SNP - dbSNP |
dbSNP | Type | Alleles | Het | Se(het) | Fxn-class | Gene Name | Assembly | Chr-pos | Sequence | Entrez Gene |
rs13581 | snp | A/C | 0.0121415 | 0.0769634 | downstream-variant-500B, utr-variant-3-prime | SPTAN1, WDR34 | GRCh38.p7 | 9:128633739 | CACCCGCCTCCCGGG[A/C]CCCCTCAGGCCGCCA | 6709 |
rs945829 | snp | A/G | 0.00597247 | 0.0543191 | intron-variant | SPTAN1 | GRCh38.p7 | 9:128577619 | TGTCAGGTATCACCT[A/G]CAAATGCAAATCACT | 6709 |
rs945830 | snp | C/T | 0.0170251 | 0.090679 | intron-variant | SPTAN1 | GRCh38.p7 | 9:128599633 | aagcaatcctcccac[C/T]tcagcctcccaggta | 6709 |
rs945831 | snp | C/T | 0.0208818 | 0.100024 | SPTAN1 | 9 | allele_origin=T(germline)/C(germline) | 9:128600082 | TTTCTTTGAATAGGA[C/T]GAAACTGATTCCAAG | 6709 |
rs945832 | snp | C/T | 0.0573587 | 0.15934 | intron-variant | SPTAN1 | GRCh38.p7 | 9:128559022 | CAATTACAGGAGACA[C/T]CAAAAAACATTATGG | 6709 |
rs945833 | snp | A/G | 0.0569829 | 0.158885 | intron-variant | SPTAN1 | GRCh38.p7 | 9:128558792 | ATGTCAGCTCAGCTC[A/G]GCCTGGGCGTGCCAC | 6709 |
rs945834 | snp | C/G | 0.39979 | 0.200158 | intron-variant | SPTAN1 | GRCh38.p7 | 9:128558260 | TTCAGCAAGTAATGC[C/G]AATCTCAGGGGGATA | 6709 |
rs945835 | snp | C/T | 0.0603597 | 0.1629 | intron-variant | SPTAN1 | GRCh38.p7 | 9:128557268 | TCAGCAAGTTGAATG[C/T]ACTGGATGTAAGAGA | 6709 |
rs953665 | snp | C/G | 0.475348 | 0.108251 | intron-variant | SPTAN1 | GRCh38.p7 | 9:128619649 | agatgaggtcattag[C/G]gtggaccctaatcca | 6709 |
rs953666 | snp | C/G | 0.4628 | 0.13121 | intron-variant | SPTAN1 | GRCh38.p7 | 9:128619583 | GTGAATAGACACACA[C/G]AGTGATGCCAAGTGA | 6709 |
rs1048236 | snp | C/T | 0 | 0 | SPTAN1 | 9 | allele_origin=T(germline)/C(germline) | 9:128605330 | CAGCAGAGCGCCTGA[C/T]CCAGTCCCATCCCGA | 6709 |
rs1129922 | snp | A/G | | | missense | SPTAN1 | GRCh38.p7 | 9:128584297 | GACCGAATTGATGGC[A/G]TCACCATTCAGGCCC | 6709 |
rs1129924 | snp | A/T | | | missense | SPTAN1 | GRCh38.p7 | 9:128612226 | ACAGGGATCAAGGAC[A/T]TTGACTTCTGGCTGT | 6709 |
rs1337555 | snp | A/C | | | intron-variant, upstream-variant-2KB | SPTAN1 | GRCh38.p7 | 9:128554056 | TTGACCTTTCAAAAT[A/C]TAAGACATTAGTTAG | 6709 |
rs1415568 | snp | A/G | 0.00813715 | 0.0632642 | SPTAN1 | 9 | allele_origin=G(germline)/A(germline) | 9:128613422 | TTATGGCAAAGACCT[A/G]GCTTCTGTGAACAAC | 6709 |
rs1572914 | snp | A/G | 0.394721 | 0.203852 | intron-variant | SPTAN1 | GRCh38.p7 | 9:128627265 | CCCCAAAGATGAGAG[A/G]AGGAGGCTGGGAGAC | 6709 |
rs1803171 | snp | G/T | | | utr-variant-3-prime, downstream-variant-500B | SPTAN1, WDR34 | GRCh38.p7 | 9:128633490 | ACTAACCCGCTTCCG[G/T]TCCAGTCACAATCAT | 6709 |
rs1890101 | snp | A/C | | | | | GRCh38.p7 | 9:128559474 | GTGTATGGTGCTGTT[A/C]TGCCTCCTATCACAG | 6709 |
rs1890102 | snp | C/T | 0.00358779 | 0.0422022 | | | GRCh38.p7 | 9:128554295 | TATCAGAGAATCAGT[C/T]ACTAGGCTGATGGTT | 6709 |
rs1890103 | snp | C/T | 0.0583345 | 0.161527 | | | GRCh38.p7 | 9:128578360 | GTTATTCACAGGTGT[C/T]TCTCATCATGAGGAT | 6709 |
rs1890104 | snp | A/T | 0.434976 | 0.168179 | | | GRCh38.p7 | 9:128578531 | ATTGATCCTTTGTGA[A/T]GTAAAAAGTATTTGT | 6709 |
rs1890105 | snp | C/T | 0.0667028 | 0.170006 | | | GRCh38.p7 | 9:128578595 | CAGCACTTTGGAAGG[C/T]CGAGGCGGGTGGATC | 6709 |
rs1984180 | snp | C/T | | | intron-variant | SPTAN1 | GRCh38.p7 | 9:128563004 | atatatatatatata[C/T]atatatatatacaca | 6709 |
rs1984181 | snp | C/T | | | intron-variant | SPTAN1 | GRCh38.p7 | 9:128562992 | atatatatatatata[C/T]acatacatgtatata | 6709 |
rs1984182 | snp | C/T | | | intron-variant | SPTAN1 | GRCh38.p7 | 9:128562990 | atatatatatataca[C/T]atacatgtatatata | 6709 |
rs1984183 | snp | C/T | | | intron-variant | SPTAN1 | GRCh38.p7 | 9:128562986 | atatatatacacata[C/T]atgtatatatatatt | 6709 |
rs1984184 | snp | A/G | 0.0573587 | 0.15934 | intron-variant | SPTAN1 | GRCh38.p7 | 9:128562887 | AGCTCCACCTCCTGG[A/G]TTCACGCCATTCTCC | 6709 |
rs1984185 | snp | A/G | 0.0573587 | 0.15934 | intron-variant | SPTAN1 | GRCh38.p7 | 9:128564351 | TTGAACCCGGGATGC[A/G]GAGGTTTCAATGAGC | 6709 |
rs1984186 | snp | C/T | 0.190205 | 0.242744 | intron-variant | SPTAN1 | GRCh38.p7 | 9:128564436 | aaaaaaaaaaaaaat[C/T]agccagtcatggtgg | 6709 |
rs1999831 | snp | A/G | 0.0569829 | 0.158885 | intron-variant | SPTAN1 | GRCh38.p7 | 9:128565764 | TTCCAGGGTAACACA[A/G]TTTTATACCTTTTAT | 6709 |
rs2050629 | snp | A/G | 0.0569829 | 0.158885 | intron-variant | SPTAN1 | GRCh38.p7 | 9:128558761 | ATTCCTTCCACAACC[A/G]AGGCTGCATGCTGCA | 6709 |
rs2050630 | snp | G/T | 0.0603597 | 0.1629 | intron-variant | SPTAN1 | GRCh38.p7 | 9:128556301 | CTAAATTTTTTTTTT[G/T]TGAAAAAGGTCCGAC | 6709 |
rs2065951 | snp | C/T | 0.0298908 | 0.118541 | intron-variant | SPTAN1 | GRCh38.p7 | 9:128611326 | aatagaaaaattagc[C/T]gggtgtgatgtcatg | 6709 |
rs2095668 | snp | A/G | 0.151001 | 0.229563 | intron-variant | SPTAN1 | GRCh38.p7 | 9:128589337 | tctgtcacccaggct[A/G]gagtgcagtggcacg | 6709 |
rs2152833 | snp | C/T | 0.471578 | 0.115772 | intron-variant | SPTAN1 | GRCh38.p7 | 9:128569041 | CCTTAAGAAGTTACC[C/T]GAATCCTGCCTTTGT | 6709 |
rs2184932 | snp | A/G | 0.474544 | 0.10991 | intron-variant | SPTAN1 | GRCh38.p7 | 9:128628369 | CTGGGGGCTCAGGCA[A/G]GGTACAGTAAGTCCA | 6709 |
rs2227862 | snp | C/T | 0.330265 | 0.236765 | SPTAN1 | 9 | allele_origin=G(germline)/T(germline)/C(germline) | 9:128617688 | CGGCCGGGACCTAAC[C/T]GGCGTGCAGAACCTG | 6709 |
rs2227863 | snp | A/G | 9.88484e-05 | 0.00702954 | missense | SPTAN1 | GRCh38.p7 | 9:128578178 | TGAAAGCCCTCATCA[A/G]TGCAGATGAGCTTGC | 6709 |
rs2227864 | snp | C/T | 0.312265 | 0.242122 | SPTAN1 | 9 | allele_origin=G(germline)/T(germline)/C(germline) | 9:128598471 | GGAGTCTGAAGGTCT[C/T]ATGGCAGAGGAGGTG | 6709 |
rs2227865 | snp | A/G | 0.0134005 | 0.0807506 | SPTAN1 | 9 | allele_origin=G(germline)/A(germline) | 9:128594259 | GTTGTTCCGTGAAGC[A/G]AATGAACTACAGCAA | 6709 |
rs2228951 | snp | C/T | 0.0031742 | 0.0397118 | SPTAN1 | 9 | allele_origin=T(germline)/C(germline) | 9:128608195 | GGCCTTCTTGAATAC[C/T]GAAGACAAAGGAGAC | 6709 |
rs2228952 | snp | A/C/T | 0.0146655 | 0.0843685 | SPTAN1, WDR34 | 9 | allele_origin=T(germline)/C(germline) | 9:128633289 | CCGCGAGCTCCCCAC[A/C/T]GCGTTCGACTACGTG | 6709 |
rs2275257 | snp | C/G/T | 0.0295035 | 0.117819 | intron-variant | SPTAN1 | GRCh38.p7 | 9:128566561 | AGGGGAATGGATGGC[C/G/T]GTTTTTAATAAAGAA | 6709 |
rs2275258 | snp | A/G | 0.0345262 | 0.126772 | intron-variant | SPTAN1 | GRCh38.p7 | 9:128576719 | CTTGTGATTCTCTTC[A/G]GAGTGGTGATTTGCT | 6709 |
rs2275259 | snp | A/G | 0.0345262 | 0.126772 | intron-variant | SPTAN1 | GRCh38.p7 | 9:128582048 | ACATGCTATCTCGTT[A/G]AAGACATAATACAAC | 6709 |
rs2297767 | snp | C/T | 0.0905309 | 0.192535 | intron-variant | SPTAN1 | GRCh38.p7 | 9:128575023 | CTGAGACAGAAATGC[C/T]GTGAACTCAACCTCT | 6709 |
rs2297768 | snp | C/T | 0.471004 | 0.116864 | intron-variant | SPTAN1 | GRCh38.p7 | 9:128575110 | AAGCTAACATGGCTC[C/T]GTCCCTAATGTGTCT | 6709 |
rs2297769 | snp | A/C | 0.02845 | 0.115836 | SPTAN1 | 9 | allele_origin=A(germline)/C(germline) | 9:128575382 | GCTTCTCACAACATT[A/C]TTATGTTAACTTTTT | 6709 |
rs2297770 | snp | A/G | 0.0345262 | 0.126772 | intron-variant | SPTAN1 | GRCh38.p7 | 9:128575398 | TTATGTTAACTTTTT[A/G]GTATATTCAGGATAA | 6709 |
rs2297771 | snp | A/G | 0.458545 | 0.137872 | intron-variant | SPTAN1 | GRCh38.p7 | 9:128575564 | GGAAGGGCAGAGTTC[A/G]TTTGATCTGTTTCCT | 6709 |
rs3737308 | snp | A/G | 0.33004 | 0.236841 | SPTAN1 | 9 | allele_origin=G(germline)/A(germline) | 9:128626364 | AGAGACTGAGTTGGC[A/G]GAGTCGCCAGGGCTG | 6709 |
rs3750332 | snp | C/G | 0.440333 | 0.16209 | intron-variant | SPTAN1 | GRCh38.p7 | 9:128617870 | CAGGTTTGGACTGAG[C/G]GGTCATGAACACTTT | 6709 |
rs3750333 | snp | G/T | 0.045811 | 0.144246 | SPTAN1 | 9 | allele_origin=G(germline)/T(germline) | 9:128617719 | GTTCTGCTTCCAGCC[G/T]CTTGTGCTTCTTCCT | 6709 |
rs3763599 | snp | A/G | 0.372391 | 0.217992 | intron-variant | SPTAN1 | GRCh38.p7 | 9:128569171 | GTGAATTTAACATTT[A/G]TAAGTGGCAGTGAGA | 6709 |
rs3793450 | snp | C/G | 0.00755907 | 0.0610114 | intron-variant | SPTAN1 | GRCh38.p7 | 9:128604651 | AGCCACCACGCCCAG[C/G]CTAAAAAAATTTATT | 6709 |
rs3814530 | snp | A/G | 0.139903 | 0.224452 | intron-variant | SPTAN1 | GRCh38.p7 | 9:128591710 | GCTTAGGCGTGTCCT[A/G]AGGCTCCTGGAGCCC | 6709 |
rs3814531 | snp | A/G | 0.0345262 | 0.126772 | intron-variant | SPTAN1 | GRCh38.p7 | 9:128600312 | GAGTGTCTGTCAAAT[A/G]CTCAGTACAGTTAGG | 6709 |
rs3818829 | snp | A/G | 0.00119737 | 0.0244387 | intron-variant | SPTAN1 | GRCh38.p7 | 9:128608795 | TCACCCAAAATAACT[A/G]TCCTTTTCTCAAGAC | 6709 |
rs4240431 | snp | A/G | 0.0520825 | 0.152737 | intron-variant | SPTAN1 | GRCh38.p7 | 9:128584200 | TCCTCTCAGGAATGG[A/G]AAAAAGACCTTATCA | 6709 |
rs4307429 | snp | A/G | 0.0176395 | 0.0922421 | SPTAN1 | 9 | allele_origin=G(germline)/A(germline) | 9:128588767 | TAGATGACTCAGCGC[A/G]GACGTGTTTTTACCA | 6709 |
rs4384085 | snp | A/G | 0.00358779 | 0.0422022 | intron-variant | SPTAN1 | GRCh38.p7 | 9:128582299 | TGATATCTGACTGGT[A/G]ACATCAAGCAAAATC | 6709 |
rs4395990 | snp | C/G | 0.45762 | 0.139261 | intron-variant | SPTAN1 | GRCh38.p7 | 9:128568240 | GCTTTAGGTACAATC[C/G]CTGCCTGGCAGGCCC | 6709 |
rs4506330 | snp | A/T | 0.458775 | 0.137524 | intron-variant | SPTAN1 | GRCh38.p7 | 9:128562132 | TTGTTTTTTATATTT[A/T]TTATTTTTTTGACAG | 6709 |
rs4560891 | snp | C/T | 0.0569829 | 0.158885 | intron-variant | SPTAN1 | GRCh38.p7 | 9:128563321 | CTCAGGAGGCTGAGG[C/T]GGGAGGATCGCTGGA | 6709 |
rs4836615 | snp | A/G | 0.0178853 | 0.0928588 | SPTAN1 | 9 | allele_origin=G(germline)/A(germline) | 9:128584886 | TTGGTGCTGCTCCTC[A/G]TGTCTCCCCTTCTTG | 6709 |
rs4837277 | snp | G/T | 0.104859 | 0.203554 | intron-variant | SPTAN1 | GRCh38.p7 | 9:128561587 | agaatggcatgaacc[G/T]gggaggcggagcttg | 6709 |
rs4837278 | snp | A/G | 0.0283406 | 0.115616 | intron-variant | SPTAN1 | GRCh38.p7 | 9:128561620 | gtgagccgaaattgc[A/G]ccactgcactccagc | 6709 |
rs4837279 | snp | A/G | 0.458315 | 0.13822 | intron-variant | SPTAN1 | GRCh38.p7 | 9:128567804 | TTGCTCTTATTGCCC[A/G]AGTTGGAGTGCAATG | 6709 |
rs4837280 | snp | A/G | 0.0584853 | 0.160693 | intron-variant | SPTAN1 | GRCh38.p7 | 9:128578027 | TAGACATTTGAGAAC[A/G]TAGAATTCAGAGCTT | 6709 |
rs4837281 | snp | C/T | 0.0581099 | 0.160244 | intron-variant | SPTAN1 | GRCh38.p7 | 9:128578566 | ccaggcacggtggct[C/T]atgtctgtaatccca | 6709 |
rs4837282 | snp | C/T | 0.0581099 | 0.160244 | intron-variant | SPTAN1 | GRCh38.p7 | 9:128578596 | agcactttggaaggc[C/T]gaggcgggtggatca | 6709 |
rs4837283 | snp | A/G | 0.0905309 | 0.192535 | intron-variant | SPTAN1 | GRCh38.p7 | 9:128578679 | actaaaaatgcaaca[A/G]ttagctggtcatggt | 6709 |
rs4837284 | snp | C/T | 0.328505 | 0.237354 | SPTAN1 | 9 | allele_origin=T(germline)/C(germline) | 9:128584890 | TGCTGCTCCTCGTGT[C/T]TCCCCTTCTTGCCGA | 6709 |
rs4837285 | snp | A/G | 0.0955749 | 0.196603 | intron-variant | SPTAN1 | GRCh38.p7 | 9:128587166 | tcacgactccctaca[A/G]ctttgacctcctgtg | 6709 |
rs4837286 | snp | A/G | 0.201418 | 0.245234 | intron-variant | SPTAN1 | GRCh38.p7 | 9:128587833 | ATTTACAGAGTTTAA[A/G]ATAAGatttatttat | 6709 |
rs4837287 | snp | A/C | 0.0955749 | 0.196603 | intron-variant | SPTAN1 | GRCh38.p7 | 9:128587926 | cctcggctcactgca[A/C]cctccgcctcctggg | 6709 |
rs4837288 | snp | G/T | 0.00358779 | 0.0422022 | intron-variant | SPTAN1 | GRCh38.p7 | 9:128601973 | AACTTGGTCATTGAT[G/T]ATATGAATGGGCAAC | 6709 |
rs4837289 | snp | A/G | 0.473909 | 0.111197 | intron-variant | SPTAN1 | GRCh38.p7 | 9:128603791 | CCTGGTCAAGAGCCT[A/G]CCAGTTCTCAACAGT | 6709 |
rs4837290 | snp | C/T | 0.0614824 | 0.164198 | intron-variant | SPTAN1 | GRCh38.p7 | 9:128618715 | GTCTCGATCTCCTGA[C/T]CTCGTGATCTGCCCG | 6709 |
rs5900805 | in-del | -/T | | | intron-variant | SPTAN1 | GRCh38.p7 | 9:128556479 | TGTTTTGAGTCATAG[-/T]AACAATAAGGAACTT | 6709 |
rs5900806 | in-del | -/TAAA | | | intron-variant | SPTAN1 | GRCh38.p7 | 9:128564588 | CAAAAACAAATAAAT[-/TAAA]AAATAAATAAAAATC | 6709 |
rs5900808 | in-del | -/A | 0.0923359 | 0.194016 | intron-variant | SPTAN1 | GRCh38.p7 | 9:128582329 | CTCAAAAGTTATGAG[-/A]AAAAATGTCATCACC | 6709 |
rs5900810 | in-del | -/TTG/TTT | 0 | 0 | intron-variant | SPTAN1 | GRCh38.p7 | 9:128588328 | TTTTTTTTTTTTTTT[-/TTG/TTT]GAGATGGAGTTTCAC | 6709 |
rs5900811 | in-del | -/A | | | intron-variant | SPTAN1 | GRCh38.p7 | 9:128599686 | ACAAAGCACAGCTCT[-/A]AAAAAAAAAAAAAAA | 6709 |
rs6478836 | snp | C/T | 0.444444 | 0.157135 | intron-variant | SPTAN1 | GRCh38.p7 | 9:128555623 | AATTTGCAAAGCCTT[C/T]TTTTTTTTTTTTTTT | 6709 |
rs6478837 | snp | C/T | 0.444444 | 0.157135 | intron-variant | SPTAN1 | GRCh38.p7 | 9:128555624 | ATTTGCAAAGCCTTT[C/T]TTTTTTTTTTTTTTT | 6709 |
rs6478838 | snp | A/G | 0.0452528 | 0.143452 | intron-variant | SPTAN1 | GRCh38.p7 | 9:128555792 | TCCTAGATATTTGGA[A/G]AAAATAATCTGAAAA | 6709 |
rs6478841 | snp | C/G | 0.199873 | 0.244923 | intron-variant | SPTAN1 | GRCh38.p7 | 9:128603297 | GAATTGTGGTTTTTA[C/G]CATTCTTTTTTCACT | 6709 |
rs6478842 | snp | C/T | 0.0581099 | 0.160244 | intron-variant | SPTAN1 | GRCh38.p7 | 9:128607118 | AAACTGGATCAAATG[C/T]ATGCCCAGGCCTAGG | 6709 |
rs7019666 | snp | C/G | 0.0581099 | 0.160244 | intron-variant | SPTAN1 | GRCh38.p7 | 9:128580393 | GTTTTGAAGTATCTT[C/G]GAGTATAAAATTGCC | 6709 |
rs7021150 | snp | A/T | 0 | 0 | utr-variant-3-prime, downstream-variant-500B | SPTAN1, WDR34 | GRCh38.p7 | 9:128633419 | GTGCTCTCACTTTCC[A/T]CTGTAACCTTAAGCC | 6709 |
rs7023384 | snp | A/G | 0.0287284 | 0.116357 | intron-variant | SPTAN1 | GRCh38.p7 | 9:128563957 | CAACCAACATTTCTT[A/G]ATGACCTCTGTATGC | 6709 |
rs7024498 | snp | C/G | 0.0175809 | 0.0920943 | SPTAN1 | 9 | allele_origin=G(germline)/C(germline) | 9:128611886 | CAGGGAGGAAGATGA[C/G]CACCGTCACTGTCAA | 6709 |
rs7026966 | snp | A/G | 0.0581099 | 0.160244 | intron-variant | SPTAN1 | GRCh38.p7 | 9:128587434 | TTGTCCCAAAAGATG[A/G]GAATCCTGAAAAACT | 6709 |
rs7027388 | snp | A/G | 0.0962929 | 0.197165 | intron-variant | SPTAN1 | GRCh38.p7 | 9:128587494 | GCAGGAGGTGATTAC[A/G]TCATTGTGCAACTGA | 6709 |
rs7027510 | snp | C/T | 0.367297 | 0.220775 | intron-variant | SPTAN1 | GRCh38.p7 | 9:128578672 | catctctactaaaaa[C/T]gcaacagttagctgg | 6709 |
rs7028880 | snp | A/G | 0.0298908 | 0.118541 | intron-variant | SPTAN1 | GRCh38.p7 | 9:128605718 | CAAAAACggccaggc[A/G]cagtggctcacgtct | 6709 |
rs7031524 | snp | C/T | 0.0581099 | 0.160244 | intron-variant | SPTAN1 | GRCh38.p7 | 9:128579363 | gacaGAGCCCTGGAA[C/T]GAAAGAGAGCTCAGA | 6709 |
rs7032787 | snp | C/T | | | intron-variant | SPTAN1 | GRCh38.p7 | 9:128616990 | cgcctataatcccaa[C/T]actttgggagaccga | 6709 |
rs7032911 | snp | A/G | 0.0905309 | 0.192535 | intron-variant | SPTAN1 | GRCh38.p7 | 9:128576321 | ACTCAGGCTGACAAG[A/G]CAGGATCACTTGAGA | 6709 |