DNA & RNA Element - UTRdb Gene Name Type ASPicDB UTRaspic Refseq ID Genome RNF148 3'UTR 33981da309 BA091438 NM_198085 chr7:122128960-122129209:- RNF148 5'UTR 33981da309 CA143619 NM_198085 chr7:122129552-122130202:-

DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0004499 hsa-miR-26a-1* 378925 RNF148 gcACGUUCAUUGGUUCUUAUCc | ||| | || |||| ||| uuUCCAAAU-ACAAAGAUUAGa 2 21 245 265 [hg19:7:122341830-122341850:-] 0.5633 130 0 -5.96 -0.1064 MIMAT0004499 hsa-miR-26a-1* 378925 RNF148 gcACGUUCAUUGGUUCUUAUCc | ||| | || |||| ||| uuUCCAAAU-ACAAAGAUUAGa 2 21 37 57 [hg19:7:122341830-122341850:-] 0.5633 130 0 -5.96 -0.1085 MIMAT0000088 hsa-miR-30a* 378925 RNF148 cgACGUUUGUA--GGCUGACUUUc |||||:::| | |||||| ugUGCAAGUGUGACAUCCUGAAAa 2 21 180 203 [hg19:7:122341892-122341915:-] 0.7415 127 6 -13.27 -0.2373 MIMAT0004506 hsa-miR-33a* 378925 RNF148 cacuacgUGACACCUUUGUAAc ||| || ||||||| cauuuuaACU-UGCAAACAUUu 2 16 106 126 [hg19:7:122341969-122341989:-] 0.7174 153 7 -7.34 -0.9646 MIMAT0000102 hsa-miR-105 378925 RNF148 ugGUGUCCU-CA-GACUCGUAAAcu | || || || | |||||| acCCCAAGAUGUAGUACGCAUUUua 3 22 88 112 [hg19:7:122341983-122342007:-] 0.7136 127 0 -9.69 -0.1328 MIMAT0004516 hsa-miR-105* 378925 RNF148 aucGUGUACG---AGUUUGUAGGca ||::||| | :|||||| uccCAUGUGCAAGUGUGACAUCCug 3 20 175 199 [hg19:7:122341896-122341920:-] 0.7415 130 0 -14.88 -0.1030 MIMAT0000228 hsa-miR-198 378925 RNF148 cuuggauagaggggAGACCUgg |||||| gaaaacuuaagaaaUCUGGAga 3 9 199 220 [hg19:7:122341875-122341896:-] 0.6551 120 0 -12.12 -0.3279 MIMAT0004550 hsa-miR-30c-2* 378925 RNF148 ucUCAUUU---GUCGGA-AGA-GGGUc || ||| ||||:| ||| |||| agAGAAAAUUUCAGCUUCUCUACCCAa 2 21 293 319 [hg19:7:122341776-122341802:-] 0.5525 126 0 -19.46 -0.8720 MIMAT0004550 hsa-miR-30c-2* 378925 RNF148 ucUCAUUU---GUCGGA-AGA-GGGUc || ||| ||||:| ||| |||| agAGAAAAUUUCAGCUUCUCUACCCAa 2 21 85 111 [hg19:7:122341776-122341802:-] 0.5525 126 0 -19.46 -0.9428 MIMAT0004551 hsa-miR-30d* 378925 RNF148 cguCGUUUGUA--GACUGACUUUc ||||:::| | |||||| uguGCAAGUGUGACAUCCUGAAAa 2 20 180 203 [hg19:7:122341892-122341915:-] 0.7415 122 6 -11.93 -0.2373 MIMAT0009197 hsa-miR-205* 378925 RNF148 cuugaAGUGAGGUGACUUUag | || :| |||||| aagugUGACAUC-CUGAAAac 3 17 185 204 [hg19:7:122341891-122341910:-] 0.7415 126 0 -8.32 -0.1589 MIMAT0004570 hsa-miR-223* 378925 RNF148 uugagUCGAACAGUUUAUGUgc | ||| |||||||| accagAUCUUUCCAAAUACAaa 3 18 237 258 [hg19:7:122341837-122341858:-] 0.5660 141 0 -13.20 -0.1039 MIMAT0004570 hsa-miR-223* 378925 RNF148 uugagUCGAACAGUUUAUGUgc | ||| |||||||| accagAUCUUUCCAAAUACAaa 3 18 29 50 [hg19:7:122341837-122341858:-] 0.5660 141 0 -13.20 -0.1194 MIMAT0000433 hsa-miR-142-5p 378925 RNF148 ucAUCACGA-AAGAUGAAAUAc | || :| || |||||||| aaUUGUCUUAUUGUACUUUAUg 2 20 268 289 [hg19:7:122341806-122341827:-] 0.5633 158 7 -11.35 -0.9770 MIMAT0000433 hsa-miR-142-5p 378925 RNF148 ucAUCACGA-AAGAUGAAAUAc | || :| || |||||||| aaUUGUCUUAUUGUACUUUAUg 2 20 60 81 [hg19:7:122341806-122341827:-] 0.5633 158 7 -11.35 -1.0134 MIMAT0004604 hsa-miR-127-5p 378925 RNF148 uagucucgggagacUCGAAGUc ||||||| ------------ccAGCUUCAa 2 9 1 10 [hg19:7:122342085-122342094:-] 0.6524 140 7 -11.13 -0.4636 MIMAT0004658 hsa-miR-155* 378925 RNF148 acAAUUACGAU--UAUACAUC-CUc ||| || || ||||||| || ucUUAUUG-UACUUUAUGUAGAGAg 2 21 273 296 [hg19:7:122341799-122341822:-] 0.5579 121 0 -14.24 -1.1286 MIMAT0004658 hsa-miR-155* 378925 RNF148 acAAUUACGAU--UAUACAUC-CUc ||| || || ||||||| || ucUUAUUG-UACUUUAUGUAGAGAg 2 21 65 88 [hg19:7:122341799-122341822:-] 0.5579 121 0 -14.24 -1.1569 MIMAT0004674 hsa-miR-30c-1* 378925 RNF148 ccUCAUUU---GUUG-GGAGA-GGGUc || ||| ||:| :|||| |||| agAGAAAAUUUCAGCUUCUCUACCCAa 2 21 293 319 [hg19:7:122341776-122341802:-] 0.5525 122 0 -18.99 -0.8720 MIMAT0004674 hsa-miR-30c-1* 378925 RNF148 ccUCAUUU---GUUG-GGAGA-GGGUc || ||| ||:| :|||| |||| agAGAAAAUUUCAGCUUCUCUACCCAa 2 21 85 111 [hg19:7:122341776-122341802:-] 0.5525 122 0 -18.99 -0.9428 MIMAT0000693 hsa-miR-30e* 378925 RNF148 cgacauuuguaggcuGACUUUc |||||| ugcaagugugacaucCUGAAAa 2 8 182 203 [hg19:7:122341892-122341913:-] 0.7415 120 6 -12.94 -0.2373 MIMAT0004681 hsa-miR-26a-2* 378925 RNF148 cuuuGUUCAUUAGUUCUUAUCc ||| | | |||| ||| uuucCAAAU-ACAAAGAUUAGa 2 19 245 265 [hg19:7:122341830-122341850:-] 0.5633 120 0 -4.48 -0.1064 MIMAT0004681 hsa-miR-26a-2* 378925 RNF148 cuuuGUUCAUUAGUUCUUAUCc ||| | | |||| ||| uuucCAAAU-ACAAAGAUUAGa 2 19 37 57 [hg19:7:122341830-122341850:-] 0.5633 120 0 -4.48 -0.1085 MIMAT0000751 hsa-miR-330-3p 378925 RNF148 agaGACGUCCGGCACACGAAACg |||: |::|| ||||||| caaCUGU--GUUGUUUGCUUUGa 2 21 58 78 [hg19:7:122342017-122342037:-] 0.6810 157 7 -19.16 -1.1591 MIMAT0004701 hsa-miR-338-5p 378925 RNF148 gugagucgugguccuAUAACAa |||||| uuagauaaauugucuUAUUGUa 2 8 261 282 [hg19:7:122341813-122341834:-] 0.5633 120 6 -4.99 -0.1273 MIMAT0004701 hsa-miR-338-5p 378925 RNF148 gugagucgugguccuAUAACAa |||||| uuagauaaauugucuUAUUGUa 2 8 53 74 [hg19:7:122341813-122341834:-] 0.5633 120 6 -4.99 -0.1451 MIMAT0004703 hsa-miR-335* 378925 RNF148 ccaguccucguuauuACUUUUu |||||| gcaagugugacauccUGAAAAc 2 8 183 204 [hg19:7:122341891-122341912:-] 0.7415 120 6 -3.33 -0.2104 MIMAT0001638 hsa-miR-409-5p 378925 RNF148 uacguuucaacgagccCAUUGGa |||||| agaauuuucugaagauGUAACCa 2 8 218 240 [hg19:7:122341855-122341877:-] 0.5687 120 6 -7.84 -0.1176 MIMAT0002804 hsa-miR-488* 378925 RNF148 aacucucacgguaaUAGACCc |||||| ugaaaacuuaagaaAUCUGGa 2 8 198 218 [hg19:7:122341877-122341897:-] 0.6551 120 6 -7.80 -0.1811 MIMAT0002808 hsa-miR-511 378925 RNF148 acugacgucucguUUUCUGUg :|||||| auuagaccuaaauGAAGACAa 2 9 40 60 [hg19:7:122342035-122342055:-] 0.6524 124 6 -8.80 -0.1665 MIMAT0002810 hsa-miR-202* 378925 RNF148 guuucuucauauacGUAUCCUu ||||||| ccuggcuuuuagccCAUAGGAc 2 9 150 171 [hg19:7:122341924-122341945:-] 0.7415 140 7 -11.22 -0.4097 MIMAT0004767 hsa-miR-193b* 378925 RNF148 aguAGAGCGGGAGU-UUUGGGGc |:| | | :| ||||||| ugcUUUGACACAUACAAACCCCa 2 20 71 93 [hg19:7:122342002-122342024:-] 0.7136 146 7 -13.83 -1.1975 MIMAT0002826 hsa-miR-515-5p 378925 RNF148 gucuuucacgaaagaaaACCUCUu |||||| ugaaaacuuaagaaaucUGGAGAa 2 8 198 221 [hg19:7:122341874-122341897:-] 0.6551 120 6 -12.40 -0.3444 MIMAT0002828 hsa-miR-519e* 378925 RNF148 cuuucacgagggaaaACCUCUu |||||| aaaacuuaagaaaucUGGAGAa 2 8 200 221 [hg19:7:122341874-122341895:-] 0.6551 120 6 -10.38 -0.3444 MIMAT0002833 hsa-miR-520a-5p 378925 RNF148 ucuuucaugaagggAGACCUc |||||| gaaaacuuaagaaaUCUGGAg 2 8 199 219 [hg19:7:122341876-122341896:-] 0.6551 120 6 -15.66 -0.2153 MIMAT0002838 hsa-miR-525-5p 378925 RNF148 ucuuucacguagggAGACCUc |||||| gaaaacuuaagaaaUCUGGAg 2 8 199 219 [hg19:7:122341876-122341896:-] 0.6551 120 6 -13.39 -0.2153 MIMAT0002851 hsa-miR-517* 378925 RNF148 ucugucacgaaggUAGAUCUCc ||||:||| gaaaacuuaagaaAUCUGGAGa 2 10 199 220 [hg19:7:122341875-122341896:-] 0.6551 129 0 -12.46 -0.1101 MIMAT0004777 hsa-miR-513a-3p 378925 RNF148 ggaagagUCUUUCCACUUUAAAu | ||:|||||||||| aguaugaACAAGGGUGAAAUUUg 2 17 319 341 [hg19:7:122341754-122341776:-] 0.5424 168 7 -16.57 -0.7338 MIMAT0004777 hsa-miR-513a-3p 378925 RNF148 ggaagagUCUUUCCACUUUAAAu | ||:|||||||||| aguaugaACAAGGGUGAAAUUUg 2 17 111 133 [hg19:7:122341754-122341776:-] 0.5424 168 7 -16.57 -0.7831 MIMAT0002879 hsa-miR-507 378925 RNF148 aagugagguuuuccACGUUUu |||||| uacgcauuuuaacuUGCAAAc 2 8 102 122 [hg19:7:122341973-122341993:-] 0.7174 120 6 -10.29 -0.2004 MIMAT0004778 hsa-miR-508-5p 378925 RNF148 guacUCACUGCGGGAGACCUCau | | | | ||||||| gaaaACUUAAGAAAUCUGGAGaa 3 20 199 221 [hg19:7:122341874-122341896:-] 0.6551 127 0 -12.49 -0.2912 MIMAT0002881 hsa-miR-509-3p 378925 RNF148 gauGGGUGUCUGCA-UGGU-UAGu :|:: |||:|| |||| ||| uuuUCUGAAGAUGUAACCAGAUCu 2 20 222 245 [hg19:7:122341850-122341873:-] 0.5660 126 0 -16.51 -0.9631 MIMAT0002881 hsa-miR-509-3p 378925 RNF148 gauGGGUGUCUGCA-UGGU-UAGu :|:: |||:|| |||| ||| uuuUCUGAAGAUGUAACCAGAUCu 2 20 14 37 [hg19:7:122341850-122341873:-] 0.5660 126 0 -16.51 -0.6973 MIMAT0002888 hsa-miR-532-5p 378925 RNF148 ugccAGGAUGUGAGUUCCGUAc |::| : | :||||||| aacaUUUUUUCCAUAAGGCAUg 2 19 120 141 [hg19:7:122341954-122341975:-] 0.7174 150 7 -16.13 -1.0361 MIMAT0003221 hsa-miR-557 378925 RNF148 ucuguuccgggugggcACGUUUg |||||| aguacgcauuuuaacuUGCAAAc 2 8 100 122 [hg19:7:122341973-122341995:-] 0.7174 120 6 -11.60 -0.2079 MIMAT0003223 hsa-miR-559 378925 RNF148 aaaACCACGUAUAA-AUGAAAu | || | |||| |||||| aaaUUGU-CUUAUUGUACUUUa 2 19 267 287 [hg19:7:122341808-122341828:-] 0.5633 124 6 -7.56 -1.2164 MIMAT0003223 hsa-miR-559 378925 RNF148 aaaACCACGUAUAA-AUGAAAu | || | |||| |||||| aaaUUGU-CUUAUUGUACUUUa 2 19 59 79 [hg19:7:122341808-122341828:-] 0.5633 124 6 -7.56 -1.2336 MIMAT0003225 hsa-miR-561 378925 RNF148 ugaaguuccUAGAA--UUUGAAac ||| | |||||| aagugugacAUCCUGAAAACUUaa 3 14 185 208 [hg19:7:122341887-122341910:-] 0.6551 124 0 -2.86 -0.1134 MIMAT0003231 hsa-miR-567 378925 RNF148 caagacaggaccuucuUGUAUGa |||||| uguuguuugcuuugacACAUACa 2 8 64 86 [hg19:7:122342009-122342031:-] 0.7097 120 6 -11.37 -0.2247 MIMAT0003235 hsa-miR-570 378925 RNF148 cgUUUCCA--UUAACGACAAAAgc ||:||| |||| |||||| acAAGGGUGAAAUUUGUGUUUUaa 3 21 326 349 [hg19:7:122341746-122341769:-] 0.5324 147 0 -17.12 -0.1325 MIMAT0003235 hsa-miR-570 378925 RNF148 cgUUUCCA--UUAACGACAAAAgc ||:||| |||| |||||| acAAGGGUGAAAUUUGUGUUUUaa 3 21 118 141 [hg19:7:122341746-122341769:-] 0.5324 147 0 -17.12 -0.1346 MIMAT0003241 hsa-miR-576-5p 378925 RNF148 uuucugcaccUCUUUAAUCUua | |:|||||| uuccaaauacAAAGAUUAGAua 3 13 246 267 [hg19:7:122341828-122341849:-] 0.5633 128 0 -5.60 -0.1962 MIMAT0003241 hsa-miR-576-5p 378925 RNF148 uuucugcaccUCUUUAAUCUua | |:|||||| uuccaaauacAAAGAUUAGAua 3 13 38 59 [hg19:7:122341828-122341849:-] 0.5633 128 0 -5.60 -0.1914 MIMAT0004798 hsa-miR-548b-5p 378925 RNF148 ccgguuuugguguuaAUGAAAa |||||| uaaauugucuuauugUACUUUa 2 8 266 287 [hg19:7:122341808-122341829:-] 0.5633 120 6 -4.84 -0.2548 MIMAT0004798 hsa-miR-548b-5p 378925 RNF148 ccgguuuugguguuaAUGAAAa |||||| uaaauugucuuauugUACUUUa 2 8 58 79 [hg19:7:122341808-122341829:-] 0.5633 120 6 -4.84 -0.2838 MIMAT0003260 hsa-miR-592 378925 RNF148 uguaGUAGCGUAU--AACUGUGUu ::|:|: |: |||||||| acugUGUUGUUUGCUUUGACACAu 2 19 60 83 [hg19:7:122342012-122342035:-] 0.7097 149 7 -13.56 -1.1291 MIMAT0003265 hsa-miR-597 378925 RNF148 ugucaccaguagcucACUGUGu |||||| cuguguuguuugcuuUGACACa 2 8 61 82 [hg19:7:122342013-122342034:-] 0.7097 120 6 -13.21 -0.2098 MIMAT0004803 hsa-miR-548a-5p 378925 RNF148 ccAUUUUG-AGCGUUA-AUGAAAa |||| : || :| | |||||| gaUAAAUUGUCUUAUUGUACUUUa 2 21 264 287 [hg19:7:122341808-122341831:-] 0.5633 123 6 -4.63 -1.2164 MIMAT0004803 hsa-miR-548a-5p 378925 RNF148 ccAUUUUG-AGCGUUA-AUGAAAa |||| : || :| | |||||| gaUAAAUUGUCUUAUUGUACUUUa 2 21 56 79 [hg19:7:122341808-122341831:-] 0.5633 123 6 -4.63 -1.2336 MIMAT0003269 hsa-miR-601 378925 RNF148 gaggagguuguuagGAUCUGGu :|||||| aaggggaugaggaaUUAGACCu 2 9 27 48 [hg19:7:122342047-122342068:-] 0.6524 124 6 -9.99 -0.1399 MIMAT0003280 hsa-miR-612 378925 RNF148 uuccUCGAGUCUUCGGGACGGGUCg | ||| | :| ||||||| auaaAACUCCUUA-UCAUGCCCAGc 2 22 144 167 [hg19:7:122341720-122341743:-] 0.5324 147 7 -20.93 -1.1913 MIMAT0004806 hsa-miR-548c-5p 378925 RNF148 ccguuuuuggcguuaAUGAAAa |||||| uaaauugucuuauugUACUUUa 2 8 266 287 [hg19:7:122341808-122341829:-] 0.5633 120 6 -6.41 -0.2548 MIMAT0004806 hsa-miR-548c-5p 378925 RNF148 ccguuuuuggcguuaAUGAAAa |||||| uaaauugucuuauugUACUUUa 2 8 58 79 [hg19:7:122341808-122341829:-] 0.5633 120 6 -6.41 -0.2838 MIMAT0003285 hsa-miR-548c-3p 378925 RNF148 cguuuucauuaacucUAAAAAc |||||| uuuuaacuugcaaacAUUUUUu 2 8 108 129 [hg19:7:122341966-122341987:-] 0.7174 120 6 -1.46 -0.1103 MIMAT0003292 hsa-miR-623 378925 RNF148 ugGGUUGUCGGGGACGUUCCCua || | ||: : |||||| uaCCCA-AGUAUGAACAAGGGug 3 22 105 126 [hg19:7:122341761-122341782:-] 0.5424 123 0 -20.03 -0.1028 MIMAT0004810 hsa-miR-629 378925 RNF148 ucaagaggguugcaUUUGGGu |||||| gcuuugacacauacAAACCCc 2 8 72 92 [hg19:7:122342003-122342023:-] 0.7136 120 6 -8.98 -0.1933 MIMAT0003298 hsa-miR-629* 378925 RNF148 cgacccgaaugcaacCCUCUUg |||||| aaacuuaagaaaucuGGAGAAu 2 8 201 222 [hg19:7:122341873-122341894:-] 0.6551 120 6 -11.03 -0.1154 MIMAT0003305 hsa-miR-635 378925 RNF148 ccuguaacaaagucacGGGUUCa |||||| uuugacacauacaaacCCCAAGa 2 8 74 96 [hg19:7:122341999-122342021:-] 0.7136 120 6 -12.62 -0.3107 MIMAT0003311 hsa-miR-641 378925 RNF148 cuccacugagauaggauACAGAAa |||||| acaaagauuagauaaauUGUCUUa 2 8 254 277 [hg19:7:122341818-122341841:-] 0.5633 120 6 -11.04 -0.3527 MIMAT0003311 hsa-miR-641 378925 RNF148 cuccacugagauaggauACAGAAa |||||| acaaagauuagauaaauUGUCUUa 2 8 46 69 [hg19:7:122341818-122341841:-] 0.5633 120 6 -11.04 -0.3870 MIMAT0003313 hsa-miR-643 378925 RNF148 gaUGGACUCGAUCG---UAUGUUca ||| || || | |||||| uaACCAGAUCUUUCCAAAUACAAag 3 21 235 259 [hg19:7:122341836-122341860:-] 0.5660 131 0 -9.82 -0.1327 MIMAT0003313 hsa-miR-643 378925 RNF148 gaUGGACUCGAUCG---UAUGUUca ||| || || | |||||| uaACCAGAUCUUUCCAAAUACAAag 3 21 27 51 [hg19:7:122341836-122341860:-] 0.5660 131 0 -9.82 -0.1376 MIMAT0004812 hsa-miR-548d-5p 378925 RNF148 ccguuuuugguguuaAUGAAAa |||||| uaaauugucuuauugUACUUUa 2 8 266 287 [hg19:7:122341808-122341829:-] 0.5633 120 6 -4.33 -0.2548 MIMAT0004812 hsa-miR-548d-5p 378925 RNF148 ccguuuuugguguuaAUGAAAa |||||| uaaauugucuuauugUACUUUa 2 8 58 79 [hg19:7:122341808-122341829:-] 0.5633 120 6 -4.33 -0.2838 MIMAT0003335 hsa-miR-657 378925 RNF148 ggAUCUCUCCCACUCUUGGACGg ||| | | |||:||| ugUAGUACGCAUUUUAACUUGCa 2 22 97 119 [hg19:7:122341976-122341998:-] 0.7174 125 0 -9.77 -0.1346 MIMAT0003888 hsa-miR-766 378925 RNF148 cgacuccgacaccccGACCUCa |||||| gaaaacuuaagaaauCUGGAGa 2 8 199 220 [hg19:7:122341875-122341896:-] 0.6551 120 6 -10.50 -0.3696 MIMAT0006790 hsa-miR-675* 378925 RNF148 acucgccacucccGUAUGUc |||||| guuugcuuugacaCAUACAa 2 8 68 87 [hg19:7:122342008-122342027:-] 0.7097 120 6 -7.57 -0.1171 MIMAT0004909 hsa-miR-450b-5p 378925 RNF148 auaaguccuuguauAACGUUUu ||||||| guacgcauuuuaacUUGCAAAc 2 9 101 122 [hg19:7:122341973-122341994:-] 0.7174 140 7 -4.91 -1.0450 MIMAT0004912 hsa-miR-890 378925 RNF148 guugacuacggaaaGGUUCAu |||||| uucagcuucucuacCCAAGUa 2 8 94 114 [hg19:7:122341773-122341793:-] 0.5525 120 6 -16.84 -0.1157 MIMAT0004923 hsa-miR-875-3p 378925 RNF148 guGUUGGAGUCACAAAGGUcc :|||| | | |||||| ugUAACCAGA-UCUUUCCAaa 3 20 233 252 [hg19:7:122341843-122341862:-] 0.5660 133 0 -9.78 -0.1564 MIMAT0004923 hsa-miR-875-3p 378925 RNF148 guguuggaGUCACAAAGGUcc || | |||||| cuugcaaaCAUUUUUUCCAua 3 14 114 134 [hg19:7:122341961-122341981:-] 0.7174 129 0 -6.37 -0.1646 MIMAT0004923 hsa-miR-875-3p 378925 RNF148 guGUUGGAGUCACAAAGGUcc :|||| | | |||||| ugUAACCAGA-UCUUUCCAaa 3 20 25 44 [hg19:7:122341843-122341862:-] 0.5660 133 0 -9.78 -0.1997 MIMAT0004985 hsa-miR-942 378925 RNF148 guguaccgguuuUGUCUCUUcu | |||||| uguacuuuauguAGAGAGAAaa 3 11 279 300 [hg19:7:122341795-122341816:-] 0.5579 122 0 -8.86 -0.1253 MIMAT0004985 hsa-miR-942 378925 RNF148 guguaccgguuuUGUCUCUUcu | |||||| uguacuuuauguAGAGAGAAaa 3 11 71 92 [hg19:7:122341795-122341816:-] 0.5579 122 0 -8.86 -0.1417 MIMAT0004450 hsa-miR-297 378925 RNF148 guACGUGUACGUGUGUAUGUa | ::| | ||||||||| ugUUUGCUUUGACACAUACAa 2 20 67 87 [hg19:7:122342008-122342028:-] 0.7097 155 7 -15.40 -1.1138 MIMAT0005875 hsa-miR-548j 378925 RNF148 ugguuucuggcguuaAUGAAAa |||||| uaaauugucuuauugUACUUUa 2 8 266 287 [hg19:7:122341808-122341829:-] 0.5633 120 6 -4.41 -0.2503 MIMAT0005875 hsa-miR-548j 378925 RNF148 ugguuucuggcguuaAUGAAAa |||||| uaaauugucuuauugUACUUUa 2 8 58 79 [hg19:7:122341808-122341829:-] 0.5633 120 6 -4.41 -0.2790 MIMAT0005876 hsa-miR-1285 378925 RNF148 uccaGAGUGAAACAACGGGUCu ||| :| | ||||||| aaaaCUCCUUAUCAUGCCCAGc 2 19 146 167 [hg19:7:122341720-122341741:-] 0.5324 154 7 -18.97 -1.1879 MIMAT0005882 hsa-miR-548k 378925 RNF148 ucGUUUUA-GGCGU-UCAUGAAAa :||| | :| :| ||||||| gaUAAAUUGUCUUAUUGUACUUUa 2 21 264 287 [hg19:7:122341808-122341831:-] 0.5633 146 7 -8.22 -1.2809 MIMAT0005882 hsa-miR-548k 378925 RNF148 ucGUUUUA-GGCGU-UCAUGAAAa :||| | :| :| ||||||| gaUAAAUUGUCUUAUUGUACUUUa 2 21 56 79 [hg19:7:122341808-122341831:-] 0.5633 146 7 -8.22 -1.2913 MIMAT0005889 hsa-miR-548l 378925 RNF148 cuGUUUUG-GGCGU-UUAUGAAAa :||| : :| :| :|||||| gaUAAAUUGUCUUAUUGUACUUUa 2 21 264 287 [hg19:7:122341808-122341831:-] 0.5633 126 6 -8.62 -0.2548 MIMAT0005889 hsa-miR-548l 378925 RNF148 cuGUUUUG-GGCGU-UUAUGAAAa :||| : :| :| :|||||| gaUAAAUUGUCUUAUUGUACUUUa 2 21 56 79 [hg19:7:122341808-122341831:-] 0.5633 126 6 -8.62 -0.2838 MIMAT0005890 hsa-miR-1302 378925 RNF148 aaAUC--GUAUUC-AUACAGGGUu ||| ||||:| |||||||| uuUAGCCCAUAGGACAUGUCCCAu 2 20 157 180 [hg19:7:122341915-122341938:-] 0.7415 161 7 -20.91 -0.9159 MIMAT0005900 hsa-miR-1248 378925 RNF148 aaauCGUGUCACGAAUAUGUUCUUCCa ||: ||| || | ||||||| aacuGCG-AGUUCUCA---AAGAAGGg 2 24 9 31 [hg19:7:122342064-122342086:-] 0.6524 149 7 -14.31 -0.3399 MIMAT0005918 hsa-miR-1265 378925 RNF148 uuguUGUGAACUGGUGUAGGAc :|| || : ||||||| auguGCAAGUG-UGACAUCCUg 2 19 179 199 [hg19:7:122341896-122341916:-] 0.7415 144 7 -17.26 -0.8743 MIMAT0005928 hsa-miR-548h 378925 RNF148 cuguuuuuggcgcuaAUGAAAa |||||| uaaauugucuuauugUACUUUa 2 8 266 287 [hg19:7:122341808-122341829:-] 0.5633 120 6 -6.38 -0.2548 MIMAT0005928 hsa-miR-548h 378925 RNF148 cuguuuuuggcgcuaAUGAAAa |||||| uaaauugucuuauugUACUUUa 2 8 58 79 [hg19:7:122341808-122341829:-] 0.5633 120 6 -6.38 -0.2838 MIMAT0005935 hsa-miR-548i 378925 RNF148 ccguuuuaggcguuaAUGAAAa |||||| uaaauugucuuauugUACUUUa 2 8 266 287 [hg19:7:122341808-122341829:-] 0.5633 120 6 -5.15 -0.2503 MIMAT0005935 hsa-miR-548i 378925 RNF148 ccguuuuaggcguuaAUGAAAa |||||| uaaauugucuuauugUACUUUa 2 8 58 79 [hg19:7:122341808-122341829:-] 0.5633 120 6 -5.15 -0.2790 MIMAT0005940 hsa-miR-1282 378925 RNF148 uucgucuUUUUCCGUUUGcu || |||||| gcauuuuAACUUGCAAACau 3 14 105 124 [hg19:7:122341971-122341990:-] 0.7174 121 0 -4.97 -0.2487 MIMAT0005949 hsa-miR-664 378925 RNF148 acaUCC--GACCCCUAUUUACUUau ||| :| | |||||||| augAGGAAUUAGACCUAAAUGAAga 3 21 33 57 [hg19:7:122342038-122342062:-] 0.6524 131 0 -9.82 -0.1081 MIMAT0011162 hsa-miR-2117 378925 RNF148 gaCAGGAA--CCGUUUCUCUUgu || ||| |:|:|||||| uuGUACUUUAUGUAGAGAGAAaa 3 20 278 300 [hg19:7:122341795-122341817:-] 0.5579 138 0 -16.56 -0.1217 MIMAT0011162 hsa-miR-2117 378925 RNF148 gaCAGGAA--CCGUUUCUCUUgu || ||| |:|:|||||| uuGUACUUUAUGUAGAGAGAAaa 3 20 70 92 [hg19:7:122341795-122341817:-] 0.5579 138 0 -16.56 -0.1376 MIMAT0011775 hsa-miR-2276 378925 RNF148 ggaGCGGAGACUGUGAACGUcu ||| |:| | ||||||| guaCGCAUUUUA-ACUUGCAaa 3 20 101 121 [hg19:7:122341974-122341994:-] 0.7174 141 0 -14.44 -0.2313 MIMAT0014997 hsa-miR-3132 378925 RNF148 aggAGACUCGAGGAAGAGAUGGGu |:| || ||||||||||| aaaUUUCAG---CUUCUCUACCCa 2 22 298 318 [hg19:7:122341777-122341797:-] 0.5525 161 7 -23.61 -0.7639 MIMAT0014997 hsa-miR-3132 378925 RNF148 aggAGACUCGAGGAAGAGAUGGGu |:| || ||||||||||| aaaUUUCAG---CUUCUCUACCCa 2 22 90 110 [hg19:7:122341777-122341797:-] 0.5525 161 7 -23.61 -0.8238 MIMAT0015013 hsa-miR-548u 378925 RNF148 gcgUUUUCAUUAACGUC-AGAAAc |:| |||| ||| ||||| ugaAGAUGUAA--CCAGAUCUUUc 2 21 227 248 [hg19:7:122341847-122341868:-] 0.5660 121 0 -9.00 -1.0784 MIMAT0015013 hsa-miR-548u 378925 RNF148 gcgUUUUCAUUAACGUC-AGAAAc |:| |||| ||| ||||| ugaAGAUGUAA--CCAGAUCUUUc 2 21 19 40 [hg19:7:122341847-122341868:-] 0.5660 121 0 -9.00 -1.1013 MIMAT0015019 hsa-miR-3147 378925 RNF148 agUGUG-GGAGGAGUGACGGGUUGg | || |||: ||| ||||||:| uaAAACUCCUUAUCA-UGCCCAGC- 2 23 145 167 [hg19:7:122341720-122341742:-] 0.5324 151 0 -24.59 -0.1077 MIMAT0015021 hsa-miR-3148 378925 RNF148 uucGUGUGUGGUCAAAAAAGGu ::|| | || |||||||| acuUGCA-AACA-UUUUUUCCa 2 20 113 132 [hg19:7:122341963-122341982:-] 0.7174 151 7 -12.95 -1.2762 MIMAT0015022 hsa-miR-3149 378925 RNF148 uauguguguguauagGUAUGUUu ||||||| uuguuugcuuugacaCAUACAAa 2 9 66 88 [hg19:7:122342007-122342029:-] 0.7097 140 7 -10.87 -1.2046 MIMAT0015022 hsa-miR-3149 378925 RNF148 uauguguguguauaggUAUGUUu |||||| aaccagaucuuuccaaAUACAAa 2 8 236 258 [hg19:7:122341837-122341859:-] 0.5660 120 6 -11.79 -0.1138 MIMAT0015022 hsa-miR-3149 378925 RNF148 uauguguguguauaggUAUGUUu |||||| aaccagaucuuuccaaAUACAAa 2 8 28 50 [hg19:7:122341837-122341859:-] 0.5660 120 6 -11.79 -0.1306 MIMAT0015026 hsa-miR-3153 378925 RNF148 uuUACAGGGAUGAGCGAAAGGgg |||| | | : |||||| agAUGUAACCAGAU-CUUUCCaa 3 22 230 251 [hg19:7:122341844-122341865:-] 0.5660 127 0 -13.46 -0.2075 MIMAT0015026 hsa-miR-3153 378925 RNF148 uuUACAGGGAUGAGCGAAAGGgg |||| | | : |||||| agAUGUAACCAGAU-CUUUCCaa 3 22 22 43 [hg19:7:122341844-122341865:-] 0.5660 127 0 -13.46 -0.2418 MIMAT0015030 hsa-miR-3156 378925 RNF148 acagagggugaaGGUCUAGAAa ||||||||| cugaagauguaaCCAGAUCUUu 2 11 226 247 [hg19:7:122341848-122341869:-] 0.5660 150 7 -15.90 -0.7498 MIMAT0015030 hsa-miR-3156 378925 RNF148 acagagggugaaGGUCUAGAAa ||||||||| cugaagauguaaCCAGAUCUUu 2 11 18 39 [hg19:7:122341848-122341869:-] 0.5660 150 7 -15.90 -0.8163 MIMAT0015035 hsa-miR-3161 378925 RNF148 uagacccggagacAAGAAUAGUc | ||||||| uuaaaaauaaaacUCCUUAUCAu 2 11 346 368 [hg19:7:122341727-122341749:-] 0.5324 142 7 -8.19 -0.2742 MIMAT0015035 hsa-miR-3161 378925 RNF148 uagacccggagacAAGAAUAGUc | ||||||| uuaaaaauaaaacUCCUUAUCAu 2 11 138 160 [hg19:7:122341727-122341749:-] 0.5324 142 7 -8.19 -0.5604 MIMAT0015042 hsa-miR-3167 378925 RNF148 uguggucaUAAAGACUUUAGGa | || ||||||: uccugaaaACUUAAGAAAUCUg 2 15 195 216 [hg19:7:122341879-122341900:-] 0.6551 130 0 -7.22 -0.1022 MIMAT0015045 hsa-miR-3170 378925 RNF148 ugAC-AGACAGAGU---CUUGGGGUc || |:|| | || ||||||| uuUGCUUUGACACAUACAAACCCCAa 2 21 69 94 [hg19:7:122342001-122342026:-] 0.7136 146 7 -13.82 -1.2722 MIMAT0015047 hsa-miR-3172 378925 RNF148 auuccugacguUUUGGGGu ||||||| uugacacauacAAACCCCa 2 9 75 93 [hg19:7:122342002-122342020:-] 0.7136 140 7 -14.32 -1.1959 MIMAT0015048 hsa-miR-3173 378925 RNF148 accggacggauaaagGAGGAAa |||||| guuuuaaaaauaaaaCUCCUUa 2 8 343 364 [hg19:7:122341731-122341752:-] 0.5324 120 6 -10.16 -0.3707 MIMAT0015048 hsa-miR-3173 378925 RNF148 accggacggauaaagGAGGAAa |||||| guuuuaaaaauaaaaCUCCUUa 2 8 135 156 [hg19:7:122341731-122341752:-] 0.5324 120 6 -10.16 -0.4678 MIMAT0015057 hsa-miR-3180-5p 378925 RNF148 gcugcaccccgccucgcAGACCUUc ||||||: ccugaaaacuuaagaaaUCUGGAGa 2 9 196 220 [hg19:7:122341875-122341899:-] 0.6551 124 0 -11.15 -0.3306 MIMAT0015060 hsa-miR-548w 378925 RNF148 uccguuuuuggcgucaAUGAAAa |||||| auaaauugucuuauugUACUUUa 2 8 265 287 [hg19:7:122341808-122341830:-] 0.5633 120 6 -6.41 -0.2548 MIMAT0015060 hsa-miR-548w 378925 RNF148 uccguuuuuggcgucaAUGAAAa |||||| auaaauugucuuauugUACUUUa 2 8 57 79 [hg19:7:122341808-122341830:-] 0.5633 120 6 -6.41 -0.2838 MIMAT0015063 hsa-miR-3183 378925 RNF148 aggcucgcugaggcUCUCUCcg |||||| auuguacuuuauguAGAGAGaa 3 9 277 298 [hg19:7:122341797-122341818:-] 0.5579 120 0 -11.94 -0.2183 MIMAT0015063 hsa-miR-3183 378925 RNF148 aggcucgcugaggcUCUCUCcg |||||| auuguacuuuauguAGAGAGaa 3 9 69 90 [hg19:7:122341797-122341818:-] 0.5579 120 0 -11.94 -0.2431 MIMAT0015072 hsa-miR-320e 378925 RNF148 ggaagaguugGGUCGAAa ||||||| ----------CCAGCUUc 2 9 1 8 [hg19:7:122342087-122342094:-] 0.6524 140 7 -9.24 -0.1984 MIMAT0015084 hsa-miR-3199 378925 RNF148 uuGAAA--GAGGAUUCCGU-CAGGGa :||| | | ||:| || ||||| gcUUUUAGCCCAUAGGACAUGUCCCa 2 22 154 179 [hg19:7:122341916-122341941:-] 0.7415 124 0 -20.14 -0.9290 MIMAT0016852 hsa-miR-4298 378925 RNF148 gacggaggaggaGGACAGGGUc | ||||||| uagcccauaggaCAUGUCCCAu 2 11 159 180 [hg19:7:122341915-122341936:-] 0.7415 142 7 -16.69 -0.9289 MIMAT0016854 hsa-miR-4304 378925 RNF148 acGGGACCUGUACGGcc :||| |||||| acUCCUUAUCAUGCC-- 3 16 357 371 [hg19:7:122341724-122341738:-] 0.5324 127 0 -13.22 -0.1242 MIMAT0016860 hsa-miR-4307 378925 RNF148 ccuuuguccuuuUUUGUAa |||||| auuuuaacuugcAAACAUu 2 8 107 125 [hg19:7:122341970-122341988:-] 0.7174 120 6 -5.27 -0.1696 MIMAT0016881 hsa-miR-4260 378925 RNF148 acccugagguacGGGGUUc |||||| gacacauacaaaCCCCAAg 2 8 77 95 [hg19:7:122342000-122342018:-] 0.7136 120 6 -16.60 -0.1979 MIMAT0016882 hsa-miR-4253 378925 RNF148 ugGGGGACCUGUACGGga |:||| |||||| aaCUCCUUAUCAUGCC-- 3 17 356 371 [hg19:7:122341724-122341739:-] 0.5324 132 0 -17.96 -0.1218 MIMAT0016882 hsa-miR-4253 378925 RNF148 ugGGGGACCUGUACGGGa |:||| ||||||| aaCUCCUUAUCAUGCCCa 2 17 148 165 [hg19:7:122341722-122341739:-] 0.5324 152 7 -22.18 -1.0861 MIMAT0016926 hsa-miR-4328 378925 RNF148 uuaggacccUUUUGAcc |||||| uuuaaaaauAAAACUcc 3 9 345 361 [hg19:7:122341734-122341750:-] 0.5324 120 0 -1.91 -0.1703 MIMAT0016926 hsa-miR-4328 378925 RNF148 uuaggacccUUUUGAcc |||||| uuuaaaaauAAAACUcc 3 9 137 153 [hg19:7:122341734-122341750:-] 0.5324 120 0 -1.91 -0.1676 MIMAT0000073 hsa-miR-19a 378925 RNF148 aguCAAAACGUAUCUAAAC-GUGu || |||: | | |||| ||| acuGUGUUGU-UUGCUUUGACACa 2 21 60 82 [hg19:7:122342013-122342035:-] 0.7097 122 0 -11.42 -1.2115 MIMAT0000074 hsa-miR-19b 378925 RNF148 aguCAAAACGUACCUAAAC-GUGu || |||: | | |||| ||| acuGUGUUGU-UUGCUUUGACACa 2 21 60 82 [hg19:7:122342013-122342035:-] 0.7097 122 0 -11.79 -1.2115 MIMAT0000241 hsa-miR-208a 378925 RNF148 ugUUCGAA--AAACGAGCAGAAUa ||| || | |:|||||| caAAGAUUAGAUAAAUUGUCUUAu 2 21 255 278 [hg19:7:122341817-122341840:-] 0.5633 131 6 -10.99 -0.1751 MIMAT0000241 hsa-miR-208a 378925 RNF148 ugUUCGAA--AAACGAGCAGAAUa ||| || | |:|||||| caAAGAUUAGAUAAAUUGUCUUAu 2 21 47 70 [hg19:7:122341817-122341840:-] 0.5633 131 6 -10.99 -0.2030 MIMAT0000278 hsa-miR-221 378925 RNF148 cuuuggguCGUCUGUUACAUCga |:| : |||||| gucuuauuGUACUUUAUGUAGag 3 16 64 86 [hg19:7:122341801-122341823:-] 0.5579 123 0 -9.33 -0.1001 MIMAT0000449 hsa-miR-146a 378925 RNF148 uuggGUACCUUAAG-UCAAGAGu | | | | | ||||||| ccagCUUCAACUGCGAGUUCUCa 2 19 1 23 [hg19:7:122342072-122342094:-] 0.6524 141 7 -13.80 -0.8481 MIMAT0000449 hsa-miR-146a 378925 RNF148 uuggguaccUUAAGUC-AAGAGu | ||||| ||||| agagagaaaAUUUCAGCUUCUCu 2 14 291 313 [hg19:7:122341782-122341804:-] 0.5525 121 0 -11.23 -0.6818 MIMAT0000449 hsa-miR-146a 378925 RNF148 uuggguaccUUAAGUC-AAGAGu | ||||| ||||| agagagaaaAUUUCAGCUUCUCu 2 14 83 105 [hg19:7:122341782-122341804:-] 0.5525 121 0 -11.23 -0.7415 MIMAT0000753 hsa-miR-342-3p 378925 RNF148 ugccCACGCUA-AAG-ACACACUcu || | || | | |||||| acauGUCCCAUGUGCAAGUGUGAca 3 20 170 194 [hg19:7:122341901-122341925:-] 0.7415 125 0 -10.33 -0.1235 MIMAT0000761 hsa-miR-324-5p 378925 RNF148 ugUGGUUACGGGAUCCCCUACGc |:: | || || || |||| acAUUUUUUCCAUAAGGCAUGCa 2 22 121 143 [hg19:7:122341952-122341974:-] 0.7294 125 0 -11.85 -0.1042 MIMAT0001627 hsa-miR-433 378925 RNF148 uguggcuccucGGGUAGUACua |::|||||| aaauaaaacucCUUAUCAUGcc 3 12 350 371 [hg19:7:122341724-122341745:-] 0.5324 127 0 -10.18 -0.1280 MIMAT0002809 hsa-miR-146b-5p 378925 RNF148 ucggauaccuuaagUCAAGAGu ||||||| cagcuucaacugcgAGUUCUCa 2 9 2 23 [hg19:7:122342072-122342093:-] 0.6524 140 7 -14.65 -0.8481 MIMAT0002809 hsa-miR-146b-5p 378925 RNF148 ucggauaccUUAAGUC-AAGAGu | ||||| ||||| agagagaaaAUUUCAGCUUCUCu 2 14 291 313 [hg19:7:122341782-122341804:-] 0.5525 121 0 -11.23 -0.6818 MIMAT0002809 hsa-miR-146b-5p 378925 RNF148 ucggauaccUUAAGUC-AAGAGu | ||||| ||||| agagagaaaAUUUCAGCUUCUCu 2 14 83 105 [hg19:7:122341782-122341804:-] 0.5525 121 0 -11.23 -0.7415 MIMAT0002817 hsa-miR-495 378925 RNF148 uuCUUCACGUGGUACA-AACAAa |||| || | ||| ||||| auGAAG-ACAAC-UGUGUUGUUu 2 21 51 71 [hg19:7:122342024-122342044:-] 0.6810 120 0 -13.59 -0.6431 MIMAT0002870 hsa-miR-499-5p 378925 RNF148 uuuguagugacguuCAGAAUu |||||| agauuagauaaauuGUCUUAu 2 8 258 278 [hg19:7:122341817-122341837:-] 0.5633 120 6 -5.06 -0.1701 MIMAT0002870 hsa-miR-499-5p 378925 RNF148 uuuguagugacguuCAGAAUu |||||| agauuagauaaauuGUCUUAu 2 8 50 70 [hg19:7:122341817-122341837:-] 0.5633 120 6 -5.06 -0.1974 MIMAT0003267 hsa-miR-599 378925 RNF148 caAAC-UAUUUGACUGUGUug ||| |: :||||||| ugUUGUUUGCUUUGACACAua 3 19 64 84 [hg19:7:122342011-122342031:-] 0.7097 129 0 -14.00 -0.1646 MIMAT0004924 hsa-miR-876-5p 378925 RNF148 accACUAAGUGUUUCUUUAGGu ||| : ||||||||: uccUGAAAACUUAAGAAAUCUg 2 20 195 216 [hg19:7:122341879-122341900:-] 0.6551 135 0 -10.33 -0.1012 MIMAT0004960 hsa-miR-208b 378925 RNF148 uguuuggaaaacaAGCAGAAUa |:|||||| aagauuagauaaaUUGUCUUAu 2 10 257 278 [hg19:7:122341817-122341838:-] 0.5633 129 6 -9.45 -0.1767 MIMAT0004960 hsa-miR-208b 378925 RNF148 uguuuggaaaacaAGCAGAAUa |:|||||| aagauuagauaaaUUGUCUUAu 2 10 49 70 [hg19:7:122341817-122341838:-] 0.5633 129 6 -9.45 -0.2048

DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G098261 RNF148 Homo sapiens 378925

DNA & RNA Element - TargetScan Gene Name UTR Region Start UTR Region End AIR Total Normalized 3P-seq-tags & Pseudocounts Strand hg19_chromosome Genome Start Genome End RNF148 1 169 100 5.01 - chr7 122341717 122341886

DNA & RNA Element - RepTar Gene Name miRNA Begin End Profile RNF148 hsa-miR-142-5p beg:67 end:82 pic:3' TCATCACGAAAGATGAAATAC 5'& || ||||||||| &5' ---------TTGTACTTTATG 3' RNF148 hsa-miR-4253 beg:146 end:165 pic:3' TGGGGGACCTGTACGGGA 5'& ||.||.| ||||||| &5' ACTCCTTAT-CATGCCC- 3' RNF148 hsa-miR-513a-3p beg:117 end:134 pic:3' GGAAGAGTCTTTCCACTTTAAAT 5'& ||.||||||||||. &5' ---------AAGGGTGAAATTTG 3' RNF148 hcmv-miR-UL36star beg:0 end:13 pic:3' CGTGCAACTTTTGTGGACCTTT 5'& ||| |.|||||.| &5' -------GAA---ATCTGGAGA 3' RNF148 hsa-miR-1206 beg:100 end:121 pic:3' CGAATTTGTAGATG------TACTTGT 5'& ||||| ||||||| &5' ---------TCTACCCAAGTATGAACA 3' RNF148 hsa-miR-1285 beg:147 end:166 pic:3' TCCAGAGTGAAACA-ACGGGTCT 5'& ||| ||| ||||||| &5' ----CTC-CTTATCATGCCCAG- 3' RNF148 hsa-miR-20a beg:60 end:80 pic:3' GATGGACGTGATATTCGTGAAAT 5'& .||. .||| |.|||||| &5' ----TTGTCTTATT-GTACTTTA 3' RNF148 hsa-miR-22star beg:0 end:16 pic:3' ATTTCGAACGGT-GACTTCTTGA 5'& | |||.||||.| &5' --------GAAATCTGGAGAATT 3' RNF148 hsa-miR-3123 beg:4 end:21 pic:3' CTAATTTGTTAAGAGAC 5'& |..| ||||.|||| &5' ---TGGAGAATTTTCTG 3' RNF148 hsa-miR-3129 beg:25 end:48 pic:3' TTTGGT-TAGAGATGTG-ATGACG 5'& ||||| ||||.| || ||| &5' -AACCAGATCTTTCCAAATAC--- 3' RNF148 hsa-miR-3132 beg:96 end:111 pic:3' AGGAGACTCGAGGAAGAGATGGGT 5'& |||||||||||| &5' ------------CTTCTCTACCCA 3' RNF148 hsa-miR-3147 beg:147 end:166 pic:3' AGTGTGGGAGGAGTG--ACGGGTTGG 5'& |||||.|. ||||||.| &5' -------CTCCTTATCATGCCCAGC- 3' RNF148 hsa-miR-3160 beg:90 end:102 pic:3' ACCCGAAAGATCAGAGTCGAGA 5'& |.||||||. &5' ------------TTTCAGCTT- 3' RNF148 hsa-miR-320d beg:148 end:166 pic:3' AGGAG-AGT-TGGGTCGAAAA 5'& ||||. ||| .|||||| &5' TCCTTATCATGCCCAGC---- 3' RNF148 hsa-miR-320e beg:149 end:166 pic:3' GGAAGAGT-TGGGTCGAAA 5'& |||| ||| .|||||| &5' CCTTATCATGCCCAGC--- 3' RNF148 hsa-miR-335star beg:2 end:25 pic:3' CCAGTCCTCGTTATT-ACTTTTT 5'& || |||| ||||.| &5' --TCTGGAGAATTTTCTGAAGA- 3' RNF148 hsa-miR-362-5p beg:99 end:126 pic:3' TGAG-TGTGGATCCAAG--GTTCCTAA 5'& ||| || || || |||||.| &5' -CTCTAC-CCAAGTATGAACAAGGGT- 3' RNF148 hsa-miR-375 beg:102 end:123 pic:3' AGTGCGCTCGGCTTGCTTGTTT 5'& .|| | ||. |.||||||. &5' -TACCCAAGT---ATGAACAAG 3' RNF148 hsa-miR-4308 beg:81 end:99 pic:3' TTCTTCTTTGAGGTCCCT 5'& .||| |||.|.||| &5' GAGAGAAAATTTCAG--- 3' RNF148 hsa-miR-454 beg:61 end:77 pic:3' TGGGATATTCGTTATAACGTGAT 5'& |. |||||.||| &5' ---------GTCTTATTGTACT- 3' RNF148 hsa-miR-517star beg:1 end:12 pic:3' TCTGTCACGAAGGTAGATCTCC 5'& ||||.||| &5' -------------ATCTGGAG- 3' RNF148 hsa-miR-585 beg:156 end:166 pic:3' ATCGTATGTCTATGCGGGT 5'& |.||||| &5' ------------ATGCCCA 3' RNF148 hsa-miR-765 beg:90 end:106 pic:3' GTAGTGGAAGGAAGAGGAGGT 5'& .||| ||.|||.| &5' ------TTTCAG-CTTCTCTA 3' RNF148 hsa-miR-877 beg:92 end:106 pic:3' GGGACGCGGTAGAGGAGATG 5'& .|| ||.|||||| &5' -------TCAGCTTCTCTAC 3' RNF148 hsa-miR-890 beg:93 end:115 pic:3' GTTGACTACGGAAAGGTTCAT 5'& ||.|| .|| ||||||| &5' CAGCTTC--TCTACCCAAGTA 3' RNF148 hsa-miR-939 beg:82 end:105 pic:3' GTGGGGGTCTC----GGAGTCGAGGGGT 5'& |||| ..||||||.|.| &5' -------AGAGAAAATTTCAGCTTCTC- 3' RNF148 hsv1-miR-H5-3p beg:3 end:22 pic:3' GGCCTCCCAAACCTAGAGACTG 5'& |.|||| |.||||| &5' CTGGAGAAT-----TTTCTGA- 3' RNF148 hsv2-miR-H20 beg:22 end:33 pic:3' TCTTTCCCCAGGCATTGGTTT 5'& .|||||||.| &5' -----------TGTAACCAGA 3'

DNA & RNA Element - miRcode Gene Name Type microRNA Seed Position Seed Type Total Cons% Tr Region RNF148 High_conserved miR-130ac/301ab/301b/301b-3p/454/721/4295/3666 chr7:122342308 7-mer-m8 40 CDS RNF148 High_conserved miR-135ab/135a-5p chr7:122342694 7-mer-m8 38 CDS RNF148 High_conserved miR-145 chr7:122342950 7-mer-A1 4 5pUTR RNF148 High_conserved miR-146ac/146b-5p chr7:122342072 8-mer 11 3pUTR, CDS RNF148 High_conserved miR-19ab chr7:122342309 7-mer-m8 31 CDS RNF148 High_conserved miR-203 chr7:122342664 7-mer-m8 44 CDS RNF148 High_conserved miR-205/205ab chr7:122342565 7-mer-A1 36 CDS RNF148 High_conserved miR-217 chr7:122342248 7-mer-m8 2 CDS RNF148 High_conserved miR-23abc/23b-3p chr7:122342107 7-mer-A1 49 CDS RNF148 High_conserved miR-24/24ab/24-3p chr7:122342239 7-mer-A1 44 CDS RNF148 Medium_conserved miR-539/539-5p chr7:122342834 7-mer-A1 11 5pUTR RNF148 Medium_conserved miR-873 chr7:122342569 7-mer-A1 36 CDS RNF148 Medium_conserved miR-873 chr7:122342713 7-mer-A1 44 CDS RNF148 Medium_conserved miR-136 chr7:122342806 7-mer-m8 44 5pUTR RNF148 Medium_conserved miR-186 chr7:122342142 7-mer-m8 4 CDS RNF148 Medium_conserved miR-186 chr7:122342869 7-mer-A1 22 5pUTR RNF148 Medium_conserved miR-346 chr7:122342507 7-mer-m8 29 CDS RNF148 Medium_conserved miR-370 chr7:122342522 7-mer-m8 44 CDS RNF148 Medium_conserved miR-376c/741-5p chr7:122342286 7-mer-m8 36 CDS RNF148 Medium_conserved miR-411 chr7:122342727 7-mer-A1 29 CDS RNF148 Medium_conserved miR-411 chr7:122342968 7-mer-A1 0 5pUTR RNF148 Medium_conserved miR-125a-3p/1554 chr7:122342678 8-mer 38 CDS RNF148 Medium_conserved miR-494 chr7:122342760 7-mer-A1 31 CDS RNF148 Medium_conserved miR-494 chr7:122342990 7-mer-A1 38 5pUTR

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score RNF148 RAID00006540 hsa-miR-1229-5p miRNA MIMAT0022942 RNF148 mRNA 378925 Prediction 0.1828 RNF148 RAID00042000 hsa-miR-324-5p miRNA MIMAT0000761 RNF148 mRNA 378925 Prediction 0.1828 RNF148 RAID00075928 hsa-miR-19b-3p miRNA MIMAT0000074 RNF148 mRNA 378925 Prediction 0.1828 RNF148 RAID00113715 hsa-miR-1285-3p miRNA MIMAT0005876 RNF148 mRNA 378925 Prediction 0.1828 RNF148 RAID00266596 hsa-miR-3187-5p miRNA MIMAT0019216 RNF148 mRNA 378925 Prediction 0.1828 RNF148 RAID00396861 hsa-miR-4451 miRNA MIMAT0018973 RNF148 mRNA 378925 Prediction 0.1828 RNF148 RAID00636568 hsa-miR-548k miRNA MIMAT0005882 RNF148 mRNA 378925 Prediction 0.1828 RNF148 RAID00687444 hsa-miR-876-5p miRNA MIMAT0004924 RNF148 mRNA 378925 Prediction 0.1828 RNF148 RAID00781771 hsa-miR-3978 miRNA MIMAT0019363 RNF148 mRNA 378925 Prediction 0.1828 RNF148 RAID00787038 hsa-miR-612 miRNA MIMAT0003280 RNF148 mRNA 378925 Prediction 0.1828 RNF148 RAID00881103 hsa-miR-599 miRNA MIMAT0003267 RNF148 mRNA 378925 Prediction 0.1828 RNF148 RAID00955962 hsa-miR-6860 miRNA MIMAT0027622 RNF148 mRNA 378925 Prediction 0.1828 RNF148 RAID01024060 hsa-miR-495-3p miRNA MIMAT0002817 RNF148 mRNA 378925 Prediction 0.1828 RNF148 RAID01214398 hsa-miR-146a-5p miRNA MIMAT0000449 RNF148 mRNA 378925 Prediction 0.1828 RNF148 RAID01428297 hsa-miR-433-3p miRNA MIMAT0001627 RNF148 mRNA 378925 Prediction 0.1828 RNF148 RAID01497049 hsa-miR-208b-3p miRNA MIMAT0004960 RNF148 mRNA 378925 Prediction 0.1828 RNF148 RAID01508212 hsa-miR-6844 miRNA MIMAT0027589 RNF148 mRNA 378925 Prediction 0.1828 RNF148 RAID01659149 hsa-miR-5189-5p miRNA MIMAT0021120 RNF148 mRNA 378925 Prediction 0.1828 RNF148 RAID02069479 hsa-miR-499a-5p miRNA MIMAT0002870 RNF148 mRNA 378925 Prediction 0.1828 RNF148 RAID02366236 hsa-miR-221-3p miRNA MIMAT0000278 RNF148 mRNA 378925 Prediction 0.1828 RNF148 RAID02403844 hsa-miR-19a-3p miRNA MIMAT0000073 RNF148 mRNA 378925 Prediction 0.1828 RNF148 RAID02558052 hsa-miR-4253 miRNA MIMAT0016882 RNF148 mRNA 378925 Prediction 0.1828 RNF148 RAID03128038 hsa-miR-8054 miRNA MIMAT0030981 RNF148 mRNA 378925 Prediction 0.1828 RNF148 RAID03301894 hsa-miR-4684-5p miRNA MIMAT0019769 RNF148 mRNA 378925 Prediction 0.1828 RNF148 RAID03366800 hsa-miR-208a-3p miRNA MIMAT0000241 RNF148 mRNA 378925 Prediction 0.1828 RNF148 RAID03505455 hsa-miR-6862-5p miRNA MIMAT0027625 RNF148 mRNA 378925 Prediction 0.1828 RNF148 RAID03657547 hsa-miR-548av-5p miRNA MIMAT0022303 RNF148 mRNA 378925 Prediction 0.1828 RNF148 RAID03835618 hsa-miR-146b-5p miRNA MIMAT0002809 RNF148 mRNA 378925 Prediction 0.1828 RNF148 RAID03907239 hsa-miR-342-3p miRNA MIMAT0000753 RNF148 mRNA 378925 Prediction 0.1828 RNF148 RAID04029800 hsa-miR-6873-3p miRNA MIMAT0027647 RNF148 mRNA 378925 Prediction 0.1828