSN2525780hsa-miR-328-5pchr194457718GCGCCCCCCCccgccggGGGGGGGCm8a
UBXN6chr19:g.4457718G>CCOSN2525780hsa-miR-3656chr194457718GCgcccCCCGCCgccggGGCGGGUGm6a
UBXN6chr19:g.4457718G>CCOSN2525780hsa-miR-3960chr194457718GCgccccCCGCCGCCggGGCGGCGGm8a
UBXN6chr19:g.4457718G>CCOSN2525780hsa-miR-4285chr194457718GCgcccccCGCCGCcggGCGGCGAGm6a
UBXN6chr19:g.4457718G>CCOSN2525780hsa-miR-4467chr194457718GCgcccccCGCCGCCggUGGCGGCGm7b
UBXN6chr19:g.4457718G>CCOSN2525780hsa-miR-4508chr194457718GCgccCCCCGCcgccggGCGGGGCUm6a
UBXN6chr19:g.4457718G>CCOSN2525780hsa-miR-4525chr194457718GCgcccCCCCCCgccggGGGGGGAUm6a
UBXN6chr19:g.4457718G>CCOSN2525780hsa-miR-4706chr194457718GCgccCCCCGCcgccggAGCGGGGAm6b
UBXN6chr19:g.4457718G>CCOSN2525780hsa-miR-4749-5pchr194457718GCgccCCCCGCcgccggUGCGGGGAm6b
UBXN6chr19:g.4457718G>CCOSN2525780hsa-miR-4781-5pchr194457718GCgccCCCCGCcgccggUAGCGGGGm6c
UBXN6chr19:g.4457718G>CCOSN2525780hsa-miR-4787-5pchr194457718GCgcCCCCCGCcgccggGCGGGGGUm7a
UBXN6chr19:g.4457718G>CCOSN2525780hsa-miR-663achr194457718GCgccCCCCGCCgccggAGGCGGGGm7b
UBXN6chr19:g.4457718G>CCOSN2525780hsa-miR-6752-5pchr194457718GCgcccCCCCCCgccggGGGGGGUGm6a
UBXN6chr19:g.4457718G>CCOSN2525780hsa-miR-6770-3pchr194457718GCgccccccGCCGCCggCUGGCGGCm6c
UBXN6chr19:g.4457718G>CCOSN2525780hsa-miR-6787-5pchr194457718GCgccCCCCGCCgccggUGGCGGGGm7b
UBXN6chr19:g.4457718G>CCOSN2525780hsa-miR-6795-5pchr194457718GCgcccCCCCCCgccggUGGGGGGAm6b
UBXN6chr19:g.4457718G>CCOSN2525780hsa-miR-6885-5pchr194457718GCgcccCCCCCCgccggAGGGGGGCm6b
UBXN6chr19:g.4457718G>CCOSN2525780hsa-miR-6887-5pchr194457718GCgcccCCCCCCgccggUGGGGGGAm6b
UBXN6chr19:g.4457718G>CCOSN2525780hsa-miR-7109-5pchr194457718GCgcccCCCCCCgccggCUGGGGGGm6c
UBXN6chr19:g.4457718G>CCOSN2525780hsa-miR-744-5pchr194457718GCgccCCCCGCcgccggUGCGGGGCm6b
UBXN6chr19:g.4457718G>CCOSN2525780hsa-miR-8072chr194457718GCgccccCCGCCGCCggGGCGGCGGm8a
UBXN6chr19:g.4457718G>CCOSN2525780hsa-miR-1237-5pchr194457718GCgcCCCCCGccgccggCGGGGGCGm6a
UBXN6chr19:g.4457718G>CCOSN2525780hsa-miR-1908-5pchr194457718GCgccCCCCGCCGccggCGGCGGGGm8a
UBXN6chr19:g.4457718G>CCOSN2525780hsa-miR-328-5pchr194457718GCGCCCCCCCccgccggGGGGGGGCm8a
UBXN6chr19:g.4457718G>CCOSN2525780hsa-miR-3656chr194457718GCgcccCCCGCCgccggGGCGGGUGm6a
UBXN6chr19:g.4457718G>CCOSN2525780hsa-miR-3960chr194457718GCgccccCCGCCGCCggGGCGGCGGm8a
UBXN6chr19:g.4457718G>CCOSN2525780hsa-miR-4285chr194457718GCgcccccCGCCGCcggGCGGCGAGm6a
UBXN6chr19:g.4457718G>CCOSN2525780hsa-miR-4467chr194457718GCgcccccCGCCGCCggUGGCGGCGm7b
UBXN6chr19:g.4457718G>CCOSN2525780hsa-miR-4508chr194457718GCgccCCCCGCcgccggGCGGGGCUm6a
UBXN6chr19:g.4457718G>CCOSN2525780hsa-miR-4525chr194457718GCgcccCCCCCCgccggGGGGGGAUm6a
UBXN6chr19:g.4457718G>CCOSN2525780hsa-miR-4706chr194457718GCgccCCCCGCcgccggAGCGGGGAm6b
UBXN6chr19:g.4457718G>CCOSN2525780hsa-miR-4749-5pchr194457718GCgccCCCCGCcgccggUGCGGGGAm6b
UBXN6chr19:g.4457718G>CCOSN2525780hsa-miR-4781-5pchr194457718GCgccCCCCGCcgccggUAGCGGGGm6c
UBXN6chr19:g.4457718G>CCOSN2525780hsa-miR-4787-5pchr194457718GCgcCCCCCGCcgccggGCGGGGGUm7a
UBXN6chr19:g.4457718G>CCOSN2525780hsa-miR-663achr194457718GCgccCCCCGCCgccggAGGCGGGGm7b
UBXN6chr19:g.4457718G>CCOSN2525780hsa-miR-6752-5pchr194457718GCgcccCCCCCCgccggGGGGGGUGm6a
UBXN6chr19:g.4457718G>CCOSN2525780hsa-miR-6770-3pchr194457718GCgccccccGCCGCCggCUGGCGGCm6c
UBXN6chr19:g.4457718G>CCOSN2525780hsa-miR-6787-5pchr194457718GCgccCCCCGCCgccggUGGCGGGGm7b
UBXN6chr19:g.4457718G>CCOSN2525780hsa-miR-6795-5pchr194457718GCgcccCCCCCCgccggUGGGGGGAm6b
UBXN6chr19:g.4457718G>CCOSN2525780hsa-miR-6885-5pchr194457718GCgcccCCCCCCgccggAGGGGGGCm6b
UBXN6chr19:g.4457718G>CCOSN2525780hsa-miR-6887-5pchr194457718GCgcccCCCCCCgccggUGGGGGGAm6b
UBXN6chr19:g.4457718G>CCOSN2525780hsa-miR-7109-5pchr194457718GCgcccCCCCCCgccggCUGGGGGGm6c
UBXN6chr19:g.4457718G>CCOSN2525780hsa-miR-744-5pchr194457718GCgccCCCCGCcgccggUGCGGGGCm6b
UBXN6chr19:g.4457718G>CCOSN2525780hsa-miR-8072chr194457718GCgccccCCGCCGCCggGGCGGCGGm8a
UBXN6chr19:g.4457718G>CCOSN2525693hsa-miR-1237-5pchr194457718GCgcCCCCCGccgccggCGGGGGCGm6a
UBXN6chr19:g.4457718G>CCOSN2525693hsa-miR-1908-5pchr194457718GCgccCCCCGCCGccggCGGCGGGGm8a
UBXN6chr19:g.4457718G>CCOSN2525693hsa-miR-328-5pchr194457718GCGCCCCCCCccgccggGGGGGGGCm8a
UBXN6chr19:g.4457718G>CCOSN2525693hsa-miR-3656chr194457718GCgcccCCCGCCgccggGGCGGGUGm6a
UBXN6chr19:g.4457718G>CCOSN2525693hsa-miR-3960chr194457718GCgccccCCGCCGCCggGGCGGCGGm8a
UBXN6chr19:g.4457718G>CCOSN2525693hsa-miR-4285chr194457718GCgcccccCGCCGCcggGCGGCGAGm6a
UBXN6chr19:g.4457718G>CCOSN2525693hsa-miR-4467chr194457718GCgcccccCGCCGCCggUGGCGGCGm7b
UBXN6chr19:g.4457718G>CCOSN2525693hsa-miR-4508chr194457718GCgccCCCCGCcgccggGCGGGGCUm6a
UBXN6chr19:g.4457718G>CCOSN2525693hsa-miR-4525chr194457718GCgcccCCCCCCgccggGGGGGGAUm6a
UBXN6chr19:g.4457718G>CCOSN2525693hsa-miR-4706chr194457718GCgccCCCCGCcgccggAGCGGGGAm6b
UBXN6chr19:g.4457718G>CCOSN2525693hsa-miR-4749-5pchr194457718GCgccCCCCGCcgccggUGCGGGGAm6b
UBXN6chr19:g.4457718G>CCOSN2525693hsa-miR-4781-5pchr194457718GCgccCCCCGCcgccggUAGCGGGGm6c
UBXN6chr19:g.4457718G>CCOSN2525693hsa-miR-4787-5pchr194457718GCgcCCCCCGCcgccggGCGGGGGUm7a
UBXN6chr19:g.4457718G>CCOSN2525693hsa-miR-663achr194457718GCgccCCCCGCCgccggAGGCGGGGm7b
UBXN6chr19:g.4457718G>CCOSN2525693hsa-miR-6752-5pchr194457718GCgcccCCCCCCgccggGGGGGGUGm6a
UBXN6chr19:g.4457718G>CCOSN2525693hsa-miR-6770-3pchr194457718GCgccccccGCCGCCggCUGGCGGCm6c
UBXN6chr19:g.4457718G>CCOSN2525693hsa-miR-6787-5pchr194457718GCgccCCCCGCCgccggUGGCGGGGm7b
UBXN6chr19:g.4457718G>CCOSN2525693hsa-miR-6795-5pchr194457718GCgcccCCCCCCgccggUGGGGGGAm6b
UBXN6chr19:g.4457718G>CCOSN2525693hsa-miR-6885-5pchr194457718GCgcccCCCCCCgccggAGGGGGGCm6b
UBXN6chr19:g.4457718G>CCOSN2525693hsa-miR-6887-5pchr194457718GCgcccCCCCCCgccggUGGGGGGAm6b
UBXN6chr19:g.4457718G>CCOSN2525693hsa-miR-7109-5pchr194457718GCgcccCCCCCCgccggCUGGGGGGm6c
UBXN6chr19:g.4457718G>CCOSN2525693hsa-miR-744-5pchr194457718GCgccCCCCGCcgccggUGCGGGGCm6b
UBXN6chr19:g.4457718G>CCOSN2525693hsa-miR-8072chr194457718GCgccccCCGCCGCCggGGCGGCGGm8a
UBXN6chr19:g.4457718G>CCOSN2525693hsa-miR-1237-5pchr194457718GCgcCCCCCGccgccggCGGGGGCGm6a
UBXN6chr19:g.4457718G>CCOSN2525693hsa-miR-1908-5pchr194457718GCgccCCCCGCCGccggCGGCGGGGm8a
UBXN6chr19:g.4457718G>CCOSN2525693hsa-miR-328-5pchr194457718GCGCCCCCCCccgccggGGGGGGGCm8a
UBXN6chr19:g.4457718G>CCOSN2525693hsa-miR-3656chr194457718GCgcccCCCGCCgccggGGCGGGUGm6a
UBXN6chr19:g.4457718G>CCOSN2525693hsa-miR-3960chr194457718GCgccccCCGCCGCCggGGCGGCGGm8a
UBXN6chr19:g.4457718G>CCOSN2525693hsa-miR-4285chr194457718GCgcccccCGCCGCcggGCGGCGAGm6a
UBXN6chr19:g.4457718G>CCOSN2525693hsa-miR-4467chr194457718GCgcccccCGCCGCCggUGGCGGCGm7b
UBXN6chr19:g.4457718G>CCOSN2525693hsa-miR-4508chr194457718GCgccCCCCGCcgccggGCGGGGCUm6a
UBXN6chr19:g.4457718G>CCOSN2525693hsa-miR-4525chr194457718GCgcccCCCCCCgccggGGGGGGAUm6a
UBXN6chr19:g.4457718G>CCOSN2525693hsa-miR-4706chr194457718GCgccCCCCGCcgccggAGCGGGGAm6b
UBXN6chr19:g.4457718G>CCOSN2525693hsa-miR-4749-5pchr194457718GCgccCCCCGCcgccggUGCGGGGAm6b
UBXN6chr19:g.4457718G>CCOSN2525693hsa-miR-4781-5pchr194457718GCgccCCCCGCcgccggUAGCGGGGm6c
UBXN6chr19:g.4457718G>CCOSN2525693hsa-miR-4787-5pchr194457718GCgcCCCCCGCcgccggGCGGGGGUm7a
UBXN6chr19:g.4457718G>CCOSN2525693hsa-miR-663achr194457718GCgccCCCCGCCgccggAGGCGGGGm7b
UBXN6chr19:g.4457718G>CCOSN2525693hsa-miR-6752-5pchr194457718GCgcccCCCCCCgccggGGGGGGUGm6a
UBXN6chr19:g.4457718G>CCOSN2525693hsa-miR-6770-3pchr194457718GCgccccccGCCGCCggCUGGCGGCm6c
UBXN6chr19:g.4457718G>CCOSN2525693hsa-miR-6787-5pchr194457718GCgccCCCCGCCgccggUGGCGGGGm7b
UBXN6chr19:g.4457718G>CCOSN2525693hsa-miR-6795-5pchr194457718GCgcccCCCCCCgccggUGGGGGGAm6b
UBXN6chr19:g.4457718G>CCOSN2525693hsa-miR-6885-5pchr194457718GCgcccCCCCCCgccggAGGGGGGCm6b
UBXN6chr19:g.4457718G>CCOSN2525693hsa-miR-6887-5pchr194457718GCgcccCCCCCCgccggUGGGGGGAm6b
UBXN6chr19:g.4457718G>CCOSN2525693hsa-miR-7109-5pchr194457718GCgcccCCCCCCgccggCUGGGGGGm6c
UBXN6chr19:g.4457718G>CCOSN2525693hsa-miR-744-5pchr194457718GCgccCCCCGCcgccggUGCGGGGCm6b
UBXN6chr19:g.4457718G>CCOSN2525693hsa-miR-8072chr194457718GCgccccCCGCCGCCggGGCGGCGGm8a
UBXN6chr19:g.4448348G>TCOSM4977083hsa-miR-1226-3pchr194448348GTcaggacCTGGTGAagUCACCAGCm7a1N55-VS-1T55[oesophagus][NS][carcinoma][squamous_cell_carcinoma]
UBXN6chr19:g.4448348G>TCOSM4977083hsa-miR-1911-3pchr194448348GTcaggaCCTGGTGaagCACCAGGCm7a1N55-VS-1T55[oesophagus][NS][carcinoma][squamous_cell_carcinoma]
UBXN6chr19:g.4448348G>TCOSM4977083hsa-miR-197-3pchr194448348GTcaggaccTGGTGAAgUUCACCACm7a1N55-VS-1T55[oesophagus][NS][carcinoma][squamous_cell_carcinoma]
UBXN6chr19:g.4448348G>TCOSM4977083hsa-miR-3620-3pchr194448348GTcaggaccGGGTGAagUCACCCUGm6a1N55-VS-1T55[oesophagus][NS][carcinoma][squamous_cell_carcinoma]
UBXN6chr19:g.4448348G>TCOSM4977083hsa-miR-370-5pchr194448348GTcagGACCTGgtgaagCAGGUCACm6a1N55-VS-1T55[oesophagus][NS][carcinoma][squamous_cell_carcinoma]
UBXN6chr19:g.4448348G>TCOSM4977083hsa-miR-431-3pchr194448348GTcagGACCTGgtgaagCAGGUCGUm6a1N55-VS-1T55[oesophagus][NS][carcinoma][squamous_cell_carcinoma]
UBXN6chr19:g.4448348G>TCOSM4977083hsa-miR-4645-5pchr194448348GTcaggaCCTGGTgaagACCAGGCAm6a1N55-VS-1T55[oesophagus][NS][carcinoma][squamous_cell_carcinoma]
UBXN6chr19:g.4448348G>TCOSM4977083hsa-miR-4726-3pchr194448348GTcaggACCTGGtgaagACCCAGGUm6c1N55-VS-1T55[oesophagus][NS][carcinoma][squamous_cell_carcinoma]
UBXN6chr19:g.4448348G>TCOSM4977083hsa-miR-4733-3pchr194448348GTcaggaCCTGGTGaagCCACCAGGm7b1N55-VS-1T55[oesophagus][NS][carcinoma][squamous_cell_carcinoma]
UBXN6chr19:g.4448348G>TCOSM4977083hsa-miR-4746-5pchr194448348GTcaGGACCGGgtgaagCCGGUCCCm7a1N55-VS-1T55[oesophagus][NS][carcinoma][squamous_cell_carcinoma]
UBXN6chr19:g.4448348G>TCOSM4977083hsa-miR-4783-3pchr194448348GTcaggACCGGGtgaagCCCCGGUGm6b1N55-VS-1T55[oesophagus][NS][carcinoma][squamous_cell_carcinoma]
UBXN6chr19:g.4448348G>TCOSM4977083hsa-miR-6511a-3pchr194448348GTcaggaccTGGTGAagCCUCACCAm6c1N55-VS-1T55[oesophagus][NS][carcinoma][squamous_cell_carcinoma]
UBXN6chr19:g.4448348G>TCOSM4977083hsa-miR-6511b-3pchr194448348GTcaggaccTGGTGAagCCUCACCAm6c1N55-VS-1T55[oesophagus][NS][carcinoma][squamous_cell_carcinoma]
UBXN6chr19:g.4448348G>TCOSM4977083hsa-miR-665chr194448348GTcaggaCCTGGTgaagACCAGGAGm6a1N55-VS-1T55[oesophagus][NS][carcinoma][squamous_cell_carcinoma]
UBXN6chr19:g.4448348G>TCOSM4977083hsa-miR-6753-5pchr194448348GTcaggaCCTGGTGaagCACCAGGGm7a1N55-VS-1T55[oesophagus][NS][carcinoma][squamous_cell_carcinoma]
UBXN6chr19:g.4448348G>TCOSM4977083hsa-miR-6784-3pchr194448348GTcaggaccGGGTGAagUCUCACCCm6c1N55-VS-1T55[oesophagus][NS][carcinoma][squamous_cell_carcinoma]
UBXN6chr19:g.4448348G>TCOSM4977083hsa-miR-6802-3pchr194448348GTcaggaccGGGTGAAgUUCACCCCm7a1N55-VS-1T55[oesophagus][NS][carcinoma][squamous_cell_carcinoma]
UBXN6chr19:g.4448348G>TCOSM4977083hsa-miR-6837-5pchr194448348GTcaggaCCTGGTgaagACCAGGGCm6a1N55-VS-1T55[oesophagus][NS][carcinoma][squamous_cell_carcinoma]
UBXN6chr19:g.4448348G>TCOSM4977083hsa-miR-6862-3pchr194448348GTcaggaccGGGTGAagCCUCACCCm6c1N55-VS-1T55[oesophagus][NS][carcinoma][squamous_cell_carcinoma]
UBXN6chr19:g.4448348G>TCOSM4977083hsa-miR-6879-3pchr194448348GTcaggaccGGGTGAagUGUCACCCm6c1N55-VS-1T55[oesophagus][NS][carcinoma][squamous_cell_carcinoma]
UBXN6chr19:g.4448348G>TCOSM4977083hsa-miR-941chr194448348GTcaggaCCGGGTGaagCACCCGGCm7a1N55-VS-1T55[oesophagus][NS][carcinoma][squamous_cell_carcinoma]
UBXN6chr19:g.4448348G>TCOSM4977083hsa-miR-99b-5pchr194448348GTcaggacCGGGTGaagCACCCGUAm6a1N55-VS-1T55[oesophagus][NS][carcinoma][squamous_cell_carcinoma]
DNA & RNA Element - miRcode
Gene NameTypemicroRNASeed PositionSeed TypeTotal Cons%Tr Region
UBXN6High_conservedmiR-503chr19:44463147-mer-m836CDS
UBXN6High_conservedmiR-130ac/301ab/301b/301b-3p/454/721/4295/3666chr19:44484087-mer-m82CDS
UBXN6High_conservedmiR-7/7abchr19:44465848-mer49CDS
UBXN6High_conservedmiR-133abcchr19:44463717-mer-m853CDS
UBXN6High_conservedmiR-133abcchr19:44534587-mer-m831CDS
UBXN6High_conservedmiR-99ab/100chr19:44461527-mer-m818CDS
UBXN6High_conservedmiR-155chr19:44469077-mer-A124CDS
UBXN6High_conservedmiR-17/17-5p/20ab/20b-5p/93/106ab/427/518a-3p/519dchr19:44461877-mer-m82CDS
UBXN6High_conservedmiR-182chr19:44476227-mer-m831CDS
UBXN6High_conservedmiR-24/24ab/24-3pchr19:44524787-mer-m827CDS
UBXN6High_conservedmiR-338/338-3pchr19:44450677-mer-m823pUTR
UBXN6High_conservedmiR-338/338-3pchr19:44455747-mer-A129CDS
UBXN6High_conservedmiR-425/425-5p/489chr19:44452217-mer-m893pUTR
UBXN6High_conservedmiR-455-5pchr19:44450547-mer-A143pUTR
UBXN6Medium_conservedmiR-544/544ab/544-3pchr19:44475597-mer-m842CDS
UBXN6Medium_conservedmiR-653chr19:44483578-mer56CDS
UBXN6Medium_conservedmiR-874chr19:44461917-mer-m82CDS
UBXN6Medium_conservedmiR-186chr19:44576797-mer-m813CDS
UBXN6Medium_conservedmiR-28-5p/708/1407/1653/3139chr19:44455197-mer-m847CDS
UBXN6Medium_conservedmiR-299/299-3p/3563-3pchr19:44539507-mer-m87CDS
UBXN6Medium_conservedmiR-324-5pchr19:44450707-mer-m803pUTR
UBXN6Medium_conservedmiR-324-5pchr19:44452977-mer-m843pUTR
UBXN6Medium_conservedmiR-326/330/330-5pchr19:44466617-mer-m822CDS
UBXN6Medium_conservedmiR-326/330/330-5pchr19:44524738-mer20CDS
UBXN6Medium_conservedmiR-335/335-5pchr19:44454977-mer-m82CDS
UBXN6Medium_conservedmiR-125a-3p/1554chr19:44524277-mer-m842CDS
UBXN6Medium_conservedmiR-433chr19:44452197-mer-A193pUTR
UBXN6Medium_conservedmiR-433chr19:44483758-mer51CDS
UBXN6Medium_conservedmiR-491-5pchr19:44539527-mer-A12CDS
UBXN6Medium_conservedmiR-494chr19:44475487-mer-A118CDS
DNA & RNA Element - RAID2
Gene NameRAID IDInteractor 1Category 1ID 1Interactor 2Category 2ID 2MethodsScore
UBXN6RAID00717987hsa-miR-27a-5pmiRNAMIMAT0004501UBXN6mRNA80700Prediction0.1828
UBXN6RAID01263618hsa-miR-186-5pmiRNAMIMAT0000456UBXN6mRNA80700CLASH0.5483
UBXN6RAID01293680hsa-miR-663amiRNAMIMAT0003326UBXN6mRNA80700Prediction0.1828
UBXN6RAID01823975hsa-miR-4441miRNAMIMAT0018959UBXN6mRNA80700Prediction0.1828
UBXN6RAID02090587hsa-miR-6736-3pmiRNAMIMAT0027374UBXN6mRNA80700Prediction0.1828
UBXN6RAID02130584hsa-miR-646miRNAMIMAT0003316UBXN6mRNA80700Prediction0.1828
UBXN6RAID02335024hsa-miR-4443miRNAMIMAT0018961UBXN6mRNA80700Prediction0.1828
UBXN6RAID02593334hsa-miR-6846-5pmiRNAMIMAT0027592UBXN6mRNA80700Prediction0.1828
UBXN6RAID02653080hsa-miR-1908-5pmiRNAMIMAT0007881UBXN6mRNA80700Prediction0.1828
UBXN6RAID02830555hsa-miR-4749-3pmiRNAMIMAT0019886UBXN6mRNA80700Prediction0.1828
UBXN6RAID03471632hsa-miR-6848-5pmiRNAMIMAT0027596UBXN6mRNA80700Prediction0.1828
UBXN6RAID03615276hsa-miR-6812-5pmiRNAMIMAT0027524UBXN6mRNA80700Prediction0.1828
UBXN6RAID03663005hsa-miR-18a-3pmiRNAMIMAT0002891UBXN6mRNA80700CLASH0.5483
UBXN6RAID03848227hsa-miR-6787-5pmiRNAMIMAT0027474UBXN6mRNA80700Prediction0.1828
UBXN6RAID04398245FENDRRlncRNA400550UBXN6protein80700Microarray//RNA-seq0.6606