DNA & RNA Element - UTRdb Gene Name Type ASPicDB UTRaspic Refseq ID Genome USP18 3'UTR 06741bd4d4 BA117428 NM_017414 chr22:17039585-17040164:+ USP18 3'UTR d93fe24a77 BA117429 NM_017414 chr22:17059161-17060285:+ USP18 3'UTR 6382c443b4 BA117430 NM_017414 chr22:17059161-17060285:+ USP18 3'UTR e2f397c59c BA117431 NM_017414 chr22:17039585-17040160:+ USP18 3'UTR c470f783fd BA117432 NM_017414 chr22:17059161-17060285:+ USP18 3'UTR 3cd31470cf BA117433 NM_017414 chr22:17039585-17040160:+ USP18 5'UTR 06741bd4d4 CA184400 NM_017414 chr22:17012758-17020430:+ USP18 5'UTR d93fe24a77 CA184401 NM_017414 chr22:17012641-17020430:+ USP18 5'UTR 6382c443b4 CA184402 NM_017414 chr22:17027596-17030722:+ USP18 5'UTR e2f397c59c CA184403 NM_017414 chr22:17027596-17030722:+ USP18 5'UTR c470f783fd CA184404 NM_017414 chr22:17029682-17030722:+ USP18 5'UTR 3cd31470cf CA184405 NM_017414 chr22:17029682-17030722:+

DNA & RNA Element - AREsite Gene Name Motif CDS Area ARE Area Evidence USP18; ISG43 ATTTA 431-1549 1679-1683;2043-2047;2058-2062 USP18; ISG43 WTATTTATW 431-1549 1677-1685;2056-2064 USP18; ISG43 WWATTTAWW 431-1549 1677-1685;2056-2064

DNA & RNA Element - circBase circRNA ID Chrom Start End Strand hsa_circ_0062195 chr22 18655916 18656609 + hsa_circ_0062192 chr22 18632757 18650101 + hsa_circ_0062193 chr22 18632757 18656609 + hsa_circ_0062194 chr22 18642938 18653687 +

DNA & RNA Element - circRNADb circRNA ID Chrom Start End Strand Samples hsa_circ_29069 chr22 18650021 18653687 + leukemia

DNA & RNA Element - CircNet Circ ID GITPosition Express Symbol Entrez Category Strand Refered Name hsa-circ-USP18.1 NM_017414Tchr22:18650021-18653687 expressed USP18 11274 protein-coding + not_available hsa-circ-USP18.2 NM_017414Tchr22:18632757-18656609 expressed USP18 11274 protein-coding + hsa_circ_0062193 hsa-circ-USP18.3 NM_017414Tchr22:18632757-18650101 expressed USP18 11274 protein-coding + hsa_circ_0062192 hsa-circ-USP18.4 NM_017414Tchr22:18642938-18653687 expressed USP18 11274 protein-coding + hsa_circ_0062194 hsa-circ-USP18.5 NM_017414Tchr22:18655916-18656609 expressed USP18 11274 protein-coding + hsa_circ_0062195 hsa-circ-USP18.6 NM_017414Tchr22:18642938-18650101 expressed USP18 11274 protein-coding x chr22:18642938-18650101_GM12878_poly(A)- hsa-circ-USP18.7 NM_017414Tchr22:18640324-18643035 expressed USP18 11274 protein-coding + not_available

DNA & RNA Element - miRTarBase Target Gene (Entrez ID) miRTarBase ID miRNA Species (miRNA) Target Gene Species (Target Gene) Experiments Support Type References (PMID) MIRT003365 hsa-miR-221-3p Homo sapiens USP18 11274 Homo sapiens Reporter assay;Microarray Non-Functional MTI 20018759 MIRT024799 hsa-miR-215-5p Homo sapiens USP18 11274 Homo sapiens Microarray Functional MTI (Weak) 19074876 MIRT026176 hsa-miR-192-5p Homo sapiens USP18 11274 Homo sapiens Microarray Functional MTI (Weak) 19074876 MIRT028905 hsa-miR-26b-5p Homo sapiens USP18 11274 Homo sapiens Microarray Functional MTI (Weak) 19088304

DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0004481 hsa-let-7a* 11274 USP18 cuuucugucaUCU-AACAUAUc ||| ||||||| ugcugugaccAGACUUGUAUAc 2 12 385 406 [hg19:22:18659969-18659990:+] 0.5614 146 7 -8.51 -0.2481 MIMAT0004482 hsa-let-7b* 11274 USP18 cccuuccgucauccAACAUAUc ||||||| ugcugugaccagacUUGUAUAc 2 9 385 406 [hg19:22:18659969-18659990:+] 0.5614 140 7 -6.59 -0.2481 MIMAT0004486 hsa-let-7f-1* 11274 USP18 cccuuccguuaUCU-AACAUAUc ||| ||||||| cugcugugaccAGACUUGUAUAc 2 12 384 406 [hg19:22:18659968-18659990:+] 0.5614 146 7 -6.60 -0.2503 MIMAT0004490 hsa-miR-19a* 11274 USP18 acaucACGUUGAUACGUUUUGa || || |: |||||| -----UGGAAAUGCCCAAAACc 2 18 1 17 [hg19:22:18659585-18659601:+] 0.6499 125 6 -6.72 -0.2028 MIMAT0004491 hsa-miR-19b-1* 11274 USP18 cgaccuACGUUUGGACGUUUUGa || |||: |||||| ------UGGAAAUGCCCAAAACc 2 18 1 17 [hg19:22:18659585-18659601:+] 0.6499 125 6 -9.81 -0.2010 MIMAT0004492 hsa-miR-19b-2* 11274 USP18 acuuuACGUUUGGACGUUUUGa || |||: |||||| -----UGGAAAUGCCCAAAACc 2 18 1 17 [hg19:22:18659585-18659601:+] 0.6499 125 6 -11.49 -0.2010 MIMAT0004503 hsa-miR-29a* 11274 USP18 gaCUUGUGGUUUUCUU-UAGUCa | |:||::: ||| ||||| uuGUAUACUGGCUGAAUAUCAGu 2 21 399 421 [hg19:22:18659983-18660005:+] 0.5614 124 0 -15.12 -0.4753 MIMAT0004506 hsa-miR-33a* 11274 USP18 cacuacgugacaccuUUGUAAc |||||| uucacuuugagaaccAACAUUa 2 8 436 457 [hg19:22:18660020-18660041:+] 0.5669 120 6 -9.70 -0.1300 MIMAT0004509 hsa-miR-93* 11274 USP18 gcccuucacGAUCGAGUCGUca :|| :|||||| gcuauucauUUA-UUCAGCAaa 3 14 487 507 [hg19:22:18660071-18660091:+] 0.6412 123 0 -8.41 -0.5717 MIMAT0004509 hsa-miR-93* 11274 USP18 gcccUUCACGAUCGAGUC-GUCa |:|| || | |||| ||| ccucAGGUCCU-GAUCAGUCAGa 2 19 173 194 [hg19:22:18659757-18659778:+] 0.5529 120 0 -12.50 -0.5365 MIMAT0004514 hsa-miR-29b-1* 11274 USP18 agAUUUGGUGGUAUACUUUG-GUCg |||: :| ::|: |||| ||| caUAAGAUAGUGUGAUAAACACAGu 2 23 530 554 [hg19:22:18660114-18660138:+] 0.6889 122 0 -11.47 -1.0660 MIMAT0009196 hsa-miR-103-2* 11274 USP18 guuccguCGUGACAUUUCUUCGa ||| || ::|||||| agauuuuGCAAUGAGGAGAAGCa 2 17 79 101 [hg19:22:18659663-18659685:+] 0.6342 144 6 -12.94 -0.1103 MIMAT0004518 hsa-miR-16-2* 11274 USP18 auuucGUCGUGUCAUUAUAAcc ||||| |||||| uuauuCAGCA----AAUAUUua 3 18 496 513 [hg19:22:18660080-18660097:+] 0.7154 124 0 -7.11 -0.2884 MIMAT0000260 hsa-miR-182* 11274 USP18 aucAACCGUUCAGAUCUUGGu || || |: |||||| aauUUUUCACUUUGAGAACCa 2 19 431 451 [hg19:22:18660015-18660035:+] 0.5669 122 6 -10.63 -0.2823 MIMAT0004560 hsa-miR-183* 11274 USP18 aauaccgGGAAGCCAUUAAGug || | |||||| uugagaaCCAACAUUAAUUCca 3 16 442 463 [hg19:22:18660026-18660047:+] 0.5669 123 0 -7.59 -0.1964 MIMAT0004565 hsa-miR-218-1* 11274 USP18 gguaccacgaacugcCUUGGUa |||||| aauuuuucacuuugaGAACCAa 2 8 431 452 [hg19:22:18660015-18660036:+] 0.5669 120 6 -10.41 -0.1409 MIMAT0004566 hsa-miR-218-2* 11274 USP18 gcgccacGAACUGUCUUGGUac ||| : ||||||| uuuuucaCUUUG-AGAACCAac 3 16 433 453 [hg19:22:18660017-18660037:+] 0.5669 129 0 -10.65 -0.1306 MIMAT0004600 hsa-miR-144* 11274 USP18 gaauguCAUAU-ACU-AC-UAUAGg ||||| ||: || ||||| agacuuGUAUACUGGCUGAAUAUCa 2 17 395 419 [hg19:22:18659979-18660003:+] 0.5614 122 0 -11.88 -0.7080 MIMAT0004608 hsa-miR-146a* 11274 USP18 gacuucuugacuuaAAGUCUCc ||||||| aaaugcccaaaaccUUCAGAGa 2 9 4 25 [hg19:22:18659588-18659609:+] 0.6499 140 7 -7.93 -0.6415 MIMAT0000457 hsa-miR-188-5p 11274 USP18 gggaggugguacguUCCCUAc |||||| ccuuauuuauaauuAGGGAUa 2 8 126 146 [hg19:22:18659710-18659730:+] 0.6345 120 6 -12.92 -0.4953 MIMAT0004613 hsa-miR-188-3p 11274 USP18 acguuugggaCGUACACCCUc || ||||||| uuaguuaugaGCCUGUGGGAa 2 12 273 293 [hg19:22:18659857-18659877:+] 0.5544 147 7 -13.73 -0.3306 MIMAT0004615 hsa-miR-195* 11274 USP18 ccucgucguGUCGGUUAUAAcc |||| |||||| ucauuuauuCAGCAAAUAUUua 3 14 492 513 [hg19:22:18660076-18660097:+] 0.7154 137 0 -7.88 -0.3106 MIMAT0004682 hsa-miR-361-3p 11274 USP18 uuUAGUCUUAGUGUGGACCCCCu | ::|:| :||:||||||| gcAGUGGGA-GGCAUCUGGGGGc 2 22 324 345 [hg19:22:18659908-18659929:+] 0.5559 155 7 -27.17 -0.1702 MIMAT0000721 hsa-miR-369-3p 11274 USP18 uuUCUAGUUGGUACAUAAUAa :|:| :|| ||||||| ggGGGUAUUUCA-GUAUUAUa 2 20 361 380 [hg19:22:18659945-18659964:+] 0.5559 145 7 -11.77 -0.8817 MIMAT0000721 hsa-miR-369-3p 11274 USP18 uuucuaguugguacAUAAUAa |||||| uuuauaauuagggaUAUUAUc 2 8 131 151 [hg19:22:18659715-18659735:+] 0.6345 120 6 -5.27 -0.1048 MIMAT0000725 hsa-miR-373* 11274 USP18 ccuuucgcGGGGGUAAAACUCa ::::|| |||||| uuuguaauUUUUCACUUUGAGa 2 15 426 447 [hg19:22:18660010-18660031:+] 0.5669 122 6 -10.17 -0.1718 MIMAT0004688 hsa-miR-374a* 11274 USP18 uuaaUGUUAUGUUAGACUAUUc |:|| |:|:| |||||| cuccAUAAGAUAGUGUGAUAAa 2 19 527 548 [hg19:22:18660111-18660132:+] 0.6889 138 6 -10.59 -0.1512 MIMAT0004748 hsa-miR-423-5p 11274 USP18 uuucagagcgagagaCGGGGAGu ||||||| auauguaaccaugagGCCCCUCa 2 9 155 177 [hg19:22:18659739-18659761:+] 0.5937 140 7 -20.40 -0.7307 MIMAT0001340 hsa-miR-423-3p 11274 USP18 ugacuccccggagucUGGCUCGa ||:|||| uuuucaaacuauauaACUGAGCc 2 9 105 127 [hg19:22:18659689-18659711:+] 0.6344 124 0 -17.86 -0.1356 MIMAT0004751 hsa-miR-18b* 11274 USP18 cggucuuccccGUAAAUCCCgu :| |||||| agccuuauuuaUAAUUAGGGau 3 12 124 145 [hg19:22:18659708-18659729:+] 0.6345 123 0 -12.08 -0.2506 MIMAT0001638 hsa-miR-409-5p 11274 USP18 uacguuucaacgagccCAUUGGa |||||| gauauuaucaaaauauGUAACCa 2 8 143 165 [hg19:22:18659727-18659749:+] 0.5937 120 6 -7.84 -0.1428 MIMAT0001639 hsa-miR-409-3p 11274 USP18 uccccAAGUG--GCUC---GUUGUAAg ||||| :||| ||||||| aauuuUUCACUUUGAGAACCAACAUUa 2 18 431 457 [hg19:22:18660015-18660041:+] 0.5669 151 7 -14.62 -1.0704 MIMAT0002174 hsa-miR-484 11274 USP18 uagcccuccccugACUCGGACu |||||||| agcccuuuaguuaUGAGCCUGu 2 10 267 288 [hg19:22:18659851-18659872:+] 0.5544 145 7 -14.99 -0.6711 MIMAT0002174 hsa-miR-484 11274 USP18 uagcccuccccUGACUCGGAcu ||||||||| caaacuauauaACUGAGCCUua 3 12 109 130 [hg19:22:18659693-18659714:+] 0.6344 135 0 -15.10 -0.4775 MIMAT0002812 hsa-miR-492 11274 USP18 uucuUAGAACAGGGCGUCCAGGa || | ||| ||||||| aaccAUGAGGCCCCUCAGGUCCu 2 20 161 183 [hg19:22:18659745-18659767:+] 0.5529 155 7 -23.07 -0.2314 MIMAT0002836 hsa-miR-526b* 11274 USP18 cggagauuuuccuucGUGAAAg |||||| cuguuuguaauuuuuCACUUUg 2 8 423 444 [hg19:22:18660007-18660028:+] 0.5669 120 6 -7.40 -0.1070 MIMAT0002849 hsa-miR-524-5p 11274 USP18 cucuuUCACGAAGGGAAACAUc |||||| |||||| auaucAGUGCU---GUUUGUAa 2 18 414 432 [hg19:22:18659998-18660016:+] 0.5669 121 6 -11.61 -0.1142 MIMAT0002855 hsa-miR-520d-5p 11274 USP18 cuuucccgaagggAAACAUc |||||| aauaucagugcugUUUGUAa 2 8 413 432 [hg19:22:18659997-18660016:+] 0.5669 120 6 -7.03 -0.1258 MIMAT0002858 hsa-miR-520g 11274 USP18 ugugagauuucccuucGUGAAACa ||||||| gcuguuuguaauuuuuCACUUUGa 2 9 422 445 [hg19:22:18660006-18660029:+] 0.5669 140 7 -8.98 -1.2584 MIMAT0002859 hsa-miR-516b 11274 USP18 uuucacGAAGAAUGGAGGUCUa | ||| :||||| | auugauCAUCUCUUCUCCAUAa 2 17 513 534 [hg19:22:18660097-18660118:+] 0.7154 120 0 -10.48 -0.1503 MIMAT0002867 hsa-miR-520h 11274 USP18 ugagauuucccuucGUGAAACa ||||||| uguuuguaauuuuuCACUUUGa 2 9 424 445 [hg19:22:18660008-18660029:+] 0.5669 140 7 -8.94 -1.2584 MIMAT0003232 hsa-miR-568 11274 USP18 caCACAU-AUGU-A-AAUAUGUa | ||| | || | ||||||| ggGGGUAUUUCAGUAUUAUACAa 2 19 361 383 [hg19:22:18659945-18659967:+] 0.5559 147 7 -9.08 -0.9753 MIMAT0003235 hsa-miR-570 11274 USP18 cgUUUCCAUUAACGACAAAAGc :|:| || :||||||| auGAGGAGAAGCAUUGUUUUCa 2 21 89 110 [hg19:22:18659673-18659694:+] 0.6342 148 7 -11.39 -1.2189 MIMAT0003240 hsa-miR-575 11274 USP18 cgaGGACAGGUUGACCGAg |:||| : ||||||| agaCUUGUAU-ACUGGCUg 2 17 395 412 [hg19:22:18659979-18659996:+] 0.5614 150 7 -18.39 -0.7832 MIMAT0003271 hsa-miR-603 11274 USP18 cguuuucauuaacGUCACACac :|||||| cuucuccauaagaUAGUGUGau 3 10 524 545 [hg19:22:18660108-18660129:+] 0.6889 121 0 -9.69 -0.1118 MIMAT0003284 hsa-miR-616* 11274 USP18 uucagugacuucccaAAACUCa |||||| uuuguaauuuuucacUUUGAGa 2 8 426 447 [hg19:22:18660010-18660031:+] 0.5669 120 6 -7.64 -0.1686 MIMAT0003289 hsa-miR-620 11274 USP18 uaaAGAUA-UAGA-UAGAGGUa |: || |||| |||||| uuaUUGAUCAUCUCUUCUCCAu 2 18 511 532 [hg19:22:18660095-18660116:+] 0.7154 123 6 -12.75 -0.1649 MIMAT0004809 hsa-miR-628-5p 11274 USP18 ggaGAUCAUUUAUACAGUCGUa ||| | | | |||||| cugCUAUUCAUUUAUUCAGCAa 2 20 485 506 [hg19:22:18660069-18660090:+] 0.6412 123 6 -8.99 -0.6270 MIMAT0003337 hsa-miR-659 11274 USP18 accccuGGGAGGGACUUGGUUc | ||:: ||||||| auuuuuCACUUUGAGAACCAAc 2 17 432 453 [hg19:22:18660016-18660037:+] 0.5669 148 7 -12.77 -1.0455 MIMAT0003882 hsa-miR-767-5p 11274 USP18 guACGAGUCUGUUGGUACC-ACGu || |||| ||: |||| ||| ccUGAUCAGUCAG-AAUGGAUGCu 2 22 181 203 [hg19:22:18659765-18659787:+] 0.5529 127 0 -16.65 -0.4261 MIMAT0003945 hsa-miR-765 11274 USP18 guAGUGGAAGGAAGAGGAGGu | |:| || |||:|||| auUGAUCAUC--UCUUCUCCa 2 20 513 531 [hg19:22:18660097-18660115:+] 0.7154 136 0 -19.92 -0.1618 MIMAT0004907 hsa-miR-892a 11274 USP18 gaugCGUCUUUCCUGUGUCAc |:: :| ||||||| gauaGUGUGAUAAACACAGUc 2 18 535 555 [hg19:22:18660119-18660139:+] 0.6889 141 7 -11.24 -1.0822 MIMAT0004921 hsa-miR-889 11274 USP18 uguuaccaacaggCUAUAAUu ||||||| auuuauaauuaggGAUAUUAu 2 9 130 150 [hg19:22:18659714-18659734:+] 0.6345 140 7 -5.00 -0.9049 MIMAT0004923 hsa-miR-875-3p 11274 USP18 guGUUGGAGUCACAAAGGUcc :|| |:| | |||||| aaUAAAGUUA-U-UUUCCAc- 3 20 559 576 [hg19:22:18660143-18660160:+] 0.6625 123 0 -5.85 -0.4374 MIMAT0004956 hsa-miR-374b* 11274 USP18 uuacuauuAUGUUGGACGAUuc |::|| |||||| aaguguuuUGUAA-CUGCUAuu 3 15 472 492 [hg19:22:18660056-18660076:+] 0.6412 128 0 -12.24 -0.1599 MIMAT0004978 hsa-miR-935 11274 USP18 cgccaucgccuucgcCAUUGACc ||||||| ugaaucaaguguuuuGUAACUGc 2 9 466 488 [hg19:22:18660050-18660072:+] 0.5669 140 7 -11.27 -1.1150 MIMAT0004978 hsa-miR-935 11274 USP18 cgccaucgccuucgccAUUGACc |||||| uuguuuucaaacuauaUAACUGa 2 8 102 124 [hg19:22:18659686-18659708:+] 0.6344 120 6 -5.30 -0.1845 MIMAT0004985 hsa-miR-942 11274 USP18 guguaccgGUUUUGUCUCUUCu ||| : :|||||| agauuuugCAAUGAGGAGAAGc 2 15 79 100 [hg19:22:18659663-18659684:+] 0.6342 134 6 -11.74 -0.1308 MIMAT0004986 hsa-miR-943 11274 USP18 gaccuccugccguUGUCAGUc ||||||| uagugugauaaacACAGUCAu 2 9 537 557 [hg19:22:18660121-18660141:+] 0.6625 140 7 -9.52 -0.8028 MIMAT0004987 hsa-miR-944 11274 USP18 gaguaggcuacauguUAUUAAa |||||| aacugagccuuauuuAUAAUUa 2 8 119 140 [hg19:22:18659703-18659724:+] 0.6345 120 6 -6.05 -0.1913 MIMAT0005870 hsa-miR-1206 11274 USP18 cgaAUUUGUAGAUGUACUUGu |||||| ||||||: ugaUAAACACAGUCAUGAAUa 2 19 542 562 [hg19:22:18660126-18660146:+] 0.6625 142 0 -14.03 -0.3846 MIMAT0005878 hsa-miR-1287 11274 USP18 cuGA-GCUUGGUGACUAGGUCGu || | | :||:| ||:|||| aaCUGCUAUUCAUUUAUUCAGCa 2 21 483 505 [hg19:22:18660067-18660089:+] 0.6412 143 0 -17.37 -0.2017 MIMAT0005904 hsa-miR-1253 11274 USP18 acguccGACUAG-A-AGAAGAGa :||||| | ||||||| uauuuaUUGAUCAUCUCUUCUCc 2 16 508 530 [hg19:22:18660092-18660114:+] 0.7154 153 7 -15.97 -1.1083 MIMAT0005913 hsa-miR-1261 11274 USP18 uucgGUUUCGG-AAUAGGUa :||||:: || |||| ugaaUAAAGUUAUUUUCCAc 2 16 557 576 [hg19:22:18660141-18660160:+] 0.6625 122 0 -9.03 -0.1837 MIMAT0005924 hsa-miR-1270 11274 USP18 ugugucgagaagguauAGAGGUc |||||| uuuauugaucaucucuUCUCCAu 2 8 510 532 [hg19:22:18660094-18660116:+] 0.7154 120 6 -11.78 -0.1602 MIMAT0005944 hsa-miR-1252 11274 USP18 auuuacuuAAGUUAAAGG-AAGa ||| |||||| ||| cugucauuUUCCAUUUCCGUUCc 2 15 34 56 [hg19:22:18659618-18659640:+] 0.6530 126 0 -8.93 -0.7826 MIMAT0005949 hsa-miR-664 11274 USP18 acauccgaccccuauuUACUUAu |||||| ugugauaaacacagucAUGAAUa 2 8 540 562 [hg19:22:18660124-18660146:+] 0.6625 120 6 -8.36 -0.4617 MIMAT0006766 hsa-miR-1826 11274 USP18 uaacgcAAG-C-UUCACAGCU-ACUAGUua ||| | || | |: | |||||| cauuuaUUCAGCAAAUAUUUAUUGAUCAuc 3 22 493 522 [hg19:22:18660077-18660106:+] 0.7154 130 0 -8.27 -0.2554 MIMAT0009977 hsa-miR-2052 11274 USP18 uguaaugACAAUAGUUUUGu | |||||||||: uuagggaUAUUAUCAAAAUa 2 14 138 157 [hg19:22:18659722-18659741:+] 0.6345 141 0 -9.88 -0.1159 MIMAT0009977 hsa-miR-2052 11274 USP18 uguaaugacaauaGUUUUGu |||||| ---uggaaaugccCAAAACc 2 8 1 17 [hg19:22:18659585-18659601:+] 0.6499 120 6 -4.29 -0.2066 MIMAT0011161 hsa-miR-2116* 11274 USP18 ccCUCAAGAACCGUAC-CCUCc ||| |:||| ||| |||| aaGAGAUUUUGCAAUGAGGAGa 2 20 76 97 [hg19:22:18659660-18659681:+] 0.6451 131 0 -16.11 -1.0844 MIMAT0011162 hsa-miR-2117 11274 USP18 gacaggaaccguuuCUCUUGu |||||| uaauuuuucacuuuGAGAACc 2 8 430 450 [hg19:22:18660014-18660034:+] 0.5669 120 6 -7.98 -0.1246 MIMAT0011777 hsa-miR-2277 11274 USP18 cucgguccgucccGCGACAGu ||||||| ucagagauugacaCGCUGUCa 2 9 19 39 [hg19:22:18659603-18659623:+] 0.6499 140 7 -18.17 -1.1733 MIMAT0014980 hsa-miR-3118 11274 USP18 ucuUAAAAGUA-UUACGUCAGUGu | | | || || ||||||: gauAGUGUGAUAAACACAGUCAUg 2 21 535 558 [hg19:22:18660119-18660142:+] 0.6889 135 0 -11.03 -0.1514 MIMAT0015003 hsa-miR-3136 11274 USP18 uuaCUGGGA-U---GGAUAAGUCAGUc | |||| | |||: ||||||| gagGCCCCUCAGGUCCUGAUCAGUCAg 2 21 167 193 [hg19:22:18659751-18659777:+] 0.5529 154 7 -27.88 -0.2678 MIMAT0015004 hsa-miR-544b 11274 USP18 aaucuuUACGUGUUGGAGUCCa ||| : ||||||| guaaccAUGAGGCCCCUCAGGu 2 17 159 180 [hg19:22:18659743-18659764:+] 0.5529 144 7 -16.86 -0.1177 MIMAT0015006 hsa-miR-3138 11274 USP18 ugagggagauggAGUGACAGGUGu |:|:| ||||| ucaugaauaaagUUAUUUUCCAC- 2 13 554 576 [hg19:22:18660138-18660160:+] 0.6625 120 0 -8.83 -0.1381 MIMAT0015009 hsa-miR-548t 11274 USP18 guuuuuggugcuAGUGAAAac ||||||| guuuguaauuuuUCACUUUga 3 10 425 445 [hg19:22:18660009-18660029:+] 0.5669 125 0 -7.69 -0.1533 MIMAT0015021 hsa-miR-3148 11274 USP18 uucGUGUGUG-GUCAA-AAAAGGu ||:: |: |||| |||||| aguCAUGAAUAAAGUUAUUUUCCa 2 20 552 575 [hg19:22:18660136-18660159:+] 0.6625 122 6 -12.35 -1.3109 MIMAT0015021 hsa-miR-3148 11274 USP18 uuCGUGUGUGGUCA--AAAAAGgu |::| :::: || |||||| caGUGC-UGUUUGUAAUUUUUCac 3 21 418 440 [hg19:22:18660002-18660024:+] 0.5669 121 0 -7.34 -0.1137 MIMAT0015027 hsa-miR-3074 11274 USP18 gccACGGAUGACUCGAC-UAUAg ||: ||||| |||| |||| acuUGUAUACUG-GCUGAAUAUc 2 20 397 418 [hg19:22:18659981-18660002:+] 0.5614 133 0 -18.85 -0.3904 MIMAT0015029 hsa-miR-3155 11274 USP18 ucaaGGGUGA-C-GU-CUCGGACc ||| :| | :| ||||||| uuagCCCUUUAGUUAUGAGCCUGu 2 18 265 288 [hg19:22:18659849-18659872:+] 0.5544 142 7 -18.74 -0.6748 MIMAT0015029 hsa-miR-3155 11274 USP18 ucaaggGUGACGUCUCGGAcc :|: | |||||| aaacuaUAUAACUGAGCCUua 3 16 110 130 [hg19:22:18659694-18659714:+] 0.6344 123 0 -11.11 -0.4674 MIMAT0015031 hsa-miR-3157 11274 USP18 ucuGACGUGAUCGGACCGACUu :||:| || |||||||| gacUUGUA-UA--CUGGCUGAa 2 20 396 414 [hg19:22:18659980-18659998:+] 0.5614 150 7 -22.27 -0.8954 MIMAT0015035 hsa-miR-3161 11274 USP18 uagacccggagacaagAAUAGUc |||||| uuuauaauuagggauaUUAUCAa 2 8 131 153 [hg19:22:18659715-18659737:+] 0.6345 120 6 -7.65 -0.2495 MIMAT0015064 hsa-miR-3184 11274 USP18 uuuucgagccagACUCCGGGGAGu ||||||||||| aauauguaaccaUGAGGCCCCUCa 2 13 154 177 [hg19:22:18659738-18659761:+] 0.5937 160 7 -27.06 -0.7344 MIMAT0015073 hsa-miR-3190-5p 11274 USP18 agagaccggcaGAUGGAAGGUGu :||::|||||| caugaauaaagUUAUUUUCCAC- 2 13 555 576 [hg19:22:18660139-18660160:+] 0.6625 136 6 -12.84 -0.5318 MIMAT0016851 hsa-miR-4299 11274 USP18 cggagaguACAGUGGUCg | ||||||| auggaugcUUUCACCAGc 2 11 195 212 [hg19:22:18659779-18659796:+] 0.5529 142 7 -15.05 -0.2488 MIMAT0016863 hsa-miR-4311 11274 USP18 guGUGAGUCG-AGAGAAag :|:| | | |||||| uuUAUUGAUCAUCUCUUcu 3 17 510 528 [hg19:22:18660094-18660112:+] 0.7154 127 0 -7.55 -0.1418 MIMAT0016869 hsa-miR-4318 11274 USP18 ucguacauggGUGUCAc |||||| gugugauaaaCACAGUc 2 8 539 555 [hg19:22:18660123-18660139:+] 0.6625 120 6 -11.27 -0.1268 MIMAT0016872 hsa-miR-4317 11274 USP18 uuugagggacCGUUACa |||||| aagagauuuuGCAAUGa 2 8 76 92 [hg19:22:18659660-18659676:+] 0.6451 120 6 -8.39 -0.1351 MIMAT0016882 hsa-miR-4253 11274 USP18 ugggggACCUGUACGGGa |||| |||||| ------UGGAAAUGCCCa 2 13 1 12 [hg19:22:18659585-18659596:+] 0.6499 128 6 -14.81 -0.1210 MIMAT0016886 hsa-miR-4252 11274 USP18 accacgacugAGUCACCGg |||||||| gggccaaaggUCAGUGGCa 2 10 342 360 [hg19:22:18659926-18659944:+] 0.5559 145 7 -17.91 -0.3985 MIMAT0016886 hsa-miR-4252 11274 USP18 acCACGACU-GAGUCACCGg ||| || ||||||| caGUGGGGAGAGCAGUGGCa 2 18 307 326 [hg19:22:18659891-18659910:+] 0.5559 144 7 -20.28 -0.1977 MIMAT0016896 hsa-miR-4268 11274 USP18 gugUAGGACUCUCCUCCUCgg ||::|| | |||||| gagAUUUUGCAAUGAGGAGaa 3 19 78 98 [hg19:22:18659662-18659682:+] 0.6342 138 0 -15.08 -0.1279 MIMAT0016899 hsa-miR-4264 11274 USP18 uuacugguacUGACUCa |||||| aaacuauauaACUGAGc 2 8 110 126 [hg19:22:18659694-18659710:+] 0.6344 120 6 -11.17 -0.3033 MIMAT0016903 hsa-miR-4273 11274 USP18 gacAGGU-AGUCUCUUGug |:|| |: |||||| uuuUUCACUUUGAGAACca 3 16 433 451 [hg19:22:18660017-18660035:+] 0.5669 130 0 -10.22 -0.2127 MIMAT0016906 hsa-miR-4274 11274 USP18 gucccccucccUGACGAc |||||| aguguuuuguaACUGCUa 2 8 473 490 [hg19:22:18660057-18660074:+] 0.6412 120 6 -6.79 -0.2555 MIMAT0016909 hsa-miR-4279 11274 USP18 cuuCGGCCCUCCUCUc || ||||||| uuuGCAAUGAGGAGAa 2 14 83 98 [hg19:22:18659667-18659682:+] 0.6342 141 7 -12.39 -1.2559 MIMAT0016915 hsa-miR-4284 11274 USP18 uaccccacuacACUCGGg |||||| aacuauauaacUGAGCCu 2 8 111 128 [hg19:22:18659695-18659712:+] 0.6344 120 6 -9.58 -0.4054 MIMAT0000070 hsa-miR-17 11274 USP18 gauggacgugacauucGUGAAAc |||||| gcuguuuguaauuuuuCACUUUg 2 8 422 444 [hg19:22:18660006-18660028:+] 0.5669 120 6 -19.32 -0.1070 MIMAT0000075 hsa-miR-20a 11274 USP18 gauggacgugauauucGUGAAAu |||||| gcuguuuguaauuuuuCACUUUg 2 8 422 444 [hg19:22:18660006-18660028:+] 0.5669 120 6 -17.21 -0.1070 MIMAT0000080 hsa-miR-24 11274 USP18 gacaagGACGACUUGACUCGGu || : ||||||||| uucaaaCUAUAUAACUGAGCCu 2 17 107 128 [hg19:22:18659691-18659712:+] 0.6344 152 7 -15.79 -1.3003 MIMAT0000086 hsa-miR-29a 11274 USP18 auuGGCUA--AAGUC-UACC-ACGAu |:||| |||| |||| |||| gucCUGAUCAGUCAGAAUGGAUGCUu 2 20 179 204 [hg19:22:18659763-18659788:+] 0.5529 125 0 -20.56 -0.3500 MIMAT0000093 hsa-miR-93 11274 USP18 gauggacgugcuugucGUGAAAc |||||| gcuguuuguaauuuuuCACUUUg 2 8 422 444 [hg19:22:18660006-18660028:+] 0.5669 120 6 -19.32 -0.1091 MIMAT0000097 hsa-miR-99a 11274 USP18 guguucuaGCCUAGAUGCC-CAa :|||||||||| || uccguuccUGGAUCUACGGAGUc 2 15 49 71 [hg19:22:18659633-18659655:+] 0.6530 130 0 -23.19 -0.7693 MIMAT0000098 hsa-miR-100 11274 USP18 guguuCAAG--CCUAGAUGCC-CAa |||| |||||||||| || uuuccGUUCCUGGAUCUACGGAGUc 2 18 47 71 [hg19:22:18659631-18659655:+] 0.6530 136 0 -23.19 -0.7693 MIMAT0000100 hsa-miR-29b 11274 USP18 uuguGACUA--AAGU-UUACC-ACGAu ||||| ||| ||||| |||| ggucCUGAUCAGUCAGAAUGGAUGCUu 2 20 178 204 [hg19:22:18659762-18659788:+] 0.5529 129 0 -18.79 -0.3500 MIMAT0000103 hsa-miR-106a 11274 USP18 gauggacgugacauucGUGAAAa |||||| gcuguuuguaauuuuuCACUUUg 2 8 422 444 [hg19:22:18660006-18660028:+] 0.5669 120 6 -15.08 -0.1070 MIMAT0000280 hsa-miR-223 11274 USP18 accccauaaacUGU-UUGACUgu |:| |||||| guuuucaaacuAUAUAACUGAgc 3 12 104 126 [hg19:22:18659688-18659710:+] 0.6344 122 0 -6.30 -0.2572 MIMAT0000318 hsa-miR-200b 11274 USP18 aguaguaaugguccGUCAUAAu ||||||| ggcaggggguauuuCAGUAUUa 2 9 357 378 [hg19:22:18659941-18659962:+] 0.5559 140 7 -13.37 -1.0191 MIMAT0000430 hsa-miR-138 11274 USP18 gccggaCUAAGUGUUGUGGUCGa ||| | : ||||||| agaaugGAUGC-UUUCACCAGCa 2 18 192 213 [hg19:22:18659776-18659797:+] 0.5529 143 7 -16.38 -0.6468 MIMAT0000435 hsa-miR-143 11274 USP18 cucgAUGUCACGAAGUAGAGu | :| || ||||||| aauaUUUAUUG-AUCAUCUCu 2 18 506 525 [hg19:22:18660090-18660109:+] 0.7154 143 7 -9.76 -1.2790 MIMAT0000440 hsa-miR-191 11274 USP18 guCGACG--AAAACCCUAAGGCAAc ||||: |||| ||||||| acGCUGUCAUUUUCCAUUUCCGUUc 2 22 31 55 [hg19:22:18659615-18659639:+] 0.6530 156 7 -15.61 -0.6781 MIMAT0000447 hsa-miR-134 11274 USP18 ggggAGACCAGUUG-GUCAGUGu | || | ||| ||||||: auagUGUGAUAAACACAGUCAUg 2 19 536 558 [hg19:22:18660120-18660142:+] 0.6625 141 0 -13.54 -0.1320 MIMAT0000617 hsa-miR-200c 11274 USP18 agguaguaaugggccGUCAUAAu ||||||| uggcaggggguauuuCAGUAUUa 2 9 356 378 [hg19:22:18659940-18659962:+] 0.5559 140 7 -10.80 -1.0191 MIMAT0000646 hsa-miR-155 11274 USP18 ugggGAUAGUGCUAAUCGUAAUu | || | || ||||||: uuugCAAUGAGGAGAAGCAUUGu 2 20 83 105 [hg19:22:18659667-18659689:+] 0.6342 139 0 -11.41 -0.1088 MIMAT0000680 hsa-miR-106b 11274 USP18 uaGACGUGACAGUCGUGAAAu :||:| | |: |||||| guUUGUAAU-UUUUCACUUUg 2 20 425 444 [hg19:22:18660009-18660028:+] 0.5669 121 6 -11.45 -0.1070 MIMAT0000681 hsa-miR-29c 11274 USP18 auuGGCUA--AAGU-UUACC-ACGAu |:||| ||| ||||| |||| gucCUGAUCAGUCAGAAUGGAUGCUu 2 20 179 204 [hg19:22:18659763-18659788:+] 0.5529 125 0 -17.86 -0.3500 MIMAT0000689 hsa-miR-99b 11274 USP18 gcguuccaGCCAAGAUGCC-CAc :|| ||||||| || uccguuccUGGAUCUACGGAGUc 2 15 49 71 [hg19:22:18659633-18659655:+] 0.6530 122 0 -19.19 -0.7693 MIMAT0004687 hsa-miR-371-5p 11274 USP18 ucacgGGGGUGUCAA-ACUCa |||: :|||| |||| auuagCCCUUUAGUUAUGAGc 2 16 264 284 [hg19:22:18659848-18659868:+] 0.5544 123 0 -18.46 -0.3166 MIMAT0004687 hsa-miR-371-5p 11274 USP18 ucacgggggugucAAACUCa |||||| uguaauuuuucacUUUGAGa 2 8 428 447 [hg19:22:18660012-18660031:+] 0.5669 120 6 -10.88 -0.1718 MIMAT0000727 hsa-miR-374a 11274 USP18 gugaauaguccaaCAUAAUAUu |||||||| aggggguauuucaGUAUUAUAc 2 10 360 381 [hg19:22:18659944-18659965:+] 0.5559 145 7 -8.22 -0.2699 MIMAT0000727 hsa-miR-374a 11274 USP18 gugAAUAGUCCAACAUAAUAuu | ||:||| |||||| uuaUAAUUAGG-GAUAUUAUca 3 20 132 152 [hg19:22:18659716-18659736:+] 0.6345 133 0 -9.39 -0.2106 MIMAT0000730 hsa-miR-377 11274 USP18 uguuuucaacggaaaCACACUa |||||| cuucuccauaagauaGUGUGAu 2 8 524 545 [hg19:22:18660108-18660129:+] 0.6889 120 6 -9.45 -0.1404 MIMAT0000736 hsa-miR-381 11274 USP18 ugucucucgaacggGAACAUAu ||||||| cugcugugaccagaCUUGUAUa 2 9 384 405 [hg19:22:18659968-18659989:+] 0.5614 140 7 -12.42 -0.8527 MIMAT0004692 hsa-miR-340 11274 USP18 uuagucagaguaacgAAAUAUu |||||| uauaacugagccuuaUUUAUAa 2 8 116 137 [hg19:22:18659700-18659721:+] 0.6345 120 6 -5.77 -0.2561 MIMAT0000753 hsa-miR-342-3p 11274 USP18 ugcccacgcuaaagaCACACUcu |||||| cuucuccauaagauaGUGUGAua 3 9 524 546 [hg19:22:18660108-18660130:+] 0.6889 120 0 -8.28 -0.2188 MIMAT0003393 hsa-miR-425 11274 USP18 aguugCCCUCACU-AGC-ACAGUAa | || ||| || |||||| cuucaGAGAUUGACACGCUGUCAUu 2 19 17 41 [hg19:22:18659601-18659625:+] 0.6499 121 6 -15.36 -0.6889 MIMAT0001413 hsa-miR-20b 11274 USP18 gauggacgugauacucGUGAAAc |||||| gcuguuuguaauuuuuCACUUUg 2 8 422 444 [hg19:22:18660006-18660028:+] 0.5669 120 6 -19.32 -0.1070 MIMAT0001536 hsa-miR-429 11274 USP18 ugccaaaauggucuGUCAUAAu ||||||| ggcaggggguauuuCAGUAUUa 2 9 357 378 [hg19:22:18659941-18659962:+] 0.5559 140 7 -14.14 -1.0191 MIMAT0001625 hsa-miR-431 11274 USP18 acguACUGCCGG-ACGUUCUGu | :| ||: |||||||| gugcUCGCUGCUGUGCAAGACa 2 18 243 264 [hg19:22:18659827-18659848:+] 0.5529 152 7 -19.88 -0.5202 MIMAT0001627 hsa-miR-433 11274 USP18 ugugGCUCCUCG-GGUAGUACUa :|| | | | :|||||| agugUGAUAAACACAGUCAUGAa 2 19 538 560 [hg19:22:18660122-18660144:+] 0.6625 129 6 -10.30 -0.2597 MIMAT0002817 hsa-miR-495 11274 USP18 uuCUUCACGUGGU-ACAAACAaa ||| || :: ||||||| cuGAAUAUCAGUGCUGUUUGUaa 3 21 410 432 [hg19:22:18659994-18660016:+] 0.5669 131 0 -11.43 -0.1142 MIMAT0002853 hsa-miR-519d 11274 USP18 gugagauuucccuccGUGAAAc |||||| cuguuuguaauuuuuCACUUUg 2 8 423 444 [hg19:22:18660007-18660028:+] 0.5669 120 6 -11.27 -0.1070 MIMAT0002874 hsa-miR-503 11274 USP18 gacGUCUUGA--CAAGGGCGACGAu |:| || || |:||||||| gcuCGGUCCUGGGUGCUCGCUGCUg 2 21 231 255 [hg19:22:18659815-18659839:+] 0.5529 155 7 -28.68 -0.1332 MIMAT0002878 hsa-miR-506 11274 USP18 agaUGA-GUCUUCCCACGGAAu ||| :| || | ||||| caaACUAUAUAACUGAGCCUUa 2 19 109 130 [hg19:22:18659693-18659714:+] 0.6344 121 0 -9.17 -0.1413 MIMAT0003328 hsa-miR-653 11274 USP18 gucAUCUCUAACAAAGUUGUg || ||| ||||:|| ugcUAUUCAUUUAUUCAGCAa 2 19 486 506 [hg19:22:18660070-18660090:+] 0.6412 134 0 -6.91 -0.1353 MIMAT0004903 hsa-miR-300 11274 USP18 ucucucucagacggGAACAUAu ||||||| cugcugugaccagaCUUGUAUa 2 9 384 405 [hg19:22:18659968-18659989:+] 0.5614 140 7 -12.50 -0.8527 MIMAT0004953 hsa-miR-873 11274 USP18 uccucUGAGUGUUCAAGGACg |:|: | ||||||| uuuccAUUUCC--GUUCCUGg 2 17 41 59 [hg19:22:18659625-18659643:+] 0.6530 141 7 -11.75 -0.6127 MIMAT0004955 hsa-miR-374b 11274 USP18 gugaaucguccaaCAUAAUAUa |||||||| aggggguauuucaGUAUUAUAc 2 10 360 381 [hg19:22:18659944-18659965:+] 0.5559 145 7 -10.03 -0.2699 MIMAT0004955 hsa-miR-374b 11274 USP18 gugAAUCGUCCAACAUAAUAua | | :||| |||||| uuaUAAUUAGG-GAUAUUAUca 3 20 132 152 [hg19:22:18659716-18659736:+] 0.6345 125 0 -6.55 -0.2145 MIMAT0004959 hsa-miR-216b 11274 USP18 aguguaaacGGACGUCUCUAAa ||| |||||||| ugcccaaaaCCUUCAGAGAUUg 2 14 7 28 [hg19:22:18659591-18659612:+] 0.6499 157 7 -16.04 -0.1939 MIMAT0004959 hsa-miR-216b 11274 USP18 aguguaaaCGGACG--UCUCUAAa |:|| | ||||||| ucuacggaGUCUUCUAAGAGAUUu 2 15 61 84 [hg19:22:18659645-18659668:+] 0.6451 145 7 -16.24 -0.9087

DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G018374 USP18 Homo sapiens 11274 23291318

DNA & RNA Element - TargetScan Gene Name UTR Region Start UTR Region End AIR Total Normalized 3P-seq-tags & Pseudocounts Strand hg19_chromosome Genome Start Genome End USP18; ISG43 1 580 100 5.01 + chr22 18659584 18660164

DNA & RNA Element - RepTar Gene Name miRNA Begin End Profile USP18 hsa-miR-892a beg:536 end:555 pic:3' GATGCGT-CTTTCCTGTGTCAC 5'& |.. || ||||||| &5' ----GTGTGATAA-ACACAGT- 3' USP18 hsa-miR-575 beg:395 end:412 pic:3' CGAGGACAGGTTGACCGAG 5'& |.||| ||||||| &5' ---CTTGTAT-ACTGGCT- 3' USP18 hsa-miR-216b beg:13 end:28 pic:3' AGTGTAAACGGACGTCTCTAAA 5'& ||| |||||||| &5' ---------CCTTCAGAGATT- 3' USP18 hsa-miR-216b beg:66 end:85 pic:3' AGTGTAAACGGACG--TCTCTAAA 5'& |.|| |||||||| &5' --------GTCTTCTAAGAGATTT 3' USP18 hsa-miR-138 beg:195 end:213 pic:3' GCCGGACTAAGTGTTGTGGTCGA 5'& ||| ||||||| &5' ------GATGCTTT-CACCAGC- 3' USP18 hsa-miR-492 beg:169 end:184 pic:3' TTCTTAGAACAGGGCGTCCAGGA 5'& ||| |||||||| &5' -----------CCCTCAGGTCCT 3' USP18 hsa-miR-544b beg:167 end:181 pic:3' AATCTTTACGTGTTGGAGTCCA 5'& || | |||||||| &5' --------GC-C--CCTCAGGT 3' USP18 hsa-miR-24 beg:110 end:128 pic:3' GACAAGGACGACTTGACTCGGT 5'& || ||||||||| &5' ------CTATATAACTGAGCC- 3' USP18 kshv-miR-K12-11star beg:383 end:395 pic:3' GGATCTTTACAAATTCGACACTGG 5'& ||||||||| &5' ---------------GCTGTGACC 3' USP18 ebv-miR-BART21-3p beg:367 end:387 pic:3' TTTGTGGTCACCC-GTGTTGATC 5'& .|||| .||||||. &5' -----TCAGTATTATACAACTG- 3' USP18 ebv-miR-BART5 beg:422 end:445 pic:3' GCTACCCGT-CGATAT-AAGTGGAAC 5'& |. |. || |||||.||| &5' ------GTTTGTAATTTTTCACTTTG 3' USP18 sv40-miR-S1-5p beg:161 end:178 pic:3' TTCCGAGTAAAGTCCGGGGAGT 5'& ||| |||||||||| &5' ------CATG--AGGCCCCTCA 3' USP18 hsa-miR-3184 beg:163 end:178 pic:3' TTTTCGAGCCAGACTCCGGGGAGT 5'& |||||||||||| &5' ------------TGAGGCCCCTCA 3' USP18 hcmv-miR-UL112 beg:21 end:43 pic:3' TCGGAC-CTAGA---GTGGCAGTGAA 5'& | |||. |.|.||||.|| &5' -----GAGATTGACACGCTGTCATTT 3' USP18 hiv1-miR-N367 beg:336 end:357 pic:3' AACTTCGTGGTAGGTTTCCAGTCA 5'& ||..| |||||||||||| &5' -TGGGGG-----CCAAAGGTCAGT 3' USP18 hiv1-miR-TAR-3p beg:6 end:26 pic:3' ACCCAAGGGATCAATCGGTCTCT 5'& ||| .|||||| &5' ------CCCAAAACCTTCAGAGA 3' USP18 hsa-let-7a-2star beg:238 end:260 pic:3' CCTTTCGATCCTCCGACATGTC 5'& ||. ||| | |||||.|| &5' GGGT-GCTCGCT-GCTGTGCA- 3' USP18 hsa-let-7f-2star beg:388 end:406 pic:3' CCTTTCTGTCATCTG-ACATATC 5'& ||| |||| |||||| &5' -----GACC--AGACTTGTATA- 3' USP18 hsa-let-7f beg:108 end:131 pic:3' TTGATATGTTAGATGATGGAGT 5'& |||||||.|| ||. .|||.| &5' AACTATATAA-CTGA-GCCTTA 3' USP18 hsa-let-7gstar beg:309 end:332 pic:3' CGTTC-CGTCACCGGACATGTC 5'& | .|| |||||||| ||. . &5' GGGAGAGCAGTGGCA-GTGGG- 3' USP18 hsa-miR-101 beg:415 end:427 pic:3' AAGTCAATAGTGTCATGACAT 5'& ||||.|||| &5' -----------CAGTGCTGT- 3' USP18 hsa-miR-103-2star beg:83 end:101 pic:3' GTTCCGTCGTGACATTTCTTCGA 5'& ||| || .|||||| &5' -------GCAATGAGGAGAAGC- 3' USP18 hsa-miR-107 beg:415 end:428 pic:3' ACTATCGGGACATGTTACGACGA 5'& ||.|||||.| &5' -------------CAGTGCTGTT 3' USP18 hsa-miR-1179 beg:184 end:205 pic:3' GGTTGGTTACTTTCTTACGAA 5'& || || ||| |.|||||| &5' -CAGTCA--GAATGGATGCTT 3' USP18 hsa-miR-1204 beg:208 end:226 pic:3' TATTACCTCTGGTCCGGTGCT 5'& | ||||| |||||.| &5' -----GCAGACCCGGCCATG- 3' USP18 hsa-miR-1206 beg:542 end:563 pic:3' CGAATTTGTAGATGTACTTGT 5'& |||||| ||||||.| &5' ---TAAACACAGTCATGAATA 3' USP18 hsa-miR-1226star beg:188 end:209 pic:3' GGGGTAGGTCCGGACGTACGGGAGTG 5'& .||| || ||||..|||| &5' ------TCAGAA-TGGATGCTTTCAC 3' USP18 hsa-miR-1231 beg:242 end:266 pic:3' CGT-CGACAGGCGGG-TCTGTG 5'& || |||| |.|. | |||||. &5' GCTCGCTG-CTGTGCAAGACAT 3' USP18 hsa-miR-1237 beg:347 end:366 pic:3' GACCCCCTG-CCTCGTCTTCCT 5'& || | ||||..|| &5' -----GGTCAGTGGCAGGGGG- 3' USP18 hsa-miR-1250 beg:88 end:106 pic:3' TTTCCGGTGTAGGTCGTGGCA 5'& .||| ||||..|| &5' -GAGGAGA-----AGCATTGT 3' USP18 hsa-miR-1253 beg:511 end:530 pic:3' ACGTCCGACTAGA--AGAAGAGA 5'& .||||| ||||||| &5' ------TTGATCATCTCTTCTC- 3' USP18 hsa-miR-125a-5p beg:286 end:303 pic:3' AGTGTCCAATTTCCCA--GAGTCCCT 5'& ||| .||||||. &5' ------------GGGAACTTCAGGGG 3' USP18 hsa-miR-125a-5p beg:135 end:145 pic:3' AGTGTCCAATTTCCCAGAGTCCCT 5'& |.||||| &5' -----------------TTAGGGA 3' USP18 hsa-miR-125b beg:286 end:303 pic:3' AGTGTTCAATCCCA--GAGTCCCT 5'& ||| .||||||. &5' ----------GGGAACTTCAGGGG 3' USP18 hsa-miR-1260 beg:318 end:333 pic:3' ACCACCGTCTCCACCCTA 5'& |||||| |||||| &5' --GTGGCA---GTGGGA- 3' USP18 hsa-miR-1261 beg:484 end:503 pic:3' TTCGGTTTCGGAATAGGTA 5'& ||.| .||||.|| &5' --GCTATTCATTTATTCA- 3' USP18 hsa-miR-1261 beg:118 end:136 pic:3' TTCGGTTTCGGAATAGGTA 5'& | .||||||||..|| &5' ----CTGAGCCTTATTTAT 3' USP18 hsa-miR-1270 beg:515 end:532 pic:3' TGTGTCGAGAAGGTATAGAGGTC 5'& || ||. |||||| &5' -------TCATCTCT-TCTCCA- 3' USP18 hsa-miR-1278 beg:357 end:379 pic:3' TATCTACTATACGTGTCATGAT 5'& || |.||| |||||.|| &5' --AGGGGGTATTT-CAGTATTA 3' USP18 hsa-miR-1296 beg:163 end:186 pic:3' CCTCTACCTCGGTC---CCGGGATT 5'& ||| ||| ||.|||.| &5' ----ATGAGGCCCCTCAGGTCCTGA 3' USP18 hsa-miR-133a beg:330 end:350 pic:3' GTCGACCAACTTCCCCTGGTTT 5'& || ||||.||||| &5' -----GGCATCTGGGGGCCAAA 3' USP18 hsa-miR-133a beg:383 end:398 pic:3' GTCGACCAACTTCCCCTGGTTT 5'& |||| |||||.| &5' --GCTGT--------GACCAGA 3' USP18 hsa-miR-133b beg:330 end:350 pic:3' ATCGACCAACTTCCCCTGGTTT 5'& || ||||.||||| &5' -----GGCATCTGGGGGCCAAA 3' USP18 hsa-miR-133b beg:383 end:398 pic:3' ATCGACCAACTTCCCCTGGTTT 5'& |||| |||||.| &5' --GCTGT--------GACCAGA 3' USP18 hsa-miR-134 beg:168 end:195 pic:3' GGGGAGACCAG--TTGGTCAGTGT 5'& |||||| |||| .|.|||||| | &5' CCCCTCAGGTCCTGATCAGTCAGA 3' USP18 hsa-miR-155 beg:86 end:105 pic:3' TGGGGATAGTGCTAATCGTAATT 5'& || | || ||||||. &5' ------ATGAGGAGAAGCATTG- 3' USP18 hsa-miR-16 beg:406 end:428 pic:3' GCGG-TTATAAATGCACGACGAT 5'& ||. ||||| ||||||.| &5' -GCTGAATATCA--GTGCTGTT- 3' USP18 hsa-miR-181a-2star beg:336 end:359 pic:3' CCATGTCA-GTTGCCAGTCACCA 5'& |. .| ||| ||||||||| &5' --TGGGGGCCAAAGGTCAGTGG- 3' USP18 hsa-miR-185 beg:510 end:528 pic:3' AGTCCTTGACGGAAAGAGAGGT 5'& |.|| |||||.| &5' ------ATTGATCATCTCTTC- 3' USP18 hsa-miR-1915 beg:225 end:244 pic:3' GGGCGGCGCAG-CGGGACCCC 5'& ||.|| || |.|||||| &5' ---GCTGC-TCGGTCCTGGG- 3' USP18 hsa-miR-1915star beg:342 end:364 pic:3' CCGGG--CCCGTCGTTCCGTTCCA 5'& |||| || |||. ||||.|| &5' GGCCAAAGGTCAGT--GGCAGGG- 3' USP18 hsa-miR-195 beg:406 end:428 pic:3' CGGTTATAAAGACACGACGAT 5'& || | || || ||||||.| &5' GCTGA-ATATCAGTGCTGTT- 3' USP18 hsa-miR-1976 beg:345 end:366 pic:3' TGTCGTTCC--TC-CCGTCCTCC 5'& |||| || ||||||.|| &5' -----AAGGTCAGTGGCAGGGGG 3' USP18 hsa-miR-1979 beg:309 end:333 pic:3' ATCAGTTCACT-TCGTCACCCTC 5'& .| .|| .|||||||||| &5' -GGGAGAGCAGTGGCAGTGGGAG 3' USP18 hsa-miR-199b-5p beg:391 end:410 pic:3' CTTGTCTATCAGATT-TGTGACCC 5'& |||| || |.||||| &5' ---CAGA----CTTGTATACTGG- 3' USP18 hsa-miR-19astar beg:246 end:264 pic:3' ACATCACGTTGATACGTTTTGA 5'& || .||.|||||.|| &5' ------GCTGCTGTGCAAGAC- 3' USP18 hsa-miR-19b-1star beg:246 end:264 pic:3' CGACCTACGTTTGG-ACGTTTTGA 5'& || .|. |||||.|| &5' -------GCT-GCTGTGCAAGAC- 3' USP18 hsa-miR-19b-2star beg:0 end:25 pic:3' ACTTTACG---TTTGGACGTTTTGA 5'& ||||||| |||||| ||.|. &5' -GAAATGCCCAAAACCTTCAGAG-- 3' USP18 hsa-miR-203 beg:351 end:373 pic:3' GATCACCAGGA-TTTGTAAAGTG 5'& ||||| | . .|||||| &5' --AGTGG-CAGGGGGTATTTCA- 3' USP18 hsa-miR-2052 beg:248 end:265 pic:3' TGTAATGACAATAGTTTTGT 5'& |.|||| |||.||| &5' ----TGCTGTG--CAAGACA 3' USP18 hsa-miR-218-1star beg:438 end:452 pic:3' GGTACCACGAACTGCCTTGGTA 5'& .|||| |||||| &5' --------TTTGA--GAACCA- 3' USP18 hsa-miR-2277 beg:347 end:373 pic:3' CTCGGT--CCGTCCCGCGAC-AGT 5'& .|.|| ||||||| |. ||| &5' -GGTCAGTGGCAGGGGGTATTTCA 3' USP18 hsa-miR-23a beg:526 end:546 pic:3' CCTTTAGGGAC-C-GTTACACTA 5'& ||| | .|.|||||| &5' -----TCCATAAGATAGTGTGAT 3' USP18 hsa-miR-26a-1star beg:180 end:199 pic:3' GCACGTTCATTGGT---TCTTATCC 5'& |.|.|| |||||.| &5' --------TGATCAGTCAGAATGG- 3' USP18 hsa-miR-26a-2star beg:180 end:199 pic:3' CTTTGTTCATTAGT---TCTTATCC 5'& |.|||| |||||.| &5' --------TGATCAGTCAGAATGG- 3' USP18 hsa-miR-26bstar beg:302 end:322 pic:3' CTCGGTTCATTACCTCTTGTCC 5'& || |||.. |||||.||| &5' ---CCCAGTGG-GGAGAGCAG- 3' USP18 hsa-miR-27a beg:381 end:393 pic:3' CGCCTTGAATCGGTGACACTT 5'& | |||||| &5' -----------CTGCTGTGA- 3' USP18 hsa-miR-27b beg:381 end:393 pic:3' CGTCTTGAATCGGTGACACTT 5'& | |||||| &5' -----------CTGCTGTGA- 3' USP18 hsa-miR-3129 beg:367 end:391 pic:3' TTTGGTTAGAG-ATG-TGATGACG 5'& .||.| ||| |||.|||. &5' ---TCAGTATTATACAACTGCTGT 3' USP18 hsa-miR-3131 beg:194 end:216 pic:3' TTCC-GGGAAGGTGGTCAGGAGCT 5'& || . |||.|||||| | || &5' --GGATGCTTTCACCAG-CA--GA 3' USP18 hsa-miR-3136 beg:175 end:194 pic:3' TTACTGGGATGGATAAGTCAGTC 5'& | |||. |||||||| &5' ---GGTCCTGA----TCAGTCAG 3' USP18 hsa-miR-3136 beg:538 end:557 pic:3' TTACTGGGATGGATAAGTCAGTC 5'& .|||. || |||||| &5' -GTGATAA-ACA----CAGTCA- 3' USP18 hsa-miR-3144-5p beg:291 end:308 pic:3' GATATATAGAGAAA-CCAGGGGA 5'& ||. |||.||| &5' --------CTTCAGGGGTTCCC- 3' USP18 hsa-miR-3148 beg:26 end:47 pic:3' TTCGTGTGTGGTCAAAAAAGGT 5'& ||||.|.. ||||||| &5' ----ACACGCTGTCATTTTCCA 3' USP18 hsa-miR-3177 beg:240 end:260 pic:3' TGCACAGGGGTCACGGCACGT 5'& || |.|. |||.||||| &5' ----GTGCTCGCTGCTGTGCA 3' USP18 hsa-miR-3179 beg:515 end:529 pic:3' TGCAAATTTAAAGTGGGGAAGA 5'& |||.|.||||| &5' -----------TCATCTCTTCT 3' USP18 hsa-miR-3180-5p beg:324 end:344 pic:3' GCTGCACCCCGCCTCGCAGACCTTC 5'& ||||| .|| |||||..| &5' ----GTGGGA---GGCATCTGGGGG 3' USP18 hsa-miR-3190-5p beg:562 end:577 pic:3' AGAGACCGGCAGATGGAAGGTGT 5'& ||. |..||||||| &5' ---------GTT-ATTTTCCACA 3' USP18 hsa-miR-3196 beg:164 end:185 pic:3' CTCCGGGGACGG-CGGGGC 5'& ||||||||| | |.||.| &5' GAGGCCCCT-CAGGTCCTG 3' USP18 hsa-miR-330-3p beg:471 end:483 pic:3' AGAGACGTCCGGCACACGAAACG 5'& |||.||||. &5' --------------GTGTTTTGT 3' USP18 hsa-miR-339-5p beg:347 end:365 pic:3' GCACTCGAGGACC--TC-CTGTCCCT 5'& || || |.|||||. &5' -----------GGTCAGTGGCAGGGG 3' USP18 hsa-miR-33astar beg:82 end:105 pic:3' CACTACGTGACA-C-CTTTGTAAC 5'& |||| || | |||.||||| &5' ----TGCAATGAGGAGAAGCATTG 3' USP18 hsa-miR-365star beg:161 end:184 pic:3' TGT-CGACGGGGACTTTCAGGGA 5'& || | |||||| |.||||. &5' -CATGAGGCCCCTC-AGGTCCT- 3' USP18 hsa-miR-374b beg:358 end:381 pic:3' GTGAATCGTCCAA-----CATAATATA 5'& || .||| |||||||| &5' -----AGGGGGTATTTCAGTATTATA- 3' USP18 hsa-miR-4252 beg:306 end:326 pic:3' ACCACGACTGA-GTCACCGG 5'& ||| || ||||||| &5' --GTGGGGAGAGCAGTGGC- 3' USP18 hsa-miR-4252 beg:338 end:360 pic:3' ACCACGAC--TGAGTCACCGG 5'& || || . |||||||| &5' -GGGGCCAAAGGTCAGTGGC- 3' USP18 hsa-miR-4256 beg:178 end:195 pic:3' TGGAAGTAGTCCAGTCTA 5'& ||| |||| |||||| &5' -CCTG-ATCA-GTCAGA- 3' USP18 hsa-miR-4283 beg:107 end:131 pic:3' TTTGAGC----GACTCGGGGT 5'& ||||| |||||||..| &5' AAACTATATAACTGAGCCTTA 3' USP18 hsa-miR-4299 beg:198 end:213 pic:3' CGGAGAGTACAGTGGTCG 5'& ||.| |||||||| &5' GCTT------TCACCAGC 3' USP18 hsa-miR-4301 beg:315 end:333 pic:3' AGTGTTCACTTCATCACCCT 5'& .| ||||. ||||||| &5' --GC-AGTGGC--AGTGGGA 3' USP18 hsa-miR-4304 beg:49 end:68 pic:3' AC-GGGACCTGTACGGCC 5'& | .||||||. ||| &5' -GTTCCTGGATCTA-CGG 3' USP18 hsa-miR-4306 beg:510 end:528 pic:3' ATGACGGAAAGAGAGGT 5'& ||.|| |||||.| &5' TATTGATCATCTCTTC- 3' USP18 hsa-miR-4310 beg:411 end:427 pic:3' CCCTGTACTTACGACG 5'& |.|| |.|||||. &5' ---ATATCAGTGCTGT 3' USP18 hsa-miR-431 beg:242 end:265 pic:3' ACGTACTGCCGG-ACGTTCTGT 5'& ||| .| ||. ||||||||| &5' TGCTC-GCTGCTGTGCAAGACA 3' USP18 hsa-miR-4313 beg:352 end:367 pic:3' CCCAAACCCCGGTCCCCCGA 5'& | || |||||||. &5' ------GTGG-CAGGGGGT- 3' USP18 hsa-miR-4318 beg:535 end:555 pic:3' TCGTAC-ATGGGTGTCAC 5'& ||..|| || |||||| &5' AGTGTGATAAACACAGT- 3' USP18 hsa-miR-448 beg:140 end:162 pic:3' TACCCTGTAGGATG--TATACGTT 5'& ||||.||. |||||.|| &5' --GGGATATTATCAAAATATGTAA 3' USP18 hsa-miR-449cstar beg:304 end:328 pic:3' TGTCTCTCCTCACGTTGATCGTT 5'& ||| |.|||| |||. |.|||. &5' -CAGTGGGGAGAGCAG-TGGCAG 3' USP18 hsa-miR-490-5p beg:433 end:452 pic:3' TGGGTGGACCTCTAGGTACC 5'& ..|||.| |||| ||| &5' -TTCACTTTGAGAACCA--- 3' USP18 hsa-miR-510 beg:225 end:246 pic:3' CACTAACGGTGAG--AGGACTCAT 5'& || ||| |||||.||. &5' ------GCTGCTCGGTCCTGGGTG 3' USP18 hsa-miR-513c beg:437 end:449 pic:3' TATTTGCTGTGGAGGAACTCTT 5'& |.||||||| &5' -------------CTTTGAGAA 3' USP18 hsa-miR-516a-3p beg:324 end:337 pic:3' TGGGAGACTTTCCTTCGT 5'& | .|||.||| &5' -------GT-GGGAGGCA 3' USP18 hsa-miR-516b beg:4 end:24 pic:3' TTTCACGAAGAATGGAGGTCTA 5'& ||| ||||.|||| &5' ----TGCCCAAAACCTTCAGA- 3' USP18 hsa-miR-516bstar beg:324 end:337 pic:3' TGGGAGACTTTCCTTCGT 5'& | .|||.||| &5' -------GT-GGGAGGCA 3' USP18 hsa-miR-518cstar beg:4 end:26 pic:3' GTCTTTCACGAAG---GGAGGTCTCT 5'& ||| |||.|||||| &5' -------TGCCCAAAACCTTCAGAGA 3' USP18 hsa-miR-520f beg:88 end:104 pic:3' TTGGGAGATTTTC-CTTCGTGAA 5'& .|.| ||||||.| &5' ---------GAGGAGAAGCATT- 3' USP18 hsa-miR-524-5p beg:416 end:432 pic:3' CTCTTTCACGAAGGGAAACATC 5'& |||||| |||||| &5' -----AGTGCTG---TTTGTA- 3' USP18 hsa-miR-532-3p beg:311 end:335 pic:3' ACGTTCGGAACCCACACCCTCC 5'& | ||| ||| |||||||| &5' -GAGAGCAGTGGCAGTGGGAGG 3' USP18 hsa-miR-542-3p beg:17 end:41 pic:3' AAAGTCAATAGTTA---GACAGTGT 5'& ||||| || | ||||||. &5' -TTCAGAGATTGACACGCTGTCAT- 3' USP18 hsa-miR-544b beg:279 end:301 pic:3' AATCTT-TACGTGTTGGAGTCCA 5'& || .|| . |||.||||| &5' --AGCCTGTGGG-AACTTCAGG- 3' USP18 hsa-miR-545star beg:489 end:518 pic:3' AGTAGATTA----TTTGTAAATGACT 5'& ||||.|| |||.|||||.||| &5' TCATTTATTCAGCAAATATTTATTGA 3' USP18 hsa-miR-554 beg:402 end:426 pic:3' TGACCGACTC--AGTCCTGATCG 5'& ||||||||| |||| ||. &5' ACTGGCTGAATATCAGTGCTG-- 3' USP18 hsa-miR-589 beg:91 end:111 pic:3' GAGTCTCGTCTGCACCAAGAGT 5'& .||| .| |||.||| &5' ---GGAGAA-GCATTGTTTTCA 3' USP18 hsa-miR-637 beg:5 end:23 pic:3' TGCGTCTCGGGCTTTCGGGGGTCA 5'& |||| ||| ||..||| &5' -------GCCCAAAA-CCTTCAG- 3' USP18 hsa-miR-646 beg:321 end:341 pic:3' CGG-AGTCTCCGTCGACGAA 5'& || | .|||||| ||| &5' GCAGTGGGAGGCATCTG--- 3' USP18 hsa-miR-664 beg:352 end:376 pic:3' ACATCCGACCCCTATTTACTTAT 5'& || ||| ||||.|| | |.|| &5' -GT-GGCAGGGGGTATTTCAGTA 3' USP18 hsa-miR-668 beg:339 end:361 pic:3' CATCACCCGGC--TCGGCTCACTGT 5'& .| ||||| .|.| ||||.|| &5' --GG-GGGCCAAAGGTC-AGTGGCA 3' USP18 hsa-miR-920 beg:291 end:308 pic:3' ATGACGAAGGTGTCGAGGGG 5'& |||| . .|.|||| &5' -----CTTCAGGGGTTCCC- 3' USP18 hsa-miR-935 beg:469 end:488 pic:3' CGCCATCGCCTTCGC----CATTGACC 5'& |||.| ||||||| &5' ----------AAGTGTTTTGTAACTG- 3' USP18 hsa-miR-942 beg:84 end:100 pic:3' GTGTACCGGTTTTGTCTCTTCT 5'& ||| .|||||| &5' --------CAATGAGGAGAAG- 3' USP18 hsv1-miR-H14-5p beg:521 end:546 pic:3' GGACTCGGTCC-CTGCTCACGCTGA 5'& || ||| ||. ||||.||. &5' -CTTCTCCATAAGAT-AGTGTGAT- 3' USP18 hsv1-miR-H4 beg:96 end:119 pic:3' ACG-AACGGACAGTTTGAGATGG 5'& || |||..| ||||||| ||. &5' -GCATTGTTT-TCAAACTATAT- 3' USP18 hsv2-miR-H6 beg:31 end:49 pic:3' CGTAGGGGAGCGGAAGGTAA 5'& |. || ..||||||| &5' -----CTGTCATTTTCCATT 3' USP18 hsv2-miR-H7-5p beg:267 end:289 pic:3' GGAAACCAATGCCTGGGGAAA 5'& ||||| ||||.| ||. | &5' CCTTTAGTTATGAGCCTGT-- 3' USP18 kshv-miR-K12-10a beg:436 end:458 pic:3' CGGTGAGCCCCCCTGTTGTGAT 5'& .||||. | | |||||.|| &5' -TCACTTTGAGAACCAACATTA 3' USP18 kshv-miR-K12-10b beg:434 end:458 pic:3' CGGTGAGCCCCCCTGTTGTGGT 5'& .||||. | | |||||..| &5' -TCACTTTGAGAACCAACATTA 3' USP18 kshv-miR-K12-11 beg:83 end:105 pic:3' AGCCTGTG--TCCGATTCGTAATT 5'& .|| ||| |||||||. &5' ----GCAATGAGGAGAAGCATTG- 3'

DNA & RNA Element - SomamiR Gene Name Mutation Mutation ID miR ID Chromosome Location Ref Alt mirsite mirseed Seed Class Sample Name Cancer Type USP18 chr22:g.18167286C>T COSM3552084 hsa-let-7a-5p chr22 18167286 C T aactgTACCTCAaac UGAGGUAG m7a TCGA-ER-A197-06 [skin][NS][malignant_melanoma][NS] USP18 chr22:g.18167286C>T COSM3552084 hsa-let-7b-5p chr22 18167286 C T aactgTACCTCAaac UGAGGUAG m7a TCGA-ER-A197-06 [skin][NS][malignant_melanoma][NS] USP18 chr22:g.18167286C>T COSM3552084 hsa-let-7c-5p chr22 18167286 C T aactgTACCTCAaac UGAGGUAG m7a TCGA-ER-A197-06 [skin][NS][malignant_melanoma][NS] USP18 chr22:g.18167286C>T COSM3552084 hsa-let-7d-5p chr22 18167286 C T aactgTACCTCaaac AGAGGUAG m6b TCGA-ER-A197-06 [skin][NS][malignant_melanoma][NS] USP18 chr22:g.18167286C>T COSM3552084 hsa-let-7e-5p chr22 18167286 C T aactgTACCTCAaac UGAGGUAG m7a TCGA-ER-A197-06 [skin][NS][malignant_melanoma][NS] USP18 chr22:g.18167286C>T COSM3552084 hsa-let-7f-2-3p chr22 18167286 C T aaCTGTATctcaaac CUAUACAG m6c TCGA-ER-A197-06 [skin][NS][malignant_melanoma][NS] USP18 chr22:g.18167286C>T COSM3552084 hsa-let-7f-5p chr22 18167286 C T aactgTACCTCAaac UGAGGUAG m7a TCGA-ER-A197-06 [skin][NS][malignant_melanoma][NS] USP18 chr22:g.18167286C>T COSM3552084 hsa-let-7g-5p chr22 18167286 C T aactgTACCTCAaac UGAGGUAG m7a TCGA-ER-A197-06 [skin][NS][malignant_melanoma][NS] USP18 chr22:g.18167286C>T COSM3552084 hsa-let-7i-5p chr22 18167286 C T aactgTACCTCAaac UGAGGUAG m7a TCGA-ER-A197-06 [skin][NS][malignant_melanoma][NS] USP18 chr22:g.18167286C>T COSM3552084 hsa-miR-1185-1-3p chr22 18167286 C T aaCTGTATctcaaac AUAUACAG m6c TCGA-ER-A197-06 [skin][NS][malignant_melanoma][NS] USP18 chr22:g.18167286C>T COSM3552084 hsa-miR-1185-2-3p chr22 18167286 C T aaCTGTATctcaaac AUAUACAG m6c TCGA-ER-A197-06 [skin][NS][malignant_melanoma][NS] USP18 chr22:g.18167286C>T COSM3552084 hsa-miR-1294 chr22 18167286 C T aactgtACCTCAaac UGUGAGGU m6c TCGA-ER-A197-06 [skin][NS][malignant_melanoma][NS] USP18 chr22:g.18167286C>T COSM3552084 hsa-miR-1304-5p chr22 18167286 C T aactgtaCCTCAAAc UUUGAGGC m7a TCGA-ER-A197-06 [skin][NS][malignant_melanoma][NS] USP18 chr22:g.18167286C>T COSM3552084 hsa-miR-143-3p chr22 18167286 C T aactgtATCTCAaac UGAGAUGA m6a TCGA-ER-A197-06 [skin][NS][malignant_melanoma][NS] USP18 chr22:g.18167286C>T COSM3552084 hsa-miR-150-3p chr22 18167286 C T aacTGTACCtcaaac CUGGUACA m6c TCGA-ER-A197-06 [skin][NS][malignant_melanoma][NS] USP18 chr22:g.18167286C>T COSM3552084 hsa-miR-202-3p chr22 18167286 C T aactgTACCTCaaac AGAGGUAU m6b TCGA-ER-A197-06 [skin][NS][malignant_melanoma][NS] USP18 chr22:g.18167286C>T COSM3552084 hsa-miR-3915 chr22 18167286 C T aactgtaCCTCAAac UUGAGGAA m6a TCGA-ER-A197-06 [skin][NS][malignant_melanoma][NS] USP18 chr22:g.18167286C>T COSM3552084 hsa-miR-4458 chr22 18167286 C T aactgTACCTCaaac AGAGGUAG m6b TCGA-ER-A197-06 [skin][NS][malignant_melanoma][NS] USP18 chr22:g.18167286C>T COSM3552084 hsa-miR-4461 chr22 18167286 C T aactgtaTCTCAAac GAUUGAGA m6c TCGA-ER-A197-06 [skin][NS][malignant_melanoma][NS] USP18 chr22:g.18167286C>T COSM3552084 hsa-miR-4500 chr22 18167286 C T aactgTACCTCAaac UGAGGUAG m7a TCGA-ER-A197-06 [skin][NS][malignant_melanoma][NS] USP18 chr22:g.18167286C>T COSM3552084 hsa-miR-4689 chr22 18167286 C T aactgtaCCTCAAac UUGAGGAG m6a TCGA-ER-A197-06 [skin][NS][malignant_melanoma][NS] USP18 chr22:g.18167286C>T COSM3552084 hsa-miR-4770 chr22 18167286 C T aactgtATCTCAaac UGAGAUGA m6a TCGA-ER-A197-06 [skin][NS][malignant_melanoma][NS] USP18 chr22:g.18167286C>T COSM3552084 hsa-miR-580-3p chr22 18167286 C T aactgtaTCTCAAac UUGAGAAU m6a TCGA-ER-A197-06 [skin][NS][malignant_melanoma][NS] USP18 chr22:g.18167286C>T COSM3552084 hsa-miR-6134 chr22 18167286 C T aactgtACCTCAaac UGAGGUGG m6a TCGA-ER-A197-06 [skin][NS][malignant_melanoma][NS] USP18 chr22:g.18167286C>T COSM3552084 hsa-miR-6734-5p chr22 18167286 C T aactgtaCCTCAAac UUGAGGGG m6a TCGA-ER-A197-06 [skin][NS][malignant_melanoma][NS] USP18 chr22:g.18167286C>T COSM3552084 hsa-miR-7162-3p chr22 18167286 C T aactgtACCTCAaac UCUGAGGU m6c TCGA-ER-A197-06 [skin][NS][malignant_melanoma][NS] USP18 chr22:g.18167286C>T COSM3552084 hsa-miR-7854-3p chr22 18167286 C T aactgtACCTCAaac UGAGGUGA m6a TCGA-ER-A197-06 [skin][NS][malignant_melanoma][NS] USP18 chr22:g.18167286C>T COSM3552084 hsa-miR-98-5p chr22 18167286 C T aactgTACCTCAaac UGAGGUAG m7a TCGA-ER-A197-06 [skin][NS][malignant_melanoma][NS]

DNA & RNA Element - miRcode Gene Name Type microRNA Seed Position Seed Type Total Cons% Tr Region USP18 High_conserved miR-503 chr22:18659839 7-mer-m8 2 3pUTR USP18 High_conserved miR-7/7ab chr22:18652636 7-mer-A1 42 CDS USP18 High_conserved miR-138/138ab chr22:18659797 8-mer 4 3pUTR USP18 High_conserved miR-143/1721/4770 chr22:18660109 7-mer-m8 2 3pUTR USP18 High_conserved miR-148ab-3p/152 chr22:18652628 7-mer-m8 9 CDS USP18 High_conserved miR-15abc/16/16abc/195/322/424/497/1907 chr22:18644623 7-mer-m8 31 CDS USP18 High_conserved miR-181abcd/4262 chr22:18643012 7-mer-m8 20 CDS USP18 High_conserved miR-183 chr22:18650725 7-mer-m8 7 CDS USP18 High_conserved let-7/98/4458/4500 chr22:18650057 7-mer-A1 36 CDS, 5pUTR USP18 High_conserved miR-191 chr22:18659639 7-mer-m8 2 3pUTR USP18 High_conserved miR-199ab-5p chr22:18652612 8-mer 36 CDS USP18 High_conserved miR-200bc/429/548a chr22:18659962 8-mer 9 3pUTR USP18 High_conserved miR-205/205ab chr22:18650697 7-mer-A1 31 CDS USP18 High_conserved miR-214/761/3619-5p chr22:18642976 7-mer-m8 33 CDS USP18 High_conserved miR-214/761/3619-5p chr22:18647545 7-mer-A1 7 5pUTR USP18 High_conserved miR-216b/216b-5p chr22:18640330 7-mer-m8 7 5pUTR USP18 High_conserved miR-216b/216b-5p chr22:18659612 7-mer-m8 9 3pUTR USP18 High_conserved miR-216b/216b-5p chr22:18659668 7-mer-m8 22 3pUTR USP18 High_conserved miR-219-5p/508/508-3p/4782-3p chr22:18653559 7-mer-m8 24 CDS USP18 High_conserved miR-22/22-3p chr22:18640402 7-mer-m8 7 5pUTR USP18 High_conserved miR-221/222/222ab/1928 chr22:18672789 7-mer-m8 4 3pUTR USP18 High_conserved miR-24/24ab/24-3p chr22:18659712 7-mer-m8 7 3pUTR USP18 High_conserved miR-30abcdef/30abe-5p/384-5p chr22:18642954 7-mer-A1 38 CDS USP18 High_conserved miR-30abcdef/30abe-5p/384-5p chr22:18659567 7-mer-A1 36 CDS USP18 High_conserved miR-103a/107/107ab chr22:18650044 7-mer-m8 49 CDS, 5pUTR USP18 High_conserved miR-124/124ab/506 chr22:18642980 7-mer-A1 38 CDS USP18 High_conserved miR-124/124ab/506 chr22:18672763 7-mer-A1 9 3pUTR USP18 High_conserved miR-124/124ab/506 chr22:18672780 8-mer 9 3pUTR USP18 High_conserved miR-338/338-3p chr22:18644625 7-mer-A1 36 CDS USP18 High_conserved miR-338/338-3p chr22:18672688 7-mer-m8 7 CDS USP18 High_conserved miR-383 chr22:18659772 7-mer-A1 16 3pUTR USP18 High_conserved miR-129-5p/129ab-5p chr22:18632692 7-mer-A1 4 5pUTR USP18 High_conserved miR-499-5p chr22:18672864 7-mer-m8 9 3pUTR USP18 Medium_conserved miR-544/544ab/544-3p chr22:18644650 7-mer-A1 20 CDS USP18 Medium_conserved miR-544/544ab/544-3p chr22:18644689 7-mer-m8 18 CDS USP18 Medium_conserved miR-544/544ab/544-3p chr22:18650739 7-mer-A1 24 CDS USP18 Medium_conserved miR-873 chr22:18659643 7-mer-m8 18 3pUTR USP18 Medium_conserved miR-876-5p/3167 chr22:18656598 7-mer-m8 9 CDS USP18 Medium_conserved miR-136 chr22:18650729 7-mer-A1 18 CDS USP18 Medium_conserved miR-136 chr22:18672614 7-mer-A1 4 CDS USP18 Medium_conserved miR-149 chr22:18653646 7-mer-A1 4 CDS USP18 Medium_conserved miR-185/882/3473/4306/4644 chr22:18647648 7-mer-A1 4 5pUTR USP18 Medium_conserved miR-197 chr22:18672733 8-mer 4 3pUTR USP18 Medium_conserved miR-197 chr22:18672824 7-mer-m8 4 3pUTR USP18 Medium_conserved miR-202-3p chr22:18650057 7-mer-A1 36 CDS, 5pUTR USP18 Medium_conserved miR-290-5p/292-5p/371-5p/293 chr22:18660031 7-mer-A1 4 3pUTR USP18 Medium_conserved miR-300/381/539-3p chr22:18659989 8-mer 0 3pUTR USP18 Medium_conserved miR-326/330/330-5p chr22:18640558 8-mer 11 CDS USP18 Medium_conserved miR-326/330/330-5p chr22:18647565 7-mer-m8 7 5pUTR USP18 Medium_conserved miR-326/330/330-5p chr22:18653630 7-mer-m8 18 CDS USP18 Medium_conserved miR-328a/328b-3p chr22:18659932 7-mer-A1 7 3pUTR USP18 Medium_conserved miR-329/329ab/362-3p chr22:18672693 7-mer-m8 0 CDS USP18 Medium_conserved miR-340-5p chr22:18659721 7-mer-A1 27 3pUTR USP18 Medium_conserved miR-342-3p chr22:18652677 7-mer-A1 16 CDS USP18 Medium_conserved miR-346 chr22:18655971 7-mer-m8 11 CDS USP18 Medium_conserved miR-374ab chr22:18659965 7-mer-m8 2 3pUTR USP18 Medium_conserved miR-431 chr22:18659848 8-mer 9 3pUTR USP18 Medium_conserved miR-433 chr22:18660144 7-mer-A1 7 3pUTR USP18 Medium_conserved miR-488 chr22:18672835 7-mer-A1 9 3pUTR

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score USP18 RAID00039463 hsa-miR-597-3p miRNA MIMAT0026619 USP18 mRNA 11274 Prediction 0.1828 USP18 RAID00164577 hsa-miR-4434 miRNA MIMAT0018950 USP18 mRNA 11274 Prediction 0.1828 USP18 RAID00292509 hsa-miR-3157-5p miRNA MIMAT0015031 USP18 mRNA 11274 Prediction 0.1828 USP18 RAID00308301 hsa-miR-99a-5p miRNA MIMAT0000097 USP18 mRNA 11274 Prediction 0.1828 USP18 RAID00351830 hsa-miR-374a-5p miRNA MIMAT0000727 USP18 mRNA 11274 Prediction 0.1828 USP18 RAID00400115 hsa-miR-24-3p miRNA MIMAT0000080 USP18 mRNA 11274 Prediction 0.2202 USP18 RAID00531141 hsa-miR-138-5p miRNA MIMAT0000430 USP18 mRNA 11274 Prediction 0.1828 USP18 RAID00562326 hsa-miR-17-5p miRNA MIMAT0000070 USP18 mRNA 11274 Prediction 0.1828 USP18 RAID00597913 hsa-miR-143-3p miRNA MIMAT0000435 USP18 mRNA 11274 Prediction 0.1828 USP18 RAID00599500 hsa-miR-342-3p miRNA MIMAT0000753 USP18 mRNA 11274 Prediction 0.1828 USP18 RAID00692619 hsa-miR-340-5p miRNA MIMAT0004692 USP18 mRNA 11274 Prediction 0.2202 USP18 RAID00779981 hsa-miR-29c-3p miRNA MIMAT0000681 USP18 mRNA 11274 Prediction 0.1828 USP18 RAID00816133 hsa-miR-191-5p miRNA MIMAT0000440 USP18 mRNA 11274 Prediction 0.2202 USP18 RAID00841930 hsa-miR-4427 miRNA MIMAT0018942 USP18 mRNA 11274 Prediction 0.1828 USP18 RAID01117109 hsa-miR-93-5p miRNA MIMAT0000093 USP18 mRNA 11274 Prediction 0.1828 USP18 RAID01131495 hsa-miR-5703 miRNA MIMAT0022496 USP18 mRNA 11274 Prediction 0.1828 USP18 RAID01185980 hsa-miR-374b-5p miRNA MIMAT0004955 USP18 mRNA 11274 Prediction 0.1828 USP18 RAID01228170 hsa-miR-429 miRNA MIMAT0001536 USP18 mRNA 11274 Prediction 0.1828 USP18 RAID01233533 hsa-miR-223-3p miRNA MIMAT0000280 USP18 mRNA 11274 Prediction 0.1828 USP18 RAID01249578 hsa-miR-431-5p miRNA MIMAT0001625 USP18 mRNA 11274 Prediction 0.1828 USP18 RAID01371362 hsa-miR-433-3p miRNA MIMAT0001627 USP18 mRNA 11274 Prediction 0.1828 USP18 RAID01472979 hsa-miR-29a-3p miRNA MIMAT0000086 USP18 mRNA 11274 Prediction 0.1828 USP18 RAID01490795 hsa-miR-519d-3p miRNA MIMAT0002853 USP18 mRNA 11274 Prediction 0.1828 USP18 RAID01581021 hsa-miR-20b-5p miRNA MIMAT0001413 USP18 mRNA 11274 Prediction 0.1828 USP18 RAID01644798 hsa-miR-371a-5p miRNA MIMAT0004687 USP18 mRNA 11274 Prediction 0.1828 USP18 RAID01677283 hsa-miR-29b-3p miRNA MIMAT0000100 USP18 mRNA 11274 Prediction 0.1828 USP18 RAID01851530 hsa-miR-873-5p miRNA MIMAT0004953 USP18 mRNA 11274 Prediction 0.1828 USP18 RAID01928576 hsa-miR-520g-3p miRNA MIMAT0002858 USP18 mRNA 11274 Prediction 0.1828 USP18 RAID02107847 hsa-miR-200b-3p miRNA MIMAT0000318 USP18 mRNA 11274 Prediction 0.1828 USP18 RAID02291897 hsa-miR-99b-5p miRNA MIMAT0000689 USP18 mRNA 11274 Prediction 0.1828 USP18 RAID02294592 hsa-miR-134-5p miRNA MIMAT0000447 USP18 mRNA 11274 Prediction 0.1828 USP18 RAID02307383 hsa-miR-506-3p miRNA MIMAT0002878 USP18 mRNA 11274 Prediction 0.1828 USP18 RAID02352546 hsa-miR-215-5p miRNA MIMAT0000272 USP18 mRNA 11274 Microarray 0.5483 USP18 RAID02452816 hsa-miR-155-5p miRNA MIMAT0000646 USP18 mRNA 11274 Prediction 0.1828 USP18 RAID02462776 hsa-miR-653-5p miRNA MIMAT0003328 USP18 mRNA 11274 Prediction 0.1828 USP18 RAID02595437 hsa-miR-520h miRNA MIMAT0002867 USP18 mRNA 11274 Prediction 0.1828 USP18 RAID02611165 hsa-miR-192-5p miRNA MIMAT0000222 USP18 mRNA 11274 Microarray 0.5483 USP18 RAID02611279 hsa-miR-4279 miRNA MIMAT0016909 USP18 mRNA 11274 Prediction 0.1828 USP18 RAID02626346 hsa-miR-425-5p miRNA MIMAT0003393 USP18 mRNA 11274 Prediction 0.1828 USP18 RAID02931168 hsa-miR-495-3p miRNA MIMAT0002817 USP18 mRNA 11274 Prediction 0.1828 USP18 RAID02971973 hsa-miR-20a-5p miRNA MIMAT0000075 USP18 mRNA 11274 Prediction 0.1828 USP18 RAID03027067 hsa-miR-381-3p miRNA MIMAT0000736 USP18 mRNA 11274 Prediction 0.1828 USP18 RAID03092131 hsa-miR-200c-3p miRNA MIMAT0000617 USP18 mRNA 11274 Prediction 0.1828 USP18 RAID03130533 hsa-miR-4694-3p miRNA MIMAT0019787 USP18 mRNA 11274 Prediction 0.1828 USP18 RAID03155615 hsa-miR-4531 miRNA MIMAT0019070 USP18 mRNA 11274 Prediction 0.1828 USP18 RAID03256328 hsa-miR-4516 miRNA MIMAT0019053 USP18 mRNA 11274 Prediction 0.1828 USP18 RAID03296179 hsa-miR-100-5p miRNA MIMAT0000098 USP18 mRNA 11274 Prediction 0.1828 USP18 RAID03318305 hsa-miR-106b-5p miRNA MIMAT0000680 USP18 mRNA 11274 Prediction 0.1828 USP18 RAID03359832 hsa-miR-26b-5p miRNA MIMAT0000083 USP18 mRNA 11274 Microarray 0.5483 USP18 RAID03563814 hsa-miR-300 miRNA MIMAT0004903 USP18 mRNA 11274 Prediction 0.1828 USP18 RAID03596463 hsa-miR-106a-5p miRNA MIMAT0000103 USP18 mRNA 11274 Prediction 0.1828 USP18 RAID03773442 hsa-miR-503-5p miRNA MIMAT0002874 USP18 mRNA 11274 Prediction 0.1828 USP18 RAID03779282 hsa-miR-377-3p miRNA MIMAT0000730 USP18 mRNA 11274 Prediction 0.1828 USP18 RAID03973561 hsa-miR-146a-3p miRNA MIMAT0004608 USP18 mRNA 11274 Prediction 0.1828 USP18 RAID04044889 hsa-miR-216b-5p miRNA MIMAT0004959 USP18 mRNA 11274 Prediction 0.2202 USP18 RAID04052846 hsa-miR-221-3p miRNA MIMAT0000278 USP18 mRNA 11274 Reporter Assay//Microarray 0.8785