Mutation - TCGA |
Type | Chromosome | Start Position | End Position | Strand | Variant Classification | Variant Type | Reference Allele | Tumor_seq Allele 1 | Tumor_seq Allele 2 | Tumor Sample Barcode | Matched Norm Sample Barcode | Genome Change | cDNA Change | Codon Change | Protein Change |
BRCA | 4 | 1107207 | 1107207 | + | Silent | SNP | T | T | G | TCGA-BH-A1F5-01A-12D-A13L-09 | TCGA-BH-A1F5-11A-43D-A13O-09 | g.chr4:1107207T>G | c.46A>C | c.(46-48)Agg>Cgg | p.R16R |
CESC | 4 | 1084614 | 1084614 | + | Missense_Mutation | SNP | G | G | C | TCGA-EK-A2PG-01A-11D-A18J-09 | TCGA-EK-A2PG-10A-01D-A18J-09 | g.chr4:1084614G>C | c.259C>G | c.(259-261)Caa>Gaa | p.Q87E |
COAD | 4 | 1073448 | 1073449 | + | Frame_Shift_Del | DEL | GA | GA | - | TCGA-CM-4743-01A-01D-1719-10 | TCGA-CM-4743-10A-01D-1719-10 | g.chr4:1073448_1073449delGA | c.492_493delTC | c.(490-495)tctcctfs | p.P165fs |
COAD | 4 | 1073468 | 1073468 | + | Missense_Mutation | SNP | G | G | A | TCGA-AA-A010-01A-01W-A00E-09 | TCGA-AA-A010-10A-01W-A00E-09 | g.chr4:1073468G>A | c.473C>T | c.(472-474)tCg>tTg | p.S158L |
COAD | 4 | 1079711 | 1079711 | + | Nonsense_Mutation | SNP | G | G | T | TCGA-F4-6570-01A-11D-1771-10 | TCGA-F4-6570-10A-01D-1771-10 | g.chr4:1079711G>T | c.335C>A | c.(334-336)tCa>tAa | p.S112* |
COADREAD | 4 | 1073448 | 1073449 | + | Frame_Shift_Del | DEL | GA | GA | - | TCGA-CM-4743-01A-01D-1719-10 | TCGA-CM-4743-10A-01D-1719-10 | g.chr4:1073448_1073449delGA | c.492_493delTC | c.(490-495)tctcctfs | p.P165fs |
COADREAD | 4 | 1073468 | 1073468 | + | Missense_Mutation | SNP | G | G | A | TCGA-AA-A010-01A-01W-A00E-09 | TCGA-AA-A010-10A-01W-A00E-09 | g.chr4:1073468G>A | c.473C>T | c.(472-474)tCg>tTg | p.S158L |
COADREAD | 4 | 1075217 | 1075217 | + | Missense_Mutation | SNP | C | C | A | TCGA-AG-A011-01A-01W-A00K-09 | TCGA-AG-A011-10A-01W-A00K-09 | g.chr4:1075217C>A | c.454G>T | c.(454-456)Gcc>Tcc | p.A152S |
COADREAD | 4 | 1079711 | 1079711 | + | Nonsense_Mutation | SNP | G | G | T | TCGA-F4-6570-01A-11D-1771-10 | TCGA-F4-6570-10A-01D-1771-10 | g.chr4:1079711G>T | c.335C>A | c.(334-336)tCa>tAa | p.S112* |
KIPAN | 4 | 1066753 | 1066753 | + | Missense_Mutation | SNP | T | T | A | TCGA-5P-A9KC-01A-11D-A42J-10 | TCGA-5P-A9KC-10A-01D-A42M-10 | g.chr4:1066753T>A | c.803A>T | c.(802-804)cAg>cTg | p.Q268L |
KIPAN | 4 | 1075211 | 1075211 | + | Missense_Mutation | SNP | C | C | G | TCGA-B2-3924-01A-02D-1386-10 | TCGA-B2-3924-11A-01D-1251-10 | g.chr4:1075211C>G | c.460G>C | c.(460-462)Gac>Cac | p.D154H |
KIPAN | 4 | 1075245 | 1075245 | + | Silent | SNP | G | G | A | TCGA-BP-4159-01A-02D-1366-10 | TCGA-BP-4159-11A-01D-1366-10 | g.chr4:1075245G>A | c.426C>T | c.(424-426)caC>caT | p.H142H |
KIRC | 4 | 1075211 | 1075211 | + | Missense_Mutation | SNP | C | C | G | TCGA-B2-3924-01A-02D-1386-10 | TCGA-B2-3924-11A-01D-1251-10 | g.chr4:1075211C>G | c.460G>C | c.(460-462)Gac>Cac | p.D154H |
KIRC | 4 | 1075245 | 1075245 | + | Silent | SNP | G | G | A | TCGA-BP-4159-01A-02D-1366-10 | TCGA-BP-4159-11A-01D-1366-10 | g.chr4:1075245G>A | c.426C>T | c.(424-426)caC>caT | p.H142H |
KIRP | 4 | 1066753 | 1066753 | + | Missense_Mutation | SNP | T | T | A | TCGA-5P-A9KC-01A-11D-A42J-10 | TCGA-5P-A9KC-10A-01D-A42M-10 | g.chr4:1066753T>A | c.803A>T | c.(802-804)cAg>cTg | p.Q268L |
LIHC | 4 | 1084625 | 1084625 | + | Splice_Site | SNP | A | A | T | TCGA-LG-A6GG-01A-11D-A30V-10 | TCGA-LG-A6GG-10A-01D-A30V-10 | g.chr4:1084625A>T | c.248T>A | c.(247-249)aTt>aAt | p.I83N |
LIHC | 4 | 1107222 | 1107222 | + | Missense_Mutation | SNP | A | A | T | TCGA-DD-A4NV-01A-11D-A30V-10 | TCGA-DD-A4NV-10A-01D-A30V-10 | g.chr4:1107222A>T | c.31T>A | c.(31-33)Ttc>Atc | p.F11I |
LUAD | 4 | 1066813 | 1066813 | + | Missense_Mutation | SNP | G | G | A | TCGA-05-4390-01A-02D-1753-08 | TCGA-05-4390-10A-01D-1753-08 | g.chr4:1066813G>A | c.743C>T | c.(742-744)aCc>aTc | p.T248I |
LUAD | 4 | 1073435 | 1073435 | + | Missense_Mutation | SNP | C | C | A | TCGA-91-6829-01A-21D-1855-08 | TCGA-91-6829-11A-01D-1855-08 | g.chr4:1073435C>A | c.506G>T | c.(505-507)aGa>aTa | p.R169I |
LUAD | 4 | 1073450 | 1073450 | + | Missense_Mutation | SNP | G | G | C | TCGA-05-4398-01A-01D-1265-08 | TCGA-05-4398-10A-01D-1265-08 | g.chr4:1073450G>C | c.491C>G | c.(490-492)tCt>tGt | p.S164C |
LUAD | 4 | 1079701 | 1079701 | + | Missense_Mutation | SNP | C | C | G | TCGA-78-7155-01A-11D-2036-08 | TCGA-78-7155-10A-01D-2036-08 | g.chr4:1079701C>G | c.345G>C | c.(343-345)caG>caC | p.Q115H |
PAAD | 4 | 1066789 | 1066789 | + | Missense_Mutation | SNP | T | T | C | TCGA-IB-7651-01A-11D-2154-08 | TCGA-IB-7651-10A-01D-2154-08 | g.chr4:1066789T>C | c.767A>G | c.(766-768)tAt>tGt | p.Y256C |
PRAD | 4 | 1067393 | 1067393 | + | Nonsense_Mutation | SNP | G | G | A | TCGA-KK-A59V-01A-11D-A29Q-08 | TCGA-KK-A59V-11A-11D-A29Q-08 | g.chr4:1067393G>A | c.568C>T | c.(568-570)Cga>Tga | p.R190* |
PRAD | 4 | 1107206 | 1107206 | + | Missense_Mutation | SNP | C | C | A | TCGA-XK-AAIW-01A-11D-A41K-08 | TCGA-XK-AAIW-10A-01D-A41N-08 | g.chr4:1107206C>A | c.47G>T | c.(46-48)aGg>aTg | p.R16M |
READ | 4 | 1075217 | 1075217 | + | Missense_Mutation | SNP | C | C | A | TCGA-AG-A011-01A-01W-A00K-09 | TCGA-AG-A011-10A-01W-A00K-09 | g.chr4:1075217C>A | c.454G>T | c.(454-456)Gcc>Tcc | p.A152S |
SKCM | 4 | 1084575 | 1084575 | + | Missense_Mutation | SNP | C | C | T | TCGA-EE-A20F-06A-21D-A196-08 | TCGA-EE-A20F-10A-01D-A198-08 | g.chr4:1084575C>T | c.298G>A | c.(298-300)Gaa>Aaa | p.E100K |
SKCM | 4 | 1090587 | 1090587 | + | Missense_Mutation | SNP | C | C | T | TCGA-EE-A2GI-06A-11D-A196-08 | TCGA-EE-A2GI-10A-01D-A198-08 | g.chr4:1090587C>T | c.212G>A | c.(211-213)aGt>aAt | p.S71N |
SKCM | 4 | 1102144 | 1102144 | + | Missense_Mutation | SNP | A | A | G | TCGA-ER-A19P-06A-11D-A196-08 | TCGA-ER-A19P-10A-01D-A198-08 | g.chr4:1102144A>G | c.158T>C | c.(157-159)tTg>tCg | p.L53S |
SKCM | 4 | 1107151 | 1107151 | + | Silent | SNP | G | G | A | TCGA-EE-A3J3-06A-11D-A20D-08 | TCGA-EE-A3J3-10A-01D-A20D-08 | g.chr4:1107151G>A | c.102C>T | c.(100-102)ctC>ctT | p.L34L |