DNA & RNA Element - RepTar |
Gene Name | miRNA | Begin | End | Profile |
CDRT1 | hsa-miR-449c | beg:166 | end:184 | pic:3' TGTCGGCGATCGTTA-TGTGACGGAT 5'& |||| |||||||||| &5' -----------CAATCACACTGCCTA 3' |
CDRT1 | hsa-miR-3165 | beg:199 | end:218 | pic:3' ACTCCAGTGTAACGTAGGTGGA 5'& .||| |||||||| &5' ------TACAAATAATCCACCT 3' |
CDRT1 | hsa-miR-620 | beg:148 | end:161 | pic:3' TAAAGATATAGATAGAGGTA 5'& ||| ||||||| &5' --------ATC-ATCTCCA- 3' |
CDRT1 | hsa-miR-512-3p | beg:218 | end:237 | pic:3' CTGGAGTCGATACTGTCGTGAA 5'& |||. |.||||||| &5' -----CAGTAGAGGCAGCACT- 3' |
CDRT1 | hsa-miR-571 | beg:149 | end:171 | pic:3' GAGT-GAGTCTACCGGTTGAGT 5'& ||| ||| .||||||| &5' -TCATCTCCAAC--TCAACTCA 3' |
CDRT1 | hsa-miR-3189 | beg:50 | end:65 | pic:3' GATGGGGTAGTCTGGGTTCCC 5'& ||| ||||||| &5' --------TCACCCCCAAGG- 3' |
CDRT1 | hsa-miR-4292 | beg:22 | end:38 | pic:3' GGTTC-CGGCCGGGTCCCC 5'& ||| || ||||||| &5' --AAGAGC---CCCAGGG- 3' |
CDRT1 | hsa-miR-371-3p | beg:176 | end:195 | pic:3' TGTGAGTTTTCTACCGCCGTGAA 5'& .| .|||| ||||||| &5' --GCCTAAAAT----CGGCACT- 3' |
CDRT1 | hsa-miR-665 | beg:69 | end:84 | pic:3' TCCCCGGAGTCGGAGGACCA 5'& ||| ||||||| &5' ---GGCAA----CTCCTGG- 3' |
CDRT1 | ebv-miR-BART12 | beg:0 | end:17 | pic:3' TTGGTGTGGTTTGTGGTGTCCT 5'& || || .| .|||||| &5' -----CAGCAGGTA-TACAGGA 3' |
CDRT1 | ebv-miR-BART17-3p | beg:0 | end:14 | pic:3' TGATTCCCCTGTGGTCCGTATGT 5'& || ||||.||||| &5' ----------CAGCAGGTATACA 3' |
CDRT1 | ebv-miR-BART17-5p | beg:253 | end:272 | pic:3' GAACATACGGACGCAGGAGAAT 5'& |||| | ||||||| &5' ----TATGGG-GAATCCTCTT- 3' |
CDRT1 | ebv-miR-BART21-3p | beg:93 | end:117 | pic:3' TTTGTGGTCAC-----CC-GTGTTGATC 5'& |||| || ||||.|||| &5' -------AGTGGCAAAGGACACAGCTAG 3' |
CDRT1 | ebv-miR-BART3star | beg:84 | end:107 | pic:3' TCGTGTTGTG-ATTGTGATCCA 5'& ||||||||| |..|| ||| &5' AGCACAACAAGTGGCAA-AGG- 3' |
CDRT1 | ebv-miR-BART9star | beg:208 | end:226 | pic:3' CAAAGGTTAAGTCCCAGGTCAT 5'& |||| ||||||| &5' ---TCCACCTA----TCCAGTA 3' |
CDRT1 | hsa-miR-4283 | beg:19 | end:35 | pic:3' TTTGAGCGACTCGGGGT 5'& |.| |||||||| &5' ----TTGAAGAGCCCCA 3' |
CDRT1 | hsa-miR-4256 | beg:52 | end:70 | pic:3' TGGAAGTAGTCCAGTCTA 5'& ||| || |||||||| &5' ACCCCCA--AGGTCAGA- 3' |
CDRT1 | hcmv-miR-US25-2-3p | beg:32 | end:52 | pic:3' GGCGCCCTCGA-GAGGTTCACCTA 5'& |.||| || ..||||||| &5' ------GGGCTCCTGTGAGTGGAT 3' |
CDRT1 | hiv1-miR-N367 | beg:47 | end:69 | pic:3' AACTTCGTGGTAGGTTTCCAGTCA 5'& || |||| || |||||||| &5' --GATTCACCC-CC-AAGGTCAG- 3' |
CDRT1 | hsa-miR-103-2star | beg:223 | end:246 | pic:3' GTTCCGTCGTGACATTTCTTCGA 5'& .||||||||||| .||| &5' -GAGGCAGCACTGATCT--GGCT 3' |
CDRT1 | hsa-miR-1233 | beg:20 | end:41 | pic:3' GACGCCCTCCT-GTCCCGAGT 5'& || ||| |||||||| &5' -TGAA-GAGCCCCAGGGCTC- 3' |
CDRT1 | hsa-miR-1250 | beg:222 | end:238 | pic:3' TTTCCGGTGTAGGTCGTGGCA 5'& |.|||| |||||.| &5' AGAGGC-------AGCACTG- 3' |
CDRT1 | hsa-miR-1250 | beg:176 | end:196 | pic:3' TTTCCGGTG-TAGGTCGTGGCA 5'& ||| | .|.||||.| &5' ----GCCTAAAATCGGCACTG- 3' |
CDRT1 | hsa-miR-125b-1star | beg:25 | end:45 | pic:3' TCGAGGGTTCTCGGATTGGGCA 5'& ||| ||||.| ||. ||.|| &5' AGC-CCCAGG-GCT---CCTGT 3' |
CDRT1 | hsa-miR-1261 | beg:209 | end:223 | pic:3' TTCGGTTTCGGAATAGGTA 5'& ||| || |||||| &5' ---CCA---CC-TATCCA- 3' |
CDRT1 | hsa-miR-1270 | beg:139 | end:161 | pic:3' TGTGTCGAGAAGGTATAGAGGTC 5'& ||. | . .|| |||||| &5' ACGTGGAGTGATCA--TCTCCA- 3' |
CDRT1 | hsa-miR-1282 | beg:118 | end:141 | pic:3' TTCG-TCTTTTTCCGTTTGCT 5'& ..|| .||||||||||.| || &5' GGGCTGGAAAAAGGCAGA-GA 3' |
CDRT1 | hsa-miR-1289 | beg:20 | end:42 | pic:3' TTTTACGTCTAAGGA-CCTGAGGT 5'& || ||| || ||.|||| &5' ----TGAAGAGCCCCAGGGCTCC- 3' |
CDRT1 | hsa-miR-1322 | beg:218 | end:241 | pic:3' GTCGTAGTCGTCGT-AGTAG 5'& |||.| .|||||| | ||| &5' CAGTAGAGGCAGCACTGATC 3' |
CDRT1 | hsa-miR-143 | beg:141 | end:159 | pic:3' CTCGATGTCACGAAGTAGAGT 5'& |. |||| ||||||| &5' ----TGGAGTGA-TCATCTC- 3' |
CDRT1 | hsa-miR-148a | beg:220 | end:239 | pic:3' TGTTTCAAGACATCA----CGTGACT 5'& |||| ||||||| &5' ----------GTAGAGGCAGCACTGA 3' |
CDRT1 | hsa-miR-148a | beg:187 | end:197 | pic:3' TGTTTCAAGACATCACGTGACT 5'& ||||||| &5' ---------------GCACTGA 3' |
CDRT1 | hsa-miR-148b | beg:187 | end:197 | pic:3' TGTTTCAAGACACTACGTGACT 5'& ||||||| &5' ---------------GCACTGA 3' |
CDRT1 | hsa-miR-148b | beg:229 | end:239 | pic:3' TGTTTCAAGACACTACGTGACT 5'& ||||||| &5' ---------------GCACTGA 3' |
CDRT1 | hsa-miR-152 | beg:184 | end:197 | pic:3' GGTTCAAGACAGTACGTGACT 5'& ||. ||||||| &5' ----------TCG-GCACTGA 3' |
CDRT1 | hsa-miR-152 | beg:217 | end:239 | pic:3' GGTTCAAGACAGTACGTGACT 5'& || ||| || ||||||| &5' CC-AGTAGAGGCA-GCACTGA 3' |
CDRT1 | hsa-miR-16-1star | beg:0 | end:25 | pic:3' AGTCGTC---GTGTCAA-TTATGACC 5'& |||||| .|||| |||..|| &5' -CAGCAGGTATACAGGAAAATGTTG- 3' |
CDRT1 | hsa-miR-16-2star | beg:7 | end:25 | pic:3' ATTTCGTCGTGTCA--TTATAACC 5'& .|||| |||.||| &5' --------TACAGGAAAATGTTG- 3' |
CDRT1 | hsa-miR-196a | beg:164 | end:184 | pic:3' GGGTTGTTGTACTTTGATGGAT 5'& |.|||. || |||.|||| &5' CTCAATCAC-----ACTGCCTA 3' |
CDRT1 | hsa-miR-196b | beg:164 | end:184 | pic:3' GGGTTGTTGTCCTTTGATGGAT 5'& |.|||. || |||.|||| &5' CTCAATCAC-----ACTGCCTA 3' |
CDRT1 | hsa-miR-2113 | beg:186 | end:209 | pic:3' CACTGTCTCGG-TTCGTGTTTA 5'& |.|| | |||.|||||| &5' --GGCACTGACAAAGTACAAAT 3' |
CDRT1 | hsa-miR-2117 | beg:121 | end:143 | pic:3' GACAGGAA-CCGTTTCTCTTGT 5'& ||| ||| ||||||| &5' CTGGAAAAAGGC--AGAGAAC- 3' |
CDRT1 | hsa-miR-218 | beg:78 | end:94 | pic:3' TGTACCAATCTAGTTCGTGTT 5'& |.|| | ||||||| &5' -------TGGAAC-AGCACAA 3' |
CDRT1 | hsa-miR-219-1-3p | beg:154 | end:170 | pic:3' GCCCTGCAGGTCTGAGTTGAGA 5'& |||| ||||||||| &5' -------TCCA-ACTCAACTC- 3' |
CDRT1 | hsa-miR-220c | beg:37 | end:46 | pic:3' TCAGAAGTGTTGTCGGGACACA 5'& .|||||| &5' --------------TCCTGTG- 3' |
CDRT1 | hsa-miR-223 | beg:186 | end:199 | pic:3' ACCCCATAAACTGTTTGACTGT 5'& |.| ||||||| &5' ----------GGC--ACTGACA 3' |
CDRT1 | hsa-miR-2355 | beg:246 | end:264 | pic:3' AACAGGTAACATAGACCCCTA 5'& ||| || |||||| &5' ---TCC--TGGATATGGGGA- 3' |
CDRT1 | hsa-miR-26a-2star | beg:57 | end:74 | pic:3' CTTTGTTCATTAGTTCTTATCC 5'& |||| .|| |||||.| &5' ----CAAG--GTC-AGAATGG- 3' |
CDRT1 | hsa-miR-302cstar | beg:3 | end:27 | pic:3' GTCGTCCATGGGGG----TACAATTT 5'& |||||| | |||||.|| &5' ---CAGGTATACAGGAAAATGTTGAA 3' |
CDRT1 | hsa-miR-302dstar | beg:9 | end:27 | pic:3' CGTTCACGGAGGTACAATTTCA 5'& ||.| |||||.||| &5' -CAGGAAA----ATGTTGAAG- 3' |
CDRT1 | hsa-miR-302f | beg:136 | end:153 | pic:3' TTTGTACCTTCGTTAAT 5'& .|||.||| || || &5' GAACGTGG-AGTGAT-- 3' |
CDRT1 | hsa-miR-3172 | beg:11 | end:35 | pic:3' ATTCCTG--ACG---TTTTGGGGT 5'& |||| ||. |.|.||||| &5' --AGGAAAATGTTGAAGAGCCCCA 3' |
CDRT1 | hsa-miR-324-3p | beg:29 | end:51 | pic:3' GGTCGTCGTGGAC-CCCGTCA 5'& |||| .|| |||| | | | &5' CCAG-GGCTCCTGTGAGTGG- 3' |
CDRT1 | hsa-miR-326 | beg:21 | end:38 | pic:3' GACCTCCTTCCC-GGGTCTCC 5'& |||| | |||||.| &5' ------GAAGAGCCCCAGGG- 3' |
CDRT1 | hsa-miR-335star | beg:9 | end:27 | pic:3' CCAGTCCTCGTTATTACTTTTT 5'& ||||| |||. ||||.| &5' ---CAGGAA-AATGTTGAAGA- 3' |
CDRT1 | hsa-miR-34a | beg:161 | end:182 | pic:3' TGTTGGTCGATTCTGTGACGGT 5'& ||||. |||||||| &5' -CAACTCAATC--ACACTGCC- 3' |
CDRT1 | hsa-miR-34astar | beg:229 | end:248 | pic:3' TCCCGTCATATGAACGACTAAC 5'& ||| || ||||||| &5' ---GCACTGATCTGGCTGATT- 3' |
CDRT1 | hsa-miR-34bstar | beg:160 | end:184 | pic:3' GTTAGTCGA-TTACTGTGACGGAT 5'& ||| || ||| |||||||||| &5' ---TCAACTCAATCACACTGCCTA 3' |
CDRT1 | hsa-miR-34c-5p | beg:160 | end:183 | pic:3' CGTTAGTCGA-TTGATGTGACGGA 5'& ||| || ||. ||||||||| &5' ----TCAACTCAATCACACTGCCT 3' |
CDRT1 | hsa-miR-363star | beg:198 | end:218 | pic:3' TTTAACGTAGCAC-TAGGTGGGC 5'& |.| |||||||. &5' -----GTACAAATAATCCACCT- 3' |
CDRT1 | hsa-miR-4253 | beg:245 | end:260 | pic:3' TGGGGGACCTGTACGGGA 5'& ..||||||.||| &5' --TTCCTGGATATG---- 3' |
CDRT1 | hsa-miR-4267 | beg:109 | end:129 | pic:3' CACGGTG---GCTCGACCT 5'& ||.| ||.|||||| &5' --GCTAGCAACGGGCTGGA 3' |
CDRT1 | hsa-miR-4276 | beg:223 | end:239 | pic:3' CGTGTACTCA---GTGACTC 5'& ||| |||||| &5' ------GAGGCAGCACTGA- 3' |
CDRT1 | hsa-miR-4302 | beg:159 | end:179 | pic:3' GAGC-GACTCGGTGTGACC 5'& ||| || | ||||||| &5' CTCAACTCAATCACACTG- 3' |
CDRT1 | hsa-miR-4307 | beg:123 | end:145 | pic:3' CCTTTGTCC-TTTTTTGTAA 5'& ||||| ||| |.|.|||.| &5' GGAAAAAGGCAGAGAACGT- 3' |
CDRT1 | hsa-miR-4309 | beg:258 | end:274 | pic:3' ACCTTAGGATCTGAGGTC 5'& |||||||| ||..| &5' -GGAATCCT---CTTTA- 3' |
CDRT1 | hsa-miR-4320 | beg:250 | end:269 | pic:3' TCCTTCGATGTCTTAGGG 5'& ||| |. .||||||. &5' -GGATA-TGGGGAATCCT 3' |
CDRT1 | hsa-miR-449a | beg:160 | end:182 | pic:3' TGGTCGATTGTTA-TGTGACGGT 5'& .|| || |||| |||||||| &5' -TCAACT--CAATCACACTGCC- 3' |
CDRT1 | hsa-miR-449b | beg:160 | end:183 | pic:3' CGGTCGATTGTTA-TGTGACGGA 5'& .|| || |||| ||||||||| &5' -TCAACT--CAATCACACTGCCT 3' |
CDRT1 | hsa-miR-449cstar | beg:101 | end:120 | pic:3' TGTCTCTCCTCACGTTGATCGTT 5'& |||| ||.||||||| &5' ------AGGACA-CAGCTAGCAA 3' |
CDRT1 | hsa-miR-483-3p | beg:129 | end:152 | pic:3' TTCTGCCCTCCT-CTCCTCACT 5'& |||.| ||| | ||||||| &5' AAGGCA-GAGAACGTGGAGTGA 3' |
CDRT1 | hsa-miR-511 | beg:94 | end:111 | pic:3' ACTGACGTCTCGTTTTCTGTG 5'& |. .|||||.||||| &5' -----GT--GGCAAAGGACAC 3' |
CDRT1 | hsa-miR-513a-5p | beg:36 | end:48 | pic:3' TACTGTGGAGGGACACTT 5'& || |||||||. &5' -------CT-CCTGTGAG 3' |
CDRT1 | hsa-miR-516a-3p | beg:34 | end:55 | pic:3' TG-GGAGACTTTCCTTCGT 5'& .| ||| |||. ||| || &5' GCTCCTGTGAGTGGATTCA 3' |
CDRT1 | hsa-miR-516bstar | beg:34 | end:55 | pic:3' TG-GGAGACTTTCCTTCGT 5'& .| ||| |||. ||| || &5' GCTCCTGTGAGTGGATTCA 3' |
CDRT1 | hsa-miR-519estar | beg:246 | end:265 | pic:3' CTTTCACGAGGGAAA--ACCTCTT 5'& .|||. |||.||| &5' -------TTCCTGGATATGGGGAA 3' |
CDRT1 | hsa-miR-581 | beg:0 | end:17 | pic:3' TGACTAGATC-TCT-TGTGTTCT 5'& || ||. |.|||.|| &5' --------AGCAGGTATACAGGA 3' |
CDRT1 | hsa-miR-599 | beg:95 | end:114 | pic:3' CAAACTATTTGACTGTGTTG 5'& || ||| ||||||.| &5' ---TGGCAAAG-GACACAGC 3' |
CDRT1 | hsa-miR-615-5p | beg:24 | end:43 | pic:3' CTAGGCTCGTGGCCCCTGGGGG 5'& |||| || ||.|.||. &5' -----GAGC-CCCAGGGCTCCT 3' |
CDRT1 | hsa-miR-626 | beg:224 | end:234 | pic:3' TTCTGTAAAAGTCTGTCGA 5'& ||.|||| &5' -----------AGGCAGC- 3' |
CDRT1 | hsa-miR-665 | beg:239 | end:255 | pic:3' TCCCCGGAGTCGGAGGACCA 5'& |||. .|||||| &5' ---GGCTGA---TTCCTGG- 3' |
CDRT1 | hsa-miR-675star | beg:3 | end:15 | pic:3' ACTCGCCACTCCCGTATGTC 5'& ||.|||||| &5' -----------GGTATACAG 3' |
CDRT1 | hsa-miR-708 | beg:28 | end:43 | pic:3' GGGTCGATCTAACATTCGAGGAA 5'& ||||| .|||||| &5' CCCAG----------GGCTCCT- 3' |
CDRT1 | hsa-miR-876-5p | beg:239 | end:268 | pic:3' ACC-ACTAAG----TGT-TTCTTTAGGT 5'& || |||||| |.| ..|.||||| &5' -GGCTGATTCCTGGATATGGGGAATCC- 3' |
CDRT1 | hsa-miR-934 | beg:32 | end:53 | pic:3' GGTCACAGAGGTCA-TCATCTGT 5'& ||| |||| || |||.||. &5' -CAGGG-CTCCTGTGAGTGGAT- 3' |
CDRT1 | kshv-miR-K12-10a | beg:217 | end:238 | pic:3' CGGTGAGCCCCCCTGTTGTGAT 5'& ||| | | |.||.||||. &5' -CCAGTA---GAGGCAGCACTG 3' |
CDRT1 | kshv-miR-K12-1 | beg:26 | end:47 | pic:3' CGAATGTGGGTCAA-AGGACATTA 5'& .| ||||| ||||||.| &5' ----GC-CCCAGGGCTCCTGTGA- 3' |