DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0004541 mmu-miR-188-3p 107986 Ddb2 acguuugggACGUACACCCUc || :||||||| ------agaUG-GUGUGGGAc 2 13 1 14 [mm9:2:91052091-91052104:-] 0.5460 142 7 -13.18 -0.2932 MIMAT0004625 mmu-miR-16* 107986 Ddb2 aguCGUCGUGUCAGUUAUGACc |::| |||| |||||||| gguGUGGGACAG-CAAUACUGg 2 20 5 25 [mm9:2:91052080-91052100:-] 0.5460 165 7 -23.94 -0.2860 MIMAT0004790 mmu-miR-503* 107986 Ddb2 gguCCGUCACCU-UUGUUAUGAg ||:: ||| |:||||||| gauGGUGUGGGACAGCAAUACUg 2 20 2 24 [mm9:2:91052081-91052103:-] 0.5460 158 7 -19.78 -0.2931 MIMAT0003375 mmu-miR-302c* 107986 Ddb2 cguCCAUUGGGGUACAAUU-UCg || |:|: : |||||| || aguGGCAGCUGUUUGUUAAUAGg 2 20 56 78 [mm9:2:91052027-91052049:-] 0.5555 123 0 -11.09 -0.5190 MIMAT0003464 mmu-miR-686 107986 Ddb2 agaagUGGCAGACCCU-UCGUUa |: || ||||| ||||| ---agAUGGUGUGGGACAGCAAu 2 18 1 20 [mm9:2:91052085-91052104:-] 0.5460 129 0 -19.07 -0.3439 MIMAT0004837 mmu-miR-615-5p 107986 Ddb2 cuaggcUCG-UGGCCCCUGGGGg ||| |: ||||||| ugggacAGCAAUACUGGACCCCa 2 17 9 31 [mm9:2:91052074-91052096:-] 0.5460 143 7 -22.36 -0.8049 MIMAT0009407 mmu-miR-1942 107986 Ddb2 guugGUCUA--CUUCUGU-AGACu ||||| ||| ||| |||| cccaCAGAUGGGAACACAUUCUGu 2 18 28 51 [mm9:2:91052054-91052077:-] 0.5460 128 0 -19.62 -0.2116 MIMAT0000149 mmu-miR-137 107986 Ddb2 gaUGCGCAUAAGAAUUCGUUAUu |:| ||:| ||||||| agAUG-GUGUGGGACAGCAAUAc 2 22 1 22 [mm9:2:91052083-91052104:-] 0.5460 143 7 -12.00 -0.3405 MIMAT0000531 mmu-miR-22 107986 Ddb2 ugucAAGA-AGU--UGACCGUCGAa |||| | | | |||||||| cacaUUCUGUGAGGAGUGGCAGCUg 2 19 42 66 [mm9:2:91052039-91052063:-] 0.5460 152 7 -18.68 -0.4729 MIMAT0003456 mmu-miR-495 107986 Ddb2 uuCUUCA-CGUGGUACAAACAAa |:||| ||| | |||||||| gaGGAGUGGCAGC-UGUUUGUUa 2 21 52 73 [mm9:2:91052032-91052053:-] 0.5555 165 7 -21.23 -0.6904 MIMAT0005850 mmu-miR-1192 107986 Ddb2 uuaaACCAGACAAACAAACAAa ||| | | |||||||| ggagUGG-CAG-CUGUUUGUUa 2 19 54 73 [mm9:2:91052032-91052051:-] 0.5555 146 7 -14.19 -0.6941

DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G069576 Ddb2 Mus musculus 107986

DNA & RNA Element - RepTar Gene Name miRNA Begin End Profile Ddb2 mmu-miR-1198 beg:29 end:47 pic:3' GGTTCGGTCGGTCCTTGTGTAT 5'& ||| .||||||||| &5' ------CAGATGGGAACACAT- 3' Ddb2 mmu-miR-137 beg:3 end:22 pic:3' GATGCGCATAAGAATTCGTTATT 5'& |.||. ||||||| &5' ----GTGTGGGAC--AGCAATA- 3' Ddb2 mmu-miR-483star beg:49 end:59 pic:3' TTCTGCCCTCCCCTCCTCACT 5'& |||||||| &5' ------------GAGGAGTG- 3' Ddb2 mmu-miR-615-5p beg:12 end:31 pic:3' CTAGGCTCGTGGCC-CCTGGGGG 5'& | |||| ||||||| &5' ----C-AGCAATACTGGACCCC- 3' Ddb2 mmu-miR-122 beg:39 end:50 pic:3' GTTTGTGGTAACAGTGTGAGGT 5'& ||||.||. &5' -------------CACATTCT- 3' Ddb2 mmu-miR-16star beg:5 end:26 pic:3' AGTCGTCGTGTCAGTTATGACC 5'& | | |||| ||||||||| &5' ---GTGGGACAG-CAATACTGG 3' Ddb2 mmu-miR-199bstar beg:8 end:26 pic:3' CTTGTCCATCAGATTTGTGACCC 5'& |.|||| ||.||||| &5' GGACAGC-------AATACTGG- 3' Ddb2 mmu-miR-22 beg:44 end:66 pic:3' TGTCAAGAAG---TTGACCGTCGAA 5'& |||| .| |||||||| &5' ----TTCTGTGAGGAGTGGCAGCT- 3' Ddb2 mmu-miR-696 beg:25 end:45 pic:3' GGGTGTC-GTTCGTGTGCG 5'& ||||||| ...| |||| &5' CCCACAGATGGGAACAC-- 3'

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Ddb2 RAID00029521 mmu-miR-182-5p miRNA MIMAT0000211 Ddb2 mRNA 107986 Prediction 0.1828 Ddb2 RAID00124891 mmu-miR-1251-5p miRNA MIMAT0014824 Ddb2 mRNA 107986 Prediction 0.1828 Ddb2 RAID00472519 mmu-miR-137-3p miRNA MIMAT0000149 Ddb2 mRNA 107986 Prediction 0.1828 Ddb2 RAID00873144 mmu-miR-1291 miRNA MIMAT0031397 Ddb2 mRNA 107986 Prediction 0.1828 Ddb2 RAID00905457 mmu-miR-1192 miRNA MIMAT0005850 Ddb2 mRNA 107986 Prediction 0.1828 Ddb2 RAID00932195 mmu-miR-7669-3p miRNA MIMAT0029845 Ddb2 mRNA 107986 Prediction 0.1828 Ddb2 RAID01093455 mmu-miR-96-5p miRNA MIMAT0000541 Ddb2 mRNA 107986 Prediction 0.1828 Ddb2 RAID01338243 mmu-miR-5133 miRNA MIMAT0020644 Ddb2 mRNA 107986 Prediction 0.1828 Ddb2 RAID01609533 mmu-miR-3057-3p miRNA MIMAT0014823 Ddb2 mRNA 107986 Prediction 0.1828 Ddb2 RAID01664447 mmu-miR-188-3p miRNA MIMAT0004541 Ddb2 mRNA 107986 Prediction 0.1828 Ddb2 RAID01672586 mmu-miR-495-3p miRNA MIMAT0003456 Ddb2 mRNA 107986 Prediction 0.1828 Ddb2 RAID01922556 mmu-miR-22-3p miRNA MIMAT0000531 Ddb2 mRNA 107986 Prediction 0.1828 Ddb2 RAID02661055 mmu-miR-6367 miRNA MIMAT0025111 Ddb2 mRNA 107986 Prediction 0.1828 Ddb2 RAID02839492 mmu-miR-325-3p miRNA MIMAT0004640 Ddb2 mRNA 107986 Prediction 0.1828 Ddb2 RAID03061474 mmu-miR-7017-3p miRNA MIMAT0027939 Ddb2 mRNA 107986 Prediction 0.1828 Ddb2 RAID03302787 mmu-mir-325 miRNA MI0000597 Ddb2 mRNA 107986 Prediction 0.1828 Ddb2 RAID03319863 mmu-miR-3099-3p miRNA MIMAT0014816 Ddb2 mRNA 107986 Prediction 0.1828 Ddb2 RAID03554487 mmu-miR-7688-5p miRNA MIMAT0029906 Ddb2 mRNA 107986 Prediction 0.1828 Ddb2 RAID03620195 mmu-miR-652-5p miRNA MIMAT0017260 Ddb2 mRNA 107986 Prediction 0.1828 Ddb2 RAID03914294 mmu-miR-615-5p miRNA MIMAT0004837 Ddb2 mRNA 107986 Prediction 0.1828 Ddb2 RAID03926955 mmu-miR-186-3p miRNA MIMAT0004540 Ddb2 mRNA 107986 Prediction 0.1828