iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

PPI - IID
Symbol 1	Symbol 2	PMID	DBs	Evidence Type	Adipose Tissue	Adrenal Gland	Amygdala	Bone	Bone Marrow	Brain	Dorsal Root Ganglia	Eye	Heart	Hindgut	Hypothalamus	Kidney	Liver	Lung	Lymph Nodes	Mammary Gland	Midgut	Neurons	Ovary	Pancreas	Pituitary Gland	Placenta	Prostate	Salivary Gland	Skeletal Muscle	Small Intestine	Spleen	Stomach	Testes	Uterus
App	Sh3gl1	22036569	intact	exp	GP	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G
Sh3gl1	Park2	20064468	biogrid	exp											G										G			G					G
Fau	Sh3gl1	19796172	mint,intact	exp	GP	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G
Ywhae	Sh3gl1	16615898	intact	exp	GP	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G
Htt	Sh3gl1		i2d	exp	GP	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G
Crebbp	Sh3gl1	15752756	biogrid,i2d	exp, ortho	GP	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G
Sh3gl1	Pdcd6ip	12034747	mint,intact	exp, ortho	GP	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G
Dnm1	Sh3gl1	22167186	biogrid	exp, ortho	GP	G	G			G	G	G		G	G			G		G	G	G	G	G	G		G	G	G	G		G	G	G
Ptk2	Sh3gl1		i2d	exp, ortho	GP	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G
Sh3gl1	Blnk	15102471	mint,intact	exp, ortho	G		G	G	G	G		G	G	G		G		G	G	G	G	G	G			G	G	G	G	G	G	G		G
Pik3r1	Sh3gl1	15102471	mint,intact	exp, ortho	GP	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G
Pik3r2	Sh3gl1	15102471	mint,intact	exp, ortho	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G
Aarsd1	Sh3gl1			ortho	GP	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G
Sh3gl1	Crtap			ortho	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G
Sh3gl1	Sept8			ortho	GP	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G
Sh3gl1	Fam102a			ortho	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G
Bag1	Sh3gl1			ortho	GP	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G
Sh3gl1	Lap3			ortho	GP	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G
Sh3gl1	Dnm1l			ortho	GP	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G
Khdrbs1	Sh3gl1			ortho	GP	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G
Sh3gl1	Sh3kbp1			ortho	GP	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G
Sh3gl1	Actr3			ortho	GP	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G
Sh3gl1	Nif3l1			ortho	GP	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G
Sh3gl1	Rb1cc1			ortho	GP	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G
Sh3gl1	Gtf2e1			ortho
Arpc4	Sh3gl1			ortho	GP	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G
Sh3gl1	Mal2			ortho	P		G			G	G	G		G	G	G	G	G		G	G	G	G	G	G		G	G		G		G		G
Actr2	Sh3gl1			ortho	GP	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G
Sh3gl1	Sh2d4a			ortho	P
Calu	Sh3gl1			ortho	GP	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G
Dpysl4	Sh3gl1			ortho			G			G	G	G	G		G							G	G										G	G
Sh3gl1	Sh3gl3			ortho	G	G	G			G	G				G				G			G	G			G							G	G
Dnm2	Sh3gl1			ortho	GP	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G
Sh3gl1	Synj1			ortho	P
Sorbs2	Sh3gl1			ortho	P
Calr	Sh3gl1			ortho	GP	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G
Sh3gl1	Gtf2f2			ortho	GP	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G
Sh3gl1	Thg1l			ortho
Sh3gl1	Fubp1			ortho	GP	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G
Sh3gl1	Pfdn1			ortho	GP	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G
Sh3gl1	Dnm3			ortho	P	G	G			G	G	G	G		G	G						G		G	G			G	G				G	G
Sh3gl1	Trmt10a			ortho	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G
Sh3gl1	Arpc5			ortho	GP	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G
Sh3gl1	Dppa4			ortho
Sh3gl1	Kbp			ortho	P
Sh3gl1	Itsn2			ortho	GP	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G
Sh3gl1	Sh3d19			ortho	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G
Sh3gl1	Sh3glb2			ortho	GP	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G
Sh3gl1	Ccdc101			ortho	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G
Ubc	Sh3gl1			ortho	GP	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G
Sh3gl1	Sh3gl1			ortho	GP	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G
Sh3gl1	Rpa1			ortho	GP	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G
Sh3gl1	Mta1			ortho	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G
Sh3gl1	Pfdn5			ortho	GP	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G
Sh3gl1	Tprkb			ortho	GP	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G
Sh3gl1	Synj2			ortho	GP		G			G	G	G		G	G				G	G	G	G	G	G			G	G	G			G	G	G
Lrrk2	Sh3gl1			ortho	GP	G	G	G	G	G	G	G	G		G	G		G	G	G		G	G	G	G				G		G		G
Prkaca	Sh3gl1			ortho	GP	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G
Nsun2	Sh3gl1			ortho	GP	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G
Sh3gl1	B3gat1			ortho			G			G					G							G
Axin1	Sh3gl1			ortho	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G
Pml	Sh3gl1			ortho	GP	G		G	G					G		G	G	G	G	G	G		G	G	G	G	G	G		G	G	G		G
Sh3gl1	Srgap3			ortho		G	G	G	G	G	G	G		G	G	G			G	G		G	G	G	G	G		G			G	G	G	G
Sh3gl1	Sh3gl2			ortho	GP	G	G		G	G	G	G	G	G	G	G					G	G	G	G	G		G			G		G	G	G
Ywhaz	Sh3gl1			ortho	GP	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G
Sh3gl1	Vps37c			ortho	GP	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G
Ptpro	Sh3gl1			ortho	G		G	G	G	G	G	G	G	G	G	G			G			G			G			G			G
Vim	Sh3gl1			ortho	GP	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G
Sh3gl1	Sh3glb1			ortho	GP	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G
Sh3gl1	Arpc1a			ortho	GP	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G
Sh3gl1	Arpc5l			ortho	GP	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G
Sh3gl1	Arpc2			ortho	GP	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G
Gpkow	Sh3gl1			ortho
Aurka	Sh3gl1			ortho				G	G					G					G	G	G		G	G					G	G	G	G	G	G
Sh3gl1	Ttc1			ortho	GP	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G
Sh3gl1	Prmt1			ortho	GP	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G

PPI - PINA
Gene A	Gene B	Method	Publications	Species A	Species B	Interaction Type	Source Database	Interaction Identidiers	Experimental Role(s) Interactor A	Experimental Role(s) Interactor B
Fau	Sh3gl1	MI:0006(anti bait coimmunoprecipitation)\|MI:0006(anti bait coimmunoprecipitation)\|MI:0006(anti bait coimmunoprecipitation)\|MI:0006(anti bait coimmunoprecipitation)\|MI:0006(anti bait coimmunoprecipitation)\|MI:0006(anti bait coimmunoprecipitation)	19796172	taxid:10090(Mus musculus)	taxid:10090(Mus musculus)	MI:0915(physical association)\|MI:0915(physical association)\|MI:0915(physical association)\|MI:0915(physical association)\|MI:0915(physical association)\|MI:0915(physical association)	(intact)\|(intact)\|MI:0471(mint)\|(intact)\|MI:0471(mint)\|MI:0471(mint)	UniProt_171229\|UniProt_171231\|MINT_73640\|UniProt_171230\|MINT_73642\|MINT_73641	bait\|bait\|bait\|bait\|bait\|bait	prey\|prey\|prey\|prey\|prey\|prey
Pik3r2	Sh3gl1	MI:0018(two hybrid)	15102471	taxid:10090(Mus musculus)	taxid:10090(Mus musculus)	MI:0915(physical association)	(intact)	UniProt_164762	bait	prey
Dnm1	Sh3gl1	MI:0004(affinity chromatography technology)	22167186	taxid:10090(Mus musculus)	taxid:10090(Mus musculus)	MI:0915(physical association)	(biogrid)	BIOGRID_320693	bait	prey
Pik3r1	Sh3gl1	MI:0018(two hybrid)	15102471	taxid:10090(Mus musculus)	taxid:10090(Mus musculus)	MI:0915(physical association)	(intact)	UniProt_164756	bait	prey
Sh3gl1	Pdcd6ip	MI:0027(cosedimentation)\|MI:0018(two hybrid)\|MI:0018(two hybrid)	12034747,16615898	taxid:10090(Mus musculus)	taxid:10090(Mus musculus)	MI:0403(colocalization)\|MI:0915(physical association)\|MI:0915(physical association)	(intact)\|(intact)\|(intact)	UniProt_167134\|UniProt_160918\|UniProt_160920	neutral component\|prey\|prey	neutral component\|bait\|bait
Sh3gl1	Blnk	MI:0018(two hybrid)	15102471	taxid:10090(Mus musculus)	taxid:10090(Mus musculus)	MI:0915(physical association)	(intact)	UniProt_162830	prey	bait
Crebbp	Sh3gl1	MI:0018(two hybrid)\|MI:0018(two hybrid)	15752756	taxid:10090(Mus musculus)	taxid:10090(Mus musculus)	MI:0407(direct interaction)\|MI:0407(direct interaction)	(biogrid)\|(biogrid)	BIOGRID_320337\|BIOGRID_320327	bait\|bait	prey\|prey

PPI - HINT
Gene A	Gene B	PMID	Method	Quality
PIK3R2	SH3GL1	15102471	0018	LC
SRC	SH3GL1	16054026	0045	LC
APP	SH3GL1	22036569	0029	LC
PIK3R1	SH3GL1	15102471	0018	LC
PTK2	SH3GL1	16054026,16054026	0004,0019	LC
CREBBP	SH3GL1	15752756,15752756,15752756	0096,0004,0018	LC
YWHAE	SH3GL1	16615898	0027	LC
SH3GL1	BLNK	15102471	0018	LC
SH3GL1	PDCD6IP	12034747,12034747	0019,0018	LC
PTK2	SH3GL1	16054026,16054026	0004,0019	LC
FAU	SH3GL1	19796172	0006	LC
DNM1	SH3GL1	22167186	0004	LC
HTT	SH3GL1	12456676	0004	LC
CREBBP	SH3GL1	15752756,15752756,15752756	0096,0004,0018	LC
SH3GL1	PARK2	20064468	0004	LC

PPI - Mentha
Protein A	Protein B	Gene A	Gene B	Score	PMID
Q62419	P62259	SH3GL1	YWHAE	0.081	16615898
Q9WVS6	Q62419	PARK2	SH3GL1	0.21	20064468
Q9QUN3	Q62419	BLNK	SH3GL1	0.183	15102471
Q62419	O08908	SH3GL1	PIK3R2	0.183	15102471
Q62419	P12023	SH3GL1	APP	0.21	22036569
Q9WU78	Q62419	PDCD6IP	SH3GL1	0.454	12034747
Q62419	P62158	SH3GL1	CALM3	0.236	16512683
Q62419	P26450	SH3GL1	PIK3R1	0.183	15102471
Q62419	P35545	SH3GL1	FAU	0.376	19796172
Q62419	P39053	SH3GL1	DNM1	0.21	22167186