Mutation - TCGA Type Chromosome Start Position End Position Strand Variant Classification Variant Type Reference Allele Tumor_seq Allele 1 Tumor_seq Allele 2 Tumor Sample Barcode Matched Norm Sample Barcode Genome Change cDNA Change Codon Change Protein Change BLCA 3 150459962 150459962 + Missense_Mutation SNP C C T TCGA-XF-A9T5-01A-11D-A42E-08 TCGA-XF-A9T5-10A-01D-A42H-08 g.chr3:150459962C>T c.941G>A c.(940-942)gGa>gAa p.G314E BLCA 3 150460027 150460027 + Missense_Mutation SNP C C A TCGA-DK-A6AW-01A-11D-A30E-08 TCGA-DK-A6AW-10A-01D-A30H-08 g.chr3:150460027C>A c.876G>T c.(874-876)atG>atT p.M292I BLCA 3 150460159 150460159 + Silent SNP G G A TCGA-XF-A9SI-01A-11D-A391-08 TCGA-XF-A9SI-10A-01D-A394-08 g.chr3:150460159G>A c.744C>T c.(742-744)atC>atT p.I248I BLCA 3 150480226 150480226 + Silent SNP G G A TCGA-PQ-A6FN-01A-11D-A31L-08 TCGA-PQ-A6FN-10A-01D-A31J-08 g.chr3:150480226G>A c.411C>T c.(409-411)ccC>ccT p.P137P BLCA 3 150480449 150480451 + In_Frame_Del DEL CCG CCG - TCGA-FD-A43P-01A-31D-A23U-08 TCGA-FD-A43P-10A-01D-A23U-08 g.chr3:150480449_150480451delCCG c.186_188delCGG c.(184-189)ggcggg>ggg p.62_63GG>G COAD 3 150459937 150459937 + Missense_Mutation SNP A A C TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 g.chr3:150459937A>C c.966T>G c.(964-966)tgT>tgG p.C322W COAD 3 150460020 150460020 + Missense_Mutation SNP C C T TCGA-AA-3877-01A-01W-0995-10 TCGA-AA-3877-10A-01W-0995-10 g.chr3:150460020C>T c.883G>A c.(883-885)Gac>Aac p.D295N COAD 3 150460027 150460027 + Missense_Mutation SNP C C T TCGA-AA-3510-01A-01D-1408-10 TCGA-AA-3510-11A-01D-1408-10 g.chr3:150460027C>T c.876G>A c.(874-876)atG>atA p.M292I COAD 3 150460047 150460047 + Missense_Mutation SNP C C A TCGA-DM-A1HB-01A-21D-A183-10 TCGA-DM-A1HB-10A-01D-A183-10 g.chr3:150460047C>A c.856G>T c.(856-858)Ggt>Tgt p.G286C COAD 3 150460047 150460047 + Missense_Mutation SNP C C A TCGA-DM-A28F-01A-11D-A16V-10 TCGA-DM-A28F-10A-01D-A16V-10 g.chr3:150460047C>A c.856G>T c.(856-858)Ggt>Tgt p.G286C COAD 3 150460061 150460061 + Missense_Mutation SNP C C T TCGA-AA-3710-01A-01W-0995-10 TCGA-AA-3710-10A-01W-0995-10 g.chr3:150460061C>T c.842G>A c.(841-843)cGt>cAt p.R281H COAD 3 150460158 150460158 + Missense_Mutation SNP C C T TCGA-AA-3710-01A-01W-0995-10 TCGA-AA-3710-10A-01W-0995-10 g.chr3:150460158C>T c.745G>A c.(745-747)Gtc>Atc p.V249I COAD 3 150460159 150460159 + Silent SNP G G A TCGA-AA-3984-01A-02W-0995-10 TCGA-AA-3984-10A-01W-0999-10 g.chr3:150460159G>A c.744C>T c.(742-744)atC>atT p.I248I COAD 3 150460292 150460292 + Missense_Mutation SNP A A G TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 g.chr3:150460292A>G c.611T>C c.(610-612)gTc>gCc p.V204A COAD 3 150460378 150460378 + Silent SNP G G A TCGA-CM-5861-01A-01D-1650-10 TCGA-CM-5861-10A-01D-1650-10 g.chr3:150460378G>A c.525C>T c.(523-525)tgC>tgT p.C175C COADREAD 3 150459937 150459937 + Missense_Mutation SNP A A C TCGA-AA-A010-01A-01W-A00E-09 TCGA-AA-A010-10A-01W-A00E-09 g.chr3:150459937A>C c.966T>G c.(964-966)tgT>tgG p.C322W COADREAD 3 150460020 150460020 + Missense_Mutation SNP C C T TCGA-AA-3877-01A-01W-0995-10 TCGA-AA-3877-10A-01W-0995-10 g.chr3:150460020C>T c.883G>A c.(883-885)Gac>Aac p.D295N COADREAD 3 150460027 150460027 + Missense_Mutation SNP C C T TCGA-AA-3510-01A-01D-1408-10 TCGA-AA-3510-11A-01D-1408-10 g.chr3:150460027C>T c.876G>A c.(874-876)atG>atA p.M292I COADREAD 3 150460047 150460047 + Missense_Mutation SNP C C A TCGA-DM-A1HB-01A-21D-A183-10 TCGA-DM-A1HB-10A-01D-A183-10 g.chr3:150460047C>A c.856G>T c.(856-858)Ggt>Tgt p.G286C COADREAD 3 150460047 150460047 + Missense_Mutation SNP C C A TCGA-DM-A28F-01A-11D-A16V-10 TCGA-DM-A28F-10A-01D-A16V-10 g.chr3:150460047C>A c.856G>T c.(856-858)Ggt>Tgt p.G286C COADREAD 3 150460047 150460047 + Missense_Mutation SNP C C T TCGA-DC-6682-01A-11D-1826-10 TCGA-DC-6682-10A-01D-1826-10 g.chr3:150460047C>T c.856G>A c.(856-858)Ggt>Agt p.G286S COADREAD 3 150460061 150460061 + Missense_Mutation SNP C C T TCGA-AA-3710-01A-01W-0995-10 TCGA-AA-3710-10A-01W-0995-10 g.chr3:150460061C>T c.842G>A c.(841-843)cGt>cAt p.R281H COADREAD 3 150460158 150460158 + Missense_Mutation SNP C C T TCGA-AA-3710-01A-01W-0995-10 TCGA-AA-3710-10A-01W-0995-10 g.chr3:150460158C>T c.745G>A c.(745-747)Gtc>Atc p.V249I COADREAD 3 150460159 150460159 + Silent SNP G G A TCGA-AA-3984-01A-02W-0995-10 TCGA-AA-3984-10A-01W-0999-10 g.chr3:150460159G>A c.744C>T c.(742-744)atC>atT p.I248I COADREAD 3 150460160 150460160 + Missense_Mutation SNP A A G TCGA-EI-6507-01A-11D-1733-10 TCGA-EI-6507-10A-01D-1733-10 g.chr3:150460160A>G c.743T>C c.(742-744)aTc>aCc p.I248T COADREAD 3 150460292 150460292 + Missense_Mutation SNP A A G TCGA-AA-A00N-01A-02W-A00E-09 TCGA-AA-A00N-10A-01W-A00E-09 g.chr3:150460292A>G c.611T>C c.(610-612)gTc>gCc p.V204A COADREAD 3 150460378 150460378 + Silent SNP G G A TCGA-CM-5861-01A-01D-1650-10 TCGA-CM-5861-10A-01D-1650-10 g.chr3:150460378G>A c.525C>T c.(523-525)tgC>tgT p.C175C DLBC 3 150480589 150480589 + Silent SNP G G A TCGA-GS-A9TZ-01A-11D-A38X-10 TCGA-GS-A9TZ-10A-01D-A38X-10 g.chr3:150480589G>A c.48C>T c.(46-48)agC>agT p.S16S ESCA 3 150460351 150460351 + Silent SNP C C T TCGA-LN-A9FP-01A-31D-A387-09 TCGA-LN-A9FP-10A-01D-A38A-09 g.chr3:150460351C>T c.552G>A c.(550-552)gtG>gtA p.V184V GBMLGG 3 150480449 150480451 + In_Frame_Del DEL CCG CCG - TCGA-HT-7607-01A-11D-2086-08 TCGA-HT-7607-10A-01D-2086-08 g.chr3:150480449_150480451delCCG c.186_188delCGG c.(184-189)ggcggg>ggg p.62_63GG>G HNSC 3 150460112 150460112 + Missense_Mutation SNP C C G TCGA-CR-7388-01A-11D-2012-08 TCGA-CR-7388-10A-01D-2013-08 g.chr3:150460112C>G c.791G>C c.(790-792)aGa>aCa p.R264T HNSC 3 150460290 150460290 + Missense_Mutation SNP A A T TCGA-CN-6024-01A-11D-1683-08 TCGA-CN-6024-10A-01D-1683-08 g.chr3:150460290A>T c.613T>A c.(613-615)Ttt>Att p.F205I HNSC 3 150460311 150460311 + Missense_Mutation SNP G G T TCGA-UF-A71A-01A-22D-A34J-08 TCGA-UF-A71A-10A-01D-A34M-08 g.chr3:150460311G>T c.592C>A c.(592-594)Ctt>Att p.L198I HNSC 3 150460339 150460339 + Silent SNP G G C TCGA-CV-A45Y-01A-11D-A25D-08 TCGA-CV-A45Y-10A-01D-A25E-08 g.chr3:150460339G>C c.564C>G c.(562-564)ctC>ctG p.L188L KICH 3 150460253 150460253 + Missense_Mutation SNP T T C TCGA-KO-8403-01A-11D-2310-10 TCGA-KO-8403-11A-01D-2311-10 g.chr3:150460253T>C c.650A>G c.(649-651)gAc>gGc p.D217G KIPAN 3 150460088 150460088 + Missense_Mutation SNP C C T TCGA-B4-5377-01A-01D-1501-10 TCGA-B4-5377-10A-01D-1501-10 g.chr3:150460088C>T c.815G>A c.(814-816)cGg>cAg p.R272Q KIPAN 3 150460186 150460186 + Nonsense_Mutation SNP G G C TCGA-CJ-4882-01A-02D-1429-08 TCGA-CJ-4882-11A-01D-1429-08 g.chr3:150460186G>C c.717C>G c.(715-717)taC>taG p.Y239* KIPAN 3 150460253 150460253 + Missense_Mutation SNP T T C TCGA-KO-8403-01A-11D-2310-10 TCGA-KO-8403-11A-01D-2311-10 g.chr3:150460253T>C c.650A>G c.(649-651)gAc>gGc p.D217G KIRC 3 150460088 150460088 + Missense_Mutation SNP C C T TCGA-B4-5377-01A-01D-1501-10 TCGA-B4-5377-10A-01D-1501-10 g.chr3:150460088C>T c.815G>A c.(814-816)cGg>cAg p.R272Q KIRC 3 150460186 150460186 + Nonsense_Mutation SNP G G C TCGA-CJ-4882-01A-02D-1429-08 TCGA-CJ-4882-11A-01D-1429-08 g.chr3:150460186G>C c.717C>G c.(715-717)taC>taG p.Y239* LGG 3 150480449 150480451 + In_Frame_Del DEL CCG CCG - TCGA-HT-7607-01A-11D-2086-08 TCGA-HT-7607-10A-01D-2086-08 g.chr3:150480449_150480451delCCG c.186_188delCGG c.(184-189)ggcggg>ggg p.62_63GG>G LIHC 3 150480232 150480232 + Silent SNP C C T TCGA-WQ-AB4B-01A-11D-A40P-10 TCGA-WQ-AB4B-10A-01D-A40P-10 g.chr3:150480232C>T c.405G>A c.(403-405)ctG>ctA p.L135L LUAD 3 150459956 150459956 + Missense_Mutation SNP T T C TCGA-78-7167-01A-11D-2063-08 TCGA-78-7167-11A-01D-2063-08 g.chr3:150459956T>C c.947A>G c.(946-948)aAt>aGt p.N316S LUAD 3 150459978 150459978 + Missense_Mutation SNP C C T TCGA-17-Z033-01A-01W-0746-08 TCGA-17-Z033-11A-01W-0746-08 g.chr3:150459978C>T c.925G>A c.(925-927)Gat>Aat p.D309N LUAD 3 150460021 150460021 + Silent SNP G G A TCGA-44-6776-01A-11D-1855-08 TCGA-44-6776-10A-01D-1855-08 g.chr3:150460021G>A c.882C>T c.(880-882)agC>agT p.S294S LUAD 3 150460046 150460046 + Missense_Mutation SNP C C A TCGA-64-5781-01A-01D-1625-08 TCGA-64-5781-10A-01D-1625-08 g.chr3:150460046C>A c.857G>T c.(856-858)gGt>gTt p.G286V LUAD 3 150460262 150460262 + Missense_Mutation SNP C C A TCGA-97-8172-01A-11D-2284-08 TCGA-97-8172-10A-01D-2284-08 g.chr3:150460262C>A c.641G>T c.(640-642)gGg>gTg p.G214V LUAD 3 150460419 150460419 + Missense_Mutation SNP C C G TCGA-95-7567-01A-11D-2063-08 TCGA-95-7567-10A-01D-2063-08 g.chr3:150460419C>G c.484G>C c.(484-486)Gaa>Caa p.E162Q LUAD 3 150460469 150460469 + Missense_Mutation SNP C C A TCGA-55-A4DG-01A-11D-A24D-08 TCGA-55-A4DG-10A-01D-A24F-08 g.chr3:150460469C>A c.434G>T c.(433-435)tGt>tTt p.C145F LUSC 3 150460253 150460253 + Missense_Mutation SNP T T C TCGA-51-4079-01A-01D-1458-08 TCGA-51-4079-11A-01D-1458-08 g.chr3:150460253T>C c.650A>G c.(649-651)gAc>gGc p.D217G OV 3 150460047 150460047 + Missense_Mutation SNP C C T TCGA-13-0761-01A-01W-0370-10 TCGA-13-0761-10A-01W-0370-10 g.chr3:150460047C>T c.856G>A c.(856-858)Ggt>Agt p.G286S PAAD 3 150460089 150460089 + Missense_Mutation SNP G G A TCGA-IB-7651-01A-11D-2154-08 TCGA-IB-7651-10A-01D-2154-08 g.chr3:150460089G>A c.814C>T c.(814-816)Cgg>Tgg p.R272W PAAD 3 150460414 150460414 + Silent SNP G G A TCGA-IB-7651-01A-11D-2154-08 TCGA-IB-7651-10A-01D-2154-08 g.chr3:150460414G>A c.489C>T c.(487-489)taC>taT p.Y163Y READ 3 150460047 150460047 + Missense_Mutation SNP C C T TCGA-DC-6682-01A-11D-1826-10 TCGA-DC-6682-10A-01D-1826-10 g.chr3:150460047C>T c.856G>A c.(856-858)Ggt>Agt p.G286S READ 3 150460160 150460160 + Missense_Mutation SNP A A G TCGA-EI-6507-01A-11D-1733-10 TCGA-EI-6507-10A-01D-1733-10 g.chr3:150460160A>G c.743T>C c.(742-744)aTc>aCc p.I248T SARC 3 150480449 150480451 + In_Frame_Del DEL CCG CCG - TCGA-DX-A3UF-01A-11D-A307-09 TCGA-DX-A3UF-10A-01D-A307-09 g.chr3:150480449_150480451delCCG c.186_188delCGG c.(184-189)ggcggg>ggg p.62_63GG>G SKCM 3 150459987 150459987 + Missense_Mutation SNP G G A TCGA-D3-A5GL-06A-11D-A27K-08 TCGA-D3-A5GL-10A-01D-A27N-08 g.chr3:150459987G>A c.916C>T c.(916-918)Ctt>Ttt p.L306F SKCM 3 150460391 150460391 + Missense_Mutation SNP G G A TCGA-EE-A29E-06A-11D-A197-08 TCGA-EE-A29E-10A-01D-A199-08 g.chr3:150460391G>A c.512C>T c.(511-513)cCt>cTt p.P171L

Mutation - ICGC Project Code Chromosome Chromosome Start Chromosome End Mutation Type Mutated from Allele Mutated to Allele Consequence Type AA Mutation CDS Mutation BRCA-EU 3 150461007 150461007 single base substitution G A intron_variant BRCA-EU 3 150463480 150463480 single base substitution C G intron_variant BRCA-EU 3 150464884 150464884 single base substitution A G intron_variant BRCA-EU 3 150465593 150465593 insertion of <=200bp - A intron_variant BRCA-EU 3 150466393 150466393 single base substitution G C intron_variant BRCA-EU 3 150466579 150466579 single base substitution G A intron_variant BRCA-EU 3 150468373 150468373 single base substitution T A intron_variant BRCA-EU 3 150468393 150468393 single base substitution C T intron_variant BRCA-EU 3 150469515 150469515 single base substitution C G intron_variant BRCA-EU 3 150474718 150474718 single base substitution G C intron_variant BRCA-EU 3 150475997 150475997 single base substitution G C downstream_gene_variant BRCA-EU 3 150475997 150475997 single base substitution G C intron_variant BRCA-EU 3 150479717 150479717 deletion of <=200bp T - downstream_gene_variant BRCA-EU 3 150479717 150479717 deletion of <=200bp T - intron_variant BRCA-EU 3 150480117 150480117 single base substitution A T downstream_gene_variant BRCA-EU 3 150480117 150480117 single base substitution A T intron_variant BRCA-EU 3 150480386 150480386 single base substitution A G intron_variant BRCA-EU 3 150480386 150480386 single base substitution A G missense_variant F84S 251T>C BRCA-EU 3 150480872 150480872 single base substitution C G 5_prime_UTR_variant BRCA-EU 3 150480872 150480872 single base substitution C G intron_variant BRCA-EU 3 150482703 150482703 insertion of <=200bp - T upstream_gene_variant BRCA-EU 3 150482940 150482940 single base substitution T A upstream_gene_variant BRCA-EU 3 150483257 150483257 single base substitution G T upstream_gene_variant BRCA-EU 3 150483485 150483485 single base substitution T G upstream_gene_variant BRCA-EU 3 150483617 150483620 deletion of <=200bp TTCT - upstream_gene_variant BRCA-EU 3 150484602 150484602 single base substitution C G upstream_gene_variant BRCA-EU 3 150484738 150484738 single base substitution G A upstream_gene_variant BRCA-EU 3 150485393 150485393 single base substitution T C upstream_gene_variant BRCA-EU 3 150486128 150486128 single base substitution C T upstream_gene_variant BRCA-FR 3 150466579 150466579 single base substitution G A intron_variant BRCA-FR 3 150477349 150477349 single base substitution A C downstream_gene_variant BRCA-FR 3 150477349 150477349 single base substitution A C intron_variant BRCA-FR 3 150480872 150480872 single base substitution C G 5_prime_UTR_variant BRCA-FR 3 150480872 150480872 single base substitution C G intron_variant BRCA-FR 3 150483257 150483257 single base substitution G T upstream_gene_variant BRCA-UK 3 150466476 150466476 single base substitution G C intron_variant BRCA-UK 3 150466525 150466525 single base substitution G A intron_variant BRCA-UK 3 150466587 150466587 single base substitution G A intron_variant CLLE-ES 3 150461028 150461028 single base substitution C G intron_variant CLLE-ES 3 150483325 150483328 deletion of <=200bp TTTC - upstream_gene_variant CLLE-ES 3 150484036 150484036 single base substitution T C upstream_gene_variant COAD-US 3 150460027 150460027 single base substitution C T downstream_gene_variant COAD-US 3 150460027 150460027 single base substitution C T missense_variant M292I 876G>A COAD-US 3 150460378 150460378 single base substitution G A synonymous_variant C175C 525C>T COAD-US 3 150460378 150460378 single base substitution G A synonymous_variant C49C 147C>T COAD-US 3 150480557 150480557 single base substitution G C intron_variant COAD-US 3 150480557 150480557 single base substitution G C missense_variant P27R 80C>G COCA-CN 3 150478447 150478447 single base substitution C A downstream_gene_variant COCA-CN 3 150478447 150478447 single base substitution C A intron_variant COCA-CN 3 150480289 150480289 single base substitution G A 5_prime_UTR_variant COCA-CN 3 150480289 150480289 single base substitution G A exon_variant COCA-CN 3 150480289 150480289 single base substitution G A synonymous_variant G116G 348C>T ESAD-UK 3 150454340 150454359 deletion of <=200bp TTGGACTGGGTCAGAGGTTC - downstream_gene_variant ESAD-UK 3 150455383 150455383 single base substitution C T downstream_gene_variant ESAD-UK 3 150458298 150458298 deletion of <=200bp A - downstream_gene_variant ESAD-UK 3 150458472 150458472 single base substitution A C downstream_gene_variant ESAD-UK 3 150460922 150460922 single base substitution C T intron_variant ESAD-UK 3 150461955 150461955 single base substitution C T intron_variant ESAD-UK 3 150462497 150462497 single base substitution C G intron_variant ESAD-UK 3 150465278 150465278 single base substitution G A intron_variant ESAD-UK 3 150466083 150466083 deletion of <=200bp A - intron_variant ESAD-UK 3 150469478 150469478 single base substitution G A intron_variant ESAD-UK 3 150470477 150470477 single base substitution C T intron_variant ESAD-UK 3 150470694 150470694 single base substitution G A intron_variant ESAD-UK 3 150473694 150473694 single base substitution C T intron_variant ESAD-UK 3 150475345 150475345 single base substitution C G downstream_gene_variant ESAD-UK 3 150475345 150475345 single base substitution C G intron_variant ESAD-UK 3 150477106 150477106 single base substitution G A downstream_gene_variant ESAD-UK 3 150477106 150477106 single base substitution G A intron_variant ESAD-UK 3 150478347 150478347 single base substitution T G downstream_gene_variant ESAD-UK 3 150478347 150478347 single base substitution T G intron_variant ESAD-UK 3 150479799 150479799 single base substitution A T downstream_gene_variant ESAD-UK 3 150479799 150479799 single base substitution A T intron_variant ESAD-UK 3 150481082 150481082 single base substitution C A 5_prime_UTR_premature_start_codon_gain_variant ESAD-UK 3 150481082 150481082 single base substitution C A exon_variant ESAD-UK 3 150481082 150481082 single base substitution C A intron_variant ESAD-UK 3 150481879 150481879 single base substitution G A upstream_gene_variant ESAD-UK 3 150485691 150485691 single base substitution C T upstream_gene_variant KIRC-US 3 150460088 150460088 single base substitution C T downstream_gene_variant KIRC-US 3 150460088 150460088 single base substitution C T missense_variant R272Q 815G>A KIRC-US 3 150460186 150460186 single base substitution G C downstream_gene_variant KIRC-US 3 150460186 150460186 single base substitution G C stop_gained Y239* 717C>G LGG-US 3 150480449 150480451 deletion of <=200bp CCG - disruptive_inframe_deletion GG62G LGG-US 3 150480449 150480451 deletion of <=200bp CCG - intron_variant LICA-FR 3 150478387 150478387 single base substitution A T downstream_gene_variant LICA-FR 3 150478387 150478387 single base substitution A T intron_variant LICA-FR 3 150480434 150480456 deletion of <=200bp GACACCGGGCCGGCCCCGCCGCC - frameshift_variant GGGAGPVS61 LICA-FR 3 150480434 150480456 deletion of <=200bp GACACCGGGCCGGCCCCGCCGCC - intron_variant LIHC-US 3 150460068 150460068 single base substitution T C downstream_gene_variant LIHC-US 3 150460068 150460068 single base substitution T C missense_variant T279A 835A>G LINC-JP 3 150465351 150465351 single base substitution T A intron_variant LINC-JP 3 150466048 150466048 single base substitution C G intron_variant LIRI-JP 3 150455701 150455701 single base substitution C G downstream_gene_variant LIRI-JP 3 150458607 150458607 single base substitution G A downstream_gene_variant LIRI-JP 3 150458887 150458887 deletion of <=200bp T - downstream_gene_variant LIRI-JP 3 150459026 150459026 single base substitution C T 3_prime_UTR_variant LIRI-JP 3 150459026 150459026 single base substitution C T downstream_gene_variant LIRI-JP 3 150461453 150461453 single base substitution A G intron_variant LIRI-JP 3 150462613 150462613 single base substitution G T intron_variant LIRI-JP 3 150464284 150464284 single base substitution T C intron_variant LIRI-JP 3 150464307 150464307 single base substitution C T intron_variant LIRI-JP 3 150468518 150468518 single base substitution T C intron_variant LIRI-JP 3 150469268 150469268 single base substitution G A intron_variant LIRI-JP 3 150469707 150469707 single base substitution C T intron_variant LIRI-JP 3 150472166 150472166 single base substitution T C intron_variant LIRI-JP 3 150472389 150472389 single base substitution C A intron_variant LIRI-JP 3 150473761 150473761 single base substitution T C intron_variant LIRI-JP 3 150473840 150473840 single base substitution A C intron_variant LIRI-JP 3 150475087 150475087 single base substitution T C intron_variant LIRI-JP 3 150475170 150475172 deletion of <=200bp CAT - intron_variant LIRI-JP 3 150476194 150476194 single base substitution T C downstream_gene_variant LIRI-JP 3 150476194 150476194 single base substitution T C intron_variant LIRI-JP 3 150476254 150476254 single base substitution G C downstream_gene_variant LIRI-JP 3 150476254 150476254 single base substitution G C intron_variant LIRI-JP 3 150478708 150478708 insertion of <=200bp - A downstream_gene_variant LIRI-JP 3 150478708 150478708 insertion of <=200bp - A intron_variant LIRI-JP 3 150478715 150478715 single base substitution A G downstream_gene_variant LIRI-JP 3 150478715 150478715 single base substitution A G intron_variant LIRI-JP 3 150480043 150480043 single base substitution C T downstream_gene_variant LIRI-JP 3 150480043 150480043 single base substitution C T intron_variant LIRI-JP 3 150481905 150481905 single base substitution T A upstream_gene_variant LIRI-JP 3 150482443 150482443 single base substitution T G upstream_gene_variant LIRI-JP 3 150485033 150485033 single base substitution A G upstream_gene_variant LIRI-JP 3 150486136 150486136 single base substitution A G upstream_gene_variant LUSC-KR 3 150459294 150459294 single base substitution G A 3_prime_UTR_variant LUSC-KR 3 150459294 150459294 single base substitution G A downstream_gene_variant LUSC-KR 3 150459320 150459320 single base substitution T G 3_prime_UTR_variant LUSC-KR 3 150459320 150459320 single base substitution T G downstream_gene_variant LUSC-KR 3 150461469 150461469 single base substitution T A intron_variant LUSC-KR 3 150463170 150463170 single base substitution G C intron_variant LUSC-KR 3 150463174 150463174 single base substitution G A intron_variant LUSC-KR 3 150466361 150466361 single base substitution G C intron_variant LUSC-KR 3 150472751 150472751 single base substitution T C intron_variant LUSC-KR 3 150475242 150475242 single base substitution T A intron_variant LUSC-KR 3 150476131 150476131 single base substitution G C downstream_gene_variant LUSC-KR 3 150476131 150476131 single base substitution G C intron_variant LUSC-KR 3 150483233 150483233 single base substitution T G upstream_gene_variant LUSC-KR 3 150484688 150484688 single base substitution C T upstream_gene_variant LUSC-US 3 150460253 150460253 single base substitution T C downstream_gene_variant LUSC-US 3 150460253 150460253 single base substitution T C missense_variant D217G 650A>G MALY-DE 3 150454113 150454113 single base substitution G A downstream_gene_variant MALY-DE 3 150455997 150455997 single base substitution G T downstream_gene_variant MALY-DE 3 150457082 150457082 single base substitution C T downstream_gene_variant MALY-DE 3 150458626 150458626 single base substitution A G downstream_gene_variant MALY-DE 3 150462865 150462868 deletion of <=200bp TAAA - intron_variant MALY-DE 3 150465396 150465397 deletion of <=200bp AC - intron_variant MALY-DE 3 150471669 150471669 single base substitution T C intron_variant MALY-DE 3 150471680 150471680 single base substitution T C intron_variant MALY-DE 3 150472695 150472695 single base substitution G A intron_variant MALY-DE 3 150475271 150475271 single base substitution A T downstream_gene_variant MALY-DE 3 150475271 150475271 single base substitution A T intron_variant MALY-DE 3 150479374 150479374 single base substitution A G downstream_gene_variant MALY-DE 3 150479374 150479374 single base substitution A G intron_variant MALY-DE 3 150479437 150479437 single base substitution G C downstream_gene_variant MALY-DE 3 150479437 150479437 single base substitution G C intron_variant MALY-DE 3 150479448 150479448 single base substitution T A downstream_gene_variant MALY-DE 3 150479448 150479448 single base substitution T A intron_variant MALY-DE 3 150479449 150479449 single base substitution T A downstream_gene_variant MALY-DE 3 150479449 150479449 single base substitution T A intron_variant MALY-DE 3 150479704 150479704 single base substitution G C downstream_gene_variant MALY-DE 3 150479704 150479704 single base substitution G C intron_variant MALY-DE 3 150479920 150479920 single base substitution G A downstream_gene_variant MALY-DE 3 150479920 150479920 single base substitution G A intron_variant MALY-DE 3 150479923 150479923 single base substitution C G downstream_gene_variant MALY-DE 3 150479923 150479923 single base substitution C G intron_variant MALY-DE 3 150479968 150479968 single base substitution C G downstream_gene_variant MALY-DE 3 150479968 150479968 single base substitution C G intron_variant MALY-DE 3 150479980 150479980 single base substitution A G downstream_gene_variant MALY-DE 3 150479980 150479980 single base substitution A G intron_variant MALY-DE 3 150479987 150479987 single base substitution A C downstream_gene_variant MALY-DE 3 150479987 150479987 single base substitution A C intron_variant MALY-DE 3 150480033 150480033 single base substitution C A downstream_gene_variant MALY-DE 3 150480033 150480033 single base substitution C A intron_variant MALY-DE 3 150480096 150480096 single base substitution C G downstream_gene_variant MALY-DE 3 150480096 150480096 single base substitution C G intron_variant MALY-DE 3 150480194 150480194 single base substitution G A downstream_gene_variant MALY-DE 3 150480194 150480194 single base substitution G A intron_variant MALY-DE 3 150480195 150480195 single base substitution G A downstream_gene_variant MALY-DE 3 150480195 150480195 single base substitution G A intron_variant MALY-DE 3 150480220 150480220 single base substitution C G downstream_gene_variant MALY-DE 3 150480220 150480220 single base substitution C G missense_variant K139N 417G>C MALY-DE 3 150480220 150480220 single base substitution C G missense_variant K13N 39G>C MALY-DE 3 150480239 150480239 single base substitution G T downstream_gene_variant MALY-DE 3 150480239 150480239 single base substitution G T missense_variant A133E 398C>A MALY-DE 3 150480239 150480239 single base substitution G T missense_variant A7E 20C>A MALY-DE 3 150480272 150480272 single base substitution A G 5_prime_UTR_variant MALY-DE 3 150480272 150480272 single base substitution A G exon_variant MALY-DE 3 150480272 150480272 single base substitution A G missense_variant I122T 365T>C MALY-DE 3 150480331 150480331 single base substitution G C 5_prime_UTR_variant MALY-DE 3 150480331 150480331 single base substitution G C exon_variant MALY-DE 3 150480331 150480331 single base substitution G C missense_variant N102K 306C>G MALY-DE 3 150480335 150480335 single base substitution C T 5_prime_UTR_variant MALY-DE 3 150480335 150480335 single base substitution C T exon_variant MALY-DE 3 150480335 150480335 single base substitution C T missense_variant C101Y 302G>A MALY-DE 3 150480358 150480358 single base substitution C A missense_variant Q93H 279G>T MALY-DE 3 150480358 150480358 single base substitution C A splice_acceptor_variant MALY-DE 3 150480370 150480370 single base substitution A C intron_variant MALY-DE 3 150480370 150480370 single base substitution A C synonymous_variant P89P 267T>G MALY-DE 3 150480562 150480562 single base substitution G A intron_variant MALY-DE 3 150480562 150480562 single base substitution G A synonymous_variant H25H 75C>T MALY-DE 3 150480988 150480988 single base substitution C A 5_prime_UTR_variant MALY-DE 3 150480988 150480988 single base substitution C A exon_variant MALY-DE 3 150480988 150480988 single base substitution C A intron_variant MALY-DE 3 150481064 150481064 single base substitution G T 5_prime_UTR_premature_start_codon_gain_variant MALY-DE 3 150481064 150481064 single base substitution G T exon_variant MALY-DE 3 150481064 150481064 single base substitution G T intron_variant MALY-DE 3 150481541 150481541 single base substitution C T upstream_gene_variant MALY-DE 3 150481620 150481620 single base substitution C G upstream_gene_variant MALY-DE 3 150481724 150481724 single base substitution G C upstream_gene_variant MALY-DE 3 150481945 150481945 single base substitution T C upstream_gene_variant MALY-DE 3 150482017 150482017 single base substitution G A upstream_gene_variant MALY-DE 3 150482612 150482612 single base substitution G A upstream_gene_variant MALY-DE 3 150484597 150484597 single base substitution T A upstream_gene_variant MALY-DE 3 150485319 150485319 single base substitution C T upstream_gene_variant MELA-AU 3 150454597 150454597 single base substitution G A downstream_gene_variant MELA-AU 3 150454688 150454688 single base substitution G A downstream_gene_variant MELA-AU 3 150454732 150454732 single base substitution G A downstream_gene_variant MELA-AU 3 150454885 150454885 single base substitution G A downstream_gene_variant MELA-AU 3 150455147 150455147 single base substitution C A downstream_gene_variant MELA-AU 3 150456615 150456615 single base substitution G A downstream_gene_variant MELA-AU 3 150456771 150456772 multiple base substitution (>=2bp and <=200bp) CC AT downstream_gene_variant MELA-AU 3 150456924 150456924 single base substitution A T downstream_gene_variant MELA-AU 3 150458686 150458686 single base substitution C T downstream_gene_variant MELA-AU 3 150458761 150458761 single base substitution G A downstream_gene_variant MELA-AU 3 150461410 150461410 single base substitution G A intron_variant MELA-AU 3 150462043 150462043 single base substitution G A intron_variant MELA-AU 3 150462139 150462139 single base substitution G A intron_variant MELA-AU 3 150462240 150462240 single base substitution G A intron_variant MELA-AU 3 150463535 150463535 single base substitution G A intron_variant MELA-AU 3 150463660 150463660 single base substitution G A intron_variant MELA-AU 3 150465349 150465349 single base substitution G C intron_variant MELA-AU 3 150466650 150466651 multiple base substitution (>=2bp and <=200bp) CC TA intron_variant MELA-AU 3 150467332 150467332 single base substitution G A intron_variant MELA-AU 3 150468298 150468298 single base substitution G A intron_variant MELA-AU 3 150468452 150468452 single base substitution A T intron_variant MELA-AU 3 150468509 150468509 single base substitution G A intron_variant MELA-AU 3 150468660 150468660 single base substitution G A intron_variant MELA-AU 3 150469160 150469160 single base substitution G A intron_variant MELA-AU 3 150470290 150470290 single base substitution G A intron_variant MELA-AU 3 150470802 150470802 single base substitution A G intron_variant MELA-AU 3 150470862 150470862 single base substitution A T intron_variant MELA-AU 3 150471069 150471069 single base substitution G A intron_variant MELA-AU 3 150471442 150471442 single base substitution C T intron_variant MELA-AU 3 150471998 150471998 single base substitution G A intron_variant MELA-AU 3 150472286 150472286 single base substitution G A intron_variant MELA-AU 3 150472993 150472993 single base substitution G A intron_variant MELA-AU 3 150473265 150473265 single base substitution G A intron_variant MELA-AU 3 150473326 150473326 single base substitution G A intron_variant MELA-AU 3 150473524 150473524 single base substitution G A intron_variant MELA-AU 3 150473529 150473529 single base substitution C T intron_variant MELA-AU 3 150473620 150473620 single base substitution G A intron_variant MELA-AU 3 150474160 150474160 single base substitution T C intron_variant MELA-AU 3 150474757 150474757 single base substitution T A intron_variant MELA-AU 3 150476099 150476099 single base substitution G A downstream_gene_variant MELA-AU 3 150476099 150476099 single base substitution G A intron_variant MELA-AU 3 150476883 150476884 multiple base substitution (>=2bp and <=200bp) GG AA downstream_gene_variant MELA-AU 3 150476883 150476884 multiple base substitution (>=2bp and <=200bp) GG AA intron_variant MELA-AU 3 150477434 150477434 single base substitution A T downstream_gene_variant MELA-AU 3 150477434 150477434 single base substitution A T intron_variant MELA-AU 3 150481041 150481041 single base substitution G A 5_prime_UTR_variant MELA-AU 3 150481041 150481041 single base substitution G A exon_variant MELA-AU 3 150481041 150481041 single base substitution G A intron_variant MELA-AU 3 150481232 150481233 multiple base substitution (>=2bp and <=200bp) CC TT exon_variant MELA-AU 3 150481232 150481233 multiple base substitution (>=2bp and <=200bp) CC TT upstream_gene_variant MELA-AU 3 150482055 150482056 multiple base substitution (>=2bp and <=200bp) CC TT upstream_gene_variant MELA-AU 3 150483260 150483260 single base substitution G A upstream_gene_variant MELA-AU 3 150483329 150483329 single base substitution T C upstream_gene_variant MELA-AU 3 150483572 150483572 single base substitution C T upstream_gene_variant MELA-AU 3 150483886 150483887 multiple base substitution (>=2bp and <=200bp) CC TG upstream_gene_variant MELA-AU 3 150484254 150484254 single base substitution C T upstream_gene_variant MELA-AU 3 150484454 150484454 single base substitution G A upstream_gene_variant MELA-AU 3 150485504 150485504 single base substitution C T upstream_gene_variant MELA-AU 3 150486092 150486092 single base substitution T A upstream_gene_variant MELA-AU 3 150486158 150486158 single base substitution C T upstream_gene_variant MELA-AU 3 150486179 150486179 single base substitution G A upstream_gene_variant ORCA-IN 3 150455594 150455594 deletion of <=200bp T - downstream_gene_variant ORCA-IN 3 150472172 150472172 single base substitution G A intron_variant ORCA-IN 3 150473656 150473656 single base substitution C G intron_variant ORCA-IN 3 150474000 150474000 single base substitution C G intron_variant ORCA-IN 3 150480260 150480260 single base substitution G T 5_prime_UTR_variant ORCA-IN 3 150480260 150480260 single base substitution G T exon_variant ORCA-IN 3 150480260 150480260 single base substitution G T missense_variant A126D 377C>A OV-AU 3 150455324 150455324 single base substitution A C downstream_gene_variant OV-AU 3 150465277 150465277 single base substitution C T intron_variant OV-AU 3 150469491 150469491 single base substitution A G intron_variant OV-AU 3 150480168 150480168 single base substitution C T downstream_gene_variant OV-AU 3 150480168 150480168 single base substitution C T intron_variant OV-AU 3 150480926 150480926 single base substitution A C 5_prime_UTR_variant OV-AU 3 150480926 150480926 single base substitution A C intron_variant OV-AU 3 150480926 150480926 single base substitution A C splice_donor_variant PACA-AU 3 150460388 150460388 single base substitution C A missense_variant G172V 515G>T PACA-AU 3 150460388 150460388 single base substitution C A missense_variant G46V 137G>T PACA-AU 3 150467717 150467717 single base substitution C T intron_variant PACA-AU 3 150471781 150471781 single base substitution G T intron_variant PACA-AU 3 150475660 150475660 single base substitution C G downstream_gene_variant PACA-AU 3 150475660 150475660 single base substitution C G intron_variant PACA-AU 3 150477840 150477840 single base substitution C G downstream_gene_variant PACA-AU 3 150477840 150477840 single base substitution C G intron_variant PACA-AU 3 150477919 150477919 single base substitution G A downstream_gene_variant PACA-AU 3 150477919 150477919 single base substitution G A intron_variant PACA-AU 3 150478550 150478550 single base substitution G A downstream_gene_variant PACA-AU 3 150478550 150478550 single base substitution G A intron_variant PACA-AU 3 150484557 150484557 single base substitution T G upstream_gene_variant PACA-AU 3 150485737 150485737 single base substitution G T upstream_gene_variant PACA-CA 3 150457522 150457522 single base substitution A C downstream_gene_variant PACA-CA 3 150461377 150461377 deletion of <=200bp G - intron_variant PACA-CA 3 150463347 150463347 single base substitution A C intron_variant PACA-CA 3 150464689 150464689 single base substitution G A intron_variant PACA-CA 3 150469988 150469988 single base substitution A T intron_variant PACA-CA 3 150472025 150472025 single base substitution C T intron_variant PACA-CA 3 150475851 150475864 deletion of <=200bp TCCCATTTAGAAAG - downstream_gene_variant PACA-CA 3 150475851 150475864 deletion of <=200bp TCCCATTTAGAAAG - intron_variant PACA-CA 3 150479717 150479717 deletion of <=200bp T - downstream_gene_variant PACA-CA 3 150479717 150479717 deletion of <=200bp T - intron_variant PACA-CA 3 150482283 150482283 single base substitution A T upstream_gene_variant PACA-CA 3 150483415 150483415 single base substitution C G upstream_gene_variant PACA-CA 3 150485908 150485908 single base substitution C G upstream_gene_variant PBCA-DE 3 150454088 150454088 single base substitution A G downstream_gene_variant PBCA-DE 3 150468232 150468232 insertion of <=200bp - A intron_variant PBCA-DE 3 150470402 150470402 insertion of <=200bp - A intron_variant PRAD-CA 3 150458574 150458574 single base substitution C T downstream_gene_variant PRAD-CA 3 150481061 150481061 single base substitution C A 5_prime_UTR_variant PRAD-CA 3 150481061 150481061 single base substitution C A exon_variant PRAD-CA 3 150481061 150481061 single base substitution C A intron_variant PRAD-UK 3 150461841 150461841 single base substitution T C intron_variant PRAD-UK 3 150462214 150462214 single base substitution C G intron_variant PRAD-UK 3 150481114 150481114 single base substitution G A 5_prime_UTR_premature_start_codon_gain_variant PRAD-UK 3 150481114 150481114 single base substitution G A exon_variant PRAD-UK 3 150481114 150481114 single base substitution G A intron_variant READ-US 3 150460067 150460067 single base substitution G A downstream_gene_variant READ-US 3 150460067 150460067 single base substitution G A missense_variant T279M 836C>T RECA-EU 3 150462283 150462283 single base substitution T A intron_variant RECA-EU 3 150463637 150463637 single base substitution G T intron_variant RECA-EU 3 150465438 150465438 single base substitution G A intron_variant RECA-EU 3 150465439 150465439 single base substitution G C intron_variant RECA-EU 3 150466505 150466505 single base substitution T C intron_variant RECA-EU 3 150474750 150474750 single base substitution G A intron_variant RECA-EU 3 150477418 150477418 single base substitution G A downstream_gene_variant RECA-EU 3 150477418 150477418 single base substitution G A intron_variant SKCA-BR 3 150454688 150454688 single base substitution G A downstream_gene_variant SKCA-BR 3 150464205 150464205 single base substitution C T intron_variant SKCA-BR 3 150465357 150465357 single base substitution C T intron_variant SKCA-BR 3 150465810 150465810 single base substitution C A intron_variant SKCA-BR 3 150467275 150467275 single base substitution A T intron_variant SKCA-BR 3 150468166 150468166 single base substitution G A intron_variant SKCA-BR 3 150475643 150475643 single base substitution G A downstream_gene_variant SKCA-BR 3 150475643 150475643 single base substitution G A intron_variant SKCA-BR 3 150476356 150476356 insertion of <=200bp - AT downstream_gene_variant SKCA-BR 3 150476356 150476356 insertion of <=200bp - AT intron_variant SKCA-BR 3 150483328 150483328 single base substitution C T upstream_gene_variant SKCA-BR 3 150484059 150484059 single base substitution T C upstream_gene_variant SKCM-US 3 150460058 150460058 single base substitution G A downstream_gene_variant SKCM-US 3 150460058 150460058 single base substitution G A missense_variant S282L 845C>T SKCM-US 3 150460391 150460391 single base substitution G A missense_variant P171L 512C>T SKCM-US 3 150460391 150460391 single base substitution G A missense_variant P45L 134C>T STAD-US 3 150460021 150460021 single base substitution G A downstream_gene_variant STAD-US 3 150460021 150460021 single base substitution G A synonymous_variant S294S 882C>T STAD-US 3 150460058 150460058 single base substitution G A downstream_gene_variant STAD-US 3 150460058 150460058 single base substitution G A missense_variant S282L 845C>T STAD-US 3 150460061 150460061 single base substitution C T downstream_gene_variant STAD-US 3 150460061 150460061 single base substitution C T missense_variant R281H 842G>A STAD-US 3 150460067 150460067 single base substitution G A downstream_gene_variant STAD-US 3 150460067 150460067 single base substitution G A missense_variant T279M 836C>T STAD-US 3 150460122 150460122 single base substitution A C downstream_gene_variant STAD-US 3 150460122 150460122 single base substitution A C missense_variant F261V 781T>G STAD-US 3 150460129 150460129 single base substitution G A downstream_gene_variant STAD-US 3 150460129 150460129 single base substitution G A synonymous_variant A258A 774C>T STAD-US 3 150460290 150460290 single base substitution A C missense_variant F205V 613T>G STAD-US 3 150460290 150460290 single base substitution A C missense_variant F79V 235T>G STAD-US 3 150460413 150460413 single base substitution G A missense_variant R164C 490C>T STAD-US 3 150460413 150460413 single base substitution G A missense_variant R38C 112C>T STAD-US 3 150460455 150460455 single base substitution G A missense_variant H150Y 448C>T STAD-US 3 150460455 150460455 single base substitution G A missense_variant H24Y 70C>T STAD-US 3 150480301 150480301 single base substitution C T 5_prime_UTR_variant STAD-US 3 150480301 150480301 single base substitution C T exon_variant STAD-US 3 150480301 150480301 single base substitution C T synonymous_variant P112P 336G>A STAD-US 3 150480304 150480304 single base substitution G A 5_prime_UTR_variant STAD-US 3 150480304 150480304 single base substitution G A exon_variant STAD-US 3 150480304 150480304 single base substitution G A synonymous_variant C111C 333C>T THCA-SA 3 150459193 150459193 single base substitution G A 3_prime_UTR_variant THCA-SA 3 150459193 150459193 single base substitution G A downstream_gene_variant UCEC-US 3 150460066 150460066 single base substitution C T downstream_gene_variant UCEC-US 3 150460066 150460066 single base substitution C T synonymous_variant T279T 837G>A UCEC-US 3 150460072 150460072 single base substitution C T downstream_gene_variant UCEC-US 3 150460072 150460072 single base substitution C T synonymous_variant E277E 831G>A UCEC-US 3 150460186 150460186 single base substitution G A downstream_gene_variant UCEC-US 3 150460186 150460186 single base substitution G A synonymous_variant Y239Y 717C>T UCEC-US 3 150460266 150460266 single base substitution G A downstream_gene_variant UCEC-US 3 150460266 150460266 single base substitution G A missense_variant P213S 637C>T UCEC-US 3 150460461 150460461 single base substitution T C missense_variant T148A 442A>G UCEC-US 3 150460461 150460461 single base substitution T C missense_variant T22A 64A>G UCEC-US 3 150480234 150480234 single base substitution G T downstream_gene_variant UCEC-US 3 150480234 150480234 single base substitution G T missense_variant L135M 403C>A UCEC-US 3 150480234 150480234 single base substitution G T missense_variant L9M 25C>A UCEC-US 3 150480319 150480319 single base substitution C T 5_prime_UTR_variant UCEC-US 3 150480319 150480319 single base substitution C T exon_variant UCEC-US 3 150480319 150480319 single base substitution C T synonymous_variant Q106Q 318G>A UCEC-US 3 150480349 150480349 single base substitution G T 5_prime_UTR_variant UCEC-US 3 150480349 150480349 single base substitution G T exon_variant UCEC-US 3 150480349 150480349 single base substitution G T synonymous_variant A96A 288C>A

Mutation - COSMIC Sample Name Mutation ID Mutation CDS Mutation AA Mutation Description Mutation Genome Position Mutation Strand TCGA-BR-4184-01 COSM4114414 c.490C>T p.R164C Substitution - Missense 3:150742626-150742626 - CSCC-38-T COSM4548794 c.456G>A p.T152T Substitution - coding silent 3:150742660-150742660 - TCGA-BS-A0UV-01 COSM1039894 c.318G>A p.Q106Q Substitution - coding silent 3:150762532-150762532 - DLD1 COSM3003163 c.960T>C p.S320S Substitution - coding silent 3:150742156-150742156 - TCGA-AX-A0J1-01 COSM1039891 c.637C>T p.P213S Substitution - Missense 3:150742479-150742479 - pfg043T COSM4762531 c.695T>A p.V232E Substitution - Missense 3:150742421-150742421 - TCGA-CJ-4882-01 COSM479577 c.717C>G p.Y239* Substitution - Nonsense 3:150742399-150742399 - HCT8 COSM3003163 c.960T>C p.S320S Substitution - coding silent 3:150742156-150742156 - tumor_4163639 COSM1161447 c.279G>T p.Q93H Substitution - Missense 3:150762571-150762571 - TCGA-HU-A4GH-01 COSM4114411 c.781T>G p.F261V Substitution - Missense 3:150742335-150742335 - 8066491 COSM3784359 c.515G>T p.G172V Substitution - Missense 3:150742601-150742601 - IPMN21 COSM248857 c.176G>A p.G59D Substitution - Missense 3:150762674-150762674 - TCGA-CD-A4MJ-01 COSM3427204 c.836C>T p.T279M Substitution - Missense 3:150742280-150742280 - TCGA-13-0761-01 COSM78485 c.856G>A p.G286S Substitution - Missense 3:150742260-150742260 - TCGA-CM-5861-01 COSM1419909 c.525C>T p.C175C Substitution - coding silent 3:150742591-150742591 - TCGA-HU-A4G9-01 COSM4114417 c.333C>T p.C111C Substitution - coding silent 3:150762517-150762517 - LB647-SCLC COSM23106 c.743T>A p.I248N Substitution - Missense 3:150742373-150742373 - TCGA-CG-5723-01 COSM206345 c.842G>A p.R281H Substitution - Missense 3:150742274-150742274 - TCGA-FP-A4BE-01 COSM4114415 c.448C>T p.H150Y Substitution - Missense 3:150742668-150742668 - 2492730 COSM5725592 c.609C>T p.I203I Substitution - coding silent 3:150742507-150742507 - Pat_41_B COSM5863742 c.83C>T p.S28F Substitution - Missense 3:150762767-150762767 - MO_1232 COSM5549253 c.741C>A p.A247A Substitution - coding silent 3:150742375-150742375 - 2492728 COSM5725592 c.609C>T p.I203I Substitution - coding silent 3:150742507-150742507 - TCGA-BR-8382-01 COSM206345 c.842G>A p.R281H Substitution - Missense 3:150742274-150742274 - TCGA-AA-A00N-01 COSM277269 c.611T>C p.V204A Substitution - Missense 3:150742505-150742505 - YUKLAB COSM1693589 c.677G>C p.G226A Substitution - Missense 3:150742439-150742439 - OSCC-GB_00560111 COSM4883608 c.377C>A p.A126D Substitution - Missense 3:150762473-150762473 - tumor_4163639 COSM1161446 c.417G>C p.K139N Substitution - Missense 3:150762433-150762433 - TCGA-B7-5818-01 COSM4114413 c.613T>G p.F205V Substitution - Missense 3:150742503-150742503 - 2492727 COSM5725592 c.609C>T p.I203I Substitution - coding silent 3:150742507-150742507 - YURAY COSM3003170 c.687C>T p.F229F Substitution - coding silent 3:150742429-150742429 - TCGA-K7-A5RG-01 COSM4930067 c.835A>G p.T279A Substitution - Missense 3:150742281-150742281 - PD23554a COSM5795483 c.251T>C p.F84S Substitution - Missense 3:150762599-150762599 - HCT15 COSM3003163 c.960T>C p.S320S Substitution - coding silent 3:150742156-150742156 - TCGA-AX-A0J1-01 COSM1039890 c.717C>T p.Y239Y Substitution - coding silent 3:150742399-150742399 - TCGA-FI-A2EX-01 COSM1039889 c.831G>A p.E277E Substitution - coding silent 3:150742285-150742285 - TCGA-EI-6917-01 COSM3427204 c.836C>T p.T279M Substitution - Missense 3:150742280-150742280 - sysucc-880T COSM5463218 c.348C>T p.G116G Substitution - coding silent 3:150762502-150762502 - TCGA-B4-5377-01 COSM479576 c.815G>A p.R272Q Substitution - Missense 3:150742301-150742301 - T3535 COSM4725971 c.427A>G p.T143A Substitution - Missense 3:150742689-150742689 - TCGA-AP-A0LM-01 COSM1039893 c.403C>A p.L135M Substitution - Missense 3:150762447-150762447 - tumor_4160468 COSM3357656 c.398C>A p.A133E Substitution - Missense 3:150762452-150762452 - Pat_14_A COSM5863741 c.592C>A p.L198I Substitution - Missense 3:150742524-150742524 - TCGA-BR-8680-01 COSM3588662 c.845C>T p.S282L Substitution - Missense 3:150742271-150742271 - 445 COSM4434895 c.592C>T p.L198F Substitution - Missense 3:150742524-150742524 - 61 COSM5736792 c.677G>T p.G226V Substitution - Missense 3:150742439-150742439 - TCGA-CG-4442-01 COSM4114412 c.774C>T p.A258A Substitution - coding silent 3:150742342-150742342 - TCGA-B5-A11E-01 COSM1039888 c.837G>A p.T279T Substitution - coding silent 3:150742279-150742279 - TCGA-BR-6452-01 COSM581927 c.882C>T p.S294S Substitution - coding silent 3:150742234-150742234 - TCGA-AU-6004-01 COSM3695866 c.80C>G p.P27R Substitution - Missense 3:150762770-150762770 - TCGA-EE-A29E-06 COSM3588663 c.512C>T p.P171L Substitution - Missense 3:150742604-150742604 - TCGA-D1-A17R-01 COSM1039895 c.288C>A p.A96A Substitution - coding silent 3:150762562-150762562 - TCGA-AA-3510-01 COSM1419907 c.876G>A p.M292I Substitution - Missense 3:150742240-150742240 - TCGA-51-4079-01 COSM728746 c.650A>G p.D217G Substitution - Missense 3:150742466-150742466 - TCGA-AA-A010-01 COSM284980 c.966T>G p.C322W Substitution - Missense 3:150742150-150742150 - 101 COSM5014384 c.293A>G p.H98R Substitution - Missense 3:150762557-150762557 - SC_9097 COSM5550827 c.312C>T p.C104C Substitution - coding silent 3:150762538-150762538 - LUAD-YINHD COSM388528 c.753C>G p.L251L Substitution - coding silent 3:150742363-150742363 - TCGA-CG-5730-01 COSM4114416 c.336G>A p.P112P Substitution - coding silent 3:150762514-150762514 - TCGA-BS-A0UV-01 COSM1039892 c.442A>G p.T148A Substitution - Missense 3:150742674-150742674 - 2492729 COSM5725592 c.609C>T p.I203I Substitution - coding silent 3:150742507-150742507 - 18 COSM5744793 c.866C>T p.A289V Substitution - Missense 3:150742250-150742250 - CHC1201T COSM5347829 c.181_203del23 p.G61fs*17 Deletion - Frameshift 3:150762647-150762669 - TCGA-EB-A430-01 COSM3588662 c.845C>T p.S282L Substitution - Missense 3:150742271-150742271 - TCGA-D1-A169-01 COSM1039887 c.943A>G p.I315V Substitution - Missense 3:150742173-150742173 -

Mutation - CGAP UNIGENE CYTOBAND OMIM SNP Hs.477921;Hs.477959 3q25 602213 2480778|CGAP|BC013082|C/T|non-coding||2039|Candidate; 1515897|dbSNP|BC013082|C/T|non-coding||2039|Validated; 1515964|dbSNP|BC013082|A/C|non-coding||2227|Validated

Mutation - IntOGen Mutated from(ref) Mutated to(alt) Consequence Type AA Mutation CDS Mutation Chr Pos Cancer A C Missense p.F205V c.613T>G 3 150460290 STAD A - IntronicDeletion . c.417+8627delT 3 150471593 CM A T Missense p.F205I c.613T>A 3 150460290 HNSC C A Missense p.G286V c.857G>T 3 150460046 LUAD C A Missense p.Q93H c.279G>T 3 150480358 DLBCL CCG - InFrameDeletion p.G63delG c.186_188delCGG 3 150480449 LGG C G Missense p.K139N c.417G>C 3 150480220 DLBCL C T Missense p.D309N c.925G>A 3 150459978 LUAD C T Missense p.G286S c.856G>A 3 150460047 OV C T Missense p.R272Q c.815G>A 3 150460088 RCCC C T Synonymous p.E277E c.831G>A 3 150460072 UCEC C T Synonymous p.P112P c.336G>A 3 150480301 CM C T Synonymous p.P112P c.336G>A 3 150480301 STAD G A Synonymous p.I203I c.609C>T 3 150460294 CM G A Synonymous p.S294S c.882C>T 3 150460021 LUAD G C Nonsense p.Y239* c.717C>G 3 150460186 RCCC G T Synonymous p.A96A c.288C>A 3 150480349 UCEC T C Missense p.D217G c.650A>G 3 150460253 LUSC