DNA & RNA Element - UTRdb Gene Name Type ASPicDB UTRaspic Refseq ID Genome RNF135 3'UTR ada04e522a BA091369 NM_032322 chr17:26350336-26351053:+ RNF135 3'UTR 82e40caeea BA091370 NM_032322 chr17:26349833-26351055:+ RNF135 3'UTR 48b5c79ed8 NM_032322 chr17:26350336-26350552:+ RNF135 3'UTR 6d7fbd4d44 NM_032322 chr17:26349833-26350552:+ RNF135 3'UTR 545e5884b9 NM_032322 chr17:26322713-26335905:+ RNF135 3'UTR c0c3f514f7 NM_032322 chr17:26339137-26339251:+ RNF135 3'UTR c3d43f4c1c NM_032322 chr17:26350336-26351055:+ RNF135 5'UTR ada04e522a CA143530 NM_032322 chr17:26322082-26322217:+ RNF135 5'UTR 82e40caeea CA143531 NM_032322 chr17:26322128-26322217:+ RNF135 5'UTR 56ac24c533 NM_032322 chr17:26322128-26322217:+ RNF135 5'UTR 31dc64b7bd NM_032322 chr17:26322211-26322217:+ RNF135 5'UTR 9fb9a18b65 NM_032322 chr17:26322082-26322217:+

DNA & RNA Element - circBase circRNA ID Chrom Start End Strand hsa_circ_0042876 chr17 29320857 29326929 + hsa_circ_0042877 chr17 29325679 29326929 + hsa_circ_0042875 chr17 29314961 29326929 + hsa_circ_0003488 chr17 29311634 29315124 + hsa_circ_0042874 chr17 29311634 29326929 +

DNA & RNA Element - circRNADb circRNA ID Chrom Start End Strand Samples hsa_circ_03608 chr17 29311634 29315124 + H9 hESCs,Hs68

DNA & RNA Element - CircNet Circ ID GITPosition Express Symbol Entrez Category Strand Refered Name hsa-circ-RNF135-overlap.2 NM_032322Tchr17:29311634-29311945 expressed RNF135 84282 protein-coding + not_available hsa-circ-RNF135.2 NM_001184992Tchr17:29320857-29326929 expressed RNF135 84282 protein-coding + hsa_circ_0042876 hsa-circ-RNF135.3 NM_001184992Tchr17:29325679-29326929 expressed RNF135 84282 protein-coding + hsa_circ_0042877 hsa-circ-RNF135.5 NM_001184992Tchr17:29311634-29326929 expressed RNF135 84282 protein-coding + hsa_circ_0042874 hsa-circ-RNF135.6 NM_032322Tchr17:29311634-29315124 none RNF135 84282 protein-coding + not_available hsa-circ-RNF135.7 NM_032322Tchr17:29314961-29315124 none RNF135 84282 protein-coding + not_available hsa-circ-RNF135.8 NM_001184992Tchr17:29314961-29326929 expressed RNF135 84282 protein-coding + hsa_circ_0042875

DNA & RNA Element - miRTarBase Target Gene (Entrez ID) miRTarBase ID miRNA Species (miRNA) Target Gene Species (Target Gene) Experiments Support Type References (PMID) MIRT145446 hsa-miR-30a-5p Homo sapiens RNF135 84282 Homo sapiens HITS-CLIP Functional MTI (Weak) 22473208 MIRT145448 hsa-miR-30c-5p Homo sapiens RNF135 84282 Homo sapiens HITS-CLIP Functional MTI (Weak) 22473208 MIRT145449 hsa-miR-30d-5p Homo sapiens RNF135 84282 Homo sapiens HITS-CLIP Functional MTI (Weak) 22473208 MIRT145450 hsa-miR-30b-5p Homo sapiens RNF135 84282 Homo sapiens HITS-CLIP Functional MTI (Weak) 22473208 MIRT145451 hsa-miR-30e-5p Homo sapiens RNF135 84282 Homo sapiens HITS-CLIP Functional MTI (Weak) 22473208 MIRT642850 hsa-miR-921 Homo sapiens RNF135 84282 Homo sapiens HITS-CLIP Functional MTI (Weak) 23824327 MIRT642851 hsa-miR-661 Homo sapiens RNF135 84282 Homo sapiens HITS-CLIP Functional MTI (Weak) 23824327 MIRT642852 hsa-miR-6860 Homo sapiens RNF135 84282 Homo sapiens HITS-CLIP Functional MTI (Weak) 23824327 MIRT642853 hsa-miR-612 Homo sapiens RNF135 84282 Homo sapiens HITS-CLIP Functional MTI (Weak) 23824327 MIRT642854 hsa-miR-5189-5p Homo sapiens RNF135 84282 Homo sapiens HITS-CLIP Functional MTI (Weak) 23824327 MIRT642855 hsa-miR-3187-5p Homo sapiens RNF135 84282 Homo sapiens HITS-CLIP Functional MTI (Weak) 23824327 MIRT642856 hsa-miR-1285-3p Homo sapiens RNF135 84282 Homo sapiens HITS-CLIP Functional MTI (Weak) 23824327 MIRT642857 hsa-miR-939-3p Homo sapiens RNF135 84282 Homo sapiens HITS-CLIP Functional MTI (Weak) 23824327 MIRT642858 hsa-miR-6849-3p Homo sapiens RNF135 84282 Homo sapiens HITS-CLIP Functional MTI (Weak) 23824327 MIRT642859 hsa-miR-1226-3p Homo sapiens RNF135 84282 Homo sapiens HITS-CLIP Functional MTI (Weak) 23824327 MIRT642860 hsa-miR-4714-3p Homo sapiens RNF135 84282 Homo sapiens HITS-CLIP Functional MTI (Weak) 23824327 MIRT642861 hsa-miR-3174 Homo sapiens RNF135 84282 Homo sapiens HITS-CLIP Functional MTI (Weak) 23824327

DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0004483 hsa-let-7c* 84282 RNF135 auUGAGGGUCCCACAUU-GAGAu :||||::|| ||| |||| ugGCUCCUGGGAGAUAACCUCUa 2 21 320 342 [hg19:17:29326529-29326551:+] 0.6086 128 0 -22.44 -0.7427 MIMAT0004483 hsa-let-7c* 84282 RNF135 auUGAGGGUCCCACAUU-GAGAu :||||::|| ||| |||| ugGCUCCUGGGAGAUAACCUCUa 2 21 823 845 [hg19:17:29326529-29326551:+] 0.6086 128 0 -22.44 -0.6292 MIMAT0004487 hsa-let-7f-2* 84282 RNF135 ccuuuCUGUCAUCUGACAUAuc ||: || |||||| uugcuGAUUUUAAUCUGUAUcc 3 18 664 685 [hg19:17:29326873-29326894:+] 0.5761 129 0 -7.46 -0.1363 MIMAT0004487 hsa-let-7f-2* 84282 RNF135 ccuuuCUGUCAUCUGACAUAuc ||: || |||||| uugcuGAUUUUAAUCUGUAUcc 3 18 1167 1188 [hg19:17:29326873-29326894:+] 0.5761 129 0 -7.46 -0.1009 MIMAT0004499 hsa-miR-26a-1* 84282 RNF135 gcacguucaUUGGUUCUUAUCc ||: |||||||| gacauuccaAAUAAAGAAUAGg 2 14 290 311 [hg19:17:29326499-29326520:+] 0.6086 153 7 -13.66 -0.1821 MIMAT0004499 hsa-miR-26a-1* 84282 RNF135 gcacguucaUUGGUUCUUAUCc ||: |||||||| gacauuccaAAUAAAGAAUAGg 2 14 793 814 [hg19:17:29326499-29326520:+] 0.6086 153 7 -13.66 -0.1350 MIMAT0004509 hsa-miR-93* 84282 RNF135 gcCCUU---CACG-AUCGAGUC-GUCa |||| || | |:|||||| ||| aaGGAAACUGUCCUUGGCUCAGACAGa 2 21 294 320 [hg19:17:29326000-29326026:+] 0.7316 126 0 -20.25 -0.1993 MIMAT0004517 hsa-miR-106a* 84282 RNF135 cauucuucACGAAUGUAACGuc | ||| |||||| augugccuUUCUU-CAUUGCug 3 15 649 669 [hg19:17:29326858-29326878:+] 0.5646 128 0 -12.27 -0.1200 MIMAT0000251 hsa-miR-147 84282 RNF135 cgucuUCGUAA-A--GGUGUGUg | |||| | ||||||| cacacAUCAUUGUAGCCACACAu 2 16 548 570 [hg19:17:29326757-29326779:+] 0.5612 145 7 -16.18 -0.5679 MIMAT0000251 hsa-miR-147 84282 RNF135 cgucuUCGUAA-A--GGUGUGUg | |||| | ||||||| cacacAUCAUUGUAGCCACACAu 2 16 1051 1073 [hg19:17:29326757-29326779:+] 0.5612 145 7 -16.18 -0.4623 MIMAT0004557 hsa-miR-34a* 84282 RNF135 ucCCGUCAUAUG-AACGACUAAc | | | | | ||||||||| guGCCUUUCUUCAUUGCUGAUUu 2 21 651 673 [hg19:17:29326860-29326882:+] 0.5761 151 7 -10.45 -1.2080 MIMAT0004557 hsa-miR-34a* 84282 RNF135 ucCCGUCAUAUG-AACGACUAAc | | | | | ||||||||| guGCCUUUCUUCAUUGCUGAUUu 2 21 1154 1176 [hg19:17:29326860-29326882:+] 0.5761 151 7 -10.45 -1.1552 MIMAT0004558 hsa-miR-181a-2* 84282 RNF135 ccAUGUCAGUUGCCAGUCACCa |:| || |: ||||||| cuUGCCUUCUAU--UCAGUGGa 2 21 363 382 [hg19:17:29326069-29326088:+] 0.7192 145 7 -12.38 -1.0798 MIMAT0004561 hsa-miR-187* 84282 RNF135 cgggcccaggacacAACAUCGg ||||||| cugugcacacaucaUUGUAGCc 2 9 543 564 [hg19:17:29326752-29326773:+] 0.5612 140 7 -16.06 -0.6509 MIMAT0004561 hsa-miR-187* 84282 RNF135 cgggcccaggacacAACAUCGg ||||||| cugugcacacaucaUUGUAGCc 2 9 1046 1067 [hg19:17:29326752-29326773:+] 0.5612 140 7 -16.06 -0.5403 MIMAT0004568 hsa-miR-221* 84282 RNF135 uuUA-GAUGUAACAUACGGUCCa || ||: | | ||||||| uuAUCCUGAAGACUCUGCCAGGa 2 21 592 614 [hg19:17:29326801-29326823:+] 0.5612 147 7 -14.86 -0.7142 MIMAT0004568 hsa-miR-221* 84282 RNF135 uuUA-GAUGUAACAUACGGUCCa || ||: | | ||||||| uuAUCCUGAAGACUCUGCCAGGa 2 21 1095 1117 [hg19:17:29326801-29326823:+] 0.5612 147 7 -14.86 -0.6019 MIMAT0004589 hsa-miR-30b* 84282 RNF135 cuucauuUGUAGGUGGAGGGUc || || :||||||| uccucccACCUCAGCCUCCCAa 2 16 163 184 [hg19:17:29326372-29326393:+] 0.4986 155 7 -16.01 -0.2103 MIMAT0004589 hsa-miR-30b* 84282 RNF135 cuucaUUUGUAGGUGGAGGGUc ||:|| : ||||||| gucucAAGCAGU--CCUCCCAc 2 18 152 171 [hg19:17:29326361-29326380:+] 0.4986 146 7 -17.14 -0.2588 MIMAT0004589 hsa-miR-30b* 84282 RNF135 cuucauuUGUAGGUGGAGGGUc || || :||||||| uccucccACCUCAGCCUCCCAa 2 16 666 687 [hg19:17:29326372-29326393:+] 0.4986 155 7 -16.01 -0.1542 MIMAT0004589 hsa-miR-30b* 84282 RNF135 cuucaUUUGUAGGUGGAGGGUc ||:|| : ||||||| gucucAAGCAGU--CCUCCCAc 2 18 655 674 [hg19:17:29326361-29326380:+] 0.4986 146 7 -17.14 -0.1916 MIMAT0004593 hsa-miR-130a* 84282 RNF135 cgUCUGUCA--UCGU---GUUACACUu :|:|||| |||| |||||||| guGGGCAGUGAAGCAUGCCAAUGUGAu 2 21 455 481 [hg19:17:29326664-29326690:+] 0.5415 162 7 -23.19 -0.1728 MIMAT0004593 hsa-miR-130a* 84282 RNF135 cgUCUGUCA--UCGU---GUUACACUu :|:|||| |||| |||||||| guGGGCAGUGAAGCAUGCCAAUGUGAu 2 21 958 984 [hg19:17:29326664-29326690:+] 0.5415 162 7 -23.19 -0.1288 MIMAT0004610 hsa-miR-150* 84282 RNF135 gacAGGGGGUCCGGACAUGGUc |:|: :| | ||||||| agcUUCUGUAUGAGUGUACCAu 2 20 394 415 [hg19:17:29326100-29326121:+] 0.7067 151 7 -14.42 -0.3940 MIMAT0000457 hsa-miR-188-5p 84282 RNF135 gggaggugguacGUUCCCUAc :||||||| -----gguuuccUAAGGGAUu 2 10 1 16 [hg19:17:29326210-29326225:+] 0.6339 141 7 -14.01 -0.3764 MIMAT0000457 hsa-miR-188-5p 84282 RNF135 gggaggugguacGUUCCCUAc :||||||| uguaagguuuccUAAGGGAUu 2 10 499 519 [hg19:17:29326205-29326225:+] 0.6339 141 7 -14.01 -0.6762 MIMAT0004681 hsa-miR-26a-2* 84282 RNF135 cuuuguucaUUAGUUCUUAUCc ||| |||||||| gacauuccaAAUAAAGAAUAGg 2 14 290 311 [hg19:17:29326499-29326520:+] 0.6086 157 7 -14.17 -0.1821 MIMAT0004681 hsa-miR-26a-2* 84282 RNF135 cuuuguucaUUAGUUCUUAUCc ||| |||||||| gacauuccaAAUAAAGAAUAGg 2 14 793 814 [hg19:17:29326499-29326520:+] 0.6086 157 7 -14.17 -0.1350 MIMAT0000705 hsa-miR-362-5p 84282 RNF135 ugaGUGU-GGA--UCCA-AGGUUCCUAa ::|| ||| |||| ||||||||| uccUGCAGCCUGGAGGUGUCCAAGGAUu 2 22 9 36 [hg19:17:29325715-29325742:+] 0.6883 166 7 -27.67 -0.1124 MIMAT0004688 hsa-miR-374a* 84282 RNF135 uuAAUGUUAUGUUA--GACUAUUc ||| ||||: | ||||||| caUUAGAAUAUCUUGCCUGAUAAg 2 21 346 369 [hg19:17:29326555-29326578:+] 0.6086 159 7 -15.21 -0.4220 MIMAT0004688 hsa-miR-374a* 84282 RNF135 uuAAUGUUAUGUUA--GACUAUUc ||| ||||: | ||||||| caUUAGAAUAUCUUGCCUGAUAAg 2 21 849 872 [hg19:17:29326555-29326578:+] 0.6086 159 7 -15.21 -0.3323 MIMAT0004688 hsa-miR-374a* 84282 RNF135 uuaAUGUUAUGUUAGACUAUUc |: || |: | ||||||| uccUGGAA-AUUACCUGAUAAu 2 20 464 484 [hg19:17:29326170-29326190:+] 0.7067 149 7 -7.70 -0.9401 MIMAT0004748 hsa-miR-423-5p 84282 RNF135 uuUCAGA-GCGAGAGACGG-GGAGu ||| | | |||||||| |||| ugAGUGUACCAUCUCUGCCUCCUCu 2 22 404 428 [hg19:17:29326110-29326134:+] 0.7067 136 0 -26.53 -0.5176 MIMAT0004757 hsa-miR-431* 84282 RNF135 ucuucGGGAC--GUUCUG-CUGGAc ||:|| : |||| ||||| acuguCCUUGGCUCAGACAGACCUg 2 18 300 324 [hg19:17:29326006-29326030:+] 0.7316 120 0 -24.44 -0.2243 MIMAT0002176 hsa-miR-485-3p 84282 RNF135 ucucUCCUC-UCG-GCACAUACUg ||||| ||| : ||||||| aaucAGGAGAAGCUUCUGUAUGAg 2 19 384 407 [hg19:17:29326090-29326113:+] 0.7067 160 7 -19.73 -0.2274 MIMAT0002810 hsa-miR-202* 84282 RNF135 guUUCUUCAUAUACGU-AUCCUu ::|||||: | || ||||| cuGGGAAGUGGA--CACUAGGAa 2 21 146 166 [hg19:17:29325852-29325872:+] 0.7423 121 0 -16.39 -0.6883 MIMAT0002812 hsa-miR-492 84282 RNF135 uuCUUAGAACAGGGC--GUCCAGGa ||: : | | || ||||||| ggGAGAUGAGCCGCGACCAGGUCCu 2 22 199 223 [hg19:17:29325905-29325929:+] 0.7481 144 7 -22.27 -0.1903 MIMAT0004768 hsa-miR-497* 84282 RNF135 agAUUGUGGUGUCACACCAAAc | ||| |||| ||||||| gaUUACAACACA--GUGGUUUc 2 21 516 535 [hg19:17:29326222-29326241:+] 0.5612 161 7 -14.66 -0.2169 MIMAT0002836 hsa-miR-526b* 84282 RNF135 cggaGAUUUUCCUUCGUGAAAg || ||: | |||||| uugaCUUAAGAAUACCACUUUu 2 19 69 90 [hg19:17:29326278-29326299:+] 0.5265 122 6 -8.16 -0.1272 MIMAT0002849 hsa-miR-524-5p 84282 RNF135 cucuuucACGAAGGGAAACAUc | || :|||||||| cucugccUCCUCUCCUUUGUAc 2 16 416 437 [hg19:17:29326122-29326143:+] 0.7067 155 7 -12.97 -0.2166 MIMAT0002855 hsa-miR-520d-5p 84282 RNF135 cuuucccGAAGGGAAACAUc || :|||||||| cugccucCUCUCCUUUGUAc 2 14 418 437 [hg19:17:29326124-29326143:+] 0.7067 153 7 -12.97 -0.2206 MIMAT0002873 hsa-miR-502-5p 84282 RNF135 auCGUG-GGUCUAUC-GUUCCUa |||: || ||:| |||||| cuGCAUGGCACAUGGUCAAGGAa 2 20 277 299 [hg19:17:29325983-29326005:+] 0.7316 126 6 -17.16 -0.6212 MIMAT0004776 hsa-miR-505* 84282 RNF135 uguaguuauGAAGGACCGAGGg || ||||||||| aauaggcccCUGCCUGGCUCCu 2 14 306 327 [hg19:17:29326515-29326536:+] 0.6086 157 7 -22.49 -0.1518 MIMAT0004776 hsa-miR-505* 84282 RNF135 uguaguuauGAAGGACCGAGGg || ||||||||| aauaggcccCUGCCUGGCUCCu 2 14 809 830 [hg19:17:29326515-29326536:+] 0.6086 157 7 -22.49 -0.1121 MIMAT0003165 hsa-miR-545 84282 RNF135 cguguguuauuuacaAACGACu |||||| augugccuuucuucaUUGCUGa 2 8 649 670 [hg19:17:29326858-29326879:+] 0.5761 120 6 -9.92 -0.1588 MIMAT0003165 hsa-miR-545 84282 RNF135 cguguguuauuuacaAACGACu |||||| augugccuuucuucaUUGCUGa 2 8 1152 1173 [hg19:17:29326858-29326879:+] 0.5761 120 6 -9.92 -0.1181 MIMAT0003217 hsa-miR-554 84282 RNF135 ugACC-GACUCAGUCCUGAUCg ||| ||: :||||||| ugUGGAAUGGAAGGGGACUAGc 2 20 248 269 [hg19:17:29325954-29325975:+] 0.7481 146 7 -20.82 -0.1048 MIMAT0004793 hsa-miR-556-3p 84282 RNF135 uuUCUACUCGAU------UACCAUUAUa :|:||||||| |||||||| auGGGUGAGCUACUCUGGUUGGUAAUAc 2 21 514 541 [hg19:17:29326723-29326750:+] 0.5612 155 7 -20.85 -0.4248 MIMAT0004793 hsa-miR-556-3p 84282 RNF135 uuucuacucgauuacCAUUAUa |||||| cuguauccuuucacuGUAAUAa 2 8 678 699 [hg19:17:29326887-29326908:+] 0.5877 120 6 -2.50 -0.1274 MIMAT0004793 hsa-miR-556-3p 84282 RNF135 uuUCUACUCGAU------UACCAUUAUa :|:||||||| |||||||| auGGGUGAGCUACUCUGGUUGGUAAUAc 2 21 1017 1044 [hg19:17:29326723-29326750:+] 0.5612 155 7 -20.85 -0.3347 MIMAT0003225 hsa-miR-561 84282 RNF135 ugAAGUUCCUAGAAUUUGAAAc |||| | | |||||| | cuUUCACUG-UAAUAAACUGUa 2 21 685 705 [hg19:17:29326894-29326914:+] 0.5877 122 0 -5.99 -0.1013 MIMAT0004795 hsa-miR-574-5p 84282 RNF135 ugUGUG-AGU-GUGUGUGUGUG-AGu |||| ||| :::| ||||| || gcACACAUCAUUGUAGCCACACAUCa 2 22 547 572 [hg19:17:29326756-29326781:+] 0.5612 123 0 -22.98 -0.7436 MIMAT0004795 hsa-miR-574-5p 84282 RNF135 ugUGUG-AGU-GUGUGUGUGUG-AGu |||| ||| :::| ||||| || gcACACAUCAUUGUAGCCACACAUCa 2 22 1050 1075 [hg19:17:29326756-29326781:+] 0.5612 123 0 -22.98 -0.6311 MIMAT0003241 hsa-miR-576-5p 84282 RNF135 uuucugcaccUCUUUAAUCUUa || ||||||| auaaccucuaAGCCAUUAGAAu 2 13 333 354 [hg19:17:29326542-29326563:+] 0.6086 144 7 -7.19 -0.4011 MIMAT0003241 hsa-miR-576-5p 84282 RNF135 uuucugcaccucuuuAAUCUUa |||||| uaagaauaccacuuuUUAGAAa 2 8 75 96 [hg19:17:29326284-29326305:+] 0.5125 120 6 -6.15 -0.1657 MIMAT0003241 hsa-miR-576-5p 84282 RNF135 uuucugcaccUCUUUAAUCUUa || ||||||| auaaccucuaAGCCAUUAGAAu 2 13 836 857 [hg19:17:29326542-29326563:+] 0.6086 144 7 -7.19 -0.3141 MIMAT0003241 hsa-miR-576-5p 84282 RNF135 uuucugcaccucuuuAAUCUUa |||||| uaagaauaccacuuuUUAGAAa 2 8 578 599 [hg19:17:29326284-29326305:+] 0.5125 120 6 -6.15 -0.1191 MIMAT0003247 hsa-miR-582-5p 84282 RNF135 ucAUUGACCAACUUGUUGACAUu | |||| | | ||||||| uuUCACUG--UAAUAAACUGUAa 2 22 686 706 [hg19:17:29326895-29326915:+] 0.5877 150 7 -12.62 -1.2896 MIMAT0003247 hsa-miR-582-5p 84282 RNF135 ucAUUGACCAACUUGUUGACAUu | |||| | | ||||||| uuUCACUG--UAAUAAACUGUAa 2 22 1189 1209 [hg19:17:29326895-29326915:+] 0.5877 150 7 -12.62 -1.2613 MIMAT0004800 hsa-miR-550 84282 RNF135 cccgagaaUGAGGGA-GU-CCGUGa :|||:|| || ||||| acuagccaGCUCUCUGCAUGGCACa 2 16 264 288 [hg19:17:29325970-29325994:+] 0.7399 122 0 -20.01 -0.4933 MIMAT0003259 hsa-miR-591 84282 RNF135 uguuAC-UCUUGGGUACCAGa || | ::| ||||||| ucucUGCAUGGCACAUGGUCa 2 17 274 294 [hg19:17:29325980-29326000:+] 0.7316 147 7 -13.10 -0.4071 MIMAT0003268 hsa-miR-600 84282 RNF135 cucguuccGAGAACAGACAUUca | :|| |||||| aucuguauCCUUUCACUGUAAua 3 16 676 698 [hg19:17:29326885-29326907:+] 0.5877 127 0 -8.44 -0.1827 MIMAT0003268 hsa-miR-600 84282 RNF135 cucguuccgAGAACAGAC-AUUCa ||||| ||| |||| auuagaauaUCUUGCCUGAUAAGa 2 15 347 370 [hg19:17:29326556-29326579:+] 0.6086 126 0 -13.12 -0.7361 MIMAT0003268 hsa-miR-600 84282 RNF135 cucguuccGAGAACAGACAUUca | :|| |||||| aucuguauCCUUUCACUGUAAua 3 16 1179 1201 [hg19:17:29326885-29326907:+] 0.5877 127 0 -8.44 -0.1366 MIMAT0003268 hsa-miR-600 84282 RNF135 cucguuccgAGAACAGAC-AUUCa ||||| ||| |||| auuagaauaUCUUGCCUGAUAAGa 2 15 850 873 [hg19:17:29326556-29326579:+] 0.6086 126 0 -13.12 -0.6236 MIMAT0003280 hsa-miR-612 84282 RNF135 uuCCUCGAGUCUUCGGGACGGGUCg ||| |||| || :||||||| ugGGAUCUCACUAG-GUUGCCCAGg 2 24 111 134 [hg19:17:29326320-29326343:+] 0.4986 165 7 -26.73 -0.1055 MIMAT0003298 hsa-miR-629* 84282 RNF135 cgacccgaauGCAACCCUCUUg :| |||||||| cacacaucauUGCUGGGAGAAu 2 13 564 585 [hg19:17:29326773-29326794:+] 0.5612 148 7 -14.99 -0.8808 MIMAT0003298 hsa-miR-629* 84282 RNF135 cgacccgaauGCAACCCUCUUg :| |||||||| cacacaucauUGCUGGGAGAAu 2 13 1067 1088 [hg19:17:29326773-29326794:+] 0.5612 148 7 -14.99 -0.7732 MIMAT0003299 hsa-miR-630 84282 RNF135 uggaagGGACCAUGUCUUAUGa ||||| ||||||| accacaCCUGGCCAAGAAUACc 2 17 210 231 [hg19:17:29326419-29326440:+] 0.5137 156 7 -22.02 -0.3605 MIMAT0003299 hsa-miR-630 84282 RNF135 ugGAAGGGACCAUGUCUUAUGa ||| || || ||||||| aaCUUGACU--UA-AGAAUACc 2 21 66 84 [hg19:17:29326275-29326293:+] 0.5265 147 7 -12.00 -0.7638 MIMAT0003299 hsa-miR-630 84282 RNF135 uggaagGGACCAUGUCUUAUGa ||||| ||||||| accacaCCUGGCCAAGAAUACc 2 17 713 734 [hg19:17:29326419-29326440:+] 0.5137 156 7 -22.02 -0.2755 MIMAT0003299 hsa-miR-630 84282 RNF135 ugGAAGGGACCAUGUCUUAUGa ||| || || ||||||| aaCUUGACU--UA-AGAAUACc 2 21 569 587 [hg19:17:29326275-29326293:+] 0.5265 147 7 -12.00 -0.6381 MIMAT0003300 hsa-miR-631 84282 RNF135 cgACUCCAGACCCGGUCCAGa ||| | | | ||||||| gaUGA-GCCGCGACCAGGUCc 2 20 203 222 [hg19:17:29325909-29325928:+] 0.7481 149 7 -17.77 -0.2034 MIMAT0003300 hsa-miR-631 84282 RNF135 cgacuccagaccCGGUCCAGa |||||||| gguuuucuaccaGCCAGGUCu 2 10 91 111 [hg19:17:29325797-29325817:+] 0.7365 145 7 -19.35 -0.8230 MIMAT0003314 hsa-miR-644 84282 RNF135 cgagauucuuUCGGUGUGa |||||||| acaucauuguAGCCACACa 2 10 551 569 [hg19:17:29326760-29326778:+] 0.5612 145 7 -13.69 -1.1452 MIMAT0003314 hsa-miR-644 84282 RNF135 cgagauucuuUCGGUGUGa |||||||| acaucauuguAGCCACACa 2 10 1054 1072 [hg19:17:29326760-29326778:+] 0.5612 145 7 -13.69 -1.0767 MIMAT0003317 hsa-miR-647 84282 RNF135 cuUCCUUCACUCACGU-CGGUg :|| ||||| ||| |||| guGGGCAGUGA-AGCAUGCCAa 2 20 455 475 [hg19:17:29326664-29326684:+] 0.5415 125 0 -18.95 -0.4982 MIMAT0003317 hsa-miR-647 84282 RNF135 cuuccuUCACUCACGUCGGUg || | |||||||| gacacuAGGAAUUGCAGCCAc 2 16 156 176 [hg19:17:29325862-29325882:+] 0.7423 151 7 -21.14 -0.3970 MIMAT0003317 hsa-miR-647 84282 RNF135 cuUCCUUCACUCACGU-CGGUg :|| ||||| ||| |||| guGGGCAGUGA-AGCAUGCCAa 2 20 958 978 [hg19:17:29326664-29326684:+] 0.5415 125 0 -18.95 -0.3991 MIMAT0003320 hsa-miR-650 84282 RNF135 caggacucUCGCGACGGAGGa | | |||||||| aguguaccAUCUCUGCCUCCu 2 14 406 426 [hg19:17:29326112-29326132:+] 0.7067 149 7 -18.49 -0.5936 MIMAT0003324 hsa-miR-661 84282 RNF135 ugcgcguccGGUCU-CUGGGUCCGu |:||: :||||||| gggaucucaCUAGGUUGCCCAGGCu 2 16 112 136 [hg19:17:29326321-29326345:+] 0.4986 146 7 -21.84 -0.2021 MIMAT0003324 hsa-miR-661 84282 RNF135 ugCGCGUCCGG--UCUCUGGGUCCGu || ||||:| | : ||||||| caGC-CAGGUCUUAUGUUCCCAGGCc 2 23 101 125 [hg19:17:29325807-29325831:+] 0.7365 151 7 -27.36 -0.8486 MIMAT0003324 hsa-miR-661 84282 RNF135 ugcgcguccGGUCU-CUGGGUCCGu |:||: :||||||| gggaucucaCUAGGUUGCCCAGGCu 2 16 615 639 [hg19:17:29326321-29326345:+] 0.4986 146 7 -21.84 -0.1469 MIMAT0003880 hsa-miR-671-5p 84282 RNF135 gaGGUCGGGGAGGUC--CCGAAGGa |::| | |: :| ||||||| caCUGGGCAGUUGGGGUGGCUUCCu 2 22 174 198 [hg19:17:29325880-29325904:+] 0.7481 144 7 -21.71 -0.1747 MIMAT0003882 hsa-miR-767-5p 84282 RNF135 guacgagucUGUUGGUAC-CACGu ::|||:||| |||| uaauaaacuGUAACUAUGAGUGC- 2 15 694 716 [hg19:17:29326903-29326925:+] 0.5877 122 0 -13.98 -1.1215 MIMAT0003882 hsa-miR-767-5p 84282 RNF135 guacgagucUGUUGGUAC-CACGu ::|||:||| |||| uaauaaacuGUAACUAUGAGUGC- 2 15 1197 1219 [hg19:17:29326903-29326925:+] 0.5877 122 0 -13.98 -1.0478 MIMAT0003888 hsa-miR-766 84282 RNF135 cgacuccgacacccCGACCUCa ||||||| cccacaacccuaucGCUGGAGc 2 9 62 83 [hg19:17:29325768-29325789:+] 0.6660 140 7 -12.12 -0.2039 MIMAT0003945 hsa-miR-765 84282 RNF135 guagugGAAGGA--AGAG-GAGGu :||||| |||| |||| caguggUUUCCUGGUCUCUCUCCc 2 16 23 46 [hg19:17:29326232-29326255:+] 0.5438 122 0 -19.51 -0.1304 MIMAT0003945 hsa-miR-765 84282 RNF135 guagugGAAGGA--AGAG-GAGGu :||||| |||| |||| caguggUUUCCUGGUCUCUCUCCc 2 16 526 549 [hg19:17:29326232-29326255:+] 0.5438 122 0 -19.51 -0.2348 MIMAT0004901 hsa-miR-298 84282 RNF135 accCUCUUGGAGGGACGA-AGACGa |:|:||: || ||| ||||| gaaGGGGACUAGCCAGCUCUCUGCa 2 22 257 281 [hg19:17:29325963-29325987:+] 0.7399 133 0 -21.03 -0.4630 MIMAT0004907 hsa-miR-892a 84282 RNF135 gaugcgucuuuccUGUGUCAc ||||||| cuaagggauuacaACACAGUg 2 9 510 530 [hg19:17:29326216-29326236:+] 0.5612 140 7 -15.85 -0.1262 MIMAT0004919 hsa-miR-541* 84282 RNF135 ucacccuGGCUGUCGUCUUAGGAAa ::|| ||: ||||||| accacuuUUGA-AGU-UAAUCCUUu 2 19 229 251 [hg19:17:29326438-29326460:+] 0.5287 142 7 -11.61 -0.8295 MIMAT0004919 hsa-miR-541* 84282 RNF135 ucacccuGGCUGUCGUCUUAGGAAa ::|| ||: ||||||| accacuuUUGA-AGU-UAAUCCUUu 2 19 732 754 [hg19:17:29326438-29326460:+] 0.5287 142 7 -11.61 -0.7130 MIMAT0004952 hsa-miR-665 84282 RNF135 ucccCGGAGUCGGAGGACCa |||| | ||||||| cccuGCCU--GGCUCCUGGg 2 17 313 330 [hg19:17:29326522-29326539:+] 0.6086 149 7 -20.27 -0.1855 MIMAT0004952 hsa-miR-665 84282 RNF135 ucccCGGAGUCGGAGGACCa |||| | ||||||| cccuGCCU--GGCUCCUGGg 2 17 816 833 [hg19:17:29326522-29326539:+] 0.6086 149 7 -20.27 -0.1381 MIMAT0004970 hsa-miR-920 84282 RNF135 auGACGAAGGUGUC-GAGGGg || | || ||| ||||| ucCUCCCACCUCAGCCUCCCa 2 19 163 183 [hg19:17:29326372-29326392:+] 0.4986 122 0 -19.51 -0.3496 MIMAT0004970 hsa-miR-920 84282 RNF135 auGACGAAGGUGUC-GAGGGg || | || ||| ||||| ucCUCCCACCUCAGCCUCCCa 2 19 666 686 [hg19:17:29326372-29326392:+] 0.4986 122 0 -19.51 -0.2649 MIMAT0004971 hsa-miR-921 84282 RNF135 cuuaggaccaagacagGGAGUGAUc :||||||| uacgauagagaugggaUCUCACUAg 2 10 100 124 [hg19:17:29326309-29326333:+] 0.4986 141 7 -20.03 -0.3302 MIMAT0004971 hsa-miR-921 84282 RNF135 cuuaggaccaagacagGGAGUGAUc :||||||| uacgauagagaugggaUCUCACUAg 2 10 603 627 [hg19:17:29326309-29326333:+] 0.4986 141 7 -20.03 -0.2471 MIMAT0004972 hsa-miR-922 84282 RNF135 cugcAUCAGGAUAAGAGACG-ACg ||| || : ||||||| || ggacUAG-CCAGCUCUCUGCAUGg 2 20 262 284 [hg19:17:29325968-29325990:+] 0.7399 125 0 -20.36 -0.1919 MIMAT0004974 hsa-miR-924 84282 RNF135 cgUUC-U-GUAGUG-UUCUGAGa ||| | :||| : ||||||| uuAAGCAUUAUCCUGAAGACUCu 2 19 585 607 [hg19:17:29326794-29326816:+] 0.5612 147 7 -17.01 -0.1962 MIMAT0004974 hsa-miR-924 84282 RNF135 cgUUC-U-GUAGUG-UUCUGAGa ||| | :||| : ||||||| uuAAGCAUUAUCCUGAAGACUCu 2 19 1088 1110 [hg19:17:29326794-29326816:+] 0.5612 147 7 -17.01 -0.1470 MIMAT0004983 hsa-miR-940 84282 RNF135 ccccucgccCCCGGGACGGAa || |||||||| uaaagaauaGGCCCCUGCCUg 2 13 301 321 [hg19:17:29326510-29326530:+] 0.6086 152 7 -19.93 -0.1039 MIMAT0004983 hsa-miR-940 84282 RNF135 ccccucgcccccGGGACGGAa |||||||| cucuccuuuguaCCCUGCCUu 2 10 425 445 [hg19:17:29326131-29326151:+] 0.7067 145 7 -18.53 -0.5827 MIMAT0005823 hsa-miR-1178 84282 RNF135 gaucccuuCUUGUCAC-UCGUu |::||||| |||| agccauguGGGCAGUGAAGCAu 2 14 449 470 [hg19:17:29326658-29326679:+] 0.5415 121 0 -15.81 -0.1519 MIMAT0005823 hsa-miR-1178 84282 RNF135 gaucccuuCUUGUCAC-UCGUu |::||||| |||| agccauguGGGCAGUGAAGCAu 2 14 952 973 [hg19:17:29326658-29326679:+] 0.5415 121 0 -15.81 -0.1127 MIMAT0005577 hsa-miR-1226 84282 RNF135 gaUCCCUUGUGUCCCGACCACu ||| :| || |||||||| cuAGGUUGCCCA-GGCUGGUGu 2 21 121 141 [hg19:17:29326330-29326350:+] 0.4986 158 7 -26.82 -0.1196 MIMAT0005582 hsa-miR-1228* 84282 RNF135 gugugUGG-ACGGG--GGCGGGUg ||: ||:|: ||||||| cagugACUGUGUCUCACCGCCCAc 2 17 43 66 [hg19:17:29325749-29325772:+] 0.6660 146 7 -25.41 -0.6125 MIMAT0005583 hsa-miR-1228 84282 RNF135 ccCCCCGCUCC----GUCCACACu || || :|| |||||||| aaGGUGCUGGGAUUACAGGUGUGa 2 19 183 206 [hg19:17:29326392-29326415:+] 0.4986 149 7 -23.70 -0.1049 MIMAT0005869 hsa-miR-1205 84282 RNF135 gagUUUCGUUUGGGACGUCu |:||| :||||||| ---AGAGCCUUUCCUGCAGc 2 18 1 17 [hg19:17:29325707-29325723:+] 0.6883 153 7 -19.08 -0.4056 MIMAT0005871 hsa-miR-1207-5p 84282 RNF135 ggggaggGUCGGAGGGACGGu :|| | ||||||| uaaagaaUAGGC-CCCUGCCu 2 15 301 320 [hg19:17:29326510-29326529:+] 0.6086 144 7 -19.57 -0.2475 MIMAT0005871 hsa-miR-1207-5p 84282 RNF135 ggGGAGGGUCGGAGGGACGGu :||||: : ||||||| ccUCUCCUUUGUACCCUGCCu 2 20 424 444 [hg19:17:29326130-29326150:+] 0.7067 151 7 -29.35 -0.9824 MIMAT0005871 hsa-miR-1207-5p 84282 RNF135 ggggaggGUCGGAGGGACGGu :|| | ||||||| uaaagaaUAGGC-CCCUGCCu 2 15 804 823 [hg19:17:29326510-29326529:+] 0.6086 144 7 -19.57 -0.1865 MIMAT0005876 hsa-miR-1285 84282 RNF135 uccAGAGUGAAACAACGGGUCu ||||||| ||||||||| ggaUCUCACUAGGUUGCCCAGg 2 20 113 134 [hg19:17:29326322-29326343:+] 0.4986 179 7 -34.25 -0.1023 MIMAT0005918 hsa-miR-1265 84282 RNF135 uuguugugaACUG-GUGUAGGAc ||:| :||||||| cuggcuguaUGGCUUACAUCCUg 2 14 446 468 [hg19:17:29326152-29326174:+] 0.7067 148 7 -19.24 -0.8102 MIMAT0005942 hsa-miR-1288 84282 RNF135 agAGGUCUAG-UCCCGUCAGGu ||| |:|| ||||||| auUCCUGGUCUCAAGCAGUCCu 2 20 145 166 [hg19:17:29326354-29326375:+] 0.4986 150 7 -23.75 -0.3152 MIMAT0005942 hsa-miR-1288 84282 RNF135 agAGGUCUAG-UCCCGUCAGGu ||| |:|| ||||||| auUCCUGGUCUCAAGCAGUCCu 2 20 648 669 [hg19:17:29326354-29326375:+] 0.4986 150 7 -23.75 -0.2363 MIMAT0005948 hsa-miR-664* 84282 RNF135 uagguuaguaaaaggGAUCGGUCa |||||||| uggaauggaaggggaCUAGCCAGc 2 10 250 273 [hg19:17:29325956-29325979:+] 0.7399 145 7 -15.03 -0.1642 MIMAT0006765 hsa-miR-1825 84282 RNF135 ccUCUCCUCCCGU-GACCu :| || ||||| |||| ggGGUGGUGGGCAUCUGGc 2 17 324 342 [hg19:17:29326030-29326048:+] 0.7316 124 0 -26.00 -0.2660 MIMAT0006766 hsa-miR-1826 84282 RNF135 uaacgcaaGCUUC--ACAGCU--ACUAGUUa :|||| || | | ||||||| gugggcagUGAAGCAUGCCAAUGUGAUCAAu 2 20 455 485 [hg19:17:29326664-29326694:+] 0.5415 149 7 -16.61 -0.2327 MIMAT0006766 hsa-miR-1826 84282 RNF135 uaacgcaaGCUUC--ACAGCU--ACUAGUUa :|||| || | | ||||||| gugggcagUGAAGCAUGCCAAUGUGAUCAAu 2 20 958 988 [hg19:17:29326664-29326694:+] 0.5415 149 7 -16.61 -0.1758 MIMAT0006767 hsa-miR-1827 84282 RNF135 uaaGUUAGAUGACGGAGu | |||| ||||||| guaCCAUCU-CUGCCUCc 2 16 409 425 [hg19:17:29326115-29326131:+] 0.7067 153 7 -16.79 -0.7128 MIMAT0007883 hsa-miR-1909 84282 RNF135 gccACUCGUGGGCCGGGGACGc | | | : ||||||||| aaaUAAAGAAUAGGCCCCUGCc 2 20 298 319 [hg19:17:29326507-29326528:+] 0.6086 151 7 -23.43 -0.2521 MIMAT0007883 hsa-miR-1909 84282 RNF135 gccACUCGUGGGCCGGGGACGc | | | : ||||||||| aaaUAAAGAAUAGGCCCCUGCc 2 20 801 822 [hg19:17:29326507-29326528:+] 0.6086 151 7 -23.43 -0.1901 MIMAT0007884 hsa-miR-1910 84282 RNF135 uccgccgucCGUGUC-CUGACc |:|||| ||||| aggauucccGUACAGUGACUGu 2 13 31 52 [hg19:17:29325737-29325758:+] 0.6771 120 0 -19.73 -0.2229 MIMAT0007891 hsa-miR-1915* 84282 RNF135 ccgggcCCGUCGUUCC-GUUCCa |||| || || ||||| cugcauGGCA-CAUGGUCAAGGa 2 17 277 298 [hg19:17:29325983-29326004:+] 0.7316 122 0 -18.80 -0.6807 MIMAT0011159 hsa-miR-2115* 84282 RNF135 gauCGGAGGUACUUAA-GACUAc ||||:: | ||| ||||| uguGCCUUUCUUCAUUGCUGAUu 2 20 650 672 [hg19:17:29326859-29326881:+] 0.5761 127 0 -12.08 -1.1395 MIMAT0011159 hsa-miR-2115* 84282 RNF135 gauCGGAGGUACUUAA-GACUAc ||||:: | ||| ||||| uguGCCUUUCUUCAUUGCUGAUu 2 20 1153 1175 [hg19:17:29326859-29326881:+] 0.5761 127 0 -12.08 -1.0697 MIMAT0013802 hsa-miR-2861 84282 RNF135 ggcggGUGGCGGUCCGGGg :::: |||||||| ucuuaUGUUCCCAGGCCCu 2 15 109 127 [hg19:17:29325815-29325833:+] 0.7365 146 7 -22.54 -0.4040 MIMAT0014978 hsa-miR-3116 84282 RNF135 ucagggAUGAUACAA-GGUCCGu | :|||||| |||||| gccaggUCUUAUGUUCCCAGGCc 2 17 103 125 [hg19:17:29325809-29325831:+] 0.7365 132 6 -21.21 -0.8563 MIMAT0014981 hsa-miR-3119 84282 RNF135 cgguaguuUCAAUUUUCGGu || |||||||| caaucccuAG-UAAAAGCCc 2 13 482 500 [hg19:17:29326691-29326709:+] 0.5602 146 7 -11.38 -0.4074 MIMAT0014981 hsa-miR-3119 84282 RNF135 cgguaguuUCAAUUUUCGGu || |||||||| caaucccuAG-UAAAAGCCc 2 13 985 1003 [hg19:17:29326691-29326709:+] 0.5602 146 7 -11.38 -0.3198 MIMAT0015001 hsa-miR-3135 84282 RNF135 gugacgucagaGUCGGAUCCGu || ||||||| aaagcccuggaCA-CCUAGGCa 2 12 494 514 [hg19:17:29326703-29326723:+] 0.5612 141 7 -17.98 -0.3247 MIMAT0015001 hsa-miR-3135 84282 RNF135 gugacgucagaGUCGGAUCCGu || ||||||| aaagcccuggaCA-CCUAGGCa 2 12 997 1017 [hg19:17:29326703-29326723:+] 0.5612 141 7 -17.98 -0.2502 MIMAT0015009 hsa-miR-548t 84282 RNF135 guUUUUGGUGCUAGUGAAAAc ||:| :|| ||||||| uuAAGAAUAC---CACUUUUu 2 20 74 91 [hg19:17:29326283-29326300:+] 0.5265 147 7 -8.04 -0.9611 MIMAT0015009 hsa-miR-548t 84282 RNF135 guuuUUGGUGC-UA--GUGAAAAc ::||| | || ||||||| accuGGCCAAGAAUACCACUUUUg 2 18 215 238 [hg19:17:29326424-29326447:+] 0.5137 147 7 -14.84 -0.5232 MIMAT0015009 hsa-miR-548t 84282 RNF135 guUUUUGGUGCUAGUGAAAAc ||:| :|| ||||||| uuAAGAAUAC---CACUUUUu 2 20 577 594 [hg19:17:29326283-29326300:+] 0.5265 147 7 -8.04 -0.8486 MIMAT0015009 hsa-miR-548t 84282 RNF135 guuuUUGGUGC-UA--GUGAAAAc ::||| | || ||||||| accuGGCCAAGAAUACCACUUUUg 2 18 718 741 [hg19:17:29326424-29326447:+] 0.5137 147 7 -14.84 -0.4160 MIMAT0015028 hsa-miR-3154 84282 RNF135 agACGAGGGUUGAGGGGA-AGAc ||:|||||: |||| ||| uaUGUUCCCAG--GCCCUGUCUu 2 21 112 132 [hg19:17:29325818-29325838:+] 0.7365 125 0 -24.33 -0.2560 MIMAT0015028 hsa-miR-3154 84282 RNF135 agacgagggUUGAGGGGAAGAc |:||: |||||| aggagggaaAGCUUGCCUUCUa 2 14 352 373 [hg19:17:29326058-29326079:+] 0.7192 125 6 -13.98 -0.1102 MIMAT0015031 hsa-miR-3157 84282 RNF135 ucugacgugaucGGACCGACUu :|||||||| ggguggugggcaUCUGGCUGAa 2 11 325 346 [hg19:17:29326031-29326052:+] 0.7316 146 7 -19.79 -0.5782 MIMAT0015032 hsa-miR-3158 84282 RNF135 caggACGUCUCUCCUUCGGGAa | | || ||||||| ucaaUCCCUAGUAAAAGCCCUg 2 19 481 502 [hg19:17:29326690-29326711:+] 0.5602 142 7 -15.10 -0.4839 MIMAT0015032 hsa-miR-3158 84282 RNF135 caggACGUCUCUCCUUCGGGAa | | || ||||||| ucaaUCCCUAGUAAAAGCCCUg 2 19 984 1005 [hg19:17:29326690-29326711:+] 0.5602 142 7 -15.10 -0.3864 MIMAT0015033 hsa-miR-3159 84282 RNF135 caccgGCUGUGAAC----AUUAGGAu | || :||| ||||||| gaauaCCACUUUUGAAGUUAAUCCUu 2 18 225 250 [hg19:17:29326434-29326459:+] 0.5287 144 7 -13.58 -0.8827 MIMAT0015033 hsa-miR-3159 84282 RNF135 caccgGCUGUGAAC----AUUAGGAu | || :||| ||||||| gaauaCCACUUUUGAAGUUAAUCCUu 2 18 728 753 [hg19:17:29326434-29326459:+] 0.5287 144 7 -13.58 -0.7694 MIMAT0015044 hsa-miR-3169 84282 RNF135 gaUACACGGUUCGUGU-CAGGAu ||| |||: | || ||||| agAUGAGCCGCGACCAGGUCCUg 2 21 202 224 [hg19:17:29325908-29325930:+] 0.7481 128 0 -19.72 -0.1483 MIMAT0015057 hsa-miR-3180-5p 84282 RNF135 gcugcacCCCGCCUCGCAGACCUUc || | : | ||||||| guucccaGGCCCUGUCUUCUGGAAa 2 19 115 139 [hg19:17:29325821-29325845:+] 0.7365 146 7 -12.90 -1.1023 MIMAT0015057 hsa-miR-3180-5p 84282 RNF135 gcugcaccccgccucgcaGACCUUc |||||| ggcuguauggcuuacaucCUGGAAa 2 8 448 472 [hg19:17:29326154-29326178:+] 0.7067 120 6 -15.18 -0.1379 MIMAT0015378 hsa-miR-3065-3p 84282 RNF135 gagguuGUUAUAGG--ACCACGACu ||: ||| ||||||| ccaccuCAGCCUCCCAAGGUGCUGg 2 18 168 192 [hg19:17:29326377-29326401:+] 0.4986 144 7 -22.83 -0.1663 MIMAT0015378 hsa-miR-3065-3p 84282 RNF135 gagguuGUUAUAGG--ACCACGACu ||: ||| ||||||| ccaccuCAGCCUCCCAAGGUGCUGg 2 18 671 695 [hg19:17:29326377-29326401:+] 0.4986 144 7 -22.83 -0.1209 MIMAT0015071 hsa-miR-3189 84282 RNF135 gaUGGGGUAGUCUGGGUUCCc |||:|| | ||||||| ccACCUCAGC-CUCCCAAGGu 2 20 168 187 [hg19:17:29326377-29326396:+] 0.4986 153 7 -22.76 -0.1834 MIMAT0015071 hsa-miR-3189 84282 RNF135 gaUGGGGUAGUCUGGGUUCCc |||:|| | ||||||| ccACCUCAGC-CUCCCAAGGu 2 20 671 690 [hg19:17:29326377-29326396:+] 0.4986 153 7 -22.76 -0.1337 MIMAT0015085 hsa-miR-3200 84282 RNF135 gucUGGACUCAUCGCGUUCCAc :|:||| :||||||| ucaGCUUGA-CCUUGCAAGGUc 2 20 409 429 [hg19:17:29326618-29326638:+] 0.5662 145 7 -20.48 -0.2136 MIMAT0015085 hsa-miR-3200 84282 RNF135 gucUGGACUCAUCGCGUUCCAc :|:||| :||||||| ucaGCUUGA-CCUUGCAAGGUc 2 20 912 932 [hg19:17:29326618-29326638:+] 0.5662 145 7 -20.48 -0.1607 MIMAT0016845 hsa-miR-4296 84282 RNF135 acuCGGACU--CGGGUGUa |:|| | ||||||| uguGUCUCACCGCCCACAa 2 15 50 68 [hg19:17:29325756-29325774:+] 0.6660 145 7 -16.18 -0.3966 MIMAT0016856 hsa-miR-4303 84282 RNF135 gaCAGGAGUCGAGUCUu |||||::||||||| cuGUCCUUGGCUCAGAc 2 16 301 317 [hg19:17:29326007-29326023:+] 0.7316 167 7 -26.74 -0.1983 MIMAT0016858 hsa-miR-4306 84282 RNF135 auGACGGAAAGAGAGGu ||| | ||||||| ucCUG-GUCUCUCUCCc 2 16 534 549 [hg19:17:29326240-29326255:+] 0.5438 145 7 -14.94 -0.1452 MIMAT0016873 hsa-miR-4322 84282 RNF135 ggGGUGCGCGACU--CGGGUGUc |:::|: || | ||||||| gaCUGUGU-CUCACCGCCCACAa 2 20 47 68 [hg19:17:29325753-29325774:+] 0.6660 144 7 -19.03 -0.3996 MIMAT0016891 hsa-miR-4265 84282 RNF135 gggucucgacuCGGGUGUc ||||||| ugugucucaccGCCCACAa 2 9 50 68 [hg19:17:29325756-29325774:+] 0.6660 140 7 -13.23 -0.4089 MIMAT0016897 hsa-miR-4269 84282 RNF135 cggucccgacagacACGGACg |||||| ccauuagaauaucuUGCCUGa 2 8 345 365 [hg19:17:29326554-29326574:+] 0.6086 120 6 -14.22 -0.1286 MIMAT0016898 hsa-miR-4263 84282 RNF135 ccgguuccguGAAUCUUa :|||||| aauaccacuuUUUAGAAa 2 9 79 96 [hg19:17:29326288-29326305:+] 0.5125 124 6 -8.39 -0.1595 MIMAT0016898 hsa-miR-4263 84282 RNF135 ccgguuccguGAAUCUUa :|||||| aauaccacuuUUUAGAAa 2 9 582 599 [hg19:17:29326288-29326305:+] 0.5125 124 6 -8.39 -0.1144 MIMAT0016900 hsa-miR-4270 84282 RNF135 cgGGAGGGGACUGAGGGACu ||| :|| ||||||| uuCCUGGUCUCUCUCCCUGu 2 19 30 49 [hg19:17:29326239-29326258:+] 0.5438 154 7 -24.56 -0.4344 MIMAT0016900 hsa-miR-4270 84282 RNF135 cgGGAGGGGACUGAGGGACu ||| :|| ||||||| uuCCUGGUCUCUCUCCCUGu 2 19 533 552 [hg19:17:29326239-29326258:+] 0.5438 154 7 -24.56 -0.4929 MIMAT0016904 hsa-miR-4276 84282 RNF135 cguguacucAGUGACuc |||||| uguauccuuUCACUGua 3 9 679 695 [hg19:17:29326888-29326904:+] 0.5877 120 0 -8.44 -0.2198 MIMAT0016904 hsa-miR-4276 84282 RNF135 cguguacucAGUGACuc |||||| uguauccuuUCACUGua 3 9 1182 1198 [hg19:17:29326888-29326904:+] 0.5877 120 0 -8.44 -0.1656 MIMAT0016905 hsa-miR-4275 84282 RNF135 uuUCUUCACC-AUUAACc ||:|| || |||||| ccAGGAGAGGAUAAUUGg 2 16 609 626 [hg19:17:29326818-29326835:+] 0.5629 127 6 -16.82 -0.2371 MIMAT0016905 hsa-miR-4275 84282 RNF135 uuUCUUCACC-AUUAACc ||:|| || |||||| ccAGGAGAGGAUAAUUGg 2 16 1112 1129 [hg19:17:29326818-29326835:+] 0.5629 127 6 -16.82 -0.1793 MIMAT0016909 hsa-miR-4279 84282 RNF135 cuUCGGCCCUCCUCUc |||: ||||||| caAGCU--GAGGAGAc 2 15 429 442 [hg19:17:29326638-29326651:+] 0.5237 143 7 -14.65 -0.2291 MIMAT0016909 hsa-miR-4279 84282 RNF135 cuUCGGCCCUCCUCUc |||: ||||||| caAGCU--GAGGAGAc 2 15 932 945 [hg19:17:29326638-29326651:+] 0.5237 143 7 -14.65 -0.1729 MIMAT0016915 hsa-miR-4284 84282 RNF135 uaccccaCUACACUCGGg |:|||||||| gauuacaGGUGUGAGCCa 2 12 193 210 [hg19:17:29326402-29326419:+] 0.4986 151 7 -19.56 -0.5599 MIMAT0016915 hsa-miR-4284 84282 RNF135 uaccccaCUACACUCGGg |:|||||||| gauuacaGGUGUGAGCCa 2 12 696 713 [hg19:17:29326402-29326419:+] 0.4986 151 7 -19.56 -0.4478 MIMAT0016922 hsa-miR-4291 84282 RNF135 ucGACAAG-GACGACUu :| ||| :|||||| cuUUCUUCAUUGCUGAu 2 15 655 671 [hg19:17:29326864-29326880:+] 0.5761 133 6 -9.96 -0.1164 MIMAT0016925 hsa-miR-500b 84282 RNF135 ugggUCCAU-CGUUCCUAa ||||: ||||||| cuggAGGUGUCCAAGGAUu 2 15 18 36 [hg19:17:29325724-29325742:+] 0.6883 149 7 -16.77 -0.1124 MIMAT0000070 hsa-miR-17 84282 RNF135 gaUGGACGUGA---CAU-UCGUGAAAc ||:|| ||| | | | |||||| uaACUUG-ACUUAAGAAUACCACUUUu 2 22 65 90 [hg19:17:29326274-29326299:+] 0.5265 121 6 -13.74 -0.1310 MIMAT0000075 hsa-miR-20a 84282 RNF135 gaUGGACGUGA--UAU--UCGUGAAAu ||:|| ||| | | | |||||| uaACUUG-ACUUAAGAAUACCACUUUu 2 22 65 90 [hg19:17:29326274-29326299:+] 0.5265 121 6 -14.64 -0.1297 MIMAT0000078 hsa-miR-23a 84282 RNF135 ccuuuagGGACCGUUACACUa | || |||||||| agugaagCAUGCCAAUGUGAu 2 15 461 481 [hg19:17:29326670-29326690:+] 0.5415 154 7 -15.36 -0.1761 MIMAT0000078 hsa-miR-23a 84282 RNF135 ccuuuagGGACCGUUACACUa | || |||||||| agugaagCAUGCCAAUGUGAu 2 15 964 984 [hg19:17:29326670-29326690:+] 0.5415 154 7 -15.36 -0.1314 MIMAT0000087 hsa-miR-30a 84282 RNF135 gaaggucagcuccuACAAAUGu ||||||| gauaagaguguuuuUGUUUACc 2 9 364 385 [hg19:17:29326573-29326594:+] 0.6086 140 7 -8.97 -0.7964 MIMAT0000087 hsa-miR-30a 84282 RNF135 gaaggucagcuccuACAAAUGu ||||||| gauaagaguguuuuUGUUUACc 2 9 867 888 [hg19:17:29326573-29326594:+] 0.6086 140 7 -8.97 -0.6847 MIMAT0000089 hsa-miR-31 84282 RNF135 ucGAUACGG---UC--GUAGAACGGa ||| ||| || :|||||||| cuCUAAGCCAUUAGAAUAUCUUGCCu 2 20 338 363 [hg19:17:29326547-29326572:+] 0.6086 153 7 -21.89 -1.1396 MIMAT0000089 hsa-miR-31 84282 RNF135 ucGAUACGG---UC--GUAGAACGGa ||| ||| || :|||||||| cuCUAAGCCAUUAGAAUAUCUUGCCu 2 20 841 866 [hg19:17:29326547-29326572:+] 0.6086 153 7 -21.89 -1.0698 MIMAT0000093 hsa-miR-93 84282 RNF135 gaUGGAC---GUGCUUGUCGUGAAAc ||:|| :| |||:| |||||| uaACUUGACUUAAGAAUACCACUUUu 2 22 65 90 [hg19:17:29326274-29326299:+] 0.5265 136 6 -15.55 -0.1297 MIMAT0000099 hsa-miR-101 84282 RNF135 aagucaauaGUGUCA-UGACAu :||||| ||||| ggauucccgUACAGUGACUGUg 2 13 32 53 [hg19:17:29325738-29325759:+] 0.6771 120 0 -15.18 -0.4005 MIMAT0000103 hsa-miR-106a 84282 RNF135 gaUGGACGUGA---CAU-UCGUGAAAa ||:|| ||| | | | |||||| uaACUUG-ACUUAAGAAUACCACUUUu 2 22 65 90 [hg19:17:29326274-29326299:+] 0.5265 121 6 -15.37 -0.1310 MIMAT0000231 hsa-miR-199a-5p 84282 RNF135 cuUGUCCA---UCAGACUUGU-GACCc |||||| || | ||| |||| uuACAGGUGUGAGCCACCACACCUGGc 2 22 195 221 [hg19:17:29326404-29326430:+] 0.4986 120 0 -19.04 -0.2632 MIMAT0000231 hsa-miR-199a-5p 84282 RNF135 cuUGUCCA---UCAGACUUGU-GACCc |||||| || | ||| |||| uuACAGGUGUGAGCCACCACACCUGGc 2 22 698 724 [hg19:17:29326404-29326430:+] 0.4986 120 0 -19.04 -0.1964 MIMAT0000244 hsa-miR-30c 84282 RNF135 cgACUCUCACAUCCUACAAAUGu | ||||||| ||||||| gaUAAGAGUGU-UUUUGUUUACc 2 22 364 385 [hg19:17:29326573-29326594:+] 0.6086 159 7 -17.48 -0.7818 MIMAT0000244 hsa-miR-30c 84282 RNF135 cgACUCUCACAUCCUACAAAUGu | ||||||| ||||||| gaUAAGAGUGU-UUUUGUUUACc 2 22 867 888 [hg19:17:29326573-29326594:+] 0.6086 159 7 -17.48 -0.6698 MIMAT0000245 hsa-miR-30d 84282 RNF135 gaaggucagccccuACAAAUGu ||||||| gauaagaguguuuuUGUUUACc 2 9 364 385 [hg19:17:29326573-29326594:+] 0.6086 140 7 -7.64 -0.7964 MIMAT0000245 hsa-miR-30d 84282 RNF135 gaaggucagccccuACAAAUGu ||||||| gauaagaguguuuuUGUUUACc 2 9 867 888 [hg19:17:29326573-29326594:+] 0.6086 140 7 -7.64 -0.6847 MIMAT0000266 hsa-miR-205 84282 RNF135 guCUGAG----GC-CACCUUA-CUUCCu ||||| :| ||||||| ||||| ugGACUCUUGUUGUGUGGAAUGGAAGGg 2 21 235 262 [hg19:17:29325941-29325968:+] 0.7481 130 0 -28.10 -0.5684 MIMAT0000274 hsa-miR-217 84282 RNF135 agguuagucaaggacUACGUCAu ||||||| ugugggccuugggccAUGCAGUa 2 9 386 408 [hg19:17:29326595-29326617:+] 0.6086 140 7 -15.81 -0.4558 MIMAT0000274 hsa-miR-217 84282 RNF135 agguuagucaaggacUACGUCAu ||||||| ugugggccuugggccAUGCAGUa 2 9 889 911 [hg19:17:29326595-29326617:+] 0.6086 140 7 -15.81 -0.3617 MIMAT0000276 hsa-miR-219-5p 84282 RNF135 ucuUAACGCAAACCUGUUAGu ||| | ||||||||| ucuAUUCAG--UGGACAAUCa 2 19 370 388 [hg19:17:29326076-29326094:+] 0.7067 151 7 -15.71 -0.7365 MIMAT0000416 hsa-miR-1 84282 RNF135 uauguaugaaGAAAUGUAAGGu || ||||||| uguuugaaccCUGGACAUUCCa 2 13 277 298 [hg19:17:29326486-29326507:+] 0.5463 144 7 -14.11 -0.4037 MIMAT0000416 hsa-miR-1 84282 RNF135 uauguaugaaGAAAUGUAAGGu || ||||||| uguuugaaccCUGGACAUUCCa 2 13 780 801 [hg19:17:29326486-29326507:+] 0.5463 144 7 -14.11 -0.3142 MIMAT0000418 hsa-miR-23b 84282 RNF135 ccAUUAGGGACCGUUACACUa |:| | || |||||||| agUGAAGCAUGCCAAUGUGAu 2 20 461 481 [hg19:17:29326670-29326690:+] 0.5415 159 7 -15.97 -0.1761 MIMAT0000418 hsa-miR-23b 84282 RNF135 ccAUUAGGGACCGUUACACUa |:| | || |||||||| agUGAAGCAUGCCAAUGUGAu 2 20 964 984 [hg19:17:29326670-29326690:+] 0.5415 159 7 -15.97 -0.1314 MIMAT0000420 hsa-miR-30b 84282 RNF135 ucgaCUCACAUCCUACAAAUGu |||||| ||||||| auaaGAGUGU-UUUUGUUUACc 2 19 365 385 [hg19:17:29326574-29326594:+] 0.6086 152 7 -16.25 -0.7818 MIMAT0000420 hsa-miR-30b 84282 RNF135 ucgaCUCACAUCCUACAAAUGu |||||| ||||||| auaaGAGUGU-UUUUGUUUACc 2 19 868 888 [hg19:17:29326574-29326594:+] 0.6086 152 7 -16.25 -0.6698 MIMAT0000422 hsa-miR-124 84282 RNF135 ccGUAAGUGGCGCACGGAAu | | | :: :||||||| acCUUACCUUAUGUGCCUUu 2 19 639 658 [hg19:17:29326848-29326867:+] 0.5646 146 7 -16.87 -1.0455 MIMAT0000422 hsa-miR-124 84282 RNF135 ccGUAAGUGGCGCACGGAAu | | | :: :||||||| acCUUACCUUAUGUGCCUUu 2 19 1142 1161 [hg19:17:29326848-29326867:+] 0.5646 146 7 -16.87 -0.9574 MIMAT0000424 hsa-miR-128 84282 RNF135 uuucucUGGCCAAGUGACAcu |:| |||||||| aucuguAUCCUUUCACUGUaa 3 16 676 696 [hg19:17:29326885-29326905:+] 0.5877 135 0 -11.04 -0.2026 MIMAT0000424 hsa-miR-128 84282 RNF135 uuucucUGGCCAAGUGACAcu |:| |||||||| aucuguAUCCUUUCACUGUaa 3 16 1179 1199 [hg19:17:29326885-29326905:+] 0.5877 135 0 -11.04 -0.1520 MIMAT0000428 hsa-miR-135a 84282 RNF135 aguGUAUCCU-UAUU----UUUCGGUAu | |:||| |||| ||||||| gcuCCUGGGAGAUAACCUCUAAGCCAUu 2 21 322 349 [hg19:17:29326531-29326558:+] 0.6086 150 7 -15.62 -0.7570 MIMAT0000428 hsa-miR-135a 84282 RNF135 aguGUAUCCU-UAUU----UUUCGGUAu | |:||| |||| ||||||| gcuCCUGGGAGAUAACCUCUAAGCCAUu 2 21 825 852 [hg19:17:29326531-29326558:+] 0.6086 150 7 -15.62 -0.6439 MIMAT0000449 hsa-miR-146a 84282 RNF135 uuggguaccUUAA--GUCAAGAGu |||| ||||||| ggagaggauAAUUGGAAGUUCUCu 2 14 612 635 [hg19:17:29326821-29326844:+] 0.5629 144 7 -12.86 -0.4929 MIMAT0000449 hsa-miR-146a 84282 RNF135 uuggguaccUUAA--GUCAAGAGu |||| ||||||| ggagaggauAAUUGGAAGUUCUCu 2 14 1115 1138 [hg19:17:29326821-29326844:+] 0.5629 144 7 -12.86 -0.3944 MIMAT0000452 hsa-miR-154 84282 RNF135 gcuuccguugugcCUAUUGGAu |||||||| cuggcuccugggaGAUAACCUc 2 10 319 340 [hg19:17:29326528-29326549:+] 0.6086 145 7 -15.31 -0.2294 MIMAT0000452 hsa-miR-154 84282 RNF135 gcuuccguugugcCUAUUGGAu |||||||| cuggcuccugggaGAUAACCUc 2 10 822 843 [hg19:17:29326528-29326549:+] 0.6086 145 7 -15.31 -0.1726 MIMAT0000455 hsa-miR-185 84282 RNF135 agUCCUUGACGGA--A-AGAGAGGu || :::| ||| | ||||||| acAGUGGUUUCCUGGUCUCUCUCCc 2 21 525 549 [hg19:17:29326231-29326255:+] 0.5438 150 7 -21.32 -0.1466 MIMAT0000462 hsa-miR-206 84282 RNF135 ggugugugaaGGA-AUGUAAGGu ||| ||||||| auguuugaacCCUGGACAUUCCa 2 13 276 298 [hg19:17:29326485-29326507:+] 0.5463 143 7 -16.07 -0.4037 MIMAT0000462 hsa-miR-206 84282 RNF135 ggugugugaaGGA-AUGUAAGGu ||| ||||||| auguuugaacCCUGGACAUUCCa 2 13 779 801 [hg19:17:29326485-29326507:+] 0.5463 143 7 -16.07 -0.3142 MIMAT0000646 hsa-miR-155 84282 RNF135 ugggGAUAGUGCUAA-UCGUAAUu ||: | ||| ||||||| auugCUGGGAGAAUUAAGCAUUAu 2 20 572 595 [hg19:17:29326781-29326804:+] 0.5612 150 7 -10.31 -0.7684 MIMAT0000646 hsa-miR-155 84282 RNF135 ugGGGAUAG--UGCUAAUCGUAAUu ||||:|| :|: ||||||| ggCCCUGUCUUCUGGAAAGCAUUAc 2 22 122 146 [hg19:17:29325828-29325852:+] 0.7365 156 7 -21.99 -0.5855 MIMAT0000646 hsa-miR-155 84282 RNF135 ugggGAUAGUGCUAA-UCGUAAUu ||: | ||| ||||||| auugCUGGGAGAAUUAAGCAUUAu 2 20 1075 1098 [hg19:17:29326781-29326804:+] 0.5612 150 7 -10.31 -0.6561 MIMAT0000680 hsa-miR-106b 84282 RNF135 uagacgugacagucGUGAAAu |||||| ugacuuaagaauacCACUUUu 2 8 70 90 [hg19:17:29326279-29326299:+] 0.5265 120 6 -7.46 -0.1310 MIMAT0004679 hsa-miR-296-3p 84282 RNF135 ccuCUCGGA--GGUGG--GUUGGGAg | |:|| ||:|| ||||||| acuGUGUCUCACCGCCCACAACCCUa 2 20 48 73 [hg19:17:29325754-29325779:+] 0.6660 153 7 -24.55 -0.4277 MIMAT0000692 hsa-miR-30e 84282 RNF135 gaaggucaguuccuACAAAUGu ||||||| gauaagaguguuuuUGUUUACc 2 9 364 385 [hg19:17:29326573-29326594:+] 0.6086 140 7 -7.13 -0.7964 MIMAT0000692 hsa-miR-30e 84282 RNF135 gaaggucaguuccuACAAAUGu ||||||| gauaagaguguuuuUGUUUACc 2 9 867 888 [hg19:17:29326573-29326594:+] 0.6086 140 7 -7.13 -0.6847 MIMAT0000703 hsa-miR-361-5p 84282 RNF135 caUG-GGGACCUCUA--AGACUAUu || :|||||| || |||||| uuACAUCCUGGAAAUUACCUGAUAa 2 21 459 483 [hg19:17:29326165-29326189:+] 0.7067 134 6 -21.79 -0.2203 MIMAT0000722 hsa-miR-370 84282 RNF135 uggUCCAAGGUGGGGUC-GUCCg |||||:: : |||| |||| gagAGGUUUUCUACCAGCCAGGu 2 20 87 109 [hg19:17:29325793-29325815:+] 0.7012 131 0 -22.48 -0.5707 MIMAT0000730 hsa-miR-377 84282 RNF135 uguUUUCA---ACGGAAACACACUa :|||| | |:||||||||| uuuGAAGUUAAUCCUUUUGUGUGAu 2 20 235 259 [hg19:17:29326444-29326468:+] 0.5063 162 7 -19.53 -0.8737 MIMAT0000730 hsa-miR-377 84282 RNF135 uguUUUCA---ACGGAAACACACUa :|||| | |:||||||||| uuuGAAGUUAAUCCUUUUGUGUGAu 2 20 738 762 [hg19:17:29326444-29326468:+] 0.5063 162 7 -19.53 -0.7602 MIMAT0000758 hsa-miR-135b 84282 RNF135 aguGUAUCCUUACUU-----UUCGGUAu | |:|||: || ||||||| gcuCCUGGGAGAUAACCUCUAAGCCAUu 2 21 322 349 [hg19:17:29326531-29326558:+] 0.6086 143 7 -14.78 -0.7570 MIMAT0000758 hsa-miR-135b 84282 RNF135 aguGUAUCCUUACUU-----UUCGGUAu | |:|||: || ||||||| gcuCCUGGGAGAUAACCUCUAAGCCAUu 2 21 825 852 [hg19:17:29326531-29326558:+] 0.6086 143 7 -14.78 -0.6439 MIMAT0001075 hsa-miR-384 84282 RNF135 auACUUGUUAAAGAUCCUUa ||:||| ||||||| agUGGACA----CUAGGAAu 2 19 152 167 [hg19:17:29325858-29325873:+] 0.7423 145 7 -17.26 -0.5817 MIMAT0001413 hsa-miR-20b 84282 RNF135 gaUGGACGUGAUAC---UCGUGAAAc ||:|| :|| | | |||||| uaACUUGACUUAAGAAUACCACUUUu 2 22 65 90 [hg19:17:29326274-29326299:+] 0.5265 124 6 -11.95 -0.1297 MIMAT0002175 hsa-miR-485-5p 84282 RNF135 cuUAAGUAGUGCCG-GUCGGAGa | || || | | ||||||| gcAGUCCUCCCACCUCAGCCUCc 2 21 159 181 [hg19:17:29326368-29326390:+] 0.4986 151 7 -16.49 -0.2359 MIMAT0002175 hsa-miR-485-5p 84282 RNF135 cuUAAGUAGUGCCG-GUCGGAGa | || || | | ||||||| gcAGUCCUCCCACCUCAGCCUCc 2 21 662 684 [hg19:17:29326368-29326390:+] 0.4986 151 7 -16.49 -0.1740 MIMAT0004763 hsa-miR-488 84282 RNF135 cuGGUUCUUUAUCGGAAAGUu ::|| :|| ||||||| uuUUAAUCUGUAUCCUUUCAc 2 20 671 691 [hg19:17:29326880-29326900:+] 0.5877 151 7 -8.94 -1.0651 MIMAT0004763 hsa-miR-488 84282 RNF135 cuGGUUCUUUAUCGGAAAGUu ::|| :|| ||||||| uuUUAAUCUGUAUCCUUUCAc 2 20 1174 1194 [hg19:17:29326880-29326900:+] 0.5877 151 7 -8.94 -0.9803 MIMAT0002809 hsa-miR-146b-5p 84282 RNF135 ucggauaccUUAA--GUCAAGAGu |||| ||||||| ggagaggauAAUUGGAAGUUCUCu 2 14 612 635 [hg19:17:29326821-29326844:+] 0.5629 144 7 -12.67 -0.4929 MIMAT0002809 hsa-miR-146b-5p 84282 RNF135 ucggauaccUUAA--GUCAAGAGu |||| ||||||| ggagaggauAAUUGGAAGUUCUCu 2 14 1115 1138 [hg19:17:29326821-29326844:+] 0.5629 144 7 -12.67 -0.3944 MIMAT0002818 hsa-miR-496 84282 RNF135 cucuaACCGGUACAUUAUGAGu |||::: ||||||||| uacucUGGUUG-GUAAUACUCu 2 18 524 544 [hg19:17:29326733-29326753:+] 0.5612 159 7 -15.58 -0.5099 MIMAT0002818 hsa-miR-496 84282 RNF135 cucuaACCGGUACAUUAUGAGu |||::: ||||||||| uacucUGGUUG-GUAAUACUCu 2 18 1027 1047 [hg19:17:29326733-29326753:+] 0.5612 159 7 -15.58 -0.4096 MIMAT0002853 hsa-miR-519d 84282 RNF135 gugagauuucccuccGUGAAAc |||||| uugacuuaagaauacCACUUUu 2 8 69 90 [hg19:17:29326278-29326299:+] 0.5265 120 6 -8.31 -0.1272 MIMAT0002878 hsa-miR-506 84282 RNF135 agaugagucuuccCACGGAAu ||||||| gaccuuaccuuauGUGCCUUu 2 9 638 658 [hg19:17:29326847-29326867:+] 0.5646 140 7 -11.66 -1.0455 MIMAT0002878 hsa-miR-506 84282 RNF135 agaugagucuuccCACGGAAu ||||||| gaccuuaccuuauGUGCCUUu 2 9 1141 1161 [hg19:17:29326847-29326867:+] 0.5646 140 7 -11.66 -0.9574 MIMAT0003150 hsa-miR-455-5p 84282 RNF135 gcuacaucAGGU-UUCCGUGUAu ||:: | ||||||| gccagcucUCUGCAUGGCACAUg 2 15 268 290 [hg19:17:29325974-29325996:+] 0.7399 145 7 -15.16 -0.5042 MIMAT0003214 hsa-miR-551a 84282 RNF135 accuuUGGUUCUCACC-CAGCg :|| ||: ||| |||| agguuGCCCAGGCUGGUGUCGa 2 17 123 144 [hg19:17:29326332-29326353:+] 0.4986 120 0 -22.74 -0.5426 MIMAT0003214 hsa-miR-551a 84282 RNF135 accuuUGGUUCUCACC-CAGCg :|| ||: ||| |||| agguuGCCCAGGCUGGUGUCGa 2 17 626 647 [hg19:17:29326332-29326353:+] 0.4986 120 0 -22.74 -0.4291 MIMAT0003281 hsa-miR-613 84282 RNF135 ccguuucuucCUUGUAAGGa |:||||||| uuugaacccuGGACAUUCCa 2 11 279 298 [hg19:17:29326488-29326507:+] 0.5463 146 7 -11.73 -0.4037 MIMAT0003281 hsa-miR-613 84282 RNF135 ccguuucuucCUUGUAAGGa |:||||||| uuugaacccuGGACAUUCCa 2 11 782 801 [hg19:17:29326488-29326507:+] 0.5463 146 7 -11.73 -0.3142 MIMAT0003389 hsa-miR-542-3p 84282 RNF135 aaAGUCAAUAGUUAGACA-GUGu |::|| || | ||||| ||| ggUUGGUAAU-ACUCUGUGCACa 2 21 530 551 [hg19:17:29326739-29326760:+] 0.5612 126 0 -13.56 -0.7415 MIMAT0003389 hsa-miR-542-3p 84282 RNF135 aaAGUCAAUAGUUAGACA-GUGu |::|| || | ||||| ||| ggUUGGUAAU-ACUCUGUGCACa 2 21 1033 1054 [hg19:17:29326739-29326760:+] 0.5612 126 0 -13.56 -0.6290

DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G035314 RNF135 Homo sapiens 84282

DNA & RNA Element - TargetScan Gene Name UTR Region Start UTR Region End AIR Total Normalized 3P-seq-tags & Pseudocounts Strand hg19_chromosome Genome Start Genome End RNF135; L13 1 15 100 45.085 + chr17 29326209 29326224 RNF135; L13 16 20 93.035 45.085 + chr17 29326224 29326229 RNF135; L13 21 715 85.929 45.085 + chr17 29326229 29326924 RNF135; L13 716 720 11.112 45.085 + chr17 29326924 29326929

DNA & RNA Element - RepTar Gene Name miRNA Begin End Profile RNF135 hsa-miR-582-5p beg:1190 end:1210 pic:3' TCATTGACCAACTTGTTGACATT 5'& |||| |||||||| &5' ----ACTGTAATA--AACTGTAA 3' RNF135 hsa-miR-496 beg:1029 end:1047 pic:3' CTCTAACCGGTACATTATGAGT 5'& |||... ||||||||| &5' -----TGGTTG-GTAATACTC- 3' RNF135 hsa-miR-1265 beg:452 end:469 pic:3' TTGTTGTGAACTG-GTGTAGGAC 5'& ||.| .|||||||| &5' ---------TGGCTTACATCCTG 3' RNF135 hsa-miR-206 beg:786 end:802 pic:3' GGTGTGTGAAGGAA-TGTAAGGT 5'& ||| |||||||| &5' ----------CCTGGACATTCCA 3' RNF135 hsa-miR-1 beg:787 end:802 pic:3' TATGTATGAAGAAATGTAAGGT 5'& || |||||||| &5' ----------CTGGACATTCCA 3' RNF135 hsa-miR-613 beg:789 end:801 pic:3' CCGTTTCTTCCTTGTAAGGA 5'& |.||||||| &5' ----------GGACATTCC- 3' RNF135 hsa-miR-630 beg:568 end:587 pic:3' TGGAAGGGACCATG-TCTTATGA 5'& |.|| ||||||| &5' ------CTTGACTTAAGAATAC- 3' RNF135 hsa-miR-26a-1star beg:799 end:815 pic:3' GCACGTTCATTGGTTCTTATCC 5'& ||. ||||||||| &5' ---------AATAAAGAATAGG 3' RNF135 hsa-miR-26a-2star beg:799 end:815 pic:3' CTTTGTTCATTAGTTCTTATCC 5'& ||| ||||||||| &5' ---------AATAAAGAATAGG 3' RNF135 hsa-miR-630 beg:710 end:734 pic:3' TGGAAGGGACCATGTCTTATGA 5'& ||| ||||| ||||||| &5' ACCACACCTGGCCAAGAATAC- 3' RNF135 kshv-miR-K12-11 beg:1079 end:1098 pic:3' AGCCTGTGTCCGATTCGTAATT 5'& ||| | .||||||||| &5' --GGAGAA---TTAAGCATTA- 3' RNF135 hsa-miR-1228 beg:691 end:710 pic:3' CCCCCCGCTCCGTCCACACT 5'& ||| ||||||||| &5' ---GGGATTA-CAGGTGTGA 3' RNF135 hsa-miR-146b-5p beg:1124 end:1138 pic:3' TCGGATACCTTAAGTCAAGAGT 5'& |||| ||||||| &5' ------TGGA----AGTTCTC- 3' RNF135 bkv-miR-B1-3p beg:649 end:665 pic:3' CTGAGACCTGTACCTAGTTCGT 5'& |||| | ||||||| &5' ----CTGGTC-----TCAAGCA 3' RNF135 bkv-miR-B1-5p beg:298 end:317 pic:3' TACGAGA-AGGGTTCAGAGTCTA 5'& || |||. .| |||||| &5' -----CTGTCCTTGG-CTCAGA- 3' RNF135 ebv-miR-BART3star beg:153 end:165 pic:3' TCGTGTTGTGATTGTGATCCA 5'& .|||||||| &5' -----------GACACTAGG- 3' RNF135 ebv-miR-BART3star beg:610 end:630 pic:3' TCGTGTTGTGATTGTGATCCA 5'& | . |. |||||||| &5' ---ATGGGATCT-CACTAGGT 3' RNF135 hsa-miR-485-5p beg:669 end:684 pic:3' CTTAAGTAGTGCCGGTCGGAGA 5'& ||| .||||||| &5' --------CACC-TCAGCCTC- 3' RNF135 hsa-miR-940 beg:119 end:133 pic:3' CCCCTCGCCCCCGGGACGGAA 5'& |||||||.||| &5' ----------GGCCCTGTCTT 3' RNF135 hsa-miR-940 beg:810 end:824 pic:3' CCCCTCGCCCCC-GGGACGGAA 5'& || |||||||| &5' ----------GGCCCCTGCCT- 3' RNF135 hsa-miR-940 beg:434 end:446 pic:3' CCCCTCGCCCCCGGGACGGAA 5'& ||||||||| &5' ------------CCCTGCCTT 3' RNF135 hsa-miR-30bstar beg:657 end:674 pic:3' CTTCATTTGTAGGTGGAGGGTC 5'& ||.|| ||||||| &5' -----AAGCAGT--CCTCCCA- 3' RNF135 hsa-miR-1205 beg:0 end:17 pic:3' GAGTTTCGTTTGGGACGTCT 5'& |.||| .||||||| &5' ---AGAGCCTTTCCTGCAG- 3' RNF135 hsa-miR-384 beg:150 end:168 pic:3' ATACTTGTTAAAGATCCTTA 5'& .||.||| |||||||| &5' -GTGGACA----CTAGGAAT 3' RNF135 hsa-miR-665 beg:817 end:833 pic:3' TCCCCGGAGTCGGAGGACCA 5'& |||| .| ||||||| &5' ----GCCT-GG-CTCCTGG- 3' RNF135 hsa-miR-1827 beg:409 end:425 pic:3' TAAGTTAGATGACGGAGT 5'& | |||| ||||||| &5' ---CCATCT-CTGCCTC- 3' RNF135 hsa-miR-520d-5p beg:422 end:437 pic:3' CTTTCCCGAAGGGAAACATC 5'& || |||||||| &5' -------CTCTCCTTTGTA- 3' RNF135 hsa-miR-524-5p beg:422 end:437 pic:3' CTCTTTCACGAAGGGAAACATC 5'& || |||||||| &5' ---------CTCTCCTTTGTA- 3' RNF135 ebv-miR-BART10star beg:172 end:194 pic:3' ACATGTCTTGGTTTCTCCACCG 5'& || |..| |.|||||| &5' ---ACTGGGCAGTTGGGGTGGC 3' RNF135 ebv-miR-BART10star beg:313 end:332 pic:3' ACATGTCTTGGTTTCTCCACCG 5'& |||| ||| |.|||||. &5' ---ACAG-ACCT--GGGGTGGT 3' RNF135 ebv-miR-BART12 beg:747 end:769 pic:3' TTGGTGTGGTTTGTGGTGTCCT 5'& || .|||||| &5' --CCTTTTGTGTGA-TACAGGA 3' RNF135 ebv-miR-BART15 beg:157 end:180 pic:3' AGTTCCTTTGTTTTGGTGACTG 5'& | ||||| |.||||||. &5' -CTAGGAATTGCAGCCACTGG- 3' RNF135 ebv-miR-BART17-3p beg:142 end:172 pic:3' TGATTC--C-CCTGTGGTCCGT-ATGT 5'& |||..| | ||||||.||| |.|| &5' ACTGGGAAGTGGACACTAGGAATTGCA 3' RNF135 ebv-miR-BART17-5p beg:1129 end:1141 pic:3' GAACATACGGACGCAGGAGAAT 5'& ||.|||||. &5' -------------GTTCTCTTG 3' RNF135 ebv-miR-BART18-5p beg:558 end:576 pic:3' ACATATCCT-TCACGCTTGAACT 5'& |||. ||| ||||||| &5' -----AGGGTAGT---AACTTGA 3' RNF135 ebv-miR-BART18-5p beg:762 end:778 pic:3' ACATATCCTTCACGCTTGAACT 5'& |||| .|||||||. &5' -----AGGA----TGAACTTGG 3' RNF135 ebv-miR-BART7 beg:998 end:1024 pic:3' GGGACCTGTGAC-CTGATACTAC 5'& |||||||||| |.| |.|| &5' CCCTGGACACCTAGGCATGGGTG 3' RNF135 ebv-miR-BART8 beg:285 end:305 pic:3' GACATGTTAGATCCTTTGGCAT 5'& | .|| |||||||.|| &5' ----ATGGTCAAGGAAACTGT- 3' RNF135 hsa-miR-219-5p beg:376 end:388 pic:3' TCTTAACGCAAACCTGTTAGT 5'& |||||||||| &5' -----------TGGACAATCA 3' RNF135 hsa-miR-3200 beg:916 end:932 pic:3' GTCTGGACTCATCGCGTTCCAC 5'& ||||| .||||||| &5' --GACCT------TGCAAGGT- 3' RNF135 hsa-miR-647 beg:159 end:177 pic:3' CTTCCTTCACTCACGTCGGTG 5'& ||||| ||||||||| &5' --AGGAAT----TGCAGCCAC 3' RNF135 hsa-miR-644 beg:1054 end:1072 pic:3' CGAGATTCTTTCGGTGTGA 5'& || |||||||| &5' --TCATTGT-AGCCACAC- 3' RNF135 hsa-miR-4303 beg:298 end:317 pic:3' GACAGGAGTCGAGTCTT 5'& ||||||| ||||||| &5' CTGTCCTTGGCTCAGA- 3' RNF135 hsa-miR-34astar beg:1164 end:1176 pic:3' TCCCGTCATATGAACGACTAAC 5'& ||||||||| &5' ------------TTGCTGATT- 3' RNF135 hsa-miR-455-5p beg:273 end:291 pic:3' GCTACATCAGGTTT-CCGTGTAT 5'& ||.. |||||||. &5' --------TCTGCATGGCACATG 3' RNF135 hsv1-miR-H2 beg:297 end:316 pic:3' TCAGCGTGAGCAGGGACCGAGTCC 5'& ||| ||||.|||||||| &5' ------ACT-GTCCTTGGCTCAG- 3' RNF135 hsv2-miR-H2 beg:299 end:317 pic:3' AGCGCGTACTGGGTCCGAGTCT 5'& || ||. |||||||| &5' -------TGTCCTTGGCTCAGA 3' RNF135 hsv1-miR-H6-3p beg:145 end:156 pic:3' CCCTACCTTCCTGCCCTTCAC 5'& |||||||| &5' -------------GGGAAGTG 3' RNF135 hsa-miR-629star beg:1073 end:1089 pic:3' CGACCCGAATGCAACCCTCTTG 5'& ||.| ||||||||. &5' -------TTGC--TGGGAGAAT 3' RNF135 hsa-miR-220b beg:314 end:334 pic:3' TTCACAGTCTG--TGCCACCACC 5'& ||||| . |||||||| &5' ------CAGACCTGGGGTGGTGG 3' RNF135 hsa-miR-4284 beg:700 end:713 pic:3' TACCCCACTACACTCGGG 5'& |.|||||||| &5' -------GGTGTGAGCC- 3' RNF135 hsa-miR-124 beg:1142 end:1161 pic:3' CCGTAAGTGGC--GCACGGAAT 5'& |.||| .||||||| &5' -----TTACCTTATGTGCCTT- 3' RNF135 hcmv-miR-UL36star beg:450 end:473 pic:3' CGTGCAACTTTTGT-GGACCTTT 5'& |.|.| ||| |||||||| &5' GTATGGCTT--ACATCCTGGAAA 3' RNF135 hcmv-miR-UL36star beg:13 end:23 pic:3' CGTGCAACTTTTGTGGACCTTT 5'& .||||||. &5' -------------GCCTGGAG- 3' RNF135 hcmv-miR-US25-1 beg:1016 end:1040 pic:3' CCAGGCTCGGTGAC-TC-GCCAA 5'& || .||||.||| .| .||| &5' GGG-TGAGCTACTCTGGTTGGT- 3' RNF135 hcmv-miR-US25-2-3p beg:363 end:383 pic:3' GGCGCCCTCGAGAGGT---TCACCTA 5'& || .||.| |||||| &5' --------GCCTTCTATTCAGTGGA- 3' RNF135 hiv1-miR-H1 beg:115 end:137 pic:3' CGGGTCCGT-GCGGAGGGACC 5'& ||||||| .|.|| .|||| &5' -CCCAGGCCCTGTCT-TCTGG 3' RNF135 hsa-let-7a beg:405 end:425 pic:3' TTGATATGTTGGATGATGGAGT 5'& |.||| |.|| ||.|||| &5' ---TGTACCATCT-CTGCCTC- 3' RNF135 hsa-let-7bstar beg:233 end:253 pic:3' CCCTTCCGTCATCCAACATATC 5'& || |||||.|.| &5' -----GGACTCTTGTTGTGTGG 3' RNF135 hsa-let-7c beg:406 end:425 pic:3' TTGGTATGTTGGATGATGGAGT 5'& .||| |.|| ||.|||| &5' ----GTACCATCT-CTGCCTC- 3' RNF135 hsa-let-7d beg:404 end:425 pic:3' TTGATACGT--TGGATGATGGAGA 5'& .||.| |.|| ||.|||| &5' ----GTGTACCATCT-CTGCCTC- 3' RNF135 hsa-let-7e beg:405 end:425 pic:3' TTGATATGTTGGAGGATGGAGT 5'& |.||| |.|| ||.|||| &5' ---TGTACCATCT-CTGCCTC- 3' RNF135 hsa-let-7f beg:405 end:425 pic:3' TTGATATGTTAGATGATGGAGT 5'& |.||| |||| ||.|||| &5' ---TGTACCATCT-CTGCCTC- 3' RNF135 hsa-let-7f-2star beg:386 end:405 pic:3' CCTTTCTGTCATCTGACATATC 5'& |||.| | ||||||. &5' GGAGAAGCTT----CTGTATG- 3' RNF135 hsa-let-7g beg:405 end:425 pic:3' TTGACATGTTTGATGATGGAGT 5'& ||||| || ||.|||| &5' ---TGTACCATCT-CTGCCTC- 3' RNF135 hsa-let-7gstar beg:1030 end:1053 pic:3' CGTTCCGTCACCG------GACATGTC 5'& ||. |||. ||||.|| &5' ----GGT--TGGTAATACTCTGTGCA- 3' RNF135 hsa-let-7i beg:406 end:425 pic:3' TTGTCGTGTTTGATGATGGAGT 5'& |.|| || ||.|||| &5' ----GTACCATCT-CTGCCTC- 3' RNF135 hsa-miR-103-2star beg:375 end:398 pic:3' GTTCCGTC-GTGACATTTCTTCGA 5'& | | || ..||||||| &5' ----GTGGACAATCAGGAGAAGCT 3' RNF135 hsa-miR-103-as beg:73 end:89 pic:3' TCGTCGTAACATGTCC-CGATACT 5'& .| || |||.||| &5' -----------GCTGGAGCTGTGA 3' RNF135 hsa-miR-106astar beg:1045 end:1066 pic:3' CATTCTTCACGAAT---GTAACGTC 5'& |||| |||||.|| &5' -------GTGCACACATCATTGTAG 3' RNF135 hsa-miR-1178 beg:319 end:337 pic:3' GATCCCTTCTTGTCACTCGTT 5'& ||.||| .|||.||| &5' CTGGGGT-----GGTGGGCA- 3' RNF135 hsa-miR-1179 beg:857 end:880 pic:3' GGTTGGTTACT-TTCTTACGAA 5'& |. .|| ||| ||||.||.|| &5' CTTGCC--TGATAAGAGTGTTT 3' RNF135 hsa-miR-1182 beg:111 end:128 pic:3' CAGTGTAGGGAGGGTTCTGGGAG 5'& . .|||| ||.|||| &5' -------TGTTCCC-AGGCCCT- 3' RNF135 hsa-miR-1183 beg:536 end:563 pic:3' ACGGGTGAGAGTGGTAGTGGAT-GTCAC 5'& |.|. ||||| |..|||.| ||| &5' -GTCT-CTCTCCCTGTCATCAATCAG-- 3' RNF135 hsa-miR-1204 beg:886 end:906 pic:3' TATTACCTCTGG--TCCGGTGCT 5'& || |.|| .|||||.| &5' ----TGTGGGCCTTGGGCCATG- 3' RNF135 hsa-miR-1207-5p beg:422 end:444 pic:3' GGGGAGGGT-CGGAGGGACGGT 5'& ||.||||. |. ||||||| &5' CCTCTCCTTTGTA-CCCTGCC- 3' RNF135 hsa-miR-1207-5p beg:663 end:682 pic:3' GGGGAGGGTCGGAGGGACGGT 5'& .||||||| |||| ||| &5' -TCCTCCCA-CCTCA--GCC- 3' RNF135 hsa-miR-1208 beg:35 end:49 pic:3' AGGCGGACAGACTTGTCACT 5'& |||. ||||||| &5' -CCGT--------ACAGTGA 3' RNF135 hsa-miR-1208 beg:950 end:969 pic:3' AGGCGGACAGACTTGTCACT 5'& ||| | ||..|||||| &5' ---GCCA-TGTGGGCAGTGA 3' RNF135 hsa-miR-1224-5p beg:409 end:428 pic:3' GGTGGAGGGCTCAGGAGTG 5'& |||.|| |.| ||||| &5' CCATCT-CTGCCTCCTC-- 3' RNF135 hsa-miR-1226 beg:621 end:644 pic:3' GATCCCTTGTGTCCCGACCACT 5'& ||||| .| || |||||||| &5' CTAGGTTGCCCA-GGCTGGTG- 3' RNF135 hsa-miR-1228star beg:45 end:67 pic:3' GTGTGTGG-ACGG-G-GGCGGGTG 5'& ||. ||.| | |||||||| &5' -----ACTGTGTCTCACCGCCCAC 3' RNF135 hsa-miR-1231 beg:298 end:319 pic:3' CGTCGACAGG---CGGGTCTGTG 5'& |||||| ||.|||||| &5' ----CTGTCCTTGGCTCAGACA- 3' RNF135 hsa-miR-1234 beg:624 end:642 pic:3' CACCCCACCCACCAGTCCGGCT 5'& || || |||||.|. &5' -------GGTTGCCCAGGCTGG 3' RNF135 hsa-miR-1246 beg:716 end:736 pic:3' GGACGAGGTTTTTA-GGTAA 5'& |||| ||||.||| ||| &5' CCTGG-CCAAGAATACCA-- 3' RNF135 hsa-miR-1261 beg:357 end:378 pic:3' TTCGGTTTCGGA--ATAGGTA 5'& ||||. |||| |||.|| &5' AAGCTT--GCCTTCTATTCA- 3' RNF135 hsa-miR-1266 beg:0 end:25 pic:3' TCGGGACAAGATGTCGGGACTCC 5'& ||||.| ||.|||||. |||| &5' AGCCTTTC-CTGCAGCCTGGAGG 3' RNF135 hsa-miR-1268 beg:665 end:682 pic:3' GGGGGTGGTGGTGCGGGC 5'& |.|||||| .|| |||. &5' CTCCCACC-TCA-GCCT- 3' RNF135 hsa-miR-1271 beg:959 end:979 pic:3' AC-TCACGAACGATCCACGGTTC 5'& | |||| || |||||| &5' -GCAGTGAA-GCA---TGCCAA- 3' RNF135 hsa-miR-1274a beg:774 end:796 pic:3' ACC-GCGGACTTGTC-CCTG 5'& || .|..||||| |||| &5' -GGATGTTTGAACCCTGGAC 3' RNF135 hsa-miR-1280 beg:320 end:335 pic:3' CCCACCGTCGCCACCCT 5'& ||| .|.|||||| &5' ---TGG-GGTGGTGGG- 3' RNF135 hsa-miR-128 beg:73 end:89 pic:3' TTTCTCTGGCCAAGTGACACT 5'& .|.|| .|||||| &5' ------GCTGGA--GCTGTGA 3' RNF135 hsa-miR-1285 beg:612 end:638 pic:3' TCC-AGAGTGAAACAACGGGTCT 5'& .|| ||||||| |||||||||. &5' GGGATCTCACTAGGTTGCCCAGG 3' RNF135 hsa-miR-1286 beg:3 end:16 pic:3' TCCCGAGTAGAACCAGGACGT 5'& ||| ||||||| &5' ---------CTT--TCCTGCA 3' RNF135 hsa-miR-1287 beg:161 end:185 pic:3' CTGAGC-TTGGTGACTAGGTCGT 5'& || |.| |.||||||. |||. &5' GAATTGCAGCCACTGGG-CAGT- 3' RNF135 hsa-miR-1288 beg:647 end:669 pic:3' AGAGGTCTAGTCC-CGTCAGGT 5'& .||| |.|| ||||||| &5' -TTCCTGGTCTCAAGCAGTCC- 3' RNF135 hsa-miR-1289 beg:226 end:243 pic:3' TTTTACGTCTAAGGACCTGAGGT 5'& .|| |||||||. &5' -------GGACTA-TGGACTCT- 3' RNF135 hsa-miR-1289 beg:19 end:39 pic:3' TTTTACGTCTA-AGGA-CCTGAGGT 5'& | ||.| ||| |||.||| &5' -----GGAGGTGTCCAAGGATTCC- 3' RNF135 hsa-miR-1289 beg:637 end:660 pic:3' TTTTACGTC-TAAGGACCTGAGGT 5'& ..||. | |||||||| ||| &5' --GGTGTCGAATTCCTGGTCTC-- 3' RNF135 hsa-miR-1292 beg:100 end:122 pic:3' GTCGCAGACGG-CCTTGG-GCAAGGGT 5'& ||| || .||||||| &5' --------GCCAGGTCTTATGTTCCCA 3' RNF135 hsa-miR-1295 beg:442 end:462 pic:3' AGTGGGTCTAGACG--CCGGATT 5'& .| | |||. |||.|| &5' ---TCTGG--CTGTATGGCTTA- 3' RNF135 hsa-miR-1296 beg:104 end:129 pic:3' CCTC--TACCTCGGTCCCGGGATT 5'& || ||| ||| ||||||. &5' GGTCTTATGTTCCCA-GGCCCTG- 3' RNF135 hsa-miR-1308 beg:998 end:1017 pic:3' GGTGACTTGGTGGGTACG 5'& || |||.| ||||.| || &5' CC-CTGGA-CACCTAGGC 3' RNF135 hsa-miR-1308 beg:785 end:802 pic:3' GGTGACTTGGTGGGTACG 5'& || |||.|| .||| &5' CC-CTGGACATTCCA--- 3' RNF135 hsa-miR-130astar beg:964 end:984 pic:3' CGTCTGTCATCGTGTTACACTT 5'& || || |||||||| &5' ---GAAGCATGC-CAATGTGA- 3' RNF135 hsa-miR-130bstar beg:244 end:264 pic:3' CATCACGTTGTCCCTTTCTCA 5'& ||| . ||||.|.| &5' ---GTGTGGAATGGAAGGGG- 3' RNF135 hsa-miR-138 beg:88 end:105 pic:3' GCCGGACTAAGTGTTGTGGTCGA 5'& |.||. .|||||| &5' ------GGTTTTC--TACCAGC- 3' RNF135 hsa-miR-139-3p beg:39 end:58 pic:3' TGAGGTTGTCCC-GGCGCAGAGG 5'& |||| | |.|.||||| &5' ------ACAGTGACTGTGTCTC- 3' RNF135 hsa-miR-140-5p beg:158 end:179 pic:3' GATGGTATCCC--ATTTTGGTGAC 5'& |||| |. |.|||||| &5' ------TAGGAATTGCAGCCACTG 3' RNF135 hsa-miR-141star beg:189 end:207 pic:3' AGGTTGTGACATGACCTTCTAC 5'& .|| ||||.||||| &5' ------GCTTC-CTGGGAGATG 3' RNF135 hsa-miR-145 beg:1112 end:1131 pic:3' TCCCTAAGGACCCTTTTGACCTG 5'& ||| ||| ||.|||| &5' --GGAGA----GGATAATTGGA- 3' RNF135 hsa-miR-146a beg:1118 end:1138 pic:3' TTGGGTACCTTAAGTCAAGAGT 5'& .|. |||| ||||||| &5' GATAATTGGA----AGTTCTC- 3' RNF135 hsa-miR-1470 beg:321 end:343 pic:3' GCCCCACGTGCCCGCCTCCCG 5'& |||||| ..|||| ||| &5' -GGGGTG-GTGGGCATCTGGC 3' RNF135 hsa-miR-1539 beg:685 end:705 pic:3' CCCGTAGACCCTGCGCGTCCT 5'& ||.. ||||||. |||| &5' -GGTG-CTGGGATTA-CAGG- 3' RNF135 hsa-miR-155 beg:124 end:146 pic:3' TGGGGATAGT--GCTAATCGTAATT 5'& |||.|| .|. ||||||| &5' ---CCTGTCTTCTGGAAAGCATTA- 3' RNF135 hsa-miR-181a-2star beg:362 end:382 pic:3' CCATGTCAGTTGCCAGTCACCA 5'& |.| || ||||||| &5' --TGCCTTCTAT--TCAGTGG- 3' RNF135 hsa-miR-181b beg:387 end:411 pic:3' TGGGTGGCTG-TCGT-----TACTTACAA 5'& || ||| ||||.||| &5' -------GAGAAGCTTCTGTATGAGTGT- 3' RNF135 hsa-miR-1825 beg:1112 end:1131 pic:3' CCTCTCCTCCCGTGACCT 5'& |||||||| |.|||| &5' GGAGAGGATA--ATTGGA 3' RNF135 hsa-miR-185 beg:532 end:547 pic:3' AGTCCTTGACGGAA-AGAGAGGT 5'& ||| ||||||. &5' ----------CCTGGTCTCTCT- 3' RNF135 hsa-miR-187 beg:335 end:360 pic:3' GGCCGACGTTGT-GTTCTGTGCT 5'& |.||||| ||| ..|| . || &5' CTGGCTG-AACCTTGAGGAGGGA 3' RNF135 hsa-miR-187star beg:1045 end:1068 pic:3' CGGGCCCAGGACAC---------AACATCGG 5'& ||||| |||||||| &5' ---------CTGTGCACACATCATTGTAGCC 3' RNF135 hsa-miR-1908 beg:426 end:444 pic:3' CTGGTTAGCGGCAGGGGCGGC 5'& || |.|. |||.||| &5' --CCT-TTGTA--CCCTGCC- 3' RNF135 hsa-miR-1908 beg:811 end:823 pic:3' CTGGTTAGCGGCAGGGGCGGC 5'& || |||.||| &5' --------GC---CCCTGCC- 3' RNF135 hsa-miR-1909 beg:0 end:15 pic:3' GCCACTCGTGGGCCGGGGACGC 5'& |||| |. ..||||| &5' ----GAGC-CT---TTCCTGC- 3' RNF135 hsa-miR-1909 beg:404 end:422 pic:3' GCCACTCGTGGGCCGGGGACGC 5'& | |.||| .|.|||| &5' ----GTGTACCA--TCTCTGC- 3' RNF135 hsa-miR-1915 beg:206 end:227 pic:3' GGGCGGCGCAG---CGGGACCCC 5'& |||||| |.|||||| &5' ---GCCGCGACCAGGTCCTGGG- 3' RNF135 hsa-miR-194star beg:158 end:180 pic:3' GTCTATTGTCGTCGGGGTGACC 5'& .||. ||. |||||| ||||| &5' TAGG-AATTGCAGCC--ACTGG 3' RNF135 hsa-miR-196a beg:455 end:480 pic:3' GGGTTGTTGTA-CTTTGATGGAT 5'& |. ||| ||||.|||||. &5' -CTTACATCCTGGAAATTACCTG 3' RNF135 hsa-miR-200bstar beg:621 end:644 pic:3' AGGTTACGACGGGTCATTCTAC 5'& |.|. |.||||||| |.|| &5' -CTAG-GTTGCCCAGGCTGGTG 3' RNF135 hsa-miR-202 beg:113 end:135 pic:3' AAGGGTACGGGATATGGAGA 5'& |||||| |||||.| |.||| &5' TTCCCAGGCCCTGT-CTTCT 3' RNF135 hsa-miR-204 beg:347 end:361 pic:3' TCCGTATCCTACTGTTTCCCTT 5'& ||| ..|||||| &5' ----------TGA-GGAGGGAA 3' RNF135 hsa-miR-211 beg:244 end:265 pic:3' TCCGCTTCC-TACTGTTTCCCTT 5'& |.| || |||. ||.|||| &5' --GTGT-GGAATGG-AAGGGGA- 3' RNF135 hsa-miR-211 beg:341 end:361 pic:3' TCCGCTTCCTACTGTTTCCCTT 5'& ||| ||| ..|||||| &5' ----GAACCTTGA-GGAGGGAA 3' RNF135 hsa-miR-2114 beg:682 end:701 pic:3' CTGGCGAAGTTCCTT--CCCTGAT 5'& ||||| ||||.|| &5' --------CAAGGTGCTGGGATTA 3' RNF135 hsa-miR-2114 beg:502 end:521 pic:3' CTGGCGAAGTTCCTTCCCTGAT 5'& |.||| ||||||.|| &5' ----GTTTCCT--AAGGGATTA 3' RNF135 hsa-miR-2117 beg:1070 end:1089 pic:3' GACAGGAACCGTTTCTCTTGT 5'& || || .|||||. &5' ---TCATT-GCTGGGAGAAT- 3' RNF135 hsa-miR-216a beg:681 end:701 pic:3' AGTGTCAACGGT----CGACTCTAAT 5'& ||| ||||.||||| &5' ---------CCAAGGTGCTGGGATTA 3' RNF135 hsa-miR-218-2star beg:215 end:237 pic:3' GCGCCACGAACTGTCTTGGTAC 5'& ||| || | ||.||.||| &5' ---GGTCCTGGGAAGGACTATG 3' RNF135 hsa-miR-24-2star beg:947 end:965 pic:3' GACACAAAGTCGAGT-CATCCGT 5'& |.||| || ||.|||| &5' -------TTAGC-CATGTGGGCA 3' RNF135 hsa-miR-25star beg:405 end:424 pic:3' GTTAACG-GGTTCAGAGGCGGA 5'& ||. ||| ||||.|||| &5' ----TGTACCA--TCTCTGCCT 3' RNF135 hsa-miR-26a beg:555 end:576 pic:3' TCGGATAGGACCTAA--TGAACTT 5'& ||| || |||||| &5' -----ATCAGGGTAGTAACTTGA- 3' RNF135 hsa-miR-26a beg:453 end:481 pic:3' TCGGAT--AGGACCT--AATGAACTT 5'& .||.|| ||||||| |||| ||| &5' GGCTTACATCCTGGAAATTACCTGA- 3' RNF135 hsa-miR-26b beg:454 end:481 pic:3' TGGAT--AGGACTT--AATGAACTT 5'& .|.|| |||||.| |||| ||| &5' GCTTACATCCTGGAAATTACCTGA- 3' RNF135 hsa-miR-28-5p beg:821 end:831 pic:3' GAGTTATCTGACACTCGAGGAA 5'& .|||||| &5' --------------GGCTCCT- 3' RNF135 hsa-miR-28-5p beg:383 end:401 pic:3' GAGTTATCTGACACTCGAGGAA 5'& |||. ||| ||||.|| &5' -TCAGGAGA-----AGCTTCT- 3' RNF135 hsa-miR-2861 beg:664 end:684 pic:3' GGCGGGTGGCGGTCCGGGG 5'& || |||||| .|| |||.| &5' CCTCCCACC-TCA-GCCTC 3' RNF135 hsa-miR-2909 beg:987 end:1007 pic:3' GGTTCTCTACAACCGGGATTG 5'& || || |||||.. &5' CCTAGTAAAA---GCCCTGG- 3' RNF135 hsa-miR-299-5p beg:686 end:714 pic:3' TACATAC-ACCCTG-----C-CATTTGGT 5'& .|| |||||. | ||.|.||| &5' ----GTGCTGGGATTACAGGTGTGAGCCA 3' RNF135 hsa-miR-302b beg:141 end:162 pic:3' GATGATTTTGTACCTTCGTGAAT 5'& ||||...| .|||| |||| &5' -TACTGGGAAGTGGA--CACT-- 3' RNF135 hsa-miR-302c beg:1005 end:1031 pic:3' GGTGACTTTGTACC--TTCG-TGAAT 5'& ||| |..||||| .||| ||| &5' -CACCTAGGCATGGGTGAGCTACT-- 3' RNF135 hsa-miR-302d beg:141 end:162 pic:3' TGTGAGTTTGTACCTTCGTGAAT 5'& .||| ..| .|||| |||| &5' -TACTGGGAAGTGGA--CACT-- 3' RNF135 hsa-miR-3065-3p beg:665 end:696 pic:3' GAGGTTGTTATAGGA-----CCACGACT 5'& |||| || ||| |||||||. &5' CTCCCACCTCAGCCTCCCAAGGTGCTGG 3' RNF135 hsa-miR-30b beg:869 end:888 pic:3' TCGACTCACATCCTACAAATGT 5'& |||||| ||||||| &5' ----GAGTGTTTT-TGTTTAC- 3' RNF135 hsa-miR-30c beg:868 end:888 pic:3' CGACTCTCACATCCTACAAATGT 5'& ||||||| ||||||| &5' ----AGAGTGTTTT-TGTTTAC- 3' RNF135 hsa-miR-30c-2star beg:657 end:674 pic:3' TCTCATTTGTCGGAAGAGGGTC 5'& ||.|||.| |||||| &5' -----AAGCAGTC--CTCCCA- 3' RNF135 hsa-miR-3119 beg:980 end:1003 pic:3' CGGTAGTTTCA----ATTTTCGGT 5'& ||||| |||||||| &5' ---ATCAATCCCTAGTAAAAGCC- 3' RNF135 hsa-miR-3120 beg:232 end:250 pic:3' ACGGACAGATGTGAACGACAC 5'& || || ||||.|||| &5' ----TGG--ACTCTTGTTGTG 3' RNF135 hsa-miR-31 beg:844 end:867 pic:3' TCGATACGGTC-----GTAGAACGGA 5'& |||| .||||||||| &5' ------GCCATTAGAATATCTTGCCT 3' RNF135 hsa-miR-3126-5p beg:528 end:551 pic:3' ACGAA-GACCGTAGACAGGGAGT 5'& |.|| ||||. ||| ||||| &5' -GTTTCCTGGTCTCTCTCCCT-- 3' RNF135 hsa-miR-3127 beg:985 end:1007 pic:3' GAAGGGTAAGGTGTTCGGGACTA 5'& |||| ||||||||. &5' --TCCCTAGTAA-AAGCCCTGG- 3' RNF135 hsa-miR-3127 beg:106 end:129 pic:3' GAAGGG--TAAGGTGTTCGGGACTA 5'& ||.. .|||| ||.|||||| &5' --TCTTATGTTCC-CAGGCCCTG-- 3' RNF135 hsa-miR-3127 beg:1084 end:1104 pic:3' GAAGGGTAAGGTGTTC-GGGACTA 5'& ||| .|| .||||| &5' ------ATTAAGCATTATCCTGA- 3' RNF135 hsa-miR-3131 beg:0 end:23 pic:3' TTC-CGGGAAGGTGGTCAGGAGCT 5'& || |||.|||| ||| ||| || &5' -AGAGCCTTTCCTGCAG-CCTGGA 3' RNF135 hsa-miR-3138 beg:408 end:431 pic:3' TGAGGGAGATGGAGTGACAGGTGT 5'& || .||||.|||| || ||| &5' ACCATCTCTGCCTC-CTCTCC--- 3' RNF135 hsa-miR-3141 beg:425 end:447 pic:3' AGGAGGAG--GTGGG-CGGGAG 5'& .|||||. .|||| |||.|| &5' -TCTCCTTTGTACCCTGCCTTC 3' RNF135 hsa-miR-3141 beg:663 end:683 pic:3' AGGAGGAGGTGGGCG-GGAG 5'& ||||| |||||. |||| &5' TCCTC--CCACCTCAGCCTC 3' RNF135 hsa-miR-3145 beg:840 end:862 pic:3' GTTAAGGTTTGTGAGTTTTATAGA 5'& ||.||.| |.|.||||||| &5' ----TCTAAGCCATTAGAATATCT 3' RNF135 hsa-miR-3156 beg:92 end:113 pic:3' ACAGAGGGTGAA-GGTCTAGAAA 5'& |.|.|.|| ||||.|||| &5' --TTTTCTACCAGCCAGGTCTT- 3' RNF135 hsa-miR-3158 beg:985 end:1005 pic:3' CAGGACGTCTCTCCTTCGGGAA 5'& ||| .|| ||||||| &5' -TCCC-TAGTAA--AAGCCCT- 3' RNF135 hsa-miR-3162 beg:419 end:441 pic:3' GAGGGGTGGGAAGATGAGGGATT 5'& ||||.| ||.|| ||| ||. &5' CTCCTCTCCTTTGTAC-CCT--- 3' RNF135 hsa-miR-3169 beg:650 end:670 pic:3' GATACACGGTTCGTGTCAGGAT 5'& || |.| .||||||| &5' ---TG-GTCTCAAGCAGTCCT- 3' RNF135 hsa-miR-3173 beg:414 end:434 pic:3' ACCGGACGGATAAAGGAGGAAA 5'& .|||||| .||||||| &5' ---TCTGCCTCC--TCTCCTTT 3' RNF135 hsa-miR-3175 beg:528 end:552 pic:3' TGCAGT-GACGCA-AGAGAGGGGC 5'& ||. ||| || ||||||||.| &5' --GTTTCCTG-GTCTCTCTCCCTG 3' RNF135 hsa-miR-3180-5p beg:119 end:139 pic:3' GCTGCACCCCGCCTCGC-AGACCTTC 5'& ||| |. ||||||| &5' --------GGCCCTGTCTTCTGGAA- 3' RNF135 hsa-miR-3180-5p beg:453 end:472 pic:3' GCTGCACCCCGCCTCGCAGACCTTC 5'& ||| |||||| &5' --------GGCTTACATCCTGGAA- 3' RNF135 hsa-miR-3183 beg:1102 end:1122 pic:3' AGGCTCGCTGAGGC---TCTCTCCG 5'& |||||.| .|||||| &5' -------GACTCTGCCAGGAGAGG- 3' RNF135 hsa-miR-3187 beg:706 end:728 pic:3' GGCGCGTCGG-GGT----ACCGGTT 5'& |||| ||| ||||||| &5' ------AGCCACCACACCTGGCCAA 3' RNF135 hsa-miR-3188 beg:382 end:401 pic:3' GGGGCATAGGCGTGTTTCGGAGA 5'& ||| .||||.||| &5' ------ATCAGGA-GAAGCTTCT 3' RNF135 hsa-miR-3189 beg:666 end:690 pic:3' GATGGGGT--AGTCT--GGGTTCCC 5'& .|||| |||| ||||||| &5' ---TCCCACCTCAGCCTCCCAAGG- 3' RNF135 hsa-miR-3195 beg:883 end:903 pic:3' TTGGG--CCCGGGCCGCGC 5'& |||. |||||. | || &5' -ACCTGTGGGCCTTGGGC- 3' RNF135 hsa-miR-3199 beg:649 end:670 pic:3' TTGAA-AGAGGATTCCGTCAGGGA 5'& || |||| |||||||. &5' --CTGGTCTCAA---GCAGTCCT- 3' RNF135 hsa-miR-31star beg:278 end:293 pic:3' TACCGTTATACAACCGTATCGT 5'& ||||.||| &5' --------------GCATGGCA 3' RNF135 hsa-miR-320d beg:663 end:681 pic:3' AGGAGAGTTGGGTCGAAAA 5'& ||||| || |.|||| &5' TCCTCCCACCTCAGC---- 3' RNF135 hsa-miR-324-3p beg:310 end:332 pic:3' GGTC-GTCGTGGACCCCGTCA 5'& ||| ||| |||||||| || &5' -CAGACAG-ACCTGGGGTGGT 3' RNF135 hsa-miR-324-5p beg:760 end:783 pic:3' TGTGG-TTACGGGATCCCCTACGC 5'& |.|| .||| || ||||||. &5' ATACAGGATGAACTT-GGGATGT- 3' RNF135 hsa-miR-325 beg:127 end:151 pic:3' TGTGAATGACCTG-TG-GATGATCC 5'& ||| ||||| .| .||||.|| &5' ---CTT-CTGGAAAGCATTACTGGG 3' RNF135 hsa-miR-326 beg:247 end:269 pic:3' GACCT--CCTTCCCG-GGTCTCC 5'& |||| ||||||| |.|| &5' -TGGAATGGAAGGGGACTAG--- 3' RNF135 hsa-miR-328 beg:889 end:905 pic:3' TGCCTTCCCGTCTCTCCCGGTC 5'& |||| |||||| &5' ------GGGCCTT--GGGCCA- 3' RNF135 hsa-miR-338-3p beg:685 end:697 pic:3' GTTGTTTTAGTGACTACGACCT 5'& |.||||||. &5' -------------GGTGCTGGG 3' RNF135 hsa-miR-33astar beg:124 end:145 pic:3' CACTACGTGACACC-TTTGTAAC 5'& ||. .| ||| ||.|||| &5' ----TGTCTTCTGGAAAGCATT- 3' RNF135 hsa-miR-361-5p beg:457 end:484 pic:3' CATG-GGGACCTCTAA--GACTATT 5'& ||| .|||||| ||| ||||||| &5' -TACATCCTGGAAATTACCTGATAA 3' RNF135 hsa-miR-362-5p beg:14 end:37 pic:3' TGAGTGTGGATC-CA--AGGTTCCTAA 5'& .|||.| | |||||||||| &5' ------GCCTGGAGGTGTCCAAGGATT 3' RNF135 hsa-miR-377star beg:669 end:684 pic:3' CTTAAGTGGTTCCCGTTGGAGA 5'& |||| ||.|||| &5' -----CACCT----CAGCCTC- 3' RNF135 hsa-miR-4252 beg:512 end:534 pic:3' ACCACGAC--TGAGTCACCGG 5'& || || ||||||.. &5' -GGGATTACAACACAGTGGTT 3' RNF135 hsa-miR-4253 beg:10 end:30 pic:3' TGGGGGACCTGTACGGGA 5'& .| |||||| .||.|| &5' GCAGCCTGGAGGTGTCC- 3' RNF135 hsa-miR-4256 beg:545 end:564 pic:3' TGGA-AGTAGTCCAGTCTA 5'& ||| |||||| ||||. &5' -CCTGTCATCAA-TCAGG- 3' RNF135 hsa-miR-4257 beg:660 end:678 pic:3' GAGTCAG--GGGTGGAGACC 5'& ||||| |||||||| &5' --CAGTCCTCCCACCTC--- 3' RNF135 hsa-miR-4258 beg:318 end:335 pic:3' GGTTCCGCCACCGCCCC 5'& || || |||||.||| &5' CCT-GG-GGTGGTGGG- 3' RNF135 hsa-miR-4258 beg:629 end:647 pic:3' GGTTCCG-CCACCGCCCC 5'& || |||| |||| || &5' CCCAGGCTGGTGTCG--- 3' RNF135 hsa-miR-425star beg:633 end:657 pic:3' CCCG-CCTGTGCTGTAAGGGCTA 5'& ||| || ||| |||||.|.| &5' -GGCTGGTGTCGA-ATTCCTGGT 3' RNF135 hsa-miR-4266 beg:435 end:448 pic:3' CCGGTTCCGGAGGATC 5'& || ||||.||.| &5' --CCT--GCCTTCTGG 3' RNF135 hsa-miR-4268 beg:189 end:211 pic:3' GTGTAGGACTCTCCTCCTCGG 5'& .| |||||.||| ||||| &5' -GCTTCCTGGGAGAT-GAGCC 3' RNF135 hsa-miR-4268 beg:313 end:336 pic:3' GTGTA-GGACTCT-CCTCCTCGG 5'& ||| ||||.|. || || || &5' -ACAGACCTGGGGTGGTGG-GC- 3' RNF135 hsa-miR-4270 beg:424 end:441 pic:3' CGGGAGGGGACTGAGGGACT 5'& |.||||..|| ||||| &5' -CTCTCCTTTGTA-CCCTG- 3' RNF135 hsa-miR-4270 beg:811 end:835 pic:3' CGGGAGGGGACTGAGGGA-CT 5'& |||| . ||||.||||. || &5' GCCCCTGCCTGGCTCCTGGGA 3' RNF135 hsa-miR-4281 beg:664 end:686 pic:3' GGGGGGAGGGGCCCT-GGG 5'& ||.||| ||.| | ||| &5' CCTCCCACCTCAGCCTCCC 3' RNF135 hsa-miR-4291 beg:1160 end:1174 pic:3' TCGACAAG-GACGACTT 5'& ||| .|||||| &5' -----TTCATTGCTGA- 3' RNF135 hsa-miR-4294 beg:227 end:244 pic:3' GGGAC-GACATCTGAGGG 5'& | || |.|||||.. &5' ----GACTATGGACTCTT 3' RNF135 hsa-miR-4295 beg:352 end:370 pic:3' TTCCTTTTGTAACGTGAC 5'& |.|||||.| |||| || &5' AGGGAAAGC-TTGC-CT- 3' RNF135 hsa-miR-4296 beg:48 end:68 pic:3' ACTCGGACT--CGGGTGTA 5'& | |.|| ||||||| &5' -GTGTCTCACCGCCCACA- 3' RNF135 hsa-miR-4298 beg:415 end:440 pic:3' GACGGAGGAGGAGG--ACA-GGGTC 5'& ||||||||| |||| ||| ||| &5' CTGCCTCCT-CTCCTTTGTACCC-- 3' RNF135 hsa-miR-4299 beg:421 end:439 pic:3' CGGAGAGT--ACAGTGGTCG 5'& |||||| || .||| &5' -CCTCTCCTTTG-TACC--- 3' RNF135 hsa-miR-4300 beg:263 end:278 pic:3' CTTCATCAGGTCGAGGGT 5'& ||| |||||||.| &5' ----TAG-CCAGCTCTC- 3' RNF135 hsa-miR-4300 beg:104 end:122 pic:3' CTTCATCAGGT--CGAGGGT 5'& .|||. |.||||| &5' -----GGTCTTATGTTCCCA 3' RNF135 hsa-miR-4300 beg:657 end:674 pic:3' CTTCATCAGGTCGAGGGT 5'& ||| ||||| ||||| &5' -AAGCAGTCC---TCCCA 3' RNF135 hsa-miR-4301 beg:314 end:335 pic:3' AGTGTTCACTTCATCACCCT 5'& || | ||..||.||||| &5' -CAGACCTGGGGTGGTGGG- 3' RNF135 hsa-miR-4304 beg:10 end:29 pic:3' ACG--GGACCTGTACGGCC 5'& || |||||| .||.| &5' -GCAGCCTGGAGGTGTC-- 3' RNF135 hsa-miR-4304 beg:891 end:908 pic:3' ACGGGACCT-GTACGGCC 5'& |||.|||. ||||| &5' -GCCTTGGGCCATGC--- 3' RNF135 hsa-miR-4305 beg:316 end:335 pic:3' CTTGACCTCCACAGATCC 5'& || |||| |||| |.|| &5' GACCTGG-GGTGG-TGGG 3' RNF135 hsa-miR-4306 beg:532 end:547 pic:3' ATGACGGAA-AGAGAGGT 5'& ||| ||||||. &5' -----CCTGGTCTCTCT- 3' RNF135 hsa-miR-4310 beg:196 end:213 pic:3' CCCTGTACTTACGACG 5'& |||| |||| || || &5' GGGAGATGA--GCCGC 3' RNF135 hsa-miR-4314 beg:105 end:123 pic:3' GACAGGGTA-AAGGGTCTC 5'& |||..|| |||||||. &5' --GTCTTATGTTCCCAGG- 3' RNF135 hsa-miR-4316 beg:40 end:61 pic:3' GTGGTCGAT----CGGAGTGG 5'& |||. |.|||||| &5' ---CAGTGACTGTGTCTCACC 3' RNF135 hsa-miR-4317 beg:951 end:968 pic:3' TTTGAGGGA---CCGTTACA 5'& || ||||.|| &5' -----CCATGTGGGCAGTG- 3' RNF135 hsa-miR-4322 beg:680 end:703 pic:3' GGGGTG-CGCGACTCGGGTGTC 5'& |||| |.||||.| ..|||| &5' -CCCAAGGTGCTGGGATTACAG 3' RNF135 hsa-miR-4325 beg:688 end:710 pic:3' AGTGACTCT---GTTCACGTT 5'& .|||.|| ||.||| | &5' --GCTGGGATTACAGGTGTGA 3' RNF135 hsa-miR-4327 beg:660 end:682 pic:3' GGTCAGG-GGGTACGTTCGG 5'& |||||| |||| |||| &5' -CAGTCCTCCCACCTCAGCC 3' RNF135 hsa-miR-485-3p beg:386 end:407 pic:3' TCTCTCCTC-TCGGC-ACATACTG 5'& ||||| |||. ||||||| &5' ----AGGAGAAGCTTCTGTATGA- 3' RNF135 hsa-miR-486-3p beg:405 end:425 pic:3' TAGGACATGACTC-GACGGGGC 5'& ||||| |||||.| &5' ----TGTACCATCTCTGCCTC- 3' RNF135 hsa-miR-486-3p beg:425 end:446 pic:3' TAGG--ACATGACTCGACGGGGC 5'& ||| ||||| |||||.. &5' -TCCTTTGTACC---CTGCCTT- 3' RNF135 hsa-miR-490-5p beg:313 end:334 pic:3' TGGGTGGACCTCTAGGTACC 5'& || ||||||.| . .||| &5' ACAGACCTGGGG--TGGTGG 3' RNF135 hsa-miR-499-5p beg:100 end:114 pic:3' TTTGTAGTGAC-GTTCAGAATT 5'& | ||.|||||| &5' ----------GCCAGGTCTTA- 3' RNF135 hsa-miR-500 beg:672 end:701 pic:3' AGAGT----GGG-TCCATCGTTCCTAAT 5'& |||| ||| |||| || .|||||| &5' -CTCAGCCTCCCAAGGT-GCTGGGATTA 3' RNF135 hsa-miR-500b beg:680 end:700 pic:3' TGGG-TCCATCGTTCCTAA 5'& ||| |||| || .||||| &5' -CCCAAGGT-GCTGGGATT 3' RNF135 hsa-miR-505star beg:815 end:831 pic:3' TGTAGTTATGAAGGACCGAGGG 5'& || |||||||||. &5' ---------CTGCCTGGCTCCT 3' RNF135 hsa-miR-506 beg:1141 end:1161 pic:3' AGATGAGTCTTCC-CACGGAAT 5'& ||.| ||||||| &5' ----CTTACCTTATGTGCCTT- 3' RNF135 hsa-miR-508-3p beg:367 end:388 pic:3' AGATGAGGTTTTCCGATGTTAGT 5'& ||||.|| || ||||||| &5' TCTATTCAGT--GG--ACAATCA 3' RNF135 hsa-miR-509-3p beg:544 end:562 pic:3' GATGGGTGTCTGCA-TGGTTAGT 5'& ||| .|| |.|||||| &5' ---CCC-----TGTCATCAATCA 3' RNF135 hsa-miR-509-5p beg:898 end:912 pic:3' ACTAACGGTGACAGACGTCAT 5'& |||| ||||||| &5' -----GCCA-----TGCAGTA 3' RNF135 hsa-miR-513a-5p beg:884 end:893 pic:3' TACTGTGGAGGGACACTT 5'& ||||||. &5' ----------CCTGTGG- 3' RNF135 hsa-miR-514b-3p beg:628 end:648 pic:3' AGGTGAGTGTCT--CCACAGTTA 5'& . | | |||. ||||||.| &5' -TTGC-C-CAGGCTGGTGTCGA- 3' RNF135 hsa-miR-518a-5p beg:422 end:437 pic:3' CTTTCCCGAAGGGAAACGTC 5'& || ||||||.| &5' -------CTCTCCTTTGTA- 3' RNF135 hsa-miR-518c beg:343 end:366 pic:3' TGTGAGA-TTTCTCTTCGCGAAAC 5'& || ||. ..||.||| |||| &5' AC-CTTGAGGAGGGAAA-GCTT-- 3' RNF135 hsa-miR-518c beg:1103 end:1129 pic:3' TGTGAGAT--TTCTCTTCGCGAAAC 5'& |||||. |.||||.| ||| &5' --ACTCTGCCAGGAGAGGATAATTG 3' RNF135 hsa-miR-518cstar beg:84 end:104 pic:3' GTCTTTCACGAAGGGAGGTCTCT 5'& ||.|| |.||.|. |||| &5' --GAGAG-GTTTTCTACCAG--- 3' RNF135 hsa-miR-518estar beg:118 end:138 pic:3' GTCTTTCGCGAAGGGAGATCTC 5'& |.|| || |.|||.|| &5' ----AGGCCCTGTCTTCTGGA- 3' RNF135 hsa-miR-519astar beg:118 end:138 pic:3' GTCTTTCGCGAAGGGAGATCTC 5'& |.|| || |.|||.|| &5' ----AGGCCCTGTCTTCTGGA- 3' RNF135 hsa-miR-519b-5p beg:118 end:138 pic:3' GTCTTTCGCGAAGGGAGATCTC 5'& |.|| || |.|||.|| &5' ----AGGCCCTGTCTTCTGGA- 3' RNF135 hsa-miR-519c-5p beg:118 end:138 pic:3' GTCTTTCGCGAAGGGAGATCTC 5'& |.|| || |.|||.|| &5' ----AGGCCCTGTCTTCTGGA- 3' RNF135 hsa-miR-520a-5p beg:118 end:138 pic:3' TCTTTCATGAAGGGAGACCTC 5'& |.| || |.|||||| &5' ---AGGCCCTGTCTTCTGGA- 3' RNF135 hsa-miR-522star beg:118 end:138 pic:3' GTCTTTCGCGAAGGGAGATCTC 5'& |.|| || |.|||.|| &5' ----AGGCCCTGTCTTCTGGA- 3' RNF135 hsa-miR-523star beg:118 end:138 pic:3' GTCTTTCGCGAAGGGAGATCTC 5'& |.|| || |.|||.|| &5' ----AGGCCCTGTCTTCTGGA- 3' RNF135 hsa-miR-524-5p beg:738 end:759 pic:3' CTCTTTCACGAAGGGAAACATC 5'& .|||| |||.|||||. &5' ---GAAGTTAATCCTTTTGTG- 3' RNF135 hsa-miR-525-3p beg:1151 end:1162 pic:3' GCGAGATTTCCCTTCGCGGAAG 5'& |.|||||. &5' --------------GTGCCTTT 3' RNF135 hsa-miR-525-5p beg:120 end:138 pic:3' TCTTTCACGTA--GGGAGACCTC 5'& || .|.|||||| &5' -------GCCCTGTCTTCTGGA- 3' RNF135 hsa-miR-526b beg:568 end:583 pic:3' TGTCTTTCACGAAGGGAGTTCTC 5'& ||| ||.|||| &5' ----------CTTGACTTAAGA- 3' RNF135 hsa-miR-527 beg:422 end:437 pic:3' CTTTCCCGAAGGGAAACGTC 5'& || ||||||.| &5' -------CTCTCCTTTGTA- 3' RNF135 hsa-miR-541star beg:736 end:755 pic:3' TCACCCTGGCTGTCGTCTTAGGAAA 5'& ..|| ||. |||||||| &5' -------TTGA-AGTT-AATCCTTT 3' RNF135 hsa-miR-542-3p beg:535 end:556 pic:3' AAAGTCAAT-AGTTAGACAGTGT 5'& .|| || ||||||. &5' ----GGTCTCTCTCCCTGTCAT- 3' RNF135 hsa-miR-548j beg:681 end:702 pic:3' TGGTTTC-TGGCGTTAATGAAAA 5'& ||||.| .|.| .||||| &5' -CCAAGGTGCTGGGATTAC---- 3' RNF135 hsa-miR-548m beg:1144 end:1162 pic:3' GTTTTTGGTGTTTATGGAAAC 5'& ||| .|.||||| &5' -----ACCTTATGTGCCTTT- 3' RNF135 hsa-miR-548s beg:718 end:727 pic:3' TTTTATTGACGTCAAAACCGGTA 5'& |||||| &5' ----------------TGGCCA- 3' RNF135 hsa-miR-548t beg:719 end:742 pic:3' GTTTTTGGTGCTA---GTGAAAAC 5'& ..||| || |||||||| &5' ----GGCCAAGAATACCACTTTTG 3' RNF135 hsa-miR-548v beg:1045 end:1067 pic:3' ACCACGTTTTCATTGACATCGA 5'& ||||| |.|||||| &5' --GTGCACACATCATTGTAGC- 3' RNF135 hsa-miR-554 beg:248 end:268 pic:3' TGACCGA--CTCAGTCCTGATCG 5'& ||| || .|||||||| &5' --TGGAATGGAAG-GGGACTAGC 3' RNF135 hsa-miR-555 beg:868 end:890 pic:3' TAGTCTC-CAAGT-CGAATGGGA 5'& |||| |||. |.|||||. &5' ---AGAGTGTTTTTGTTTACCT- 3' RNF135 hsa-miR-564 beg:814 end:832 pic:3' CGGAC-GACTGTGGCACGGA 5'& |||| |||.| || || &5' -CCTGCCTGGCTCC-TG--- 3' RNF135 hsa-miR-566 beg:690 end:708 pic:3' CAACCCTAGTGTCCGCGGG 5'& ||||||.|||||.|. &5' --TGGGATTACAGGTGT-- 3' RNF135 hsa-miR-574-3p beg:397 end:411 pic:3' ACACCCACACACGTACTCGCAC 5'& ||.|||||.|| &5' ----------TGTATGAGTGT- 3' RNF135 hsa-miR-588 beg:710 end:728 pic:3' CAAGATTGG-GTAACACCGGTT 5'& ||| || ||||||| &5' ------ACCACACC-TGGCCAA 3' RNF135 hsa-miR-589 beg:76 end:98 pic:3' GAGTCTCGT--CTGCACCAAGAGT 5'& .|||| || | ||||.|| &5' ---GGAGCTGTGA-GAGGTTTTC- 3' RNF135 hsa-miR-592 beg:269 end:289 pic:3' TGTAGTAGCGTATAACTGTGTT 5'& .| || .||| ||.|||| &5' GC-TCTCTGCA---TGGCACA- 3' RNF135 hsa-miR-593star beg:621 end:646 pic:3' CGACTCGTTACGGA-CCGACCACGGA 5'& || |. |||| ||||||||.| &5' -CTAGGT--TGCCCAGGCTGGTGTC- 3' RNF135 hsa-miR-597 beg:751 end:766 pic:3' TGTCACCAGTAGCTCACTGTGT 5'& |.| ||||.||| &5' ----------TTGTGTGATACA 3' RNF135 hsa-miR-604 beg:161 end:175 pic:3' CAGGACTTAAGGCGTCGGA 5'& |||| .|||||| &5' -----GAAT--TGCAGCC- 3' RNF135 hsa-miR-608 beg:658 end:678 pic:3' TGCCTCGACAGGGTTGTGGTGGGGA 5'& ||| ||||. | |||||.| &5' ----AGCAGTCCT--C-CCACCTC- 3' RNF135 hsa-miR-615-5p beg:603 end:623 pic:3' CTAGGCTCGTGGCCCCTGGGGG 5'& ||| ||| ||||.|.| &5' GATA-GAGAT---GGGATCTC- 3' RNF135 hsa-miR-631 beg:100 end:112 pic:3' CGACTCCAGACCCGGTCCAGA 5'& ||||||||| &5' ------------GCCAGGTCT 3' RNF135 hsa-miR-635 beg:10 end:33 pic:3' CCTGTAACAAAGTCACGGGTTCA 5'& .|| .|||.||||| &5' --GCAGCCTGGAGGTGTCCAAG- 3' RNF135 hsa-miR-635 beg:624 end:638 pic:3' CCTGTAACAAAGTC-ACGGGTTCA 5'& .| ||||||.| &5' ------------GGTTGCCCAGG- 3' RNF135 hsa-miR-639 beg:959 end:985 pic:3' TGTCGCGAGCGT-TGGCGTCGCTA 5'& .|||.| ||| .|| |.||| &5' GCAGTGAA-GCATGCCAATGTGAT 3' RNF135 hsa-miR-640 beg:684 end:701 pic:3' TCTCCGTCCAAGGACCTAGTA 5'& |||| |. ||||.| &5' ------AGGTGCTGGGATTA- 3' RNF135 hsa-miR-642 beg:337 end:360 pic:3' GTTCTGTGTA--AACCTCTCCCTG 5'& |.| ||| |||||| &5' ---GGCTGAACCTTGAGGAGGGA- 3' RNF135 hsa-miR-645 beg:0 end:23 pic:3' AGTCGTCATGG---TCGGATCT 5'& ||| || |||||.|| &5' --AGCCTTTCCTGCAGCCTGGA 3' RNF135 hsa-miR-647 beg:87 end:107 pic:3' CTTCCTTCACTCAC--GTCGGTG 5'& ||.|| |||||| &5' ----GAGGTTTTCTACCAGCCA- 3' RNF135 hsa-miR-650 beg:409 end:427 pic:3' CAGGACTCTCGCGACGGAGGA 5'& || | ||||||||| &5' --CCAT----CTCTGCCTCCT 3' RNF135 hsa-miR-650 beg:425 end:448 pic:3' CAGGACTCTCGCGACGGAGGA 5'& |||| | | ||||||.|| &5' -TCCTTTGTACCCTGCCTTCT 3' RNF135 hsa-miR-651 beg:1085 end:1105 pic:3' GTTTTCAGTTCG-AATAGGATTT 5'& |.|||| |||||||.|| &5' ------TTAAGCATTATCCTGAA 3' RNF135 hsa-miR-661 beg:103 end:125 pic:3' TGCGCGTCCGGTCTCT--GGGTCCGT 5'& ||||.| ||||||| &5' -----CAGGTCTTATGTTCCCAGGC- 3' RNF135 hsa-miR-662 beg:688 end:710 pic:3' GACGACCC-GGTGTTGCACCCT 5'& ||||||| ..|||. ||| || &5' -TGCTGGGATTACAG-GTGTGA 3' RNF135 hsa-miR-663 beg:425 end:445 pic:3' CGCCAGGGCGCCGCGGGGCGGA 5'& |||. | |||.|||| &5' ----TCCTTT-GTACCCTGCCT 3' RNF135 hsa-miR-665 beg:183 end:201 pic:3' TCCCCGGAGTCGGAGGACCA 5'& ||||. .||.|||||| &5' -GGGGT---GGCTTCCTGG- 3' RNF135 hsa-miR-665 beg:637 end:657 pic:3' TCCCCGGAGTCGGAGGACCA 5'& ||. ||. .||||||| &5' ---GGTGTCGAATTCCTGGT 3' RNF135 hsa-miR-665 beg:434 end:450 pic:3' TCCCCGGAGTCGGAGGACCA 5'& || | ||||.|||| &5' -----CC-CTGCCTTCTGG- 3' RNF135 hsa-miR-744 beg:111 end:130 pic:3' ACGACAATCGGGATCGGGGCGT 5'& |||| ||| .||||.|. &5' ---TGTT--CCCAGGCCCTGT- 3' RNF135 hsa-miR-744 beg:0 end:16 pic:3' ACGACAATCGGGATCGGGGCGT 5'& ||||.| .||.||| &5' -------AGCCTT--TCCTGCA 3' RNF135 hsa-miR-760 beg:308 end:331 pic:3' AGGGG-TGTCTGGGTCTCGGC 5'& |.| ||||||| |.|. | &5' -CTCAGACAGACCTGGGGTGG 3' RNF135 hsa-miR-762 beg:666 end:682 pic:3' CGAGCCGGGGCCGGGGTCGGGG 5'& .||| ||.|||||.| &5' ------TCCCA-CCTCAGCCTC 3' RNF135 hsa-miR-765 beg:410 end:434 pic:3' GTAG---TGGAAGGAAGAGGAGGT 5'& |||| .|| ||| ||||||.. &5' CATCTCTGCC-TCC-TCTCCTTT- 3' RNF135 hsa-miR-767-3p beg:315 end:337 pic:3' TCTTTGGTACCCCA-TACTCGTCT 5'& |.||| |||||| .||.||| &5' --AGACC-TGGGGTGGTGGGCA-- 3' RNF135 hsa-miR-767-3p beg:949 end:966 pic:3' TCTTTGGTACCCCATACTCGTCT 5'& |.||||| ||.|||| &5' ---AGCCATG-----TGGGCAG- 3' RNF135 hsa-miR-769-5p beg:643 end:661 pic:3' TCGAGTCTTGGGTCTCCAGAGT 5'& |||..| ||||||| &5' ------GAATTCCT-GGTCTCA 3' RNF135 hsa-miR-770-5p beg:677 end:697 pic:3' ACCGGGACTGTGCACCATGACCT 5'& |||. || |||.||||. &5' --GCCTCC-CAA--GGTGCTGGG 3' RNF135 hsa-miR-875-3p beg:10 end:34 pic:3' GTGTTGGAG--TCACAAAGG-TCC 5'& .||.||| .||| ||| ||| &5' -GCAGCCTGGAGGTG--TCCAAGG 3' RNF135 hsa-miR-875-3p beg:516 end:540 pic:3' GTGTTGGAGTCA-CAAAGGTCC 5'& .||||| |||| |||||| || &5' TACAACA-CAGTGGTTTCCTGG 3' RNF135 hsa-miR-876-3p beg:694 end:717 pic:3' ACTTAATGAA-ACATTTGGTGGT 5'& |.||||| |||.|.|||||| &5' -GGATTACAGGTGTGAGCCACCA 3' RNF135 hsa-miR-877 beg:413 end:435 pic:3' GGGACGC-GGTAGAGGAGATG 5'& |.|||| || ||||||.|. &5' CTCTGCCTCC-TCTCCTTTG- 3' RNF135 hsa-miR-877star beg:1106 end:1131 pic:3' GACCCTCCTC-CCTCTTCTCCT 5'& ||| ||||| ||| || ||| &5' CTGCCAGGAGAGGATAATTGGA 3' RNF135 hsa-miR-877star beg:243 end:265 pic:3' GACCCTCCTCCCTCTTCTCCT 5'& || | ||| .||||.||| &5' -TGTGTGGAAT-GGAAGGGGA 3' RNF135 hsa-miR-892a beg:509 end:531 pic:3' GATGCGTCTTTCC--TGTGTCAC 5'& ||| .|.| |||||||| &5' CTAA--GGGATTACAACACAGTG 3' RNF135 hsa-miR-920 beg:261 end:279 pic:3' ATGA-CGAAGGTGTCGAGGGG 5'& ||| || ||||||.|. &5' -ACTAGC-----CAGCTCTCT 3' RNF135 hsa-miR-921 beg:1177 end:1197 pic:3' CTTAGGACCAAGACA---GGGAGTGATC 5'& ||||| |..|||||. &5' ----------TCTGTATCCTTTCACTG- 3' RNF135 hsa-miR-924 beg:1089 end:1111 pic:3' CGTTCTGTAGTG----TTCTGAGA 5'& ||| |||.|. |||||||| &5' --AAG-CATTATCCTGAAGACTCT 3' RNF135 hsa-miR-934 beg:365 end:385 pic:3' GGTCACAGAGGTCA--TCATCTGT 5'& ||.| |||.|||| &5' -------CTTCTATTCAGTGGACA 3' RNF135 hsa-miR-940 beg:402 end:424 pic:3' CCCCTCGCCCCC--GGGACGGAA 5'& |||.| |.|||||| &5' ---GAGTGTACCATCTCTGCCT- 3' RNF135 hsa-miR-942 beg:1103 end:1123 pic:3' GTGTACCGGTTTTGTCTCTTCT 5'& || |||| .||||.|| &5' -ACTCTGCCA----GGAGAGGA 3' RNF135 hsa-miR-942 beg:375 end:396 pic:3' GTGTACCGGTTTTGTCTCTTCT 5'& .||| ||| .|||||| &5' ---GTGGACAATCAGGAGAAG- 3' RNF135 hsa-miR-98 beg:406 end:425 pic:3' TTGTTATGTTGAATGATGGAGT 5'& .||| |. ||.|||| &5' ----GTACCATCT-CTGCCTC- 3' RNF135 hsv1-miR-H4 beg:1096 end:1114 pic:3' ACGAACGGACAGTTTGAGATGG 5'& |||| |.|||||.|| &5' ------CCTGA-AGACTCTGCC 3' RNF135 hsv2-miR-H10 beg:665 end:686 pic:3' GGCGGGTGGGGGCGT-GGG 5'& || ||||||.| || ||| &5' CCTCCCACCTCAGCCTCCC 3' RNF135 hsv2-miR-H3 beg:665 end:689 pic:3' GAGGGTTGGCGTCTGAGGGTTT 5'& ||||| ||| ||| |||||||. &5' CTCCC-ACCTCAGCCTCCCAAG 3' RNF135 hsv2-miR-H6 beg:360 end:376 pic:3' CGTAGGGGAGCGGAAGGTAA 5'& ||.||||||.||| &5' -------CTTGCCTTCTATT 3' RNF135 jcv-miR-J1-3p beg:649 end:665 pic:3' CTGAGACCTGTACCTAGTTCGT 5'& |||| | ||||||| &5' ----CTGGTC-----TCAAGCA 3' RNF135 kshv-miR-K12-10a beg:1022 end:1046 pic:3' CGGTGAGCCCC-CCTGTTGTGAT 5'& ||.|||| || || .||.||| &5' GCTACTCTGGTTGG-TAATACT- 3' RNF135 kshv-miR-K12-10a beg:138 end:163 pic:3' CGGTGAGCCCCCCTG---TTGTGAT 5'& ||.| |||| .|||||| &5' --CATTACT-GGGAAGTGGACACTA 3' RNF135 kshv-miR-K12-10astar beg:104 end:126 pic:3' TCACCACCATAGCGGGGTTCGG 5'& ||| ||| .||||.||| &5' ---GGTCTTATGTTCCCAGGCC 3' RNF135 kshv-miR-K12-12star beg:409 end:432 pic:3' AGTTGGTCC---CGTGGGAGGGGGT 5'& |||| || .||||.||. &5' ---ACCATCTCTGCCTCCTCTCCT- 3' RNF135 kshv-miR-K12-12star beg:532 end:550 pic:3' AGTTGGTCCCGTGGGAGGGGGT 5'& || ||. |.|||.||| &5' ----CCT-GGT-CTCTCTCCC- 3' RNF135 kshv-miR-K12-2star beg:188 end:206 pic:3' GTCGAGATCGGGACCTTCTAG 5'& .|||. |||||.|||| &5' -GGCTT----CCTGGGAGAT- 3' RNF135 kshv-miR-K12-2star beg:817 end:838 pic:3' GTCGAGATCG-GGACCTTCTAG 5'& || ||.|| |||||.|||| &5' --GC-CTGGCTCCTGGGAGAT- 3' RNF135 kshv-miR-K12-7 beg:602 end:621 pic:3' CGCGGTCGTTGTACCCTAGT 5'& || .| |||||||| &5' -CGATA--GAGATGGGATC- 3' RNF135 kshv-miR-K12-7 beg:681 end:701 pic:3' CGCGGTCGT-TGTACCCTAGT 5'& ||| .| ||||||.| &5' ---CCAAGGTGC-TGGGATTA 3' RNF135 sv40-miR-S1-5p beg:0 end:11 pic:3' TTCCGAGTAAAGTC-CGGGGAGT 5'& || |||..|| &5' ------------AGAGCCTTTC- 3'

DNA & RNA Element - miRcode Gene Name Type microRNA Seed Position Seed Type Total Cons% Tr Region RNF135 High_conserved miR-7/7ab chr17:29324286 7-mer-m8 22 CDS RNF135 High_conserved miR-135ab/135a-5p chr17:29326558 7-mer-m8 11 3pUTR RNF135 High_conserved miR-146ac/146b-5p chr17:29326844 7-mer-m8 9 3pUTR RNF135 High_conserved miR-150/5127 chr17:29325910 7-mer-A1 22 3pUTR, CDS RNF135 High_conserved miR-150/5127 chr17:29326542 7-mer-A1 22 3pUTR RNF135 High_conserved miR-150/5127 chr17:29326792 7-mer-A1 16 3pUTR RNF135 High_conserved miR-155 chr17:29325852 7-mer-m8 18 3pUTR, CDS RNF135 High_conserved miR-155 chr17:29326804 7-mer-m8 9 3pUTR RNF135 High_conserved miR-192/215 chr17:29326640 7-mer-A1 9 3pUTR RNF135 High_conserved miR-1ab/206/613 chr17:29326507 8-mer 22 3pUTR RNF135 High_conserved miR-217 chr17:29326617 8-mer 18 3pUTR RNF135 High_conserved miR-218/218a chr17:29315117 8-mer 9 CDS RNF135 High_conserved miR-219-5p/508/508-3p/4782-3p chr17:29320896 7-mer-A1 7 CDS RNF135 High_conserved miR-219-5p/508/508-3p/4782-3p chr17:29326094 8-mer 16 3pUTR, CDS RNF135 High_conserved miR-23abc/23b-3p chr17:29326690 7-mer-m8 7 3pUTR RNF135 High_conserved miR-24/24ab/24-3p chr17:29326419 7-mer-A1 16 3pUTR RNF135 High_conserved miR-26ab/1297/4465 chr17:29325707 7-mer-A1 13 3pUTR, CDS RNF135 High_conserved miR-30abcdef/30abe-5p/384-5p chr17:29326594 7-mer-m8 22 3pUTR RNF135 High_conserved miR-31 chr17:29326572 7-mer-m8 7 3pUTR RNF135 High_conserved miR-124/124ab/506 chr17:29326867 7-mer-m8 29 3pUTR RNF135 High_conserved miR-338/338-3p chr17:29298177 7-mer-A1 11 CDS, 5pUTR RNF135 High_conserved miR-34ac/34bc-5p/449abc/449c-5p chr17:29298225 7-mer-m8 11 CDS RNF135 High_conserved miR-34ac/34bc-5p/449abc/449c-5p chr17:29298301 7-mer-m8 11 5pUTR RNF135 High_conserved miR-34ac/34bc-5p/449abc/449c-5p chr17:29298396 7-mer-m8 4 CDS, 5pUTR RNF135 High_conserved miR-10abc/10a-5p chr17:29326272 7-mer-A1 16 3pUTR RNF135 High_conserved miR-455-5p chr17:29325996 7-mer-m8 36 3pUTR, CDS RNF135 Medium_conserved miR-544/544ab/544-3p chr17:29311724 7-mer-m8 11 CDS, 5pUTR RNF135 Medium_conserved miR-590-3p chr17:29315078 7-mer-A1 47 CDS RNF135 Medium_conserved miR-590-3p chr17:29326310 7-mer-A1 11 3pUTR RNF135 Medium_conserved miR-154/872 chr17:29326549 7-mer-m8 16 3pUTR RNF135 Medium_conserved miR-185/882/3473/4306/4644 chr17:29298422 7-mer-A1 0 CDS, 5pUTR RNF135 Medium_conserved miR-185/882/3473/4306/4644 chr17:29326255 7-mer-m8 13 3pUTR RNF135 Medium_conserved miR-224 chr17:29315014 7-mer-m8 29 CDS RNF135 Medium_conserved miR-224 chr17:29326285 7-mer-A1 7 3pUTR RNF135 Medium_conserved miR-296-3p chr17:29325779 8-mer 16 3pUTR, CDS RNF135 Medium_conserved miR-342-3p chr17:29325796 7-mer-A1 18 3pUTR, CDS RNF135 Medium_conserved miR-342-3p chr17:29326417 7-mer-m8 11 3pUTR RNF135 Medium_conserved miR-361-5p chr17:29326189 7-mer-A1 16 3pUTR, CDS RNF135 Medium_conserved miR-361-5p chr17:29326577 7-mer-A1 24 3pUTR RNF135 Medium_conserved miR-377 chr17:29326468 7-mer-m8 13 3pUTR RNF135 Medium_conserved miR-379/1193-5p/3529 chr17:29325808 7-mer-A1 13 3pUTR, CDS RNF135 Medium_conserved miR-384/384-3p chr17:29325873 7-mer-m8 16 3pUTR, CDS RNF135 Medium_conserved miR-125a-3p/1554 chr17:29315096 7-mer-m8 0 CDS RNF135 Medium_conserved miR-485-5p/1698/1703/1962 chr17:29320907 7-mer-m8 11 CDS RNF135 Medium_conserved miR-485-5p/1698/1703/1962 chr17:29326390 7-mer-m8 13 3pUTR RNF135 Medium_conserved miR-486-5p/3107 chr17:29326474 7-mer-A1 16 3pUTR RNF135 Medium_conserved miR-487b chr17:29326315 7-mer-A1 4 3pUTR RNF135 Medium_conserved miR-488 chr17:29326900 7-mer-m8 22 3pUTR RNF135 Medium_conserved miR-496 chr17:29326753 7-mer-m8 11 3pUTR

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score RNF135 RAID00012773 hsa-miR-219a-5p miRNA MIMAT0000276 RNF135 mRNA 84282 Prediction 0.1828 RNF135 RAID00031414 hsa-miR-20a-5p miRNA MIMAT0000075 RNF135 mRNA 84282 Prediction 0.1828 RNF135 RAID00050259 hsa-miR-101-3p miRNA MIMAT0000099 RNF135 mRNA 84282 CLIP-seq//Prediction 0.6308 RNF135 RAID00066541 hsa-miR-6736-3p miRNA MIMAT0027374 RNF135 mRNA 84282 Prediction 0.1828 RNF135 RAID00084890 hsa-miR-377-3p miRNA MIMAT0000730 RNF135 mRNA 84282 Prediction 0.2202 RNF135 RAID00169807 hsa-miR-4695-5p miRNA MIMAT0019788 RNF135 mRNA 84282 Prediction 0.1828 RNF135 RAID00192538 hsa-miR-146a-5p miRNA MIMAT0000449 RNF135 mRNA 84282 CLIP-seq//Prediction 0.6308 RNF135 RAID00255169 hsa-miR-30a-5p miRNA MIMAT0000087 RNF135 mRNA 84282 CLIP-seq//Prediction 0.6308 RNF135 RAID00285049 hsa-miR-630 miRNA MIMAT0003299 RNF135 mRNA 84282 Prediction 0.1828 RNF135 RAID00313351 hsa-miR-155-5p miRNA MIMAT0000646 RNF135 mRNA 84282 CLIP-seq//Prediction 0.6308 RNF135 RAID00411910 hsa-miR-217 miRNA MIMAT0000274 RNF135 mRNA 84282 CLIP-seq//Prediction 0.6308 RNF135 RAID00557310 hsa-miR-582-5p miRNA MIMAT0003247 RNF135 mRNA 84282 Prediction 0.1828 RNF135 RAID00559408 hsa-miR-4296 miRNA MIMAT0016845 RNF135 mRNA 84282 Prediction 0.1828 RNF135 RAID00602539 hsa-miR-30b-5p miRNA MIMAT0000420 RNF135 mRNA 84282 CLIP-seq//Prediction 0.6308 RNF135 RAID00647930 hsa-miR-3617-3p miRNA MIMAT0022966 RNF135 mRNA 84282 Prediction 0.1828 RNF135 RAID00668727 hsa-miR-7703 miRNA MIMAT0030018 RNF135 mRNA 84282 Prediction 0.1828 RNF135 RAID00798333 hsa-miR-496 miRNA MIMAT0002818 RNF135 mRNA 84282 CLIP-seq//Prediction 0.6308 RNF135 RAID00815609 hsa-miR-30d-5p miRNA MIMAT0000245 RNF135 mRNA 84282 CLIP-seq//Prediction 0.6308 RNF135 RAID00842644 hsa-miR-4441 miRNA MIMAT0018959 RNF135 mRNA 84282 Prediction 0.1828 RNF135 RAID00851327 hsa-miR-6860 miRNA MIMAT0027622 RNF135 mRNA 84282 CLIP-seq 0.5483 RNF135 RAID00885368 hsa-miR-135a-5p miRNA MIMAT0000428 RNF135 mRNA 84282 Prediction 0.2202 RNF135 RAID00916455 hsa-miR-507 miRNA MIMAT0002879 RNF135 mRNA 84282 CLIP-seq//Prediction 0.6308 RNF135 RAID00924513 hsa-miR-202-3p miRNA MIMAT0002811 RNF135 mRNA 84282 CLIP-seq 0.5483 RNF135 RAID00931884 hsa-miR-31-5p miRNA MIMAT0000089 RNF135 mRNA 84282 CLIP-seq//Prediction 0.6308 RNF135 RAID00948280 hsa-miR-20b-5p miRNA MIMAT0001413 RNF135 mRNA 84282 Prediction 0.1828 RNF135 RAID00978562 hsa-miR-129-5p miRNA MIMAT0000242 RNF135 mRNA 84282 Prediction 0.1828 RNF135 RAID01070890 hsa-miR-4714-3p miRNA MIMAT0019823 RNF135 mRNA 84282 CLIP-seq 0.5483 RNF135 RAID01144109 hsa-miR-455-5p miRNA MIMAT0003150 RNF135 mRNA 84282 CLIP-seq//Prediction 0.6308 RNF135 RAID01175731 hsa-miR-23a-3p miRNA MIMAT0000078 RNF135 mRNA 84282 Prediction 0.1828 RNF135 RAID01182147 hsa-miR-146b-5p miRNA MIMAT0002809 RNF135 mRNA 84282 CLIP-seq//Prediction 0.6308 RNF135 RAID01205443 hsa-miR-7977 miRNA MIMAT0031180 RNF135 mRNA 84282 Prediction 0.1828 RNF135 RAID01215359 hsa-miR-613 miRNA MIMAT0003281 RNF135 mRNA 84282 Prediction 0.1828 RNF135 RAID01227170 hsa-miR-34a-3p miRNA MIMAT0004557 RNF135 mRNA 84282 Prediction 0.1828 RNF135 RAID01377632 hsa-miR-6808-5p miRNA MIMAT0027516 RNF135 mRNA 84282 Prediction 0.1828 RNF135 RAID01440775 hsa-miR-384 miRNA MIMAT0001075 RNF135 mRNA 84282 Prediction 0.1828 RNF135 RAID01573180 hsa-miR-4713-5p miRNA MIMAT0019820 RNF135 mRNA 84282 Prediction 0.1828 RNF135 RAID01662767 hsa-miR-539-3p miRNA MIMAT0022705 RNF135 mRNA 84282 Prediction 0.1828 RNF135 RAID01735577 hsa-miR-206 miRNA MIMAT0000462 RNF135 mRNA 84282 Prediction 0.1828 RNF135 RAID01896477 hsa-miR-106b-5p miRNA MIMAT0000680 RNF135 mRNA 84282 Prediction 0.1828 RNF135 RAID01977799 hsa-miR-1306-5p miRNA MIMAT0022726 RNF135 mRNA 84282 Prediction 0.1828 RNF135 RAID02005996 hsa-miR-6893-5p miRNA MIMAT0027686 RNF135 mRNA 84282 Prediction 0.1828 RNF135 RAID02050493 hsa-miR-6751-3p miRNA MIMAT0027403 RNF135 mRNA 84282 Prediction 0.1828 RNF135 RAID02061227 hsa-miR-501-5p miRNA MIMAT0002872 RNF135 mRNA 84282 CLIP-seq 0.5483 RNF135 RAID02092501 hsa-miR-551a miRNA MIMAT0003214 RNF135 mRNA 84282 Prediction 0.1828 RNF135 RAID02190027 hsa-miR-17-5p miRNA MIMAT0000070 RNF135 mRNA 84282 Prediction 0.1828 RNF135 RAID02193778 hsa-miR-940 miRNA MIMAT0004983 RNF135 mRNA 84282 Prediction 0.1828 RNF135 RAID02203810 hsa-miR-557 miRNA MIMAT0003221 RNF135 mRNA 84282 Prediction 0.1828 RNF135 RAID02206316 hsa-miR-3174 miRNA MIMAT0015051 RNF135 mRNA 84282 CLIP-seq 0.5483 RNF135 RAID02217459 hsa-miR-542-3p miRNA MIMAT0003389 RNF135 mRNA 84282 CLIP-seq//Prediction 0.6308 RNF135 RAID02266841 hsa-miR-185-5p miRNA MIMAT0000455 RNF135 mRNA 84282 Prediction 0.1828 RNF135 RAID02304243 hsa-miR-205-5p miRNA MIMAT0000266 RNF135 mRNA 84282 Prediction 0.1828 RNF135 RAID02313284 hsa-miR-135b-5p miRNA MIMAT0000758 RNF135 mRNA 84282 Prediction 0.2202 RNF135 RAID02376085 hsa-miR-30e-5p miRNA MIMAT0000692 RNF135 mRNA 84282 CLIP-seq//Prediction 0.6308 RNF135 RAID02449772 hsa-miR-491-5p miRNA MIMAT0002807 RNF135 mRNA 84282 CLIP-seq 0.5483 RNF135 RAID02469091 hsa-miR-485-5p miRNA MIMAT0002175 RNF135 mRNA 84282 Prediction 0.1828 RNF135 RAID02510649 hsa-miR-370-3p miRNA MIMAT0000722 RNF135 mRNA 84282 Prediction 0.1828 RNF135 RAID02523077 hsa-miR-488-3p miRNA MIMAT0004763 RNF135 mRNA 84282 Prediction 0.2202 RNF135 RAID02592049 hsa-miR-5189-5p miRNA MIMAT0021120 RNF135 mRNA 84282 CLIP-seq 0.5483 RNF135 RAID02610655 hsa-miR-3908 miRNA MIMAT0018182 RNF135 mRNA 84282 Prediction 0.1828 RNF135 RAID02611370 hsa-miR-1-3p miRNA MIMAT0000416 RNF135 mRNA 84282 Prediction 0.1828 RNF135 RAID02641410 hsa-miR-6849-3p miRNA MIMAT0027599 RNF135 mRNA 84282 CLIP-seq 0.5483 RNF135 RAID02644878 hsa-miR-519d-3p miRNA MIMAT0002853 RNF135 mRNA 84282 Prediction 0.1828 RNF135 RAID02648845 hsa-miR-1226-3p miRNA MIMAT0005577 RNF135 mRNA 84282 CLIP-seq 0.5483 RNF135 RAID02663271 hsa-miR-106a-5p miRNA MIMAT0000103 RNF135 mRNA 84282 Prediction 0.1828 RNF135 RAID02700505 hsa-miR-181a-2-3p miRNA MIMAT0004558 RNF135 mRNA 84282 Prediction 0.1828 RNF135 RAID02723263 hsa-miR-199a-5p miRNA MIMAT0000231 RNF135 mRNA 84282 Prediction 0.1828 RNF135 RAID02737988 hsa-miR-5582-5p miRNA MIMAT0022279 RNF135 mRNA 84282 Prediction 0.1828 RNF135 RAID02775766 hsa-miR-128-3p miRNA MIMAT0000424 RNF135 mRNA 84282 Prediction 0.1828 RNF135 RAID02788906 hsa-miR-3187-5p miRNA MIMAT0019216 RNF135 mRNA 84282 CLIP-seq 0.5483 RNF135 RAID02796004 hsa-miR-362-5p miRNA MIMAT0000705 RNF135 mRNA 84282 CLIP-seq 0.5483 RNF135 RAID02932467 hsa-miR-143-3p miRNA MIMAT0000435 RNF135 mRNA 84282 CLIP-seq 0.5483 RNF135 RAID03052535 hsa-miR-6840-3p miRNA MIMAT0027583 RNF135 mRNA 84282 Prediction 0.1828 RNF135 RAID03057978 hsa-miR-361-5p miRNA MIMAT0000703 RNF135 mRNA 84282 CLIP-seq//Prediction 0.6308 RNF135 RAID03060261 hsa-miR-612 miRNA MIMAT0003280 RNF135 mRNA 84282 CLIP-seq 0.5483 RNF135 RAID03265804 hsa-miR-506-3p miRNA MIMAT0002878 RNF135 mRNA 84282 CLIP-seq//Prediction 0.6559 RNF135 RAID03487259 hsa-miR-548an miRNA MIMAT0019079 RNF135 mRNA 84282 Prediction 0.1828 RNF135 RAID03586194 hsa-miR-6504-5p miRNA MIMAT0025464 RNF135 mRNA 84282 Prediction 0.1828 RNF135 RAID03685759 hsa-miR-1285-3p miRNA MIMAT0005876 RNF135 mRNA 84282 CLIP-seq//Prediction 0.6308 RNF135 RAID03700557 hsa-miR-124-3p miRNA MIMAT0000422 RNF135 mRNA 84282 CLIP-seq//Prediction 0.6592 RNF135 RAID03701626 hsa-miR-939-3p miRNA MIMAT0022939 RNF135 mRNA 84282 CLIP-seq 0.5483 RNF135 RAID03754648 hsa-miR-30c-5p miRNA MIMAT0000244 RNF135 mRNA 84282 CLIP-seq//Prediction 0.6308 RNF135 RAID03766624 hsa-miR-661 miRNA MIMAT0003324 RNF135 mRNA 84282 CLIP-seq 0.5483 RNF135 RAID03814596 hsa-miR-154-5p miRNA MIMAT0000452 RNF135 mRNA 84282 Prediction 0.1828 RNF135 RAID03820216 hsa-miR-4474-3p miRNA MIMAT0019001 RNF135 mRNA 84282 Prediction 0.1828 RNF135 RAID03883712 hsa-miR-921 miRNA MIMAT0004971 RNF135 mRNA 84282 CLIP-seq 0.5483 RNF135 RAID03936049 hsa-miR-1199-5p miRNA MIMAT0031119 RNF135 mRNA 84282 Prediction 0.1828 RNF135 RAID03977903 hsa-miR-23b-3p miRNA MIMAT0000418 RNF135 mRNA 84282 Prediction 0.1828 RNF135 RAID04013051 hsa-miR-93-5p miRNA MIMAT0000093 RNF135 mRNA 84282 Prediction 0.1828 RNF135 RAID04026078 hsa-miR-296-3p miRNA MIMAT0004679 RNF135 mRNA 84282 Prediction 0.1828 RNF135 RAID04253666 CRNDE lncRNA 643911 RNF135 protein 84282 Microarray//RNA-seq 0.6606 RNF135 RAID04467257 TUG1 lncRNA 55000 RNF135 protein 84282 Microarray//RNA-seq 0.6606 RNF135 RAID04824633 MALAT1 lncRNA 378938 RNF135 protein 84282 Microarray//RNA-seq 0.6606