DNA & RNA Element - AREsite Gene Name Motif CDS Area ARE Area Evidence Nosip ATTTA 54-959 1065-1069

DNA & RNA Element - miRTarBase Target Gene (Entrez ID) miRTarBase ID miRNA Species (miRNA) Target Gene Species (Target Gene) Experiments Support Type References (PMID) MIRT586459 mmu-miR-10b-5p Mus musculus Nosip 66394 Mus musculus HITS-CLIP Functional MTI (Weak) 25083871 MIRT586460 mmu-miR-339-5p Mus musculus Nosip 66394 Mus musculus HITS-CLIP Functional MTI (Weak) 25083871 MIRT586458 mmu-miR-10a-5p Mus musculus Nosip 66394 Mus musculus HITS-CLIP Functional MTI (Weak) 25083871 MIRT586457 mmu-miR-706 Mus musculus Nosip 66394 Mus musculus HITS-CLIP Functional MTI (Weak) 25083871 MIRT586456 mmu-miR-665-3p Mus musculus Nosip 66394 Mus musculus HITS-CLIP Functional MTI (Weak) 25083871 MIRT598009 mmu-miR-1946a Mus musculus Nosip 66394 Mus musculus HITS-CLIP Functional MTI (Weak) 21258322 MIRT598008 mmu-miR-1965 Mus musculus Nosip 66394 Mus musculus HITS-CLIP Functional MTI (Weak) 21258322 MIRT598010 mmu-miR-5111-3p Mus musculus Nosip 66394 Mus musculus HITS-CLIP Functional MTI (Weak) 21258322

DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0004524 mmu-miR-30b* 66394 Nosip cugcauuUGUAGGUGUAGGGUc :::|:: ||||||| ucaccccGUGUUUCCAUCCCAu 2 16 688 709 [mm9:7:52333457-52333478:+] 0.5012 147 7 -17.41 -0.3980 MIMAT0004527 mmu-miR-124* 66394 Nosip uaguuccaggcgacACUUGUGc ||||||| uccucuucuuucccUGAACACc 2 9 333 354 [mm9:7:52333102-52333123:+] 0.5011 140 7 -9.77 -0.1801 MIMAT0004527 mmu-miR-124* 66394 Nosip uagUUCCAGGCGACACUUGUGc || || | ||||||||: auaAACGU-GGAUGUGAACAUc 2 20 12 32 [mm9:7:52332765-52332785:+] 0.5520 141 0 -14.79 -0.2216 MIMAT0000137 mmu-miR-126-5p 66394 Nosip gcgcaugguuuucAUUAUUac |||||| ----gccguggccUAAUAAac 3 9 1 17 [mm9:7:52332754-52332770:+] 0.6671 120 0 -8.13 -0.1214 MIMAT0004624 mmu-miR-15a* 66394 Nosip acuccgucgugucaUACCGGAc :|||||| -----------gccGUGGCCUa 2 9 1 11 [mm9:7:52332754-52332764:+] 0.6671 124 6 -9.99 -0.1726 MIMAT0004635 mmu-miR-92a* 66394 Nosip cauUACGGUGGUUAGGGGUGGa ||| ||| : ||||||| gacAUG-GACCUGCCCCCACCa 2 20 241 261 [mm9:7:52333010-52333030:+] 0.5010 153 7 -19.95 -0.1185 MIMAT0004638 mmu-miR-323-5p 66394 Nosip cgcUUGCGCGGUGCCUGGUGGa || | | |:| ||||||| cucAAAGAGACGCAGACCACCc 2 20 406 427 [mm9:7:52333175-52333196:+] 0.5013 159 7 -20.39 -0.2953 MIMAT0000672 mmu-miR-199b* 66394 Nosip cuugucCAUC-AGAUUUGU-GACCc ||:| | |:|||| |||| -----cGUGGAUGUGAACAUCUGGa 2 18 1 20 [mm9:7:52332770-52332789:+] 0.5520 124 0 -14.98 -0.1082 MIMAT0002108 mmu-miR-467a-1* 66394 Nosip cacAUCCACACACAUACAUAUa |: || | ||||||| uguUGAGUUCCUUAAUGUAUAu 2 20 497 518 [mm9:7:52333266-52333287:+] 0.5012 143 7 -7.85 -0.8060 MIMAT0003376 mmu-miR-302c 66394 Nosip ggugacUUUGUACCUUCGUGAa :|:|| | ||||||| ugccaaGAGCA-GCAAGCACUc 2 17 649 669 [mm9:7:52333418-52333438:+] 0.5012 150 7 -16.91 -0.1125 MIMAT0003892 mmu-miR-762 66394 Nosip cgaGACAGGGCCGGGGUCGGGg || |||| ||||||||| caaCU-UCCCUUCCCCAGCCCc 2 20 375 395 [mm9:7:52333144-52333164:+] 0.5013 165 7 -34.90 -0.2000 MIMAT0003452 mmu-miR-678 66394 Nosip ggAGGUCAGGAAC--GUGG-CUCUg |:| ||| || |||| |||| ucUUCUUUCCCUGAACACCUGAGAa 2 21 336 360 [mm9:7:52333105-52333129:+] 0.5013 123 0 -21.86 -0.7321 MIMAT0004825 mmu-miR-423-5p 66394 Nosip uuucagagcgagagACGGGGAGu |||||||| cugcccccaccaagUGCCCCUCc 2 10 250 272 [mm9:7:52333019-52333041:+] 0.5010 145 7 -17.02 -0.1597 MIMAT0003478 mmu-miR-467b* 66394 Nosip caCAAC-CACACACAUACAUAUa |||| || | ||||||| guGUUGAGUUCCUUAAUGUAUAu 2 21 496 518 [mm9:7:52333265-52333287:+] 0.5012 151 7 -14.79 -0.8060 MIMAT0003499 mmu-miR-709 66394 Nosip agGAGGACGGAGACGGAGg ||| | || ||||||| ccCUCAU-CC-CUGCCUCc 2 18 425 441 [mm9:7:52333194-52333210:+] 0.5013 149 7 -27.29 -0.2111 MIMAT0004236 mmu-miR-741 66394 Nosip agaUGUA-UCUUACCGUAGAGAGu || | ||||| ||||||| aacACCUGAGAAU---AUCUCUCa 2 21 349 369 [mm9:7:52333118-52333138:+] 0.5013 151 7 -16.59 -0.8387 MIMAT0004842 mmu-miR-879 66394 Nosip ccgaaUCUCGAUAUUCG-GAGa ||||| : |||| ||| ugccaAGAGCAGCAAGCACUCu 2 17 649 670 [mm9:7:52333418-52333439:+] 0.5012 124 0 -17.78 -0.2523 MIMAT0004867 mmu-miR-327 66394 Nosip uaGGAGUACGG--GGA-GUUCa |||||| || ||| |||| acCCUCAUCCCUGCCUCCAAGu 2 18 424 445 [mm9:7:52333193-52333214:+] 0.5013 128 0 -22.61 -0.4356 MIMAT0004868 mmu-miR-343 66394 Nosip agaccCGUGUA-CUUCCCUCu |:|:|| ||||||| uuaauGUAUAUCUAAGGGAGg 2 16 508 528 [mm9:7:52333277-52333297:+] 0.5012 150 7 -17.51 -0.4712 MIMAT0004884 mmu-miR-466h 66394 Nosip auGUGUGUUCGUGUACGUGUGu :::|| :||| |||||||| uuUGUACUGGCAAAUGCACACa 2 21 466 487 [mm9:7:52333235-52333256:+] 0.5012 168 7 -21.70 -0.9651 MIMAT0004884 mmu-miR-466h 66394 Nosip auGUGUGUUCGUGU-ACGUGUGu | ||: | |||| ||||||| gaCCCAUUA-CACACUGCACACu 2 21 289 310 [mm9:7:52333058-52333079:+] 0.5010 157 7 -18.57 -0.2410 MIMAT0004887 mmu-miR-467d* 66394 Nosip cacAUCCACACACAUACAUAUa |: || | ||||||| uguUGAGUUCCUUAAUGUAUAu 2 20 497 518 [mm9:7:52333266-52333287:+] 0.5012 143 7 -7.85 -0.8060 MIMAT0004930 mmu-miR-466d-5p 66394 Nosip guACAUGUAC--AUGCGUGUGUGu ||||| | |:|||||||| uuUGUACUGGCAAAUGCACACACu 2 21 466 489 [mm9:7:52333235-52333258:+] 0.5012 159 7 -22.65 -0.5083 MIMAT0005294 mmu-miR-467e* 66394 Nosip uauAUCCACACACAUACAUAUa |: || | ||||||| uguUGAGUUCCUUAAUGUAUAu 2 20 497 518 [mm9:7:52333266-52333287:+] 0.5012 143 7 -6.84 -0.8060 MIMAT0005833 mmu-miR-669d 66394 Nosip uguauaUGUACGUGUGUG-UUCa | |||||||||| ||| acuggcAAAUGCACACACUAAGc 2 17 471 493 [mm9:7:52333240-52333262:+] 0.5012 136 0 -19.05 -0.6873 MIMAT0005839 mmu-miR-669f 66394 Nosip uauGCACACACACAUACAUAUAc :| || | |||||||| uguUGAGUUCCUUAAUGUAUAUc 2 21 497 519 [mm9:7:52333266-52333288:+] 0.5012 148 7 -6.41 -0.7402 MIMAT0005841 mmu-miR-669h-5p 66394 Nosip cgUGAGUUGAUAUGUGG-GUACGUa ||| || |:| :| |||||| acACUGCACACUGCUUCACAUGCAc 2 23 299 323 [mm9:7:52333068-52333092:+] 0.5010 126 6 -18.38 -0.2372 MIMAT0005845 mmu-miR-466k 66394 Nosip agUGUACAUGUACAUGUGUGUGu || || :|| |:||||||| guAC-UG-GCAAAUGCACACACu 2 22 469 489 [mm9:7:52333238-52333258:+] 0.5012 153 7 -18.17 -0.5048 MIMAT0005848 mmu-miR-466j 66394 Nosip aauGUGUGUACGUGUACGUGUGu :::|| ||| |||||||| cuuUGUACUGGCAAAUGCACACa 2 21 465 487 [mm9:7:52333234-52333256:+] 0.5012 164 7 -21.74 -0.9651 MIMAT0005848 mmu-miR-466j 66394 Nosip aaUGUGUGU-ACGUGU-ACGUGUGu | || || | |||| ||||||| acAGACCCAUUACACACUGCACACu 2 22 286 310 [mm9:7:52333055-52333079:+] 0.5010 163 7 -18.96 -0.2410 MIMAT0009398 mmu-miR-1934 66394 Nosip ucuccugcuucguccCCUGGUCu ||||||| uuacucagucacuuaGGACCAGg 2 9 92 114 [mm9:7:52332861-52332883:+] 0.5006 140 7 -15.53 -0.2272 MIMAT0009399 mmu-miR-1935 66394 Nosip ucUCUAGGCGGUCGGAGACGGa ||: ::| : |||||||| ccAGGCUUG-GGUCCUCUGCCa 2 21 633 653 [mm9:7:52333402-52333422:+] 0.5012 146 7 -20.18 -0.1038 MIMAT0009404 mmu-miR-1940 66394 Nosip uugacgaGGUGGAAG-AGUCA-GGAGGUa ||||| || || | |||||| acgcagaCCACCCUCAUCCCUGCCUCCAa 2 21 415 443 [mm9:7:52333184-52333212:+] 0.5013 131 6 -23.76 -0.7269 MIMAT0009419 mmu-miR-669m 66394 Nosip uaUACAA-ACA--CACCUACAUAUa :|||| || | ||||||| aaGUGUUGAGUUCCUUAAUGUAUAu 2 21 494 518 [mm9:7:52333263-52333287:+] 0.5012 142 7 -9.32 -0.8023 MIMAT0009424 mmu-miR-1953 66394 Nosip gucuucggacucuuGAAAGGGu ||||||| acccuccuccucuuCUUUCCCu 2 9 326 347 [mm9:7:52333095-52333116:+] 0.5011 140 7 -14.31 -0.5945 MIMAT0009445 mmu-miR-1274a 66394 Nosip accGCGGACUUGUCCCUGGACu | ||| :||| ||||||| agaCCCCUAGACAUGGACCUGc 2 20 232 253 [mm9:7:52333001-52333022:+] 0.5010 167 7 -22.44 -0.1677 MIMAT0012771 mmu-miR-432 66394 Nosip gacGGGUGACUA--GAU-GAGGUUCu | | || || ||: ||||||| gacCACCCUCAUCCCUGCCUCCAAGu 2 21 420 445 [mm9:7:52333189-52333214:+] 0.5013 150 7 -19.78 -0.3336 MIMAT0000146 mmu-miR-134 66394 Nosip ggGGAGACC---AGUUGGUCAGUGu |: |||| |:| :||||||| ggCUCCUGGGAUUUACUCAGUCACu 2 21 80 104 [mm9:7:52332849-52332873:+] 0.5006 155 7 -24.13 -0.4004 MIMAT0000151 mmu-miR-140 66394 Nosip gaugguaucccauUUUGGUGAc |||||||| cagcaagcacucuAAACCACUg 2 10 658 679 [mm9:7:52333427-52333448:+] 0.5012 145 7 -16.68 -0.3928 MIMAT0000219 mmu-miR-24 66394 Nosip gacaaggacgacuUGACUCGGu |||||||| agcacucuaaaccACUGAGCCa 2 10 663 684 [mm9:7:52333432-52333453:+] 0.5012 145 7 -16.97 -0.8451 MIMAT0000229 mmu-miR-199a-5p 66394 Nosip cuugucCAUC-AGACUUGU-GACCc ||:| | |||||| |||| -----cGUGGAUGUGAACAUCUGGa 2 18 1 20 [mm9:7:52332770-52332789:+] 0.5520 128 0 -17.45 -0.1082 MIMAT0000546 mmu-miR-103 66394 Nosip aguaucgggaCAUGUUAC-GACGa || ||||| |||| gugcacaugaGUCCAAUGCCUGCa 2 14 534 557 [mm9:7:52333303-52333326:+] 0.5012 121 0 -15.33 -0.3746 MIMAT0000647 mmu-miR-107 66394 Nosip acuaucgggaCAUGUUAC-GACGa || ||||| |||| gugcacaugaGUCCAAUGCCUGCa 2 14 534 557 [mm9:7:52333303-52333326:+] 0.5012 121 0 -12.53 -0.3746 MIMAT0000658 mmu-miR-210 66394 Nosip agUC-GGCGACAGUGUG-CGUGUc || || | ||||| ||||| acAGACCCAUUACACACUGCACAc 2 21 286 309 [mm9:7:52333055-52333078:+] 0.5010 123 0 -20.27 -0.3776 MIMAT0000667 mmu-miR-33 66394 Nosip acGUUACGU-UGAU---GU-UACGUg || |||| |||: || ||||| caCACUGCACACUGCUUCACAUGCAc 2 20 298 323 [mm9:7:52333067-52333092:+] 0.5010 121 0 -18.67 -0.2351 MIMAT0000708 mmu-miR-363 66394 Nosip augUCUACCUAUGGCACGU-UAa :|| ||:| ::||||| || aagGGAGGGGU-UUGUGCACAUg 2 20 521 542 [mm9:7:52333290-52333311:+] 0.5012 121 0 -15.24 -0.3157 MIMAT0004855 mmu-miR-876-3p 66394 Nosip acUUAAUGAAACAUUUGGUGAu || || | ||||||||| gcAAGCAC--UCUAAACCACUg 2 21 660 679 [mm9:7:52333429-52333448:+] 0.5012 153 7 -14.22 -0.3778 MIMAT0004899 mmu-miR-92b 66394 Nosip ccUCCGGCCCUGCUCACGU-UAu ||| |||:: ||||| || uaAGGGAGGGGUUUGUGCACAUg 2 21 520 542 [mm9:7:52333289-52333311:+] 0.5012 124 0 -20.47 -0.3157

DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G009030 Nosip Mus musculus 66394

DNA & RNA Element - RepTar Gene Name miRNA Begin End Profile Nosip mghv-miR-M1-9 beg:15 end:28 pic:3' TTTTTCCAGGTCCGTTTACACT 5'& | .|||||| &5' ------------GTGGATGTGA 3' Nosip mmu-miR-1193 beg:1 end:12 pic:3' CTATCATTTTGCCCACTGGAT 5'& |||.|||| &5' -------------GTGGCCTA 3' Nosip mmu-miR-124star beg:14 end:32 pic:3' TAGTTCCAGGCG---ACACTTGTGC 5'& ||. ||||||||. &5' ---------CGTGGATGTGAACAT- 3' Nosip mmu-miR-15astar beg:1 end:11 pic:3' ACTCCGTCGTGTCATACCGGAC 5'& .|||||| &5' --------------GTGGCCT- 3' Nosip mmu-miR-181d beg:6 end:26 pic:3' TGGGTGGCTGTTGTTACTTACAA 5'& .||.| ||| .||.|||| &5' GCCTAATA--AAC-GTGGATGT- 3' Nosip mmu-miR-23a beg:14 end:28 pic:3' CCTTTAGGGACCGTTACACTA 5'& | ||| |||||| &5' -------CGTGG--ATGTGA- 3' Nosip mmu-miR-23b beg:14 end:28 pic:3' CCATTAGGGACCGTTACACTA 5'& | ||| |||||| &5' -------CGTGG--ATGTGA- 3'

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Nosip RAID00110236 mmu-miR-92b-3p miRNA MIMAT0004899 Nosip mRNA 66394 Prediction 0.1828 Nosip RAID00220065 mmu-miR-363-3p miRNA MIMAT0000708 Nosip mRNA 66394 Prediction 0.1828 Nosip RAID00528571 mmu-miR-6416-3p miRNA MIMAT0025171 Nosip mRNA 66394 Prediction 0.1828 Nosip RAID00700620 mmu-miR-24-3p miRNA MIMAT0000219 Nosip mRNA 66394 Prediction 0.1828 Nosip RAID00754461 mmu-miR-33-5p miRNA MIMAT0000667 Nosip mRNA 66394 Prediction 0.1828 Nosip RAID01020334 mmu-miR-466n-5p miRNA MIMAT0014893 Nosip mRNA 66394 Prediction 0.1828 Nosip RAID01229595 mmu-miR-7001-5p miRNA MIMAT0027904 Nosip mRNA 66394 Prediction 0.1828 Nosip RAID01329077 mmu-miR-134-5p miRNA MIMAT0000146 Nosip mRNA 66394 Prediction 0.1828 Nosip RAID01378271 mmu-miR-346-3p miRNA MIMAT0017039 Nosip mRNA 66394 Prediction 0.1828 Nosip RAID01479988 mmu-miR-339-5p miRNA MIMAT0000584 Nosip mRNA 66394 CLIP-seq 0.5483 Nosip RAID01554750 mmu-miR-665-3p miRNA MIMAT0003733 Nosip mRNA 66394 CLIP-seq 0.5483 Nosip RAID01643303 mmu-miR-103-3p miRNA MIMAT0000546 Nosip mRNA 66394 Prediction 0.1828 Nosip RAID01830681 mmu-miR-210-3p miRNA MIMAT0000658 Nosip mRNA 66394 Prediction 0.1828 Nosip RAID02237441 mmu-miR-7020-5p miRNA MIMAT0027944 Nosip mRNA 66394 Prediction 0.1828 Nosip RAID02300418 mmu-miR-199a-5p miRNA MIMAT0000229 Nosip mRNA 66394 Prediction 0.1828 Nosip RAID02315195 mmu-miR-7093-3p miRNA MIMAT0028093 Nosip mRNA 66394 Prediction 0.1828 Nosip RAID02603905 mmu-miR-140-5p miRNA MIMAT0000151 Nosip mRNA 66394 Prediction 0.1828 Nosip RAID02910833 mmu-miR-107-3p miRNA MIMAT0000647 Nosip mRNA 66394 Prediction 0.1828 Nosip RAID03137564 mmu-miR-706 miRNA MIMAT0003496 Nosip mRNA 66394 CLIP-seq 0.5483 Nosip RAID03432892 mmu-miR-3064-3p miRNA MIMAT0014835 Nosip mRNA 66394 Prediction 0.1828 Nosip RAID03452779 mmu-miR-1946a miRNA MIMAT0009412 Nosip mRNA 66394 CLIP-seq//Prediction 0.6308 Nosip RAID03705487 mmu-miR-10b-5p miRNA MIMAT0000208 Nosip mRNA 66394 CLIP-seq 0.5483 Nosip RAID03808711 mmu-miR-10a-5p miRNA MIMAT0000648 Nosip mRNA 66394 CLIP-seq 0.5483 Nosip RAID03851928 mmu-miR-876-3p miRNA MIMAT0004855 Nosip mRNA 66394 Prediction 0.1828