Nosip
DNA & RNA Element - AREsite
Gene NameMotifCDS AreaARE AreaEvidence
NosipATTTA54-9591065-1069
DNA & RNA Element - miRTarBase
Target Gene (Entrez ID)miRTarBase IDmiRNASpecies (miRNA)Target GeneSpecies (Target Gene)ExperimentsSupport TypeReferences (PMID)
MIRT586459mmu-miR-10b-5pMus musculusNosip66394Mus musculusHITS-CLIPFunctional MTI (Weak)25083871
MIRT586460mmu-miR-339-5pMus musculusNosip66394Mus musculusHITS-CLIPFunctional MTI (Weak)25083871
MIRT586458mmu-miR-10a-5pMus musculusNosip66394Mus musculusHITS-CLIPFunctional MTI (Weak)25083871
MIRT586457mmu-miR-706Mus musculusNosip66394Mus musculusHITS-CLIPFunctional MTI (Weak)25083871
MIRT586456mmu-miR-665-3pMus musculusNosip66394Mus musculusHITS-CLIPFunctional MTI (Weak)25083871
MIRT598009mmu-miR-1946aMus musculusNosip66394Mus musculusHITS-CLIPFunctional MTI (Weak)21258322
MIRT598008mmu-miR-1965Mus musculusNosip66394Mus musculusHITS-CLIPFunctional MTI (Weak)21258322
MIRT598010mmu-miR-5111-3pMus musculusNosip66394Mus musculusHITS-CLIPFunctional MTI (Weak)21258322
DNA & RNA Element - microRNA
Mirbase AccmiRNA NameGene IDGene SymbolmiRNA AlignmentAlignmentGene AlignmentmiRNA StartmiRNA EndGene StartGene EndGenome CoordinatesConservationAlign ScoreSeed CatEnergymirSVR Score
MIMAT0004524mmu-miR-30b*66394NosipcugcauuUGUAGGUGUAGGGUc :::|:: ||||||| ucaccccGUGUUUCCAUCCCAu216688709[mm9:7:52333457-52333478:+]0.50121477-17.41-0.3980
MIMAT0004527mmu-miR-124*66394NosipuaguuccaggcgacACUUGUGc ||||||| uccucuucuuucccUGAACACc29333354[mm9:7:52333102-52333123:+]0.50111407-9.77-0.1801
MIMAT0004527mmu-miR-124*66394NosipuagUUCCAGGCGACACUUGUGc || || | ||||||||: auaAACGU-GGAUGUGAACAUc2201232[mm9:7:52332765-52332785:+]0.55201410-14.79-0.2216
MIMAT0000137mmu-miR-126-5p66394NosipgcgcaugguuuucAUUAUUac |||||| ----gccguggccUAAUAAac39117[mm9:7:52332754-52332770:+]0.66711200-8.13-0.1214
MIMAT0004624mmu-miR-15a*66394NosipacuccgucgugucaUACCGGAc :|||||| -----------gccGUGGCCUa29111[mm9:7:52332754-52332764:+]0.66711246-9.99-0.1726
MIMAT0004635mmu-miR-92a*66394NosipcauUACGGUGGUUAGGGGUGGa ||| ||| : ||||||| gacAUG-GACCUGCCCCCACCa220241261[mm9:7:52333010-52333030:+]0.50101537-19.95-0.1185
MIMAT0004638mmu-miR-323-5p66394NosipcgcUUGCGCGGUGCCUGGUGGa || | | |:| ||||||| cucAAAGAGACGCAGACCACCc220406427[mm9:7:52333175-52333196:+]0.50131597-20.39-0.2953
MIMAT0000672mmu-miR-199b*66394NosipcuugucCAUC-AGAUUUGU-GACCc ||:| | |:|||| |||| -----cGUGGAUGUGAACAUCUGGa218120[mm9:7:52332770-52332789:+]0.55201240-14.98-0.1082
MIMAT0002108mmu-miR-467a-1*66394NosipcacAUCCACACACAUACAUAUa |: || | ||||||| uguUGAGUUCCUUAAUGUAUAu220497518[mm9:7:52333266-52333287:+]0.50121437-7.85-0.8060
MIMAT0003376mmu-miR-302c66394NosipggugacUUUGUACCUUCGUGAa :|:|| | ||||||| ugccaaGAGCA-GCAAGCACUc217649669[mm9:7:52333418-52333438:+]0.50121507-16.91-0.1125
MIMAT0003892mmu-miR-76266394NosipcgaGACAGGGCCGGGGUCGGGg || |||| ||||||||| caaCU-UCCCUUCCCCAGCCCc220375395[mm9:7:52333144-52333164:+]0.50131657-34.90-0.2000
MIMAT0003452mmu-miR-67866394NosipggAGGUCAGGAAC--GUGG-CUCUg |:| ||| || |||| |||| ucUUCUUUCCCUGAACACCUGAGAa221336360[mm9:7:52333105-52333129:+]0.50131230-21.86-0.7321
MIMAT0004825mmu-miR-423-5p66394NosipuuucagagcgagagACGGGGAGu |||||||| cugcccccaccaagUGCCCCUCc210250272[mm9:7:52333019-52333041:+]0.50101457-17.02-0.1597
MIMAT0003478mmu-miR-467b*66394NosipcaCAAC-CACACACAUACAUAUa |||| || | ||||||| guGUUGAGUUCCUUAAUGUAUAu221496518[mm9:7:52333265-52333287:+]0.50121517-14.79-0.8060
MIMAT0003499mmu-miR-70966394NosipagGAGGACGGAGACGGAGg ||| | || ||||||| ccCUCAU-CC-CUGCCUCc218425441[mm9:7:52333194-52333210:+]0.50131497-27.29-0.2111
MIMAT0004236mmu-miR-74166394NosipagaUGUA-UCUUACCGUAGAGAGu || | ||||| ||||||| aacACCUGAGAAU---AUCUCUCa221349369[mm9:7:52333118-52333138:+]0.50131517-16.59-0.8387
MIMAT0004842mmu-miR-87966394NosipccgaaUCUCGAUAUUCG-GAGa ||||| : |||| ||| ugccaAGAGCAGCAAGCACUCu217649670[mm9:7:52333418-52333439:+]0.50121240-17.78-0.2523
MIMAT0004867mmu-miR-32766394NosipuaGGAGUACGG--GGA-GUUCa |||||| || ||| |||| acCCUCAUCCCUGCCUCCAAGu218424445[mm9:7:52333193-52333214:+]0.50131280-22.61-0.4356
MIMAT0004868mmu-miR-34366394NosipagaccCGUGUA-CUUCCCUCu |:|:|| ||||||| uuaauGUAUAUCUAAGGGAGg216508528[mm9:7:52333277-52333297:+]0.50121507-17.51-0.4712
MIMAT0004884mmu-miR-466h66394NosipauGUGUGUUCGUGUACGUGUGu :::|| :||| |||||||| uuUGUACUGGCAAAUGCACACa221466487[mm9:7:52333235-52333256:+]0.50121687-21.70-0.9651
MIMAT0004884mmu-miR-466h66394NosipauGUGUGUUCGUGU-ACGUGUGu | ||: | |||| ||||||| gaCCCAUUA-CACACUGCACACu221289310[mm9:7:52333058-52333079:+]0.50101577-18.57-0.2410
MIMAT0004887mmu-miR-467d*66394NosipcacAUCCACACACAUACAUAUa |: || | ||||||| uguUGAGUUCCUUAAUGUAUAu220497518[mm9:7:52333266-52333287:+]0.50121437-7.85-0.8060
MIMAT0004930mmu-miR-466d-5p66394NosipguACAUGUAC--AUGCGUGUGUGu ||||| | |:|||||||| uuUGUACUGGCAAAUGCACACACu221466489[mm9:7:52333235-52333258:+]0.50121597-22.65-0.5083
MIMAT0005294mmu-miR-467e*66394NosipuauAUCCACACACAUACAUAUa |: || | ||||||| uguUGAGUUCCUUAAUGUAUAu220497518[mm9:7:52333266-52333287:+]0.50121437-6.84-0.8060
MIMAT0005833mmu-miR-669d66394NosipuguauaUGUACGUGUGUG-UUCa | |||||||||| ||| acuggcAAAUGCACACACUAAGc217471493[mm9:7:52333240-52333262:+]0.50121360-19.05-0.6873
MIMAT0005839mmu-miR-669f66394NosipuauGCACACACACAUACAUAUAc :| || | |||||||| uguUGAGUUCCUUAAUGUAUAUc221497519[mm9:7:52333266-52333288:+]0.50121487-6.41-0.7402
MIMAT0005841mmu-miR-669h-5p66394NosipcgUGAGUUGAUAUGUGG-GUACGUa ||| || |:| :| |||||| acACUGCACACUGCUUCACAUGCAc223299323[mm9:7:52333068-52333092:+]0.50101266-18.38-0.2372
MIMAT0005845mmu-miR-466k66394NosipagUGUACAUGUACAUGUGUGUGu || || :|| |:||||||| guAC-UG-GCAAAUGCACACACu222469489[mm9:7:52333238-52333258:+]0.50121537-18.17-0.5048
MIMAT0005848mmu-miR-466j66394NosipaauGUGUGUACGUGUACGUGUGu :::|| ||| |||||||| cuuUGUACUGGCAAAUGCACACa221465487[mm9:7:52333234-52333256:+]0.50121647-21.74-0.9651
MIMAT0005848mmu-miR-466j66394NosipaaUGUGUGU-ACGUGU-ACGUGUGu | || || | |||| ||||||| acAGACCCAUUACACACUGCACACu222286310[mm9:7:52333055-52333079:+]0.50101637-18.96-0.2410
MIMAT0009398mmu-miR-193466394NosipucuccugcuucguccCCUGGUCu ||||||| uuacucagucacuuaGGACCAGg2992114[mm9:7:52332861-52332883:+]0.50061407-15.53-0.2272
MIMAT0009399mmu-miR-193566394NosipucUCUAGGCGGUCGGAGACGGa ||: ::| : |||||||| ccAGGCUUG-GGUCCUCUGCCa221633653[mm9:7:52333402-52333422:+]0.50121467-20.18-0.1038
MIMAT0009404mmu-miR-194066394NosipuugacgaGGUGGAAG-AGUCA-GGAGGUa ||||| || || | |||||| acgcagaCCACCCUCAUCCCUGCCUCCAa221415443[mm9:7:52333184-52333212:+]0.50131316-23.76-0.7269
MIMAT0009419mmu-miR-669m66394NosipuaUACAA-ACA--CACCUACAUAUa :|||| || | ||||||| aaGUGUUGAGUUCCUUAAUGUAUAu221494518[mm9:7:52333263-52333287:+]0.50121427-9.32-0.8023
MIMAT0009424mmu-miR-195366394NosipgucuucggacucuuGAAAGGGu ||||||| acccuccuccucuuCUUUCCCu29326347[mm9:7:52333095-52333116:+]0.50111407-14.31-0.5945
MIMAT0009445mmu-miR-1274a66394NosipaccGCGGACUUGUCCCUGGACu | ||| :||| ||||||| agaCCCCUAGACAUGGACCUGc220232253[mm9:7:52333001-52333022:+]0.50101677-22.44-0.1677
MIMAT0012771mmu-miR-43266394NosipgacGGGUGACUA--GAU-GAGGUUCu | | || || ||: ||||||| gacCACCCUCAUCCCUGCCUCCAAGu221420445[mm9:7:52333189-52333214:+]0.50131507-19.78-0.3336
MIMAT0000146mmu-miR-13466394NosipggGGAGACC---AGUUGGUCAGUGu |: |||| |:| :||||||| ggCUCCUGGGAUUUACUCAGUCACu22180104[mm9:7:52332849-52332873:+]0.50061557-24.13-0.4004
MIMAT0000151mmu-miR-14066394NosipgaugguaucccauUUUGGUGAc |||||||| cagcaagcacucuAAACCACUg210658679[mm9:7:52333427-52333448:+]0.50121457-16.68-0.3928
MIMAT0000219mmu-miR-2466394NosipgacaaggacgacuUGACUCGGu |||||||| agcacucuaaaccACUGAGCCa210663684[mm9:7:52333432-52333453:+]0.50121457-16.97-0.8451
MIMAT0000229mmu-miR-199a-5p66394NosipcuugucCAUC-AGACUUGU-GACCc ||:| | |||||| |||| -----cGUGGAUGUGAACAUCUGGa218120[mm9:7:52332770-52332789:+]0.55201280-17.45-0.1082
MIMAT0000546mmu-miR-10366394NosipaguaucgggaCAUGUUAC-GACGa || ||||| |||| gugcacaugaGUCCAAUGCCUGCa214534557[mm9:7:52333303-52333326:+]0.50121210-15.33-0.3746
MIMAT0000647mmu-miR-10766394NosipacuaucgggaCAUGUUAC-GACGa || ||||| |||| gugcacaugaGUCCAAUGCCUGCa214534557[mm9:7:52333303-52333326:+]0.50121210-12.53-0.3746
MIMAT0000658mmu-miR-21066394NosipagUC-GGCGACAGUGUG-CGUGUc || || | ||||| ||||| acAGACCCAUUACACACUGCACAc221286309[mm9:7:52333055-52333078:+]0.50101230-20.27-0.3776
MIMAT0000667mmu-miR-3366394NosipacGUUACGU-UGAU---GU-UACGUg || |||| |||: || ||||| caCACUGCACACUGCUUCACAUGCAc220298323[mm9:7:52333067-52333092:+]0.50101210-18.67-0.2351
MIMAT0000708mmu-miR-36366394NosipaugUCUACCUAUGGCACGU-UAa :|| ||:| ::||||| || aagGGAGGGGU-UUGUGCACAUg220521542[mm9:7:52333290-52333311:+]0.50121210-15.24-0.3157
MIMAT0004855mmu-miR-876-3p66394NosipacUUAAUGAAACAUUUGGUGAu || || | ||||||||| gcAAGCAC--UCUAAACCACUg221660679[mm9:7:52333429-52333448:+]0.50121537-14.22-0.3778
MIMAT0004899mmu-miR-92b66394NosipccUCCGGCCCUGCUCACGU-UAu ||| |||:: ||||| || uaAGGGAGGGGUUUGUGCACAUg221520542[mm9:7:52333289-52333311:+]0.50121240-20.47-0.3157
DNA & RNA Element - TRANSFAC
AccessionASDescriptionSpeciesEntrezPubmedBinding Info
G009030NosipMus musculus66394
DNA & RNA Element - RepTar
Gene NamemiRNABeginEndProfile
Nosipmghv-miR-M1-9beg:15end:28pic:3' TTTTTCCAGGTCCGTTTACACT 5'& | .|||||| &5' ------------GTGGATGTGA 3'
Nosipmmu-miR-1193beg:1end:12pic:3' CTATCATTTTGCCCACTGGAT 5'& |||.|||| &5' -------------GTGGCCTA 3'
Nosipmmu-miR-124starbeg:14end:32pic:3' TAGTTCCAGGCG---ACACTTGTGC 5'& ||. ||||||||. &5' ---------CGTGGATGTGAACAT- 3'
Nosipmmu-miR-15astarbeg:1end:11pic:3' ACTCCGTCGTGTCATACCGGAC 5'& .|||||| &5' --------------GTGGCCT- 3'
Nosipmmu-miR-181dbeg:6end:26pic:3' TGGGTGGCTGTTGTTACTTACAA 5'& .||.| ||| .||.|||| &5' GCCTAATA--AAC-GTGGATGT- 3'
Nosipmmu-miR-23abeg:14end:28pic:3' CCTTTAGGGACCGTTACACTA 5'& | ||| |||||| &5' -------CGTGG--ATGTGA- 3'
Nosipmmu-miR-23bbeg:14end:28pic:3' CCATTAGGGACCGTTACACTA 5'& | ||| |||||| &5' -------CGTGG--ATGTGA- 3'
DNA & RNA Element - RAID2
Gene NameRAID IDInteractor 1Category 1ID 1Interactor 2Category 2ID 2MethodsScore
NosipRAID00110236mmu-miR-92b-3pmiRNAMIMAT0004899NosipmRNA66394Prediction0.1828
NosipRAID00220065mmu-miR-363-3pmiRNAMIMAT0000708NosipmRNA66394Prediction0.1828
NosipRAID00528571mmu-miR-6416-3pmiRNAMIMAT0025171NosipmRNA66394Prediction0.1828
NosipRAID00700620mmu-miR-24-3pmiRNAMIMAT0000219NosipmRNA66394Prediction0.1828
NosipRAID00754461mmu-miR-33-5pmiRNAMIMAT0000667NosipmRNA66394Prediction0.1828
NosipRAID01020334mmu-miR-466n-5pmiRNAMIMAT0014893NosipmRNA66394Prediction0.1828
NosipRAID01229595mmu-miR-7001-5pmiRNAMIMAT0027904NosipmRNA66394Prediction0.1828
NosipRAID01329077mmu-miR-134-5pmiRNAMIMAT0000146NosipmRNA66394Prediction0.1828
NosipRAID01378271mmu-miR-346-3pmiRNAMIMAT0017039NosipmRNA66394Prediction0.1828
NosipRAID01479988mmu-miR-339-5pmiRNAMIMAT0000584NosipmRNA66394CLIP-seq0.5483
NosipRAID01554750mmu-miR-665-3pmiRNAMIMAT0003733NosipmRNA66394CLIP-seq0.5483
NosipRAID01643303mmu-miR-103-3pmiRNAMIMAT0000546NosipmRNA66394Prediction0.1828
NosipRAID01830681mmu-miR-210-3pmiRNAMIMAT0000658NosipmRNA66394Prediction0.1828
NosipRAID02237441mmu-miR-7020-5pmiRNAMIMAT0027944NosipmRNA66394Prediction0.1828
NosipRAID02300418mmu-miR-199a-5pmiRNAMIMAT0000229NosipmRNA66394Prediction0.1828
NosipRAID02315195mmu-miR-7093-3pmiRNAMIMAT0028093NosipmRNA66394Prediction0.1828
NosipRAID02603905mmu-miR-140-5pmiRNAMIMAT0000151NosipmRNA66394Prediction0.1828
NosipRAID02910833mmu-miR-107-3pmiRNAMIMAT0000647NosipmRNA66394Prediction0.1828
NosipRAID03137564mmu-miR-706miRNAMIMAT0003496NosipmRNA66394CLIP-seq0.5483
NosipRAID03432892mmu-miR-3064-3pmiRNAMIMAT0014835NosipmRNA66394Prediction0.1828
NosipRAID03452779mmu-miR-1946amiRNAMIMAT0009412NosipmRNA66394CLIP-seq//Prediction0.6308
NosipRAID03705487mmu-miR-10b-5pmiRNAMIMAT0000208NosipmRNA66394CLIP-seq0.5483
NosipRAID03808711mmu-miR-10a-5pmiRNAMIMAT0000648NosipmRNA66394CLIP-seq0.5483
NosipRAID03851928mmu-miR-876-3pmiRNAMIMAT0004855NosipmRNA66394Prediction0.1828