DNA & RNA Element - UTRdb | Gene Name | Type | ASPicDB | UTRaspic | Refseq ID | Genome | ISG15 | 3'UTR | 15f5ab1d8a | BA053911 | NM_005101 | chr1:939722-939783:+ | ISG15 | 3'UTR | 15fbb29e96 | BA053912 | NM_005101 | chr1:939722-939787:+ | ISG15 | 3'UTR | 3f02924315 | BA053913 | NM_005101 | chr1:939722-939787:+ | ISG15 | 3'UTR | b856b323a6 | BA053914 | NM_005101 | chr1:939722-939783:+ | ISG15 | 5'UTR | 15f5ab1d8a | CA083398 | NM_005101 | chr1:938710-938816:+ | ISG15 | 5'UTR | 15fbb29e96 | CA083399 | NM_005101 | chr1:926381-939247:+ | ISG15 | 5'UTR | 3f02924315 | CA083400 | NM_005101 | chr1:926388-939247:+ | ISG15 | 5'UTR | b856b323a6 | CA083401 | NM_005101 | chr1:938740-938816:+ | |
DNA & RNA Element - circBase | circRNA ID | Chrom | Start | End | Strand | hsa_circ_0009211 | chr1 | 949363 | 949919 | + | |
DNA & RNA Element - CircNet | Circ ID | GITPosition | Express | Symbol | Entrez | Category | Strand | Refered Name | hsa-circ-ISG15-antisense.1 | NM_005101Tchr1:949569-949699 | expressed | ISG15 | 9636 | protein-coding | - | not_available | hsa-circ-ISG15-antisense.2 | NM_005101Tchr1:949662-949734 | expressed | ISG15 | 9636 | protein-coding | - | not_available | hsa-circ-ISG15-antisense.3 | NM_005101Tchr1:948897-949601 | expressed | ISG15 | 9636 | protein-coding | - | not_available | hsa-circ-ISG15-overlap.1 | NM_005101Tchr1:949489-949690 | expressed | ISG15 | 9636 | protein-coding | + | not_available | hsa-circ-ISG15.1 | NM_005101Tchr1:949363-949919 | expressed | ISG15 | 9636 | protein-coding | + | hsa_circ_0009211 | |
DNA & RNA Element - miRTarBase | Target Gene (Entrez ID) | miRTarBase ID | miRNA | Species (miRNA) | Target Gene | Species (Target Gene) | Experiments | Support Type | References (PMID) | MIRT021235 | hsa-miR-146a-5p | Homo sapiens | ISG15 | 9636 | Homo sapiens | Microarray | Functional MTI (Weak) | 18057241 | MIRT023954 | hsa-miR-1-3p | Homo sapiens | ISG15 | 9636 | Homo sapiens | Microarray | Functional MTI (Weak) | 18668037 | |
DNA & RNA Element - microRNA | Mirbase Acc | miRNA Name | Gene ID | Gene Symbol | miRNA Alignment | Alignment | Gene Alignment | miRNA Start | miRNA End | Gene Start | Gene End | Genome Coordinates | Conservation | Align Score | Seed Cat | Energy | mirSVR Score | MIMAT0003282 | hsa-miR-614 | 9636 | ISG15 | ggugGACCGUUCUUGUCCG-CAAg | | || || || |||| ||| | agggCCGGAAAUAA-AGGCUGUUg | 2 | 20 | 30 | 52 | [hg19:1:949888-949910:+] | 0.4568 | 121 | 0 | -16.97 | -1.0819 | MIMAT0005825 | hsa-miR-1180 | 9636 | ISG15 | ugugugggugcgCUCGGCCUUu | |:||||||| | gagcaggaucaaGGGCCGGAAa | 2 | 11 | 19 | 40 | [hg19:1:949877-949898:+] | 0.4656 | 146 | 7 | -23.48 | -0.2710 | MIMAT0000430 | hsa-miR-138 | 9636 | ISG15 | gccggacuaaguguuGUGGUCGa | ||||||| | --------gggccucCACCAGCa | 2 | 9 | 1 | 15 | [hg19:1:949859-949873:+] | 0.4656 | 140 | 7 | -18.64 | -0.2197 | |
DNA & RNA Element - TRANSFAC | Accession | AS | Description | Species | Entrez | Pubmed | Binding Info | G000325 | MO000022672 | ISG15 | Homo sapiens | 9636 | 2460869 | 0 0 R35238; HS$ISG15_10; Binding factors: IRF-1 // 0 0 R26723; HS$ISG15_09; Binding factors: IRF-1 , IRF-9:STAT2 , ISGF-3 , STAT1 , STAT2 | |
DNA & RNA Element - miRWalk | Gene Name | miRNAname | Entrez ID | Pathways | ISG15 | hsa-miR-1 | 9636 | hsa04622_RIG I like receptor signaling pathway | ISG15 | hsa-miR-146a-5p | 9636 | hsa04622_RIG I like receptor signaling pathway | |
DNA & RNA Element - TargetScan | Gene Name | UTR Region Start | UTR Region End | AIR | Total Normalized 3P-seq-tags & Pseudocounts | Strand | hg19_chromosome | Genome Start | Genome End | ISG15; G1P2; UCRP | 1 | 58 | 100 | 380.525 | + | chr1 | 949858 | 949916 | ISG15; G1P2; UCRP | 59 | 62 | 1.317 | 380.525 | + | chr1 | 949916 | 949920 | |
DNA & RNA Element - RepTar | Gene Name | miRNA | Begin | End | Profile | ISG15 | hsa-miR-1180 | beg:19 | end:41 | pic:3' TGTGTGGGTGCGCTCGGCCTTT 5'& .|| . || |.|||||||| &5' GCAGGATCAA--GGGCCGGAAA 3' | ISG15 | hsa-miR-1268 | beg:1 | end:20 | pic:3' GGGGGTGGTGGTGCGGGC 5'& ||.|||||| ||. ||| &5' CCTCCACCAGCAT--CCG 3' | ISG15 | hsa-miR-1301 | beg:41 | end:56 | pic:3' CTTCAGTGAGGGTCCGTCGACGTT 5'& |||| |.||.|| &5' ------------AGGCTGTTGTAA 3' | ISG15 | hsa-miR-1322 | beg:8 | end:30 | pic:3' GTCGTAG--TCGTCGTAGTAG 5'& ||||||| ||||| |||| &5' CAGCATCCGAGCAGGATCA-- 3' | ISG15 | hsa-miR-132 | beg:33 | end:53 | pic:3' GCTGGTACCGACA--TCTGACAAT 5'& || ||.|||||. &5' -------GGAAATAAAGGCTGTTG 3' | ISG15 | hsa-miR-212 | beg:29 | end:53 | pic:3' CCGGCACTGACC-TCTGACAAT 5'& ||||| || ||.|||||. &5' GGCCG-GAAATAAAGGCTGTTG 3' | ISG15 | hsa-miR-3140 | beg:30 | end:49 | pic:3' TGATGGACTTAAGGGTTTTCGA 5'& .|| ||| .|||.||| &5' ---GCCGGAAA---TAAAGGCT 3' | |
DNA & RNA Element - miRcode | Gene Name | Type | microRNA | Seed Position | Seed Type | Total Cons% | Tr Region | ISG15 | High_conserved | miR-138/138ab | chr1:949873 | 8-mer | 13 | 3pUTR | ISG15 | High_conserved | miR-193/193b/193a-3p | chr1:948912 | 7-mer-A1 | 9 | 5pUTR | ISG15 | High_conserved | miR-214/761/3619-5p | chr1:949580 | 7-mer-m8 | 33 | CDS | ISG15 | High_conserved | miR-31 | chr1:949544 | 7-mer-A1 | 13 | CDS | ISG15 | High_conserved | miR-338/338-3p | chr1:949392 | 7-mer-m8 | 38 | CDS | ISG15 | High_conserved | miR-10abc/10a-5p | chr1:949534 | 7-mer-m8 | 11 | CDS | ISG15 | Medium_conserved | miR-504/4725-5p | chr1:949535 | 7-mer-m8 | 7 | CDS | ISG15 | Medium_conserved | miR-615-3p | chr1:948814 | 7-mer-m8 | 2 | 5pUTR | ISG15 | Medium_conserved | miR-339b/339-5p/3586-5p | chr1:949533 | 7-mer-m8 | 11 | CDS | ISG15 | Medium_conserved | miR-370 | chr1:949884 | 7-mer-A1 | 7 | 3pUTR | ISG15 | Medium_conserved | miR-125a-3p/1554 | chr1:949682 | 7-mer-A1 | 11 | CDS | ISG15 | Medium_conserved | miR-433 | chr1:949812 | 7-mer-A1 | 29 | CDS | ISG15 | Medium_conserved | miR-486-5p/3107 | chr1:948917 | 8-mer | 11 | 5pUTR | |
DNA & RNA Element - RAID2 | Gene Name | RAID ID | Interactor 1 | Category 1 | ID 1 | Interactor 2 | Category 2 | ID 2 | Methods | Score | ISG15 | RAID00492767 | hcmv-miR-US29-3p | miRNA | MIMAT0028168 | ISG15 | mRNA | 9636 | RT-PCR | 0.7311 | ISG15 | RAID00989464 | hcmv-miR-US5-2-3p | miRNA | MIMAT0001580 | ISG15 | mRNA | 9636 | RT-PCR | 0.7311 | ISG15 | RAID01101078 | hcmv-miR-US25-2-3p | miRNA | MIMAT0001583 | ISG15 | mRNA | 9636 | RT-PCR | 0.7311 | ISG15 | RAID01106725 | hcmv-miR-US5-1 | miRNA | MIMAT0001579 | ISG15 | mRNA | 9636 | RT-PCR | 0.7311 | ISG15 | RAID02202047 | hsa-miR-1-3p | miRNA | MIMAT0000416 | ISG15 | mRNA | 9636 | Microarray | 0.5483 | ISG15 | RAID02997740 | hsa-miR-138-5p | miRNA | MIMAT0000430 | ISG15 | mRNA | 9636 | Prediction | 0.1828 | ISG15 | RAID03114070 | hsa-miR-146a-5p | miRNA | MIMAT0000449 | ISG15 | mRNA | 9636 | Microarray | 0.5483 | ISG15 | RAID03345562 | hcmv-miR-UL36-3p | miRNA | MIMAT0004754 | ISG15 | mRNA | 9636 | RT-PCR | 0.7311 | ISG15 | RAID04714266 | FENDRR | lncRNA | 400550 | ISG15 | protein | 9636 | Microarray//RNA-seq | 0.6606 | |