SUMO4
DNA & RNA Element - microRNA
Mirbase AccmiRNA NameGene IDGene SymbolmiRNA AlignmentAlignmentGene AlignmentmiRNA StartmiRNA EndGene StartGene EndGenome CoordinatesConservationAlign ScoreSeed CatEnergymirSVR Score
MIMAT0004489hsa-miR-16-1*387082SUMO4agUC-GUCGUGUC---AAUUAUGACc || ||| |::| ||||||| ggAGACAGGAUGGGAAAAAAUACUGa221246271[hg19:6:149722061-149722086:+]0.50851427-13.61-1.0692
MIMAT0004502hsa-miR-28-3p387082SUMO4agguccucGAGUGUUAGAUCAc :|:|:| |||||| gucuuaucUUUAUAUUCUAGUa215318339[hg19:6:149722133-149722154:+]0.50801266-10.60-0.2279
MIMAT0004515hsa-miR-29b-2*387082SUMO4gauucggugguacacUUUGGUc |||||| auugcuuuuuucuucAAACCAa28191212[hg19:6:149722006-149722027:+]0.50901206-5.70-0.1001
MIMAT0000433hsa-miR-142-5p387082SUMO4ucaucacgaaagauGAAAUAc |||||| cauucaggucuuauCUUUAUa28311331[hg19:6:149722126-149722146:+]0.50801206-6.25-0.1476
MIMAT0004749hsa-miR-424*387082SUMO4uaucguCGCGGAGUG-CAAAAc || :||||| ||||| uauuuuGC-UCUCACUGUUUUa216343363[hg19:6:149722158-149722178:+]0.50801210-13.84-0.7630
MIMAT0004752hsa-miR-20b*387082SUMO4gaccuucACGGGU-AUGAUGUCa | |: | |||||||| caccacaUUCUGACUACUACAGu21688110[hg19:6:149721903-149721925:+]0.50531467-14.17-0.8973
MIMAT0002859hsa-miR-516b387082SUMO4uuucACGAAGAAUGGAGGUCUa |||||||| ||||||| aaccUGCUUCUUUACUCCAGAa219728[hg19:6:149721822-149721843:+]0.50531747-23.00-0.4857
MIMAT0003232hsa-miR-568387082SUMO4cacacauauguaAAUAUGUa ||||||| cacauucuuuuaUUAUACAu29143162[hg19:6:149721958-149721977:+]0.50901407-6.68-1.0542
MIMAT0003241hsa-miR-576-5p387082SUMO4uuucugcaccucuUUAAUCUUa |||||||| uuacugcauucucAAUUAGAAa2105172[hg19:6:149721866-149721887:+]0.50531457-5.23-0.9245
MIMAT0003245hsa-miR-580387082SUMO4ggauUACUAA-GUAGUAAGAGUu | |||| | |||||||| gaccAAGAUUACUGCAUUCUCAa2194365[hg19:6:149721858-149721880:+]0.50531577-18.47-0.8104
MIMAT0003246hsa-miR-581387082SUMO4ugACUAGAUCUCUUGUGUUCu ||:| | | | ||||||| acUGGUAU-GUGUACACAAGc220169188[hg19:6:149721984-149722003:+]0.50901537-16.88-0.4985
MIMAT0003274hsa-miR-606387082SUMO4uaGAAACUAAAAG-UCA-UCAAa |||| || ||| ||| |||| auCUUU-AUAUUCUAGUAAGUUa220323344[hg19:6:149722138-149722159:+]0.50801280-9.79-1.2422
MIMAT0003294hsa-miR-625387082SUMO4ccugauaucuugAAAGGGGGa |||||||| ucuauucuuuugUUUCCCCCu210120140[hg19:6:149721935-149721955:+]0.50721457-18.31-1.0864
MIMAT0003300hsa-miR-631387082SUMO4cgacuccagacccGGUCCAGa :|||||| guggcauguucauUCAGGUCu29301321[hg19:6:149722116-149722136:+]0.50801246-14.51-0.1202
MIMAT0003335hsa-miR-657387082SUMO4ggaucucucccaCUCUUGGACGg |:|||||||| ---------aaaGGGAACCUGCu212114[hg19:6:149721816-149721829:+]0.50531517-20.69-0.3841
MIMAT0005459hsa-miR-1224-3p387082SUMO4gacUCCUCUCUCCUCC-ACCCc || :|||| ||| |||| ucaAGUGGAGA-CAGGAUGGGa219240260[hg19:6:149722055-149722075:+]0.50901200-20.08-1.0341
MIMAT0004927hsa-miR-708*387082SUMO4gaucuucGAGUGUCAGAUCAac :|:|:| |||||| ucuuaucUUUAUAUUCUAGUaa316319340[hg19:6:149722134-149722155:+]0.50801350-10.45-0.1609
MIMAT0004971hsa-miR-921387082SUMO4cuuaggaccAAGACAGGGAGUGAUc ||:|| |:||||||: aguaaguuaUUUUG-CUCUCACUGu217336359[hg19:6:149722151-149722174:+]0.50801420-16.63-0.1406
MIMAT0004978hsa-miR-935387082SUMO4cgccaucgccUUCGCCAUUGACc | | ||||||| uuuauuauacAUGAAGUAACUGg214151173[hg19:6:149721966-149721988:+]0.50901417-13.17-0.7513
MIMAT0005828hsa-miR-1183387082SUMO4acGGGUGAGAGUGGUAGUG--GAUGUCAc :|||| | ||:: | || ||||||| guUCCAC-CACAUUCUGACUACUACAGUa22684111[hg19:6:149721899-149721926:+]0.50531627-24.69-1.1271
MIMAT0005913hsa-miR-1261387082SUMO4uucgguuucGGAAUAGGUa |:||||||| aaauaccccCUUUAUCCAu211280298[hg19:6:149722095-149722113:+]0.50801467-14.13-0.7233
MIMAT0005919hsa-miR-548o387082SUMO4cgUUUUC-AUUGACGU-CAAAACc || || ||: |:| |||||| caAACAGCCAAUGGUAUGUUUUGa221210233[hg19:6:149722025-149722048:+]0.50901236-8.16-0.7640
MIMAT0005934hsa-miR-548p387082SUMO4uuUCAUUGACGUCAAAAACGAu ||||| | :| ||||||| cuAGUAAGU-UA--UUUUGCUc221334352[hg19:6:149722149-149722167:+]0.50801517-7.92-0.6969
MIMAT0009454hsa-miR-1979387082SUMO4aucAGUUCACUUC-GUC--ACCCUc |||||||:|| ||| ||||| acaUCAAGUGGAGACAGGAUGGGAa220237261[hg19:6:149722052-149722076:+]0.50901300-25.57-0.9064
MIMAT0011778hsa-miR-2278387082SUMO4ggucCGUUGUGUGUGACGAGAg |:|| :|: :|||||| ucuaGUAAGUUAUUUUGCUCUc219333354[hg19:6:149722148-149722169:+]0.50801386-18.68-0.1516
MIMAT0014998hsa-miR-3133387082SUMO4uaacccaaaauucuCAAGAAAu ||||||| uacuccagaacgcuGUUCUUUa291940[hg19:6:149721834-149721855:+]0.50531407-7.45-0.8082
MIMAT0015002hsa-miR-466387082SUMO4uacacaCAACGCACAUACACAUa || | ||||||||| caugaaGUAACUGGUAUGUGUAc218160182[hg19:6:149721975-149721997:+]0.50901537-13.20-0.5948
MIMAT0015037hsa-miR-3163387082SUMO4caGAAUGACGGGAGUA-AAAUAu | | | | :||:|| ||||| uuCAUUCAGGUCUUAUCUUUAUa221309331[hg19:6:149722124-149722146:+]0.50801240-9.84-1.1497
MIMAT0015046hsa-miR-3171387082SUMO4cuaUAUAUGUCUAAGGUAUGUAga | || | | ::|||||| uccACAUUCUUUUAUUAUACAUga322141164[hg19:6:149721956-149721979:+]0.50901290-6.67-0.1082
MIMAT0015051hsa-miR-3174387082SUMO4ccgagacguagagauuGAGUGAu |||||| aguaaguuauuuugcuCUCACUg28336358[hg19:6:149722151-149722173:+]0.50801206-14.16-0.1354
MIMAT0015056hsa-miR-3179387082SUMO4ugcaAAUUUAAAGUGGGGAAGa || :|||| ||||||| auucUUUUGUUUC-CCCCUUCc219123143[hg19:6:149721938-149721958:+]0.50721567-17.64-0.8214
MIMAT0015066hsa-miR-3065-5p387082SUMO4agGUC-GUAGUCA-CUAAAAC-AACu ||| || ::|| :||||| ||| aaCAGCCAAUGGUAUGUUUUGAUUGa222212237[hg19:6:149722027-149722052:+]0.50901230-13.33-0.8479
MIMAT0015073hsa-miR-3190-5p387082SUMO4agAGACCGGCAGAUGGAAGGUGu |:| |:: || |||||||| ucUUUUGUU-UCCCCCUUCCACa222125146[hg19:6:149721940-149721961:+]0.50721557-22.38-0.9258
MIMAT0015089hsa-miR-3202387082SUMO4uaauuucgaGAAGAGGGAAGGu :||| ||||||| auucuuuugUUUCCCCCUUCCa214123144[hg19:6:149721938-149721959:+]0.50721537-19.48-0.9960
MIMAT0016890hsa-miR-4261387082SUMO4acccaGGGACAAAGGa :::||||||| uauucUUUUGUUUCCc212122137[hg19:6:149721937-149721952:+]0.50721437-10.98-0.8572
MIMAT0016917hsa-miR-4287387082SUMO4uuUCACGGGAGUUC-CCUCu | || | ||||| |||| ugAUUGACAUCAAGUGGAGa218231250[hg19:6:149722046-149722065:+]0.50901250-16.16-0.9166
MIMAT0016926hsa-miR-4328387082SUMO4uuaggaccCUUUUGACc |||||||| cucaauuaGAAAACUGc2106177[hg19:6:149721876-149721892:+]0.50531457-8.85-0.6441
MIMAT0000265hsa-miR-204387082SUMO4uccguauccuacugUUUCCCUu ||||||| --------------AAAGGGAa2918[hg19:6:149721816-149721823:+]0.50961407-9.85-0.4095
MIMAT0000268hsa-miR-211387082SUMO4uccgcuuccuacugUUUCCCUu ||||||| --------------AAAGGGAa2918[hg19:6:149721816-149721823:+]0.50961407-9.85-0.4095
MIMAT0000427hsa-miR-133a387082SUMO4gucgaccaacuucccCUGGUUu |||||| acgcuguucuuuaaaGACCAAg282849[hg19:6:149721843-149721864:+]0.50531206-14.49-0.1148
MIMAT0000456hsa-miR-186387082SUMO4ucggguuuuccucuUAAGAAAc ||||||| guauaguuuucucuAUUCUUUu29109130[hg19:6:149721924-149721945:+]0.50531407-5.60-0.8540
MIMAT0000456hsa-miR-186387082SUMO4ucggguuuuccucuUAAGAAAc ||||||| uuucccccuuccacAUUCUUUu29132153[hg19:6:149721947-149721968:+]0.50901407-8.07-0.8057
MIMAT0000703hsa-miR-361-5p387082SUMO4caUGGGGACCUCUAAGACU-AUu :::|| | ||||||| || ugGUUCCACCACAUUCUGACUAc22182104[hg19:6:149721897-149721919:+]0.50531200-11.82-0.9518
MIMAT0000727hsa-miR-374a387082SUMO4gugaauaguccAACAUAAUAUu || ||||||| cuuccacauucUUUUAUUAUAc212139160[hg19:6:149721954-149721975:+]0.50901477-3.74-0.9274
MIMAT0004692hsa-miR-340387082SUMO4uuAGU-CAGAGUAACGAAAUAUu ||| ||||:|| ||||||| auUCAGGUCUUAU--CUUUAUAu221312332[hg19:6:149722127-149722147:+]0.50801647-14.19-1.0559
MIMAT0000770hsa-miR-133b387082SUMO4aucgaccaacuucccCUGGUUu |||||| acgcuguucuuuaaaGACCAAg282849[hg19:6:149721843-149721864:+]0.50531206-13.26-0.1148
MIMAT0002807hsa-miR-491-5p387082SUMO4ggaguACCUU--CCCAAGG-GGUGa || || |||||| |||| aaaacUGCAAUUUGGUUCCACCACa2187094[hg19:6:149721885-149721909:+]0.50531200-17.60-1.1545
MIMAT0004955hsa-miR-374b387082SUMO4gugaaucguccAACAUAAUAUa || ||||||| cuuccacauucUUUUAUUAUAc212139160[hg19:6:149721954-149721975:+]0.50901477-2.40-0.9274
DNA & RNA Element - TRANSFAC
AccessionASDescriptionSpeciesEntrezPubmedBinding Info
G051241SUMO4Homo sapiens387082
DNA & RNA Element - TargetScan
Gene NameUTR Region StartUTR Region EndAIRTotal Normalized 3P-seq-tags & PseudocountsStrandhg19_chromosomeGenome StartGenome End
SUMO4; SMT3H413621005.01+chr6149721815149722177
SUMO4; SMT3H43633670.25.01+chr6149722177149722182
DNA & RNA Element - RepTar
Gene NamemiRNABeginEndProfile
SUMO4hsa-miR-466beg:163end:182pic:3' TACACACAACGCACATACACATA 5'& || ||||||||| &5' ------GTAACTGGTATGTGTA- 3'
SUMO4hsa-miR-580beg:46end:66pic:3' GGATTACTAAGTA-GTAAGAGTT 5'& |||| ||||||||| &5' ------GATTACTGCATTCTCAA 3'
SUMO4hsa-miR-3179beg:124end:143pic:3' TGCAAATTTAAAGTGGGGAAGA 5'& || .|||| ||||||| &5' ----TTTTGTTTC-CCCCTTC- 3'
SUMO4hsa-miR-3202beg:129end:145pic:3' TAATTTCGAGAAGAGGGAAGGT 5'& .||| |||||||| &5' ---------TTTCCCCCTTCCA 3'
SUMO4kshv-miR-K12-2beg:95end:111pic:3' GTCTAGCTGGGCCTGATGTCAA 5'& .|||. |||||||| &5' -----TGACT---ACTACAGT- 3'
SUMO4hsv1-miR-H6-5pbeg:129end:146pic:3' ATGTGGGGGGACGGAAGGTGG 5'& . ||| |||||||| &5' ----TTTCCC--CCTTCCAC- 3'
SUMO4ebv-miR-BART12beg:86end:110pic:3' TTGGTGTGGT-TTG-TGGTGTCCT 5'& ||||||.. .|| ||.|||| &5' -ACCACATTCTGACTACTACAG-- 3'
SUMO4hsa-miR-1beg:321end:337pic:3' TATGTATGAAGAAATGTAAGGT 5'& ||||||.||||.| &5' ---------TCTTTATATTCTA 3'
SUMO4hsa-miR-1183beg:90end:111pic:3' ACGGGTGAGAGTGGTAGTGGATGTCAC 5'& ||.||| ||.| ||||||| &5' ----CATTCTGACTA----CTACAGT- 3'
SUMO4hsa-miR-122beg:5end:26pic:3' GTTTGTGGTAACAGT-GTGAGGT 5'& ||| || .|||||| &5' -----ACCTGCTTCTTTACTCCA 3'
SUMO4hsa-miR-1255abeg:304end:316pic:3' TTAGATGAAAGAAACGAGTAGGA 5'& ||.||||.| &5' -------------TGTTCATTC- 3'
SUMO4hsa-miR-1255bbeg:304end:316pic:3' TTGGTGAAAGAAACGAGTAGGC 5'& ||.||||.| &5' ------------TGTTCATTC- 3'
SUMO4hsa-miR-1258beg:83end:103pic:3' AAGGTGCTGGATTAGGATTGA 5'& |||||| || ||.||.||| &5' TTCCACCAC---ATTCTGACT 3'
SUMO4hsa-miR-1261beg:282end:299pic:3' TTCGGTTTCGGAATAGGTA 5'& || |.|||||||| &5' ---CCCC--CTTTATCCAT 3'
SUMO4hsa-miR-1265beg:76end:100pic:3' TTGTTGTGAAC-----TGGTGTAGGAC 5'& |.||| |||||||.||| &5' ------ATTTGGTTCCACCACATTCTG 3'
SUMO4hsa-miR-1265beg:139end:151pic:3' TTGTTGTGAACTGGTGTAGGAC 5'& ||||||.|| &5' ------------CCACATTCT- 3'
SUMO4hsa-miR-1299beg:11end:29pic:3' AGGGAGTGTGTCTTAAGGTCTT 5'& |.|.|.|| ||||||| &5' TTCTTTAC-------TCCAGAA 3'
SUMO4hsa-miR-1323beg:213end:234pic:3' TCTTTTACGGGGAGT---CAAAACT 5'& ||| ||||||| &5' -------GCCAATGGTATGTTTTGA 3'
SUMO4hsa-miR-1468beg:240end:260pic:3' GTCG-CTTTGTCCGTTTGCCTC 5'& ||. ||.||||| |.||. &5' -AGTGGAGACAGG---ATGGG- 3'
SUMO4hsa-miR-185beg:183end:207pic:3' AGTCCT-TGACGGAAAGAGAGGT 5'& || |.|||.|||.|||.|| &5' --AGCATATTGCTTTTTTCTTCA 3'
SUMO4hsa-miR-186beg:19end:40pic:3' TCGGGTTTTCCTCTTAAGAAAC 5'& .|||.|| | .|||||| &5' --TCCAGAACGCT-GTTCTTT- 3'
SUMO4hsa-miR-190bbeg:181end:194pic:3' TTGGGTTATAGTTTGTATAGT 5'& |||.|||||. &5' ----------CAAGCATATT- 3'
SUMO4hsa-miR-199a-3pbeg:40end:57pic:3' ATTGGTTACACGTCTGATGACA 5'& .|||| |||.||||| &5' -GACCA------AGATTACTG- 3'
SUMO4hsa-miR-199b-3pbeg:40end:57pic:3' ATTGGTTACACGTCTGATGACA 5'& .|||| |||.||||| &5' -GACCA------AGATTACTG- 3'
SUMO4hsa-miR-206beg:321end:337pic:3' GGTGTGTGAAGGAATGTAAGGT 5'& ||.|||.||||.| &5' ---------TCTTTATATTCTA 3'
SUMO4hsa-miR-224starbeg:334end:363pic:3' ACA-TCAGTGATCCC---GTGGTAAAA 5'& || |||.|.| |||..|||| &5' -GTAAGTTATTTTGCTCTCACTGTTTT 3'
SUMO4hsa-miR-299-3pbeg:128end:148pic:3' TTCGCCAAAT-GGTAGGGTGTAT 5'& |||| || |.|||||| &5' -----GTTTCCCCCTTCCACAT- 3'
SUMO4hsa-miR-30c-1starbeg:133end:145pic:3' CCTCATTTGTTGGGAGAGGGTC 5'& ||| ||.||| &5' -----------CCC-CTTCCA- 3'
SUMO4hsa-miR-3127beg:130end:153pic:3' GAAGGGT-AAGGTGTTCGGGACTA 5'& ||||| ||||||| |..| &5' -TTCCCCCTTCCACATTCTTT--- 3'
SUMO4hsa-miR-3127beg:82end:101pic:3' GAAGGGTAAGGTGTTCGGGACTA 5'& |.||| ||||| ..|||| &5' --TTCCA--CCACA--TTCTGA- 3'
SUMO4hsa-miR-3129beg:39end:58pic:3' TTTGGTTAGAGATGTGATGACG 5'& |.||||| |.|||||| &5' AGACCAAG------ATTACTGC 3'
SUMO4hsa-miR-3134beg:287end:301pic:3' TTATACATCAGAAAATAGGTAGT 5'& |||||||||.| &5' ------------TTTATCCATTA 3'
SUMO4hsa-miR-3138beg:281end:314pic:3' TGAGGGAGATGGAGTG--------ACAGGTGT 5'& || ||||.||.| ||. |||.||. &5' ACCCCCTTTATC-CATTAGTGGCATGTTCAT- 3'
SUMO4hsa-miR-3146beg:167end:178pic:3' GGTAAGAAAGATAGGATCGTAC 5'& ||.|.||| &5' --------------CTGGTATG 3'
SUMO4hsa-miR-3148beg:182end:204pic:3' TTCGTGTGTGGTCAAAAAAGGT 5'& |||||.|. |||||||. &5' AAGCATATTGC--TTTTTTCT- 3'
SUMO4hsa-miR-3190-3pbeg:122end:145pic:3' GAGAGACCGGCAGATGGAAGGT 5'& |||.| |.. || ||||||| &5' -TCTTTTGTT-TCCCCCTTCCA 3'
SUMO4hsa-miR-3190-5pbeg:122end:147pic:3' AGAGACCGGCAGATGGAAGGTGT 5'& |||.| |.. || ||||||||| &5' TCTTTTGTT-TCCCCCTTCCACA 3'
SUMO4hsa-miR-378beg:92end:116pic:3' GGAAGACTGA-GGT-TCAGGTCA 5'& |||||||| |.| ||| .||| &5' --TTCTGACTACTACAGTATAGT 3'
SUMO4hsa-miR-424starbeg:213end:233pic:3' TATCGTCGCGGA---GTGCAAAAC 5'& |||| | .|.|||||| &5' ----CAGC-CAATGGTATGTTTTG 3'
SUMO4hsa-miR-4252beg:295end:306pic:3' ACCACGACTGAGTCACCGG 5'& |.|||||| &5' ----------TTAGTGGC- 3'
SUMO4hsa-miR-4276beg:155end:173pic:3' CGTGTAC-TCAGTGACTC 5'& .||||| ||| ||||. &5' -TACATGAAGTAACTGG- 3'
SUMO4hsa-miR-4281beg:132end:150pic:3' GGGGGGAGGGGCCCTGGG 5'& ||||||.|| |..| &5' -CCCCCTTCCAC--ATTC 3'
SUMO4hsa-miR-4306beg:187end:207pic:3' ATGACGGAAAGAGAGGT 5'& ||.|||.|||.|||.|| &5' TATTGCTTTTTTCTTCA 3'
SUMO4hsa-miR-4328beg:267end:284pic:3' TTAGGACCCTTTTGACC 5'& .||.||| |||||. &5' GATTCTGTGAAAAT--- 3'
SUMO4hsa-miR-499-5pbeg:307end:324pic:3' TTTGTAGTGACGTTCAGAATT 5'& |||.| ||.|||||| &5' -----TCATT-CAGGTCTTA- 3'
SUMO4hsa-miR-516bbeg:8end:28pic:3' TTTCACGAAGAATGGAGGTCTA 5'& |||||||| ||||||| &5' ----TGCTTCTTTACTCCAGA- 3'
SUMO4hsa-miR-555beg:310end:328pic:3' TAGTCTCCAAGTC--GAATGGGA 5'& ||||| ||||.|.| &5' --------TTCAGGTCTTATCTT 3'
SUMO4hsa-miR-589starbeg:212end:234pic:3' AGACCCTTGG---CCGTAAACAAGACT 5'& |.|| ||.| ||||.||| &5' ------AGCCAATGGTA--TGTTTTGA 3'
SUMO4hsa-miR-625beg:118end:141pic:3' CCTGATATCTTG--AAAGGGGGA 5'& |||| ||||||||| &5' ---CTATTCTTTTGTTTCCCCCT 3'
SUMO4hsa-miR-647beg:211end:220pic:3' CTTCCTTCACTCACGTCGGTG 5'& |||||| &5' --------------CAGCCA- 3'
SUMO4hsa-miR-711beg:123end:144pic:3' GAATGCAGAGAGGGACCCAGGG 5'& ||| .||.|| |||| ||| &5' CTTTTGTTTCCCCCT---TCC- 3'
SUMO4hsa-miR-921beg:342end:359pic:3' CTTAGGACCAAGACAGGGAGTGATC 5'& ||.|| |.||||||. &5' ---------TTTTG-CTCTCACTG- 3'
SUMO4hsv1-miR-H11beg:343end:364pic:3' CGCAAGCGTGAA--ACAGGATT 5'& ||.|| || |||..||| &5' ---TTTGCTCTCACTGTTTTAA 3'
SUMO4kshv-miR-K12-4-3pbeg:314end:337pic:3' AGTCGATCCGGAGTC-----ATAAGAT 5'& |||.||.| ||||||| &5' ------AGGTCTTATCTTTATATTCTA 3'
SUMO4sv40-miR-S1-3pbeg:237end:255pic:3' TGAGTCCCGTACTTTGTCCG 5'& ||| |.. ||.||||| &5' --TCAA-GTG-GAGACAGG- 3'
DNA & RNA Element - miRNAMap
Gene NameMature miRNATarget StartTarget EndmiRNA 3-5AlignmentTarget 5-3
SUMO4; SMT3H4hsa-miR-194472479A-GGUGUACCUCAA----------------------CGACAAUGU ||| ||| |||||||||AACCAA--GGACAAUUUUAUAACUUUUGUGUACAUAGCUGUUACAU
SUMO4; SMT3H4hsa-miR-5805865----------------------GGAUUACUAAGUA-GUAAGAGUU || || |||| |||||||||CCAGAACGCUGUUCUUUAAAGACC-AA-GAUUACUGCAUUCUCAAU
SUMO4; SMT3H4hsa-miR-581181188-----------------------UGACUAGAUCUCUUGUGUUCU ||||:| | | |||||||AUUCUUUUAUUAUACAUGAAGUAACUGGUAU-GUGUACACAAGC
SUMO4; SMT3H4hsa-miR-625133140UCCUGAUAUCUUG------------------------AAAGGGGGA ||||| || |||||||||U-GACUACU--ACAGUAUAGUUUUCUCUAUUCUUUUGUUUCCCCCUU
SUMO4; SMT3H4hsa-let-7b88109UUGGUGUGUUG--GAUGAUGGAGU ||||||: |||||||CACCACAUUCUGACUACUACA---
SUMO4; SMT3H4hsa-let-7i87109UGUCGUGU----UUGAUGAUGGAGU || |||| :||||||||CCACCACAUUCUGACUACUACA---
SUMO4; SMT3H4hsa-miR-10a236256GUGUUUAA-GCCUAGAUGUCCCAU ||| :||| |||||GACAUCAAGUGGAG--ACAGGA--
SUMO4; SMT3H4hsa-miR-136237261AGGUAGU--AGUUUUGU-UUACCUCA ||||| | :|:||| :||||:-ACAUCAAGUGGAGACAGGAUGGGA-
SUMO4; SMT3H4hsa-miR-140425443GAUGGUAUCCCAUUUUGGUGA ||:||| |||||||||UUAUCAUU--GUAAAACCAA-
SUMO4; SMT3H4hsa-miR-141837-GGU---AGAAAU--GGUCU-GUCACAAU || |||||| ||||| |: ||||ACCUGCUUCUUUACUCCAGAACGCUGUUC
SUMO4; SMT3H4hsa-miR-149242262CCUCACUUCUGUGCCUCGGUCU- ||||:||||| ||| : :||-AAGUGGAGACA-GGA-UGGGAA
SUMO4; SMT3H4hsa-miR-185190208CUUGACGGAAAGAGAGGU- |:|||:|||:|||:||-UAUUGCUUUUUUCUUCAA
SUMO4; SMT3H4hsa-miR-192302322-CCG-ACAGUUAAGUAUCCAGUC ||| |||: ||||| ||||UGGCAUGUUCAUUCA--GGUCU-
SUMO4; SMT3H4hsa-miR-194464481AGGUGUACCUCAACGACAAUGU- :|||| |||||||||-GUACAUA-----GCUGUUACAU
SUMO4; SMT3H4hsa-miR-224294307AUUUGCCUUGGUGAUCACUGAAC |||:|||||:|--------UCCAUUAGUGGCA--
SUMO4; SMT3H4hsa-miR-299-3p8197UUCGCCAAAUGGUAGGGUGUAU :|||| ||| ||||||--UUGGUU--CCA--CCACAUU
SUMO4; SMT3H4hsa-miR-337235261UUUCCGUAGUAUAUCCUCG-----ACCU- | ||||| :| |||| |||:--UGACAUCAAGU-GGAGACAGGAUGGGA
SUMO4; SMT3H4hsa-miR-339234256-ACUCGAGG--ACCUCCUGUCCCU ||| || ||||| |||||UUGACAUCAAGUGGAG-ACAGGA-
SUMO4; SMT3H4hsa-miR-363*7493UUUAACGU--AGCACUAGGUGGGC |||| |:| ||||||---CUGCAAUUUGGU-UCCACCA-
SUMO4; SMT3H4hsa-miR-378236257UGUGUCCUGGACCUCAGUCCUC ||| | ||||| |||||-GACAUCAAGUGGAGACAGGAU
SUMO4; SMT3H4hsa-miR-454-5p243261-CGUCUCUGUUAUAACUAUCCCA |::|||||| |||:||AGUGGAGACAG----GAUGGGA-
SUMO4; SMT3H4hsa-miR-490302321GUCGUACCUCAGGAGGUCCAAC :||||| || |:|||||UGGCAUGU--UCAUUCAGGUC-
SUMO4; SMT3H4hsa-miR-4915895-AGGAGU----------ACCUUC--CCAAGG-GGUGA |:|||| || |||||| ||||AUUCUCAAUUAGAAAACUGCAAUUUGGUUCCACCACA
SUMO4; SMT3H4hsa-miR-492299324UUCUUAGAACAGGGC-GUCCAGGA- || | |||:| ||||||:|UAGUGGCAUGUUCAUUCAGGUCUUA
SUMO4; SMT3H4hsa-miR-493-5p160185UUACUUUCG-GAUGG--UACAUGUU |||||: ||: : :||||||CAUGAAGUAACUGGUAUGUGUACAC
SUMO4; SMT3H4hsa-miR-499302325AAUUUGU---AGUGACGUUCAGAAUU ::|| |||:| ||:||||||--UGGCAUGUUCAUU-CAGGUCUUAU
SUMO4; SMT3H4hsa-miR-513252282UAUUUACU-------GUGGAG-GGACACUU- ::|||: :||: :|||||||-AGGAUGGGAAAAAAUACUGAUUCUGUGAAA
SUMO4; SMT3H4hsa-miR-516-5p1029UUUCACGAAGAAUGGAGGUCUAC |||||||| |||||||---CUGCUUCUUUACUCCAGAA-
SUMO4; SMT3H4hsa-miR-518c*429GUCUUUCACGAAGG---GAGGUCUCU :||| ||||||: |||||||GGGAACCUGCUUCUUUACUCCAGAA-
SUMO4; SMT3H4hsa-miR-518f*229-UCUCUUUCACGAAGG---GAGAUCUC ||:||| ||||||: ||| |||AAGGGAACCUGCUUCUUUACUCCAGAA
SUMO4; SMT3H4hsa-miR-519e*393410CUUUCACGAGGGAAAACCUCUU- ||:|| ||||||:|----UUGUUCAA--UUGGAGGAU
SUMO4; SMT3H4hsa-miR-526b538560UUGUCUUUCACGAAGGGAGUUCUC :||||||| ||||:|||||-CUAGAAAGUUUUUCCUUCAAGU-
SUMO4; SMT3H4hsa-miR-532470490-UGCCAGGAUGUGAGUUCCGUAC :| || ||||: :|:||||AGCUGU--UACAUGUAGGGCAA-
SUMO4; SMT3H4hsa-miR-553350364UUUUGUUUUAGAGUGGCAAAA- ||||||:|||||--------CUCUCACUGUUUUA
SUMO4; SMT3H4hsa-miR-5804867GGAUUACUAAGUA-GUAAGAGUU- |||| |||||||||-----AGAUUACUGCAUUCUCAAU
SUMO4; SMT3H4hsa-miR-583321CAUUACCCU-GGAAGGAGAAAC |||| ||| |:|||||----AGGGAACCUGCUUCUUUA
SUMO4; SMT3H4hsa-miR-588288307CAAGAU-UGGGUAA-CACCGGUU || |:||||| |||||--CCUUUAUCCAUUAGUGGCA--
SUMO4; SMT3H4hsa-miR-589339AGACCCUUGGCCGU---AA------------ACAAGACU ||||||| || || ||||||--AGGGAACCUGCUUCUUUACUCCAGAACGCUGUUCUU-
SUMO4; SMT3H4hsa-miR-600480504CUCGUUCCG--AGAACAGACAUUCA- |:|:||| ||| |||| |||||-UGUAGGGCAAUCU-GUCUUUAAGUA
SUMO4; SMT3H4hsa-miR-608254290-UGCCUC-------GAC-AGGGUUGUG--GUGGGGA |:||: ||| |:|:: | :|||||GAUGGGAAAAAAUACUGAUUCUGUGAAAAUACCCCC
SUMO4; SMT3H4hsa-miR-610331354-AGGGUCGUGU-GUAAAUCGAGU |:|:||:| :|||| ||||AUUCUAGUAAGUUAUUUUGCUCU
SUMO4; SMT3H4hsa-miR-619300322UGAC-CCGUGUUUGUACAGGUCCAG- | ||||:: || |:||||||--AGUGGCAUGUUCA--UUCAGGUCU
SUMO4; SMT3H4hsa-miR-623207250-UGGGUUGUCGGGG-----ACG-------------UUC-CCUA ||| ||||||| ||: ||| |||AACCAAACAGCCAAUGGUAUGUUUUGAUUGACAUCAAGUGGAG
SUMO4; SMT3H4hsa-miR-625256292-UCCU-------------GAUAUCUUGAAAGGGGGA- :||| ||:| ||| ||||||UGGGAAAAAAUACUGAUUCUGU-GAAAAUACCCCCUU
SUMO4; SMT3H4hsa-miR-657316GGAUCUCUCCCACUCUUGGACGG- |:||||||||:-----------AGGGAACCUGCUU
SUMO4; SMT3H4hsa-miR-668220241CAUCACCCGGCUCGGCUCACUGU- ||| :| ::|| |||||---AUGGUAUGUUUUGAUUGACAU
SUMO4; SMT3H4hsa-miR-671536571UGGAGG--UCG---GGGAGGUC----CCGAAGGA- ||| ||: :|||:|| ||||||:|UCCUAGAAAGUUUUUCCUUCAAGUCAGGCUUCUUA
SUMO4; SMT3H4hsa-miR-767-5p192226GUACGA-------------GUCUGUUGGU-ACCACGU |||| || |||:||| ||||-UUGCUUUUUUCUUCAAACCAAACAGCCAAUGGUA--
SUMO4; SMT3H4hsa-miR-768-5p121147UAGUGAGGCAUGAAAGUAGGAGGUUG- :|:||: | |||| |||:| ||-CUAUUCUUUUGUUUCCCCCUUCCACA
SUMO4; SMT3H4hsa-miR-801471493CAGCUAAGGCG---UGCGUCUCGUUAG- |:|: |:|:||:||||||------GCUGUUACAUGUAGGGCAAUCU
SUMO4; SMT3H4hsa-let-7b85108uuGGU-GUGUUGGA-UGAUGGAGU ||| |||| :|| |||||: ||ttCCACCACATTCTGACTACTACA
SUMO4; SMT3H4hsa-miR-10a238257GU-GUUUAAGCCUAGAUGUCCCAu|| |||:| ||| ||||| |CATCAAGT--GGA--GACAGGATg
SUMO4; SMT3H4hsa-miR-136227250agguAGUAGUU-UUGUUUACCUCa | ||::| | |||:|||||gtttTGATTGACATCAAGTGGAGa
SUMO4; SMT3H4hsa-miR-140425443gAUGGUAUCCCAUUUUGGUga ||:||| |||||||||tTATCAT--TGTAAAACCAag
SUMO4; SMT3H4hsa-miR-1411236gGUAGAAAU--GGUC-UGUCACAAu | |||||| |||| ||: ||||gCTTCTTTACTCCAGAACGCTGTTc
SUMO4; SMT3H4hsa-miR-149231254cCUCACUUCUGU--GCCUCGGUCu || ||| || :|||| |||tGATTGACATCAAGTGGAGACAGg
SUMO4; SMT3H4hsa-miR-185189206cuUGACGGAAAGAGAGGU |:|||:|||:|||:||atATTGCTTTTTTCTTCA
SUMO4; SMT3H4hsa-miR-192303322CCG-ACAGUUAAGUAUCCAGuc||| |||: |||| |||||GGCATGTTCATTC--AGGTCtt
SUMO4; SMT3H4hsa-miR-194458479agguguaccucAACGACAAUGU | |||||||||ttttgtgtacaTAGCTGTTACA
SUMO4; SMT3H4hsa-miR-224286308auuugccUUGGUGAUCACUGAAC | |||:|||||:| ||cccctttATCCATTAGTGGCATG
SUMO4; SMT3H4hsa-miR-299-3p7996uucgCCAAAUGGUAGGGUGUAu |||| ||| ||||||atttGGTT--CCA--CCACATt
SUMO4; SMT3H4hsa-miR-337233255uuuCCGUAGUAUAUCCUC-GACCU | ||||| :| |||| | |||attGACATCAAGT-GGAGACAGGA
SUMO4; SMT3H4hsa-miR-339235256ACUCGAG--GACCUCCUGUCCcu||| || |||| ||||||TGACATCAAGTGGA-GACAGGat
SUMO4; SMT3H4hsa-miR-363*7193UUUAACGUAGCACU-AGGUGGgc||| |||| : ||: ||||||AAACTGCAATTTGGTTCCACCac
SUMO4; SMT3H4hsa-miR-378237256UGU-GUCCUGGACCUCAGUCCUc||| || | ||||| |||||ACATCAAG---TGGAGACAGGAt
SUMO4; SMT3H4hsa-miR-454-5p244261CGUCUCUGUUAUAACUAUCCca|::||||||: |||:||GTGGAGACAG----GATGGGaa
SUMO4; SMT3H4hsa-miR-490302321guCGUACCUCAGGAGGUCCAac ||||| || |:|||||tgGCATG--TTCATTCAGGTct
SUMO4; SMT3H4hsa-miR-4915994AGGAGU--ACCUU----C------CCAAGG-GGUGa|:|||| | ||| | |||||| ||||TTCTCAATTAGAAAACTGCAATTTGGTTCCACCACa
SUMO4; SMT3H4hsa-miR-499303324aauuuguAGUGACGUUCAGAAUu |||:| ||:||||||ggcatgtTCATT-CAGGTCTTAt
SUMO4; SMT3H4hsa-miR-513258280uaUUUACUGUGG-AGGGACACUU ||| |:||: ::|||||||ggAAAAAATACTGATTCTGTGAA
SUMO4; SMT3H4hsa-miR-516-5p729UUUCACGAAGAAUGGAGGUCUac|| |||||||| |||||||AACCTGCTTCTTTACTCCAGAac
SUMO4; SMT3H4hsa-miR-518c*429guCUUUCACGAAGG---GAGGUCUcu ||| ||||||: |||||||ggGAACCTGCTTCTTTACTCCAGAac
SUMO4; SMT3H4hsa-miR-518f*328UCUCUUUCACGAAGG---GAGAUCUc||:||| ||||||: ||| |||AGGGAACCTGCTTCTTTACTCCAGAa
SUMO4; SMT3H4hsa-miR-519e*376408cUUUCACGAG-----GGAA------AACCUCUU ||| | ||| |||| ||||||:|aAAAATTCTCACATACCTTGTTCAATTGGAGGA
SUMO4; SMT3H4hsa-miR-526b537560uugUCUUUCACGAAGGGAGUUCuc ||||||| :||||:|||||cctAGAAAGTTTTTCCTTCAAGtc
SUMO4; SMT3H4hsa-miR-532469490ugCCAGGAUGUGAGUUCCGUac | | :||||: :|:||||taGCTGTTACATGTAGGGCAat
SUMO4; SMT3H4hsa-miR-553342362uuuuguuuuAGAGUGGCAAAA ||||||:|||||ttattttgcTCTCACTGTTTT
SUMO4; SMT3H4hsa-miR-5804565GGAUUACUAA-GUAGUAAGAGUU|| || |||| | |||||||||CC-AA-GATTACTGCATTCTCAA
SUMO4; SMT3H4hsa-miR-581169188UGACUAGAUCUCUUGUGUUCu||||:| | | | |||||||ACTGGTAT-GTGTACACAAGc
SUMO4; SMT3H4hsa-miR-583120caUUACCC-UGGAAGGAGAAAc || ||| |||| |:|||||--AAAGGGAACCTGCTTCTTTa
SUMO4; SMT3H4hsa-miR-588287308caagAUUGGGUAA-CACCGguu | |:||||| |||||ccctTTATCCATTAGTGGCatg
SUMO4; SMT3H4hsa-miR-589139agaCCCUUGGCCG------UAA---------ACAAGAcu ||||||| || | | ||||||aaaGGGAACCTGCTTCTTTACTCCAGAACGCTGTTCTtt
SUMO4; SMT3H4hsa-miR-600479502cuCGUUCCG--AGAACAGACAUUCA |:|:||| || ||||| |||||atGTAGGGCAATC-TGTCTTTAAGT
SUMO4; SMT3H4hsa-miR-608267291UGCCU-CGACAGGGUUGUGGUGGGGA|| || |||| ||:||| |||:|ACTGATTCTGTGAAAATACC-CCCTT
SUMO4; SMT3H4hsa-miR-610332353AGGGUCGUGU-GUAAAUCGAGu|:|:||:| : :|||| ||||TTCTAGTAAGTTATTTTGCTCt
SUMO4; SMT3H4hsa-miR-619299320ugacCCGUGUUUGUACAGGUCCAG ||||:: || |:||||||tagtGGCATGTTCA--TTCAGGTC
SUMO4; SMT3H4hsa-miR-623208249UGGGUUGUCGG----------GGAC--------GUUC-CCUa||| ||||||| ::|| |||| |||ACCAAACAGCCAATGGTATGTTTTGATTGACATCAAGTGGAg
SUMO4; SMT3H4hsa-miR-625122140uccuGAUAUCUUGAAAGGGGGA || | | |||||||||tattCTTTTG---TTTCCCCCT
SUMO4; SMT3H4hsa-miR-625268290ucCUGAUAU-CUUGAAAGGGGGA ||:| |: ||| | ||||||ctGATTCTGTGAAAATACCCCCT
SUMO4; SMT3H4hsa-miR-657114ggaucucucccaCUCUUGGACGg |:||||||||---------aaaGGGAACCTGCt
SUMO4; SMT3H4hsa-miR-668217239caUCACCCGGCUCGGCUCACUGU | ||| :| ::|| |||||ccAATGGTATGTTTTGATTGACA
SUMO4; SMT3H4hsa-miR-671542569uggaggucgGGGAGGUC---CCGAAGGA ||:|| || ||||||:|aaagtttttCCTTCAAGTCAGGCTTCTT
SUMO4; SMT3H4hsa-miR-767-5p205227GUACGAGUCUGUUGG-UACCAcgu|| | || |||:|| |||||CAAAC-CAAACAGCCAATGGTatg
SUMO4; SMT3H4hsa-miR-768-5p115146uAGUGAGGCAUGAAAGUA------GGAGGUug |: |||: | ||||::| |:||||tTTTCTCTATTCTTTTGTTTCCCCCTTCCAca
SUMO4; SMT3H4hsa-miR-801468491cAGCUAAGGCGUGCGUCUCGUUAG | | | :: ||:|:||:||||||aTAGCTGTTACATGTAGGGCAATC
DNA & RNA Element - miRcode
Gene NameTypemicroRNASeed PositionSeed TypeTotal Cons%Tr Region
SUMO4High_conservedmiR-204/204b/211chr6:1497218238-mer73pUTR
SUMO4High_conservedmiR-219-5p/508/508-3p/4782-3pchr6:1497215777-mer-A10CDS
SUMO4High_conservedmiR-27abc/27a-3pchr6:1497220957-mer-A1113pUTR
SUMO4Medium_conservedmiR-653chr6:1497217947-mer-m87CDS
SUMO4Medium_conservedmiR-186chr6:1497218357-mer-A1113pUTR
SUMO4Medium_conservedmiR-186chr6:1497218557-mer-A1113pUTR
SUMO4Medium_conservedmiR-186chr6:1497219457-mer-m8113pUTR
SUMO4Medium_conservedmiR-186chr6:1497219687-mer-m803pUTR
SUMO4Medium_conservedmiR-340-5pchr6:1497221477-mer-m8113pUTR
SUMO4Medium_conservedmiR-346chr6:1497216418-mer9CDS
SUMO4Medium_conservedmiR-374abchr6:1497219757-mer-m8133pUTR
SUMO4Medium_conservedmiR-411chr6:1497218147-mer-m89CDS
SUMO4Medium_conservedmiR-494chr6:1497217907-mer-A17CDS
DNA & RNA Element - RAID2
Gene NameRAID IDInteractor 1Category 1ID 1Interactor 2Category 2ID 2MethodsScore
SUMO4RAID00157174hsa-miR-4657miRNAMIMAT0019724SUMO4mRNA387082Prediction0.1828
SUMO4RAID00186505hsa-miR-4491miRNAMIMAT0019026SUMO4mRNA387082Prediction0.1828
SUMO4RAID00552394hsa-miR-204-5pmiRNAMIMAT0000265SUMO4mRNA387082Prediction0.1828
SUMO4RAID00921695hsa-miR-625-5pmiRNAMIMAT0003294SUMO4mRNA387082Prediction0.1828
SUMO4RAID00931052hsa-miR-374b-5pmiRNAMIMAT0004955SUMO4mRNA387082Prediction0.2202
SUMO4RAID01009041hsa-mir-340miRNAMI0000802SUMO4mRNA387082Prediction0.1828
SUMO4RAID01160817hsa-miR-133bmiRNAMIMAT0000770SUMO4mRNA387082Prediction0.1828
SUMO4RAID01173094hsa-miR-211-5pmiRNAMIMAT0000268SUMO4mRNA387082Prediction0.1828
SUMO4RAID01277793hsa-miR-4261miRNAMIMAT0016890SUMO4mRNA387082Prediction0.1828
SUMO4RAID01555346hsa-miR-340-5pmiRNAMIMAT0004692SUMO4mRNA387082Prediction0.2202
SUMO4RAID01686662hsa-miR-20b-3pmiRNAMIMAT0004752SUMO4mRNA387082Prediction0.1828
SUMO4RAID01805925hsa-miR-491-5pmiRNAMIMAT0002807SUMO4mRNA387082Prediction0.1828
SUMO4RAID02429756hsa-miR-361-5pmiRNAMIMAT0000703SUMO4mRNA387082Prediction0.1828
SUMO4RAID02575354hsa-miR-6794-5pmiRNAMIMAT0027488SUMO4mRNA387082Prediction0.1828
SUMO4RAID02666132hsa-miR-133a-3pmiRNAMIMAT0000427SUMO4mRNA387082Prediction0.1828
SUMO4RAID02745533hsa-miR-186-5pmiRNAMIMAT0000456SUMO4mRNA387082Prediction0.2202
SUMO4RAID03669643hsa-miR-3976miRNAMIMAT0019361SUMO4mRNA387082Prediction0.1828
SUMO4RAID03691765hsa-miR-516b-5pmiRNAMIMAT0002859SUMO4mRNA387082Prediction0.1828
SUMO4RAID03804406hsa-miR-374a-5pmiRNAMIMAT0000727SUMO4mRNA387082Prediction0.2202
SUMO4RAID03817157hsa-miR-1261miRNAMIMAT0005913SUMO4mRNA387082Prediction0.1828
SUMO4RAID03909868hsa-miR-4716-3pmiRNAMIMAT0019827SUMO4mRNA387082Prediction0.1828
SUMO4RAID04040683hsa-miR-548e-5pmiRNAMIMAT0026736SUMO4mRNA387082Prediction0.1828