DNA & RNA Element - UTRdb Gene Name Type ASPicDB UTRaspic Refseq ID Genome BOP1 3'UTR ff90ab7b09 BA010857 NM_015201 chr8:145456864-145485859:- BOP1 3'UTR dc23f5643b BA010858 NM_015201 chr8:145456809-145485859:- BOP1 3'UTR 02a611bc7f BA010859 NM_015201 chr8:145456863-145485859:- BOP1 3'UTR 79cd7302e9 BA010860 NM_015201 chr8:145456809-145485859:- BOP1 3'UTR 7f0de2522b NM_015201 chr8:145456809-145461366:- BOP1 3'UTR 9c85444305 NM_015201 chr8:145456863-145468842:- BOP1 3'UTR e915525a09 NM_015201 chr8:145456809-145468842:- BOP1 3'UTR 429ad70e69 NM_015201 chr8:145456863-145459732:- BOP1 3'UTR 2751be162e NM_015201 chr8:145456809-145459732:- BOP1 3'UTR de01a00c6d NM_015201 chr8:145456863-145459732:- BOP1 3'UTR c6a71c8a8e NM_015201 chr8:145456809-145459732:- BOP1 3'UTR 6bd2c8530d NM_015201 chr8:145458706-145485859:- BOP1 3'UTR d825d8313f NM_015201 chr8:145456863-145457694:- BOP1 3'UTR e5600cd4ac NM_015201 chr8:145456809-145457694:- BOP1 3'UTR 48a8949185 NM_015201 chr8:145458706-145468842:- BOP1 3'UTR 9902da8125 NM_015201 chr8:145458706-145459732:- BOP1 5'UTR ff90ab7b09 CA018193 NM_015201 chr8:145456929-145485928:- BOP1 5'UTR dc23f5643b CA018194 NM_015201 chr8:145456929-145485920:- BOP1 5'UTR 02a611bc7f CA018195 NM_015201 chr8:145456929-145485920:- BOP1 5'UTR 79cd7302e9 CA018196 NM_015201 chr8:145456929-145485920:-

DNA & RNA Element - circBase circRNA ID Chrom Start End Strand hsa_circ_0086020 chr8 145486055 145512985 - hsa_circ_0086024 chr8 145487680 145487900 - hsa_circ_0086017 chr8 145486055 145488605 - hsa_circ_0086015 chr8 145486055 145487750 - hsa_circ_0086014 chr8 145486055 145486459 - hsa_circ_0086033 chr8 145512775 145512985 - hsa_circ_0086029 chr8 145487969 145488426 - hsa_circ_0086018 chr8 145486055 145488820 - hsa_circ_0086027 chr8 145487819 145488131 - hsa_circ_0086023 chr8 145487209 145488426 - hsa_circ_0086026 chr8 145487819 145487900 - hsa_circ_0086025 chr8 145487680 145500292 - hsa_circ_0086013 chr8 145486055 145486273 - hsa_circ_0086028 chr8 145487969 145488131 - hsa_circ_0086021 chr8 145486055 145515120 - hsa_circ_0086016 chr8 145486055 145487900 - hsa_circ_0086031 chr8 145488702 145500292 - hsa_circ_0086019 chr8 145486055 145500292 - hsa_circ_0086030 chr8 145487969 145515120 - hsa_circ_0086022 chr8 145487209 145487900 - hsa_circ_0086032 chr8 145500211 145515120 -

DNA & RNA Element - circRNADb circRNA ID Chrom Start End Strand Samples hsa_circ_16116 chr8 145318733 145319045 - H9 hESCs hsa_circ_24006 chr8 145500211 145512985 - H9 hESCs

DNA & RNA Element - CircNet Circ ID GITPosition Express Symbol Entrez Category Strand Refered Name hsa-circ-BOP1-overlap.2 NM_015201Tchr8:145486055-145487900 expressed BOP1 23246 protein-coding - hsa_circ_0086016 hsa-circ-BOP1-overlap.3 NM_015201Tchr8:145486055-145486459 expressed BOP1 23246 protein-coding - hsa_circ_0086014 hsa-circ-BOP1-overlap.4 NM_015201Tchr8:145486055-145488820 expressed BOP1 23246 protein-coding - hsa_circ_0086018 hsa-circ-BOP1-overlap.5 NM_015201Tchr8:145486055-145487750 expressed BOP1 23246 protein-coding - hsa_circ_0086015 hsa-circ-BOP1-overlap.6 NM_015201Tchr8:145486055-145488605 expressed BOP1 23246 protein-coding - hsa_circ_0086017 hsa-circ-BOP1.1 NM_015201Tchr8:145500211-145515120 expressed BOP1 23246 protein-coding - hsa_circ_0086032 hsa-circ-BOP1.10 NM_015201Tchr8:145488702-145500292 expressed BOP1 23246 protein-coding - hsa_circ_0086031 hsa-circ-BOP1.11 NM_015201Tchr8:145487680-145487900 expressed BOP1 23246 protein-coding - hsa_circ_0086024 hsa-circ-BOP1.12 NM_015201Tchr8:145487819-145488131 expressed BOP1 23246 protein-coding - hsa_circ_0086027 hsa-circ-BOP1.13 NM_015201Tchr8:145500211-145512985 expressed BOP1 23246 protein-coding - not_available hsa-circ-BOP1.2 NM_015201Tchr8:145487969-145488131 expressed BOP1 23246 protein-coding - hsa_circ_0086028 hsa-circ-BOP1.3 NM_015201Tchr8:145487209-145487900 expressed BOP1 23246 protein-coding - hsa_circ_0086022 hsa-circ-BOP1.4 NM_015201Tchr8:145487819-145487900 expressed BOP1 23246 protein-coding - hsa_circ_0086026 hsa-circ-BOP1.5 NM_015201Tchr8:145487680-145500292 expressed BOP1 23246 protein-coding - hsa_circ_0086025 hsa-circ-BOP1.6 NM_015201Tchr8:145487209-145488426 expressed BOP1 23246 protein-coding - hsa_circ_0086023 hsa-circ-BOP1.7 NM_015201Tchr8:145487969-145488426 expressed BOP1 23246 protein-coding - hsa_circ_0086029 hsa-circ-BOP1.8 NM_015201Tchr8:145487969-145515120 expressed BOP1 23246 protein-coding - hsa_circ_0086030 hsa-circ-BOP1.9 NM_015201Tchr8:145512775-145512985 expressed BOP1 23246 protein-coding - hsa_circ_0086033

DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G033487 BOP1 Homo sapiens 23246 G121195 MIR7112 Homo sapiens 102465906

DNA & RNA Element - RepTar Gene Name miRNA Begin End Profile BOP1 hsa-miR-1910 beg:5 end:24 pic:3' TCCGCCGTCCGTGTCCTGACC 5'& || || ..||.|||| &5' -----GCCTGCCTGGGGCTGG 3' BOP1 hsa-miR-378b beg:1 end:24 pic:3' AAGACGGA-GGTTCA-GGTCA 5'& |||||||| || .| | | &5' TTCTGCCTGCCTGGGGCTGG- 3' BOP1 hsa-miR-4291 beg:20 end:39 pic:3' TCGACAAGGACGACTT 5'& .| || || ||||||| &5' GGGTGGTCGTGCTGAA 3' BOP1 hsa-miR-564 beg:45 end:63 pic:3' CGGACGACTGTGGCACGGA 5'& |||| .| || |.||||. &5' GCCT-TT-ACCCTGTGCT- 3' BOP1 hsa-miR-596 beg:6 end:30 pic:3' GGGCT--CCTCGGCCCGTCCGAA 5'& ||.| ||.||.||| ||. &5' CCTGCCTGGGGCTGGGGTGGT-- 3' BOP1 hsa-miR-631 beg:11 end:31 pic:3' CGACTCCAGACCCGGTCCAGA 5'& |||.|| ||||| . |||| &5' -CTGGGG-CTGGGGT-GGTC- 3' BOP1 hsa-miR-760 beg:31 end:51 pic:3' AGGGGTGTCTGG-GTCTCGGC 5'& |.. || ||||||| &5' ---CTGAAGTCAACAGAGCC- 3' BOP1 hsa-miR-890 beg:38 end:62 pic:3' GTTGACTACGGAAA-GGTTCAT 5'& |||| || |||||| || ||. &5' CAACAGA-GCCTTTACCCTGTG 3' BOP1 hsv1-miR-H15 beg:5 end:22 pic:3' GCACCGCCGGGCCGGGCCCCGG 5'& |||. |||.|||||. &5' -------GCCT-GCCTGGGGCT 3'

DNA & RNA Element - miRcode Gene Name Type microRNA Seed Position Seed Type Total Cons% Tr Region BOP1 High_conserved miR-132/212/212-3p chr8:145487537 7-mer-m8 2 CDS, ncRNA BOP1 High_conserved miR-7/7ab chr8:145486181 7-mer-A1 13 CDS BOP1 High_conserved miR-93/93a/105/106a/291a-3p/294/295/302abcde/372/373/428/519a/520be/520acd-3p/1378/1420ac chr8:145505603 7-mer-m8 13 ncRNA BOP1 High_conserved miR-135ab/135a-5p chr8:145486556 8-mer 20 CDS BOP1 High_conserved miR-138/138ab chr8:145487039 7-mer-m8 31 CDS, ncRNA BOP1 High_conserved miR-138/138ab chr8:145488651 8-mer 7 3pUTR BOP1 High_conserved miR-145 chr8:145514972 7-mer-m8 7 CDS, 5pUTR, ncRNA BOP1 High_conserved miR-146ac/146b-5p chr8:145512902 7-mer-A1 38 CDS, 5pUTR, ncRNA BOP1 High_conserved miR-150/5127 chr8:145505597 7-mer-m8 11 ncRNA BOP1 High_conserved miR-15abc/16/16abc/195/322/424/497/1907 chr8:145487369 7-mer-m8 24 CDS, ncRNA BOP1 High_conserved miR-15abc/16/16abc/195/322/424/497/1907 chr8:145487372 7-mer-m8 24 CDS, ncRNA BOP1 High_conserved miR-17/17-5p/20ab/20b-5p/93/106ab/427/518a-3p/519d chr8:145505602 7-mer-m8 11 ncRNA BOP1 High_conserved miR-181abcd/4262 chr8:145487892 8-mer 22 CDS, ncRNA BOP1 High_conserved miR-192/215 chr8:145489194 7-mer-m8 11 ncRNA BOP1 High_conserved miR-193/193b/193a-3p chr8:145487692 7-mer-m8 31 CDS, ncRNA BOP1 High_conserved miR-193/193b/193a-3p chr8:145488731 7-mer-m8 38 3pUTR, CDS, ncRNA BOP1 High_conserved miR-193/193b/193a-3p chr8:145489186 7-mer-m8 11 ncRNA BOP1 High_conserved miR-196abc chr8:145487089 7-mer-m8 27 CDS, ncRNA BOP1 High_conserved miR-199ab-5p chr8:145497981 7-mer-m8 7 5pUTR BOP1 High_conserved miR-208ab/208ab-3p chr8:145489436 7-mer-m8 4 ncRNA BOP1 High_conserved miR-214/761/3619-5p chr8:145486911 7-mer-m8 22 CDS BOP1 High_conserved miR-214/761/3619-5p chr8:145487368 7-mer-A1 27 CDS, ncRNA BOP1 High_conserved miR-214/761/3619-5p chr8:145497960 7-mer-m8 11 5pUTR BOP1 High_conserved miR-218/218a chr8:145489819 7-mer-m8 2 ncRNA BOP1 High_conserved miR-23abc/23b-3p chr8:145489287 8-mer 33 ncRNA BOP1 High_conserved miR-23abc/23b-3p chr8:145505530 7-mer-A1 7 ncRNA BOP1 High_conserved miR-23abc/23b-3p chr8:145505647 7-mer-m8 18 ncRNA BOP1 High_conserved miR-24/24ab/24-3p chr8:145487033 7-mer-m8 29 CDS, ncRNA BOP1 High_conserved miR-24/24ab/24-3p chr8:145505624 7-mer-A1 9 ncRNA BOP1 High_conserved miR-24/24ab/24-3p chr8:145514963 7-mer-m8 9 CDS, 5pUTR, ncRNA BOP1 High_conserved miR-24/24ab/24-3p chr8:145514981 7-mer-m8 2 CDS, 5pUTR, ncRNA BOP1 High_conserved miR-29abcd chr8:145487077 7-mer-m8 24 CDS, ncRNA BOP1 High_conserved miR-31 chr8:145489676 7-mer-m8 9 ncRNA BOP1 High_conserved miR-338/338-3p chr8:145486193 7-mer-A1 22 CDS BOP1 High_conserved miR-338/338-3p chr8:145497959 7-mer-A1 7 5pUTR BOP1 High_conserved miR-34ac/34bc-5p/449abc/449c-5p chr8:145487555 7-mer-m8 16 CDS, ncRNA BOP1 High_conserved miR-34ac/34bc-5p/449abc/449c-5p chr8:145505476 7-mer-m8 2 ncRNA BOP1 High_conserved miR-425/425-5p/489 chr8:145486375 7-mer-m8 22 CDS BOP1 High_conserved miR-125a-5p/125b-5p/351/670/4319 chr8:145489176 7-mer-m8 11 ncRNA BOP1 High_conserved miR-125a-5p/125b-5p/351/670/4319 chr8:145497971 7-mer-A1 11 5pUTR BOP1 High_conserved miR-126-3p chr8:145489017 7-mer-A1 29 CDS, 5pUTR, ncRNA BOP1 Medium_conserved miR-542-3p chr8:145505661 7-mer-A1 4 ncRNA BOP1 Medium_conserved miR-544/544ab/544-3p chr8:145486258 7-mer-m8 42 CDS BOP1 Medium_conserved miR-544/544ab/544-3p chr8:145505695 7-mer-m8 16 ncRNA BOP1 Medium_conserved miR-615-3p chr8:145486391 8-mer 11 CDS BOP1 Medium_conserved miR-873 chr8:145488931 7-mer-m8 16 CDS, 5pUTR, ncRNA BOP1 Medium_conserved miR-874 chr8:145489174 7-mer-m8 9 ncRNA BOP1 Medium_conserved miR-149 chr8:145487019 7-mer-A1 36 CDS, ncRNA BOP1 Medium_conserved miR-149 chr8:145488103 7-mer-m8 7 CDS, ncRNA BOP1 Medium_conserved miR-185/882/3473/4306/4644 chr8:145487703 7-mer-m8 9 CDS, ncRNA BOP1 Medium_conserved miR-185/882/3473/4306/4644 chr8:145489847 7-mer-A1 11 ncRNA BOP1 Medium_conserved miR-197 chr8:145487518 8-mer 29 CDS, ncRNA BOP1 Medium_conserved miR-197 chr8:145505542 7-mer-A1 13 ncRNA BOP1 Medium_conserved miR-326/330/330-5p chr8:145489352 7-mer-m8 29 ncRNA BOP1 Medium_conserved miR-328a/328b-3p chr8:145489188 7-mer-m8 11 ncRNA BOP1 Medium_conserved miR-328a/328b-3p chr8:145489840 7-mer-m8 4 ncRNA BOP1 Medium_conserved miR-328a/328b-3p chr8:145512812 7-mer-m8 24 CDS, ncRNA BOP1 Medium_conserved miR-329/329ab/362-3p chr8:145487963 7-mer-m8 13 CDS, ncRNA BOP1 Medium_conserved miR-335/335-5p chr8:145497901 7-mer-m8 11 5pUTR BOP1 Medium_conserved miR-339b/339-5p/3586-5p chr8:145488792 7-mer-m8 20 3pUTR, CDS, ncRNA BOP1 Medium_conserved miR-342-3p chr8:145487544 7-mer-m8 9 CDS, ncRNA BOP1 Medium_conserved miR-342-3p chr8:145505646 7-mer-A1 16 ncRNA BOP1 Medium_conserved miR-346 chr8:145486143 7-mer-m8 11 CDS BOP1 Medium_conserved miR-370 chr8:145488109 8-mer 36 CDS, ncRNA BOP1 Medium_conserved miR-370 chr8:145488648 7-mer-m8 7 3pUTR BOP1 Medium_conserved miR-370 chr8:145489712 7-mer-m8 2 ncRNA BOP1 Medium_conserved miR-370 chr8:145489745 7-mer-m8 11 ncRNA BOP1 Medium_conserved miR-376abd/376b-3p chr8:145488346 7-mer-m8 22 CDS BOP1 Medium_conserved miR-377 chr8:145487545 7-mer-m8 9 CDS, ncRNA BOP1 Medium_conserved miR-379/1193-5p/3529 chr8:145486919 7-mer-A1 18 CDS BOP1 Medium_conserved miR-421 chr8:145487316 7-mer-m8 11 CDS, ncRNA BOP1 Medium_conserved miR-125a-3p/1554 chr8:145489132 7-mer-m8 11 ncRNA BOP1 Medium_conserved miR-485-5p/1698/1703/1962 chr8:145488380 7-mer-m8 27 CDS BOP1 Medium_conserved miR-485-5p/1698/1703/1962 chr8:145489636 7-mer-m8 0 ncRNA BOP1 Medium_conserved miR-486-5p/3107 chr8:145486551 7-mer-A1 11 CDS BOP1 Medium_conserved miR-487b chr8:145486599 7-mer-A1 4 CDS BOP1 Medium_conserved miR-487b chr8:145489015 7-mer-m8 16 CDS, 5pUTR, ncRNA BOP1 Medium_conserved miR-491-5p chr8:145487832 7-mer-m8 24 CDS, ncRNA

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score BOP1 RAID00231129 hsa-miR-296-3p miRNA MIMAT0004679 BOP1 mRNA 23246 CLASH 0.5483 BOP1 RAID01038597 hsa-miR-4267 miRNA MIMAT0016893 BOP1 mRNA 23246 Prediction 0.1828 BOP1 RAID03859874 hsa-miR-324-5p miRNA MIMAT0000761 BOP1 mRNA 23246 CLASH 0.5483 BOP1 RAID04408275 MALAT1 lncRNA 378938 BOP1 protein 23246 Microarray//RNA-seq 0.6606