SNP - dbSNP |
dbSNP | Type | Alleles | Het | Se(het) | Fxn-class | Gene Name | Assembly | Chr-pos | Sequence | Entrez Gene |
rs7067 | snp | C/T | 0.499942 | 0.00539106 | utr-variant-3-prime | PWP2 | GRCh38.p7 | 21:44131077 | GAGACTTATTTATAT[C/T]TTTAACATAAAGGTT | 5822 |
rs756553 | snp | C/T | 0.398987 | 0.200768 | synonymous-codon | PWP2 | GRCh38.p7 | 21:44118766 | CGTTCTCTGCAGCAT[C/T]TCAGATCAGAGCATC | 5822 |
rs756554 | snp | A/C | 0.395266 | 0.203476 | intron-variant | PWP2 | GRCh38.p7 | 21:44118844 | TTCAGGTTTGTCCCC[A/C]GCCTGGGTGGTAGAG | 5822 |
rs756555 | snp | A/T | 0.472989 | 0.113031 | intron-variant | PWP2 | GRCh38.p7 | 21:44118901 | TGCCCGGCTACAGGC[A/T]TACTTGACAGCCACC | 5822 |
rs885872 | snp | C/T | 0.377977 | 0.21476 | downstream-variant-500B | PWP2 | GRCh38.p7 | 21:44131294 | AGCGGGGGCTCTGCC[C/T]TGTGACCTGTGCATA | 5822 |
rs1051979 | snp | A/T | 0 | 0 | utr-variant-3-prime, upstream-variant-2KB, nc-transcript-variant | TRAPPC10, PWP2 | GRCh38.p7 | 21:44105745 | GTGTTTGAGACAAGC[A/T]GGTTTTGTTGATAAA | 5822 |
rs1051981 | snp | A/G | 0.376592 | 0.215579 | utr-variant-3-prime, upstream-variant-2KB, nc-transcript-variant | TRAPPC10, PWP2 | GRCh38.p7 | 21:44105804 | ATGCAATGTGTATCT[A/G]AAAAGCAAGGAATTT | 5822 |
rs1131297 | snp | C/T | 0 | 0 | synonymous-codon | PWP2 | GRCh38.p7 | 21:44120362 | GGTCAAGGTGTGGAA[C/T]ACCCTCAGCGGCTTC | 5822 |
rs1858665 | snp | C/T | 0.482534 | 0.0918038 | intron-variant | PWP2 | GRCh38.p7 | 21:44117172 | GAGTCAAGACTTGAA[C/T]GGGGACTGGAGGAAG | 5822 |
rs2020944 | snp | A/G | 0.498084 | 0.0308911 | intron-variant | PWP2 | GRCh38.p7 | 21:44122712 | TGGGGAGGCTGAGGC[A/G]GGTGGTTTGCTTGAG | 5822 |
rs2020945 | snp | A/G | 0.407066 | 0.1945 | missense | PWP2 | GRCh38.p7 | 21:44109038 | CTAAATTTTACCTGC[A/G]ATGGAAATTCAGTTA | 5822 |
rs2020946 | snp | C/G | 0.482008 | 0.0931261 | intron-variant | PWP2 | GRCh38.p7 | 21:44109234 | TAAGGGAGCCCAGGA[C/G]AGGACTACAGGACAG | 5822 |
rs2071142 | snp | A/G | 0.44087 | 0.161458 | intron-variant | PWP2 | GRCh38.p7 | 21:44119545 | TCCTGTCCCCGTCCC[A/G]TTGGCCTCTGTGCCT | 5822 |
rs2071143 | snp | A/G | 0.40396 | 0.196968 | synonymous-codon | PWP2 | GRCh38.p7 | 21:44121038 | CTCCTGGGACAAGAC[A/G]GTGCGCCTATGGGAC | 5822 |
rs2071144 | snp | A/G | 0.238749 | 0.249747 | intron-variant | PWP2 | GRCh38.p7 | 21:44121273 | GGTTGGCAGTACCTA[A/G]GAGACAGCAGATTGG | 5822 |
rs2071145 | snp | A/G | 0.161267 | 0.233723 | intron-variant | PWP2 | GRCh38.p7 | 21:44121637 | GTACTAGAGGCAGCC[A/G]TGGCCTCCTGTGTTC | 5822 |
rs2071146 | snp | A/C | 0.482979 | 0.0906686 | intron-variant | PWP2 | GRCh38.p7 | 21:44123139 | GGGCTGTGAGGCTCA[A/C]CTGGGTGGGGGTCAG | 5822 |
rs2071147 | snp | C/T | 0.482979 | 0.0906686 | downstream-variant-500B | PWP2 | GRCh38.p7 | 21:44131355 | CTGACCTCTTGGGGA[C/T]GCTTTGGAGTCTGGG | 5822 |
rs2187313 | snp | C/T | 0.336597 | 0.234523 | synonymous-codon | PWP2 | GRCh38.p7 | 21:44124713 | TCTTGCAACCTGTCT[C/T]TGGACGCCATGGAGG | 5822 |
rs2242951 | snp | G/T | 0.29175 | 0.246489 | intron-variant | PWP2 | GRCh38.p7 | 21:44115121 | AGGGGCTGTGCCGGG[G/T]TGTCTTCCTGTGCCT | 5822 |
rs2242952 | snp | C/G/T | | | intron-variant | PWP2 | GRCh38.p7 | 21:44121564 | CCGGAAGCCAGATGC[C/G/T]GCTGCCCAGGGATCT | 5822 |
rs2242953 | snp | A/G | 0.488905 | 0.0736498 | intron-variant | PWP2 | GRCh38.p7 | 21:44125453 | GATGGCTTCCTGCCC[A/G]GGGTCCTGTGTACAA | 5822 |
rs2242954 | snp | C/G | 0.488905 | 0.0736498 | intron-variant, utr-variant-3-prime | PWP2 | GRCh38.p7 | 21:44127682 | GGCGTCAAGAGAGGA[C/G]GACGCATGCGTGTAC | 5822 |
rs2243999 | snp | C/T | 0.406058 | 0.19531 | intron-variant | PWP2 | GRCh38.p7 | 21:44114151 | CCCCTGGGGTAGCTG[C/T]GCGGTGGTGACCTCT | 5822 |
rs2251267 | snp | C/T | 0.482905 | 0.0908579 | intron-variant | PWP2 | GRCh38.p7 | 21:44129992 | TAGAGTTCACGTAAG[C/T]GCATTGTTCCTTGGA | 5822 |
rs2299821 | snp | A/G | 0.00993419 | 0.0697739 | intron-variant | PWP2 | GRCh38.p7 | 21:44117271 | GTGTGCCTGCTAGGC[A/G]GGGACTGCGGGCTGT | 5822 |
rs2329707 | snp | A/G | 0.481396 | 0.0946345 | intron-variant | PWP2 | GRCh38.p7 | 21:44110978 | AGTGTCTGGCTTCAA[A/G]CAACAGGCTGACTCT | 5822 |
rs2516519 | snp | C/T | 0.483852 | 0.0883933 | intron-variant | PWP2 | GRCh38.p7 | 21:44112893 | TGATGTATCCAAAGC[C/T]CATTTTTAAGGCTTT | 5822 |
rs2516520 | snp | C/T | 0.0486741 | 0.148216 | utr-variant-3-prime, upstream-variant-2KB, downstream-variant-500B | TRAPPC10, PWP2 | GRCh38.p7 | 21:44106195 | CTATACTACTTTTTA[C/T]AAAAGGGCAAACTGG | 5822 |
rs2516521 | snp | C/T | 0.481009 | 0.0955756 | intron-variant | PWP2 | GRCh38.p7 | 21:44108015 | AATAAGAGGGGGCCG[C/T]GGAGCCGGCCTGGGG | 5822 |
rs2516524 | snp | A/G | 0 | 0 | utr-variant-3-prime, upstream-variant-2KB, downstream-variant-500B | TRAPPC10, PWP2 | GRCh38.p7 | 21:44106018 | CAGCACAGCCTAGGA[A/G]GGTCAGATCCTGTAT | 5822 |
rs2776368 | snp | C/T | 0.489024 | 0.0732638 | intron-variant | PWP2 | GRCh38.p7 | 21:44112191 | taaaatgctatcaaa[C/T]agtatcacatgctac | 5822 |
rs2776369 | snp | C/G | 0 | 0 | intron-variant | PWP2 | GRCh38.p7 | 21:44114926 | TGGGTGGCTGTGGTC[C/G]AGTCTTTGCGGCTCT | 5822 |
rs2776371 | snp | C/G | | | intron-variant | PWP2 | GRCh38.p7 | 21:44123210 | TGGGTGGCCTTGGGG[C/G]CTGGACCTGTGTCCC | 5822 |
rs2838489 | snp | C/G | 0.482609 | 0.0916147 | intron-variant | PWP2 | GRCh38.p7 | 21:44128796 | CCACCCCGTGGTTGA[C/G]CAGCTTGGGAAATGG | 5822 |
rs2838490 | snp | C/T | 0.485799 | 0.0830599 | intron-variant | PWP2 | GRCh38.p7 | 21:44128915 | TCTTGGAGGGATTGC[C/T]GCATTCGTAGGACCA | 5822 |
rs2850152 | snp | A/T | 0.5 | 0 | downstream-variant-500B, upstream-variant-2KB | TRAPPC10, PWP2 | GRCh38.p7 | 21:44106690 | GGAAACATTCGGATT[A/T]TTTTTTTTTTTTTTT | 5822 |
rs2850153 | snp | A/G | 0.482979 | 0.0906686 | intron-variant | PWP2 | GRCh38.p7 | 21:44107579 | GCTGTCTGCGCGCCC[A/G]TGGCCTCGGGGACGC | 5822 |
rs2850154 | snp | G/T | 0.400504 | 0.199621 | intron-variant | PWP2 | GRCh38.p7 | 21:44112648 | ACACAGCTCGGCTGC[G/T]TATGGGGAAGCTGGA | 5822 |
rs2850155 | snp | A/G | 0.491577 | 0.0643472 | intron-variant | PWP2 | GRCh38.p7 | 21:44116329 | AGATGCCGGGAGAGC[A/G]TTTGGCAAGGGTGGA | 5822 |
rs2850156 | snp | C/T | 0.488965 | 0.0734569 | intron-variant | PWP2 | GRCh38.p7 | 21:44119148 | CCCTTGCTCAGGGGT[C/T]GGGGGTCATAGCCTG | 5822 |
rs2850157 | snp | C/T | 0.404605 | 0.196462 | intron-variant | PWP2 | GRCh38.p7 | 21:44120326 | GTTGGGGTCTGCCCC[C/T]GCCCCTCCTGTCCTG | 5822 |
rs2850158 | snp | A/G | 0 | 0 | intron-variant | PWP2 | GRCh38.p7 | 21:44123251 | AACCTGTTCAGCAGA[A/G]GGTCTTCCTCCAGAA | 5822 |
rs2850159 | snp | A/G | 0 | 0 | intron-variant | PWP2 | GRCh38.p7 | 21:44123267 | GGTCTTCCTCCAGAA[A/G]GAAGTAGCGACCCTG | 5822 |
rs2855650 | snp | C/T | 0.499759 | 0.0109798 | intron-variant | PWP2 | GRCh38.p7 | 21:44113373 | cctgacctcgtgatc[C/T]gcccgccttggcctc | 5822 |
rs2855651 | snp | C/T | 0.483126 | 0.0902898 | intron-variant | PWP2 | GRCh38.p7 | 21:44114933 | CTGTGGTCCAGTCTT[C/T]GCGGCTCTGAAGTGT | 5822 |
rs2855652 | snp | C/G | 0.383877 | 0.211225 | intron-variant | PWP2 | GRCh38.p7 | 21:44119359 | GGTGGGCCTGAGCCG[C/G]GTACCCCAGCTTCCC | 5822 |
rs2855653 | snp | A/G | 0.381308 | 0.21274 | intron-variant | PWP2 | GRCh38.p7 | 21:44120262 | GGGCAAGCATCTTAG[A/G]TGGGGCGGCATGGGG | 5822 |
rs2855654 | snp | A/G | 0.00438332 | 0.0466095 | intron-variant | PWP2 | GRCh38.p7 | 21:44113153 | tttgtttgttttgag[A/G]cagagtcttgccctg | 5822 |
rs3831654 | in-del | -/GAGG/GAGT | | | intron-variant | PWP2 | GRCh38.p7 | 21:44117109 | TCAGTGCCCGTGAGT[-/GAGG/GAGT]CCGTGCCCGTCAGTG | 5822 |
rs3948892 | snp | A/G | 0.0142736 | 0.0832652 | intron-variant | PWP2 | GRCh38.p7 | 21:44125942 | TGGGGTCAAAGAGCA[A/G]GGGTAGGAGACGAGG | 5822 |
rs4819373 | snp | A/C | 0.489024 | 0.0732638 | intron-variant | PWP2 | GRCh38.p7 | 21:44111831 | ctcctgcctcgggcc[A/C]ccctaccaagtagct | 5822 |
rs4819375 | snp | C/T | 0.227959 | 0.249026 | intron-variant | PWP2 | GRCh38.p7 | 21:44119767 | GAGGGTCTGTGGTGC[C/T]GGCAGCCGGCATCCA | 5822 |
rs5844173 | in-del | -/G | 0.489142 | 0.0728777 | intron-variant | PWP2 | GRCh38.p7 | 21:44118632 | CTGAAGTGAATTGTT[-/G]GAGTCTGGTGAGTGG | 5822 |
rs7280581 | snp | C/T | 0.482905 | 0.0908579 | intron-variant | PWP2 | GRCh38.p7 | 21:44129106 | GCCTAGGACAGGGCC[C/T]GGCCCTCCGCAGTGC | 5822 |
rs7282324 | snp | A/G | 0.356383 | 0.226236 | intron-variant | PWP2 | GRCh38.p7 | 21:44124905 | GGCCGTGAAGCCAGC[A/G]CCTGCCTCAGCTGTG | 5822 |
rs8127929 | snp | C/T | 0.0107246 | 0.0724382 | intron-variant | PWP2 | GRCh38.p7 | 21:44112606 | CACGCTAGTAGACTA[C/T]GCCGTACTGTTTACA | 5822 |
rs8130647 | snp | A/G | 0.481396 | 0.0946345 | intron-variant | PWP2 | GRCh38.p7 | 21:44112094 | caacaaaggatttag[A/G]atatgacatcaactt | 5822 |
rs9284512 | snp | A/G | 0.235564 | 0.249583 | upstream-variant-2KB, downstream-variant-500B | C21orf33, PWP2 | GRCh38.p7 | 21:44131632 | CCCAGCCTGTCCCTC[A/G]CCAGCGGTGTGGCCC | 5822 |
rs9306175 | snp | C/T | 0.25634 | 0.24992 | utr-variant-3-prime | PWP2 | GRCh38.p7 | 21:44130994 | ACCTGGCCCCAGGAG[C/T]GGGGCCGTGTGAACG | 5822 |
rs9978109 | snp | A/C | 0.115245 | 0.210632 | synonymous-codon, downstream-variant-500B | PWP2 | GRCh38.p7 | 21:44128032 | CACCAGCGTCACCCC[A/C]GGGAGGGTGCGCGAG | 5822 |
rs9980021 | snp | C/G | 0.153 | 0.230415 | intron-variant | PWP2 | GRCh38.p7 | 21:44119009 | TCCCCTCCCCCAGCT[C/G]TCTGCCATGGGGTGC | 5822 |
rs11089111 | snp | A/G | 0.489024 | 0.0732638 | intron-variant | PWP2 | GRCh38.p7 | 21:44110216 | tgaaggaaattaaaa[A/G]tgctactccagtgaa | 5822 |
rs11459330 | in-del | -/G | 0 | 0 | intron-variant | PWP2 | GRCh38.p7 | 21:44123237 | CCCAGGAGCTCAGAA[-/G]CCTGTTCAGCAGAAG | 5822 |
rs11550375 | snp | C/T | | | synonymous-codon | PWP2 | GRCh38.p7 | 21:44120712 | GAGCGGTGAGATCGT[C/T]TCTGCAGGGGCGCAG | 5822 |
rs11550376 | snp | A/G | 0.307096 | 0.243393 | utr-variant-5-prime | PWP2 | GRCh38.p7 | 21:44107410 | CGGCACACGTGCGAC[A/G]GCCGTGATGAAGTTC | 5822 |
rs11700553 | snp | C/T | | | intron-variant | PWP2 | GRCh38.p7 | 21:44112462 | gaatgcttgtgcaca[C/T]tgatagactacagca | 5822 |
rs11700919 | snp | A/T | 0.489083 | 0.0730708 | intron-variant | PWP2 | GRCh38.p7 | 21:44111254 | acccatgagctccaa[A/T]ggagacgcataagga | 5822 |
rs11701349 | snp | A/C | | | intron-variant | PWP2 | GRCh38.p7 | 21:44113874 | TGATGTGGGCGGGTA[A/C]TGAGGGGACCAGTGA | 5822 |
rs11908887 | snp | A/C | 0.067446 | 0.170804 | utr-variant-3-prime, upstream-variant-2KB, downstream-variant-500B | TRAPPC10, PWP2 | GRCh38.p7 | 21:44106271 | CCTACCTGGTTTTTA[A/C]ATTTTATTTTTCATG | 5822 |
rs11910166 | snp | A/G | 0.444444 | 0.157135 | intron-variant | PWP2 | GRCh38.p7 | 21:44109522 | GCCCTGCTGCCACTG[A/G]GCCTCACCAGTCGGA | 5822 |
rs17004631 | snp | A/G | 0.101658 | 0.201233 | intron-variant | PWP2 | GRCh38.p7 | 21:44126398 | TCTGCTGCACAGCAC[A/G]CGGAGCATTCTGGCG | 5822 |
rs17264579 | snp | A/G | 0.00795532 | 0.062565 | intron-variant | PWP2 | GRCh38.p7 | 21:44129259 | AGCCATGTGAGGGAT[A/G]TCACCCTCTGTTGCC | 5822 |
rs17856422 | snp | A/T | 0.0310059 | 0.120588 | missense | PWP2 | GRCh38.p7 | 21:44122191 | GCTCTGGCTGTGACT[A/T]TTCGCCCTGATGGTG | 5822 |
rs34215161 | in-del | -/T | | | intron-variant, utr-variant-3-prime | PWP2 | GRCh38.p7 | 21:44127757 | ATCCATTCATTCCTT[-/T]CCCAGGGGAGTAGTG | 5822 |
rs34455520 | in-del | -/A | | | intron-variant | PWP2 | GRCh38.p7 | 21:44118244 | CACAGAGAACGAAAA[-/A]TACTATGCTCATAAA | 5822 |
rs34550932 | in-del | -/C | | | intron-variant | PWP2 | GRCh38.p7 | 21:44126507 | CGCCAGCCAGAAACC[-/C]TGAGTGCTTCCATAT | 5822 |
rs34648825 | in-del | -/A | | | intron-variant | PWP2 | GRCh38.p7 | 21:44115416 | ATGTCCCTTTGCCAA[-/A]GTTCCCTAGCCTGAT | 5822 |
rs34880744 | snp | C/T | 0.00635571 | 0.056013 | missense | PWP2 | GRCh38.p7 | 21:44122260 | CCGTCTGCACCGCGT[C/T]CTCAGGGTCCCAGAA | 5822 |
rs35001460 | snp | C/T | 0.00316396 | 0.0396481 | missense | PWP2 | GRCh38.p7 | 21:44115313 | GGTTGTCCCAGCGCT[C/T]GGCTCCGAACACCCA | 5822 |
rs35040592 | in-del | -/C | 0.239037 | 0.24976 | intron-variant | PWP2 | GRCh38.p7 | 21:44114998 | TTCACCTGTTTGTCC[-/C]AGAAACTGGGAATGC | 5822 |
rs35267054 | in-del | -/G | | | intron-variant | PWP2 | GRCh38.p7 | 21:44123349 | TGTGGAACTGCTGGG[-/G]TGCTGGTGGTTCTGT | 5822 |
rs35292737 | in-del | -/G | | | intron-variant | PWP2 | GRCh38.p7 | 21:44120817 | TGGGGCTCAGGAGGG[-/G]CCCTCCTGTCTCCTG | 5822 |
rs35370163 | in-del | -/G | 0 | 0 | intron-variant | PWP2 | GRCh38.p7 | 21:44116602 | CCGCGTCTGGGCTGT[-/G]GGGGGAGGCTGGTCA | 5822 |
rs35798279 | in-del | -/T | 0 | 0 | utr-variant-3-prime, upstream-variant-2KB, downstream-variant-500B | TRAPPC10, PWP2 | GRCh38.p7 | 21:44106025 | CCTAGGAAGGTCAGA[-/T]TCCTGTATTAATTAC | 5822 |
rs35820620 | in-del | -/C | | | intron-variant | PWP2 | GRCh38.p7 | 21:44125686 | TGGGGGAAAGTGTCC[-/C]TTGGCATTTTCACAA | 5822 |
rs57123681 | snp | A/G | 0.00279162 | 0.0372561 | intron-variant | PWP2 | GRCh38.p7 | 21:44125301 | GGGTTGGGAACCACT[A/G]CTGTGGATGACCCTG | 5822 |
rs57855582 | snp | A/G | 0.230896 | 0.249269 | intron-variant | PWP2 | GRCh38.p7 | 21:44116856 | CTGGGTGGGGAAGGC[A/G]CCCACACAAGGCCCT | 5822 |
rs58016984 | in-del | -/A | | | intron-variant | PWP2 | GRCh38.p7 | 21:44108325 | CAAGGTGGCAAAAAA[-/A]TGTGCCTTGGAGCCT | 5822 |
rs58023015 | snp | C/T | 0.067446 | 0.170804 | utr-variant-3-prime | PWP2 | GRCh38.p7 | 21:44131151 | CGTGAGGATGAAGTC[C/T]ACACTTCAGATTAAA | 5822 |
rs58031932 | snp | C/G | 0.000798403 | 0.0199641 | intron-variant | PWP2 | GRCh38.p7 | 21:44122423 | GCTCCTGCAGCTTCT[C/G]CATTTTTGGCCTTGT | 5822 |
rs58611881 | snp | A/G | 0.00318978 | 0.0398085 | intron-variant | PWP2 | GRCh38.p7 | 21:44113907 | AGGACTCAGGGCTGT[A/G]TGGGTCTGAAATGAT | 5822 |
rs58714660 | snp | A/G | | | intron-variant | PWP2 | GRCh38.p7 | 21:44125285 | CATGGGCCAGTACCA[A/G]GGGTTGGGAACCACT | 5822 |
rs58734935 | snp | C/T | 0.000399281 | 0.0141238 | intron-variant | PWP2 | GRCh38.p7 | 21:44123963 | ACACTGTTCCTTGAG[C/T]CACTTGTTCCTTTTG | 5822 |
rs58771964 | snp | C/T | 0.000399281 | 0.0141238 | intron-variant | PWP2 | GRCh38.p7 | 21:44125524 | CCTCAGCACAGCCCT[C/T]GGCTCAGGTCCCACT | 5822 |
rs58851899 | snp | C/T | 0.000118776 | 0.00770544 | missense | PWP2 | GRCh38.p7 | 21:44113839 | GCCTCGCTATCATCG[C/T]CGATGAAGGTACTTG | 5822 |
rs58898739 | in-del | -/A | 0.412082 | 0.190341 | intron-variant, downstream-variant-500B | PWP2 | GRCh38.p7 | 21:44127870 | TAAAAAAAAAAAAAA[-/A]GAAAAAAAATGTTGG | 5822 |
rs59011068 | snp | C/T | 0.0314385 | 0.121371 | intron-variant | PWP2 | GRCh38.p7 | 21:44109991 | CTCCCTATTCCCTGA[C/T]ACAAACAATGCTGAA | 5822 |
rs59478103 | in-del | -/T | | | downstream-variant-500B, upstream-variant-2KB | TRAPPC10, PWP2 | GRCh38.p7 | 21:44106715 | TTTTTTTTTTTTTTT[-/T]CTCTGAGACAGTCAT | 5822 |
rs59487656 | snp | A/G | 0.0244538 | 0.107838 | intron-variant | PWP2 | GRCh38.p7 | 21:44126346 | CCTCCCTGCCCTGGC[A/G]GGACCCGTCCATTTG | 5822 |