DNA & RNA Element - RepTar |
Gene Name | miRNA | Begin | End | Profile |
Map3k11 | mmu-miR-199a-5p | beg:144 | end:161 | pic:3' CTTGTCCATCAGACTTGTGACCC 5'& || || ||||||| &5' --------AGCCTTCACACTGG- 3' |
Map3k11 | mmu-miR-302a | beg:332 | end:347 | pic:3' AGTGGTTTTGTACCTTCGTGAAT 5'& ||||| ||||||| &5' TCACC----------AGCACTT- 3' |
Map3k11 | mmu-miR-760 | beg:245 | end:262 | pic:3' AGGGGTGTCTGGGTCTCGGC 5'& . || |||||||| &5' -----GGAGGACCAGAGCC- 3' |
Map3k11 | mmu-miR-1186 | beg:329 | end:347 | pic:3' GTACGGAAATTAAGGTCGTGAG 5'& .||.| ||||||||. &5' -GTGTCA------CCAGCACTT 3' |
Map3k11 | mmu-miR-331-3p | beg:297 | end:315 | pic:3' AAGATCCTATCCGGGTCCCCG 5'& |||. |||.||||||| &5' ----AGGG-AGGTCCAGGGG- 3' |
Map3k11 | mmu-miR-299 | beg:162 | end:182 | pic:3' TTCGCCAAATGGCAGGGTGTAT 5'& | || ||| |||||||. &5' --GGGGGCTACAC-CCCACATG 3' |
Map3k11 | mmu-miR-1956 | beg:380 | end:399 | pic:3' AGGCGACTGAGTC-GGGACCTGA 5'& |.|| || .||||||| &5' ------GGCTGAGTTCCTGGAC- 3' |
Map3k11 | mmu-miR-125a-5p | beg:253 | end:273 | pic:3' AGTGTCCAATTTCC--CAGAGTCCCT 5'& |.|| |||||||||| &5' ---------AGAGCCTGTCTCAGGGA 3' |
Map3k11 | mmu-miR-432 | beg:366 | end:385 | pic:3' GACGGGTGACTAGATGAGGTTCT 5'& |||| ||| |||||||. &5' --GCCC-CTGT----CTCCAAGG 3' |
Map3k11 | mmu-miR-194 | beg:348 | end:365 | pic:3' AGGTGTACCTCAACGACAATGT 5'& ||| ||| ||||||| &5' -CCA-----AGTC-CTGTTAC- 3' |
Map3k11 | mmu-miR-106b | beg:330 | end:348 | pic:3' TAGAC-GTGACAGTCGTGAAAT 5'& || ||| ||||||||| &5' ---TGTCAC---CAGCACTTT- 3' |
Map3k11 | mmu-miR-93 | beg:330 | end:348 | pic:3' GATGGAC-GTGCTTGTCGTGAAAC 5'& || ||| ||||||||| &5' -----TGTCAC---CAGCACTTT- 3' |
Map3k11 | mmu-miR-675-3p | beg:36 | end:55 | pic:3' TGACTCG-CCAATCCCGTATGTC 5'& ||| || ||||||| &5' ---GAGGAGGCATA-GCATACA- 3' |
Map3k11 | mmu-miR-31star | beg:36 | end:51 | pic:3' CTACCGTTATACAACCGTATCGT 5'& | ||||||||| &5' -----------GGAGGCATAGCA 3' |
Map3k11 | mcmv-miR-M23-2 | beg:266 | end:283 | pic:3' GGCGAACTGGCTC----CGGGGGTA 5'& |.| ||||||| &5' ----------GGGAATTGCCCCCA- 3' |
Map3k11 | mmu-miR-615-5p | beg:384 | end:403 | pic:3' CTAGGCTCGTGGCCCCTGGGGG 5'& |.|||. || |||||||| &5' ---CTGAGTTCCT-GGACCCCC 3' |
Map3k11 | mcmv-miR-M87-1 | beg:71 | end:89 | pic:3' CGACGGCGACGGCTGCCGACGGA 5'& ||| |||. |||||||| &5' ---GCCTCTGT----GGCTGCCT 3' |
Map3k11 | mmu-miR-802 | beg:351 | end:367 | pic:3' TTCCTACTTAGAAACAATGACT 5'& |.|| |||||||| &5' -------AGTCC-TGTTACTG- 3' |
Map3k11 | mmu-miR-873 | beg:379 | end:396 | pic:3' TCCTCTGAGTGTTCAAGGACG 5'& ||.|| .|||||||| &5' ---AGGCT---GAGTTCCTG- 3' |
Map3k11 | mmu-miR-1188 | beg:134 | end:159 | pic:3' AGGACCGGG---TTGG-AGTGTGGT 5'& ||| | |.|| ||||||. &5' --CTGCACAGAAAGCCTTCACACT- 3' |
Map3k11 | mmu-miR-124 | beg:424 | end:444 | pic:3' CCGTAAGTGGCGCACGGAAT 5'& ||| || |.| ||||||| &5' GGC--TCTCTGGGTGCCTT- 3' |
Map3k11 | mmu-miR-125b-5p | beg:250 | end:273 | pic:3' AGTGTTCAATCCCAGAGTCCCT 5'& || || |||||||||| &5' --ACCAGAGCCTGTCTCAGGGA 3' |
Map3k11 | mmu-miR-128 | beg:351 | end:369 | pic:3' TTTCTCTGGCCAAGTGACACT 5'& || || |.||||||. &5' ----AGTCCTG-TTACTGTGG 3' |
Map3k11 | mmu-miR-130bstar | beg:301 | end:321 | pic:3' TCATCACGTTGTCCCTTTCTCA 5'& || |. .|||||||.| &5' ---AG-GTCCAGGGGAAAGGG- 3' |
Map3k11 | mmu-miR-133a | beg:236 | end:259 | pic:3' GTCGACCAACTTCC-CCTGGTTT 5'& .|||||||| ||| ||||||.| &5' TAGCTGGTT--AGGAGGACCAGA 3' |
Map3k11 | mmu-miR-133b | beg:236 | end:259 | pic:3' ATCGACCAACTTCC-CCTGGTTT 5'& ||||||||| ||| ||||||.| &5' TAGCTGGTT--AGGAGGACCAGA 3' |
Map3k11 | mmu-miR-139-3p | beg:360 | end:382 | pic:3' GAGGTTGTC-CCGGC-GCAGAGGT 5'& || | |||| .||||||| &5' -----ACTGTGGCCCCTGTCTCCA 3' |
Map3k11 | mmu-miR-139-5p | beg:351 | end:370 | pic:3' GACCTCTGTGCACGTGACATCT 5'& || | .|| .|||||.| &5' ----AGTCCTGT-TACTGTGG- 3' |
Map3k11 | mmu-miR-139-5p | beg:174 | end:213 | pic:3' GACCTCTGTGCACG------TGACATCT 5'& ||| ||| |||||||. &5' -------CACATGCCTACAAACTGTAGG 3' |
Map3k11 | mmu-miR-142-3p | beg:110 | end:137 | pic:3' AGGTA--TTTCA-TCCTTTGTGATGT 5'& || ...|| ||| ||||||||| &5' -CCTTTGGGGGTCAGG-AACACTACA 3' |
Map3k11 | mmu-miR-145 | beg:297 | end:323 | pic:3' TCCCTA-AGGACCCTTTTGACCTG 5'& ||||| ||| |||.||| ||.| &5' AGGGAGGTCCAGGGGAAAG-GGGC 3' |
Map3k11 | mmu-miR-145star | beg:54 | end:73 | pic:3' GTTCTTGTCATAAAGGTCCTTA 5'& .||| || ||||||. &5' --GGAAGAGGAA--CCAGGAG- 3' |
Map3k11 | mmu-miR-145star | beg:295 | end:315 | pic:3' GTTCTTGTCATAA-AGGTCCTTA 5'& ||.||| ||||||.. &5' ---GAGCAGGGAGGTCCAGGGG- 3' |
Map3k11 | mmu-miR-150star | beg:370 | end:394 | pic:3' GATAGGGGGTCCGGA-CATGGTC 5'& ||.||.|| ||||. || || &5' CTGTCTCCAAGGCTGAGTTCC-- 3' |
Map3k11 | mmu-miR-186star | beg:262 | end:288 | pic:3' GGGTTTTTTAAGTGGAATCC-CG 5'& |.||...|||| || ||| || &5' CTCAGGGAATTGCCCCCAGGAGC 3' |
Map3k11 | mmu-miR-1904 | beg:289 | end:304 | pic:3' GGAGGGAGGTCTCCTCGTCTTG 5'& ||| |||||||.. &5' --------CAG-GGAGCAGGG- 3' |
Map3k11 | mmu-miR-1929 | beg:381 | end:398 | pic:3' GAGACGAGATATTTC-AGGATCTT 5'& ||| .|| ||||.|| &5' ----GCT-----GAGTTCCTGGA- 3' |
Map3k11 | mmu-miR-1934 | beg:237 | end:259 | pic:3' TCTCCTGCTTC-GTCC-CCTGGTCT 5'& .| .| .||| |||||||| &5' -----GCT-GGTTAGGAGGACCAGA 3' |
Map3k11 | mmu-miR-1944 | beg:124 | end:146 | pic:3' TTAGTCTTGAACTGTAAGTCGTGTCTC 5'& .|||| ||| ||||||| &5' ----GGAACACTACACT--GCACAGA- 3' |
Map3k11 | mmu-miR-199a-5p | beg:38 | end:59 | pic:3' CTTGTCC--ATCAGACTTGTGACCC 5'& ||| ||| | ||||||| &5' ----AGGCATAG-CAT-ACACTGG- 3' |
Map3k11 | mmu-miR-199bstar | beg:38 | end:59 | pic:3' CTTGTCC--ATCAGATTTGTGACCC 5'& ||| ||| | ||||||| &5' ----AGGCATAG-CAT-ACACTGG- 3' |
Map3k11 | mmu-miR-199bstar | beg:138 | end:161 | pic:3' CTTGTCCATCAGATTTGTGACCC 5'& |||| || || ||||||| &5' --ACAGAAAGCCTTCACACTGG- 3' |
Map3k11 | mmu-miR-201 | beg:371 | end:391 | pic:3' TTCTTGTTACGGAA----TGACTCAT 5'& ||.|| .|||||| &5' --------TGTCTCCAAGGCTGAGT- 3' |
Map3k11 | mmu-miR-20a | beg:129 | end:153 | pic:3' GATG-GACGTGATATTCGTGAAAT 5'& |||| |||||| |||| ||| &5' CTACACTGCACAGAAAGC-CTT-- 3' |
Map3k11 | mmu-miR-2135 | beg:89 | end:110 | pic:3' CAAAGCCGGGGTTCTGGAGA 5'& ||||| |||||.| |||| &5' GTTTC--CCCCAGGGACTCT 3' |
Map3k11 | mmu-miR-2146 | beg:363 | end:382 | pic:3' GTGTACCTTGGGAAGAGGTG 5'& .||| ||. |||||| &5' ---GTGGCCCCTGTCTCCA- 3' |
Map3k11 | mmu-miR-27b | beg:351 | end:369 | pic:3' CGTCTTGAATCGGTGACACTT 5'& || || |..||||||. &5' --AGTCCT--GTTACTGTGG- 3' |
Map3k11 | mmu-miR-27bstar | beg:373 | end:393 | pic:3' CAAGTGGTTAGTCGATTCGAGA 5'& || |||| .|||.||.|| &5' --TCTCCAA--GGCTGAGTTC- 3' |
Map3k11 | mmu-miR-28 | beg:374 | end:395 | pic:3' GAGTTATCTGACACTCGAGGAA 5'& ||| ||.| ||||.|||| &5' CTCCA-AGGC--TGAGTTCCT- 3' |
Map3k11 | mmu-miR-295 | beg:325 | end:348 | pic:3' TCTGAGTTTTCATCA-TCGTGAAA 5'& ||||.. || |||||||| &5' ---CTCAGGTGTCACCAGCACTTT 3' |
Map3k11 | mmu-miR-296-3p | beg:385 | end:409 | pic:3' CCTCTCGGA---GGTGGGTTGGGAG 5'& ||| ||| || ||||||||| &5' -GAGTTCCTGGACC-CCCAACCCT- 3' |
Map3k11 | mmu-miR-296-5p | beg:417 | end:433 | pic:3' TGTCCTAACTCCCCCCCGGGA 5'& ||| |||||.|| &5' --------GAGCCGGGGCTCT 3' |
Map3k11 | mmu-miR-296-5p | beg:217 | end:227 | pic:3' TGTCCTAACTCCCCCCCGGGA 5'& ||||||. &5' -------------GGGGCCT- 3' |
Map3k11 | mmu-miR-29bstar | beg:50 | end:71 | pic:3' ATTTGGTGGTATA--CTTTGGTCG 5'& |||.. |.|||||| &5' -----CACTGGAAGAGGAACCAG- 3' |
Map3k11 | mmu-miR-302d | beg:325 | end:347 | pic:3' TGTGAGTTTGTACCT-TCGTGAAT 5'& ||||.. | ||||||| &5' ---CTCAGGTGTCACCAGCACTT- 3' |
Map3k11 | mmu-miR-30astar | beg:40 | end:61 | pic:3' CGACGT-TTGTAGGCTGACTTTC 5'& ||| |.||| ||||.||| &5' ---GCATAGCATAC-ACTGGAAG 3' |
Map3k11 | mmu-miR-30estar | beg:40 | end:60 | pic:3' CGACATTTGTAGGCTGACTTTC 5'& || |.||| ||||.||| &5' GCAT--AGCATAC-ACTGGAAG 3' |
Map3k11 | mmu-miR-326 | beg:292 | end:315 | pic:3' TGACCTCC-TTC-CCGGGTCTCC 5'& |||| ..| ||.||||.|| &5' ---GGAGCAGGGAGGTCCAGGGG 3' |
Map3k11 | mmu-miR-330 | beg:83 | end:106 | pic:3' CGGATTCTGTGTCCGGGTCTCT 5'& |||| .| |||||.|| &5' GCCTTGGTTTCC--CCCAGGGA 3' |
Map3k11 | mmu-miR-331-5p | beg:212 | end:241 | pic:3' CCTAGG-GACCCTGG-------TATGGATC 5'& || |||||.|| .||||||| &5' ----CCACTGGGGCCTGACACTGTACCTAG 3' |
Map3k11 | mmu-miR-345-5p | beg:107 | end:127 | pic:3' TTCGTGACCT---GATCCCCAGTCG 5'& ||| .|.|||||||| &5' -----CTGACCCTTTGGGGGTCAG- 3' |
Map3k11 | mmu-miR-34c | beg:436 | end:453 | pic:3' CGTTAGTCGATTGATGTGACGGA 5'& || .| .|||||| &5' -------GCCT-TTCTACTGCC- 3' |
Map3k11 | mmu-miR-351 | beg:247 | end:273 | pic:3' GTCCGAGTTTCCCGAGGAGTCCCT 5'& ||| ||.|| .|||||||| &5' -AGGACCAGAGCCTGTCTCAGGGA 3' |
Map3k11 | mmu-miR-378 | beg:292 | end:312 | pic:3' GGAAGACTGAGG---TTCAGGTCA 5'& |. | |.|||||| &5' ------GGAGCAGGGAGGTCCAG- 3' |
Map3k11 | mmu-miR-378star | beg:107 | end:129 | pic:3' TGTGTCCTGGA----CCTCAGTCCTC 5'& |||| ||.||||||| &5' ------GACCCTTTGGGGGTCAGGA- 3' |
Map3k11 | mmu-miR-449a | beg:433 | end:453 | pic:3' TGGTCGATTGTTATGTGACGGT 5'& .| |. | | .|||||| &5' ---GGGTGCCTTTCTACTGCC- 3' |
Map3k11 | mmu-miR-449b | beg:119 | end:141 | pic:3' CGGTCGATTGT--TGTGACGGA 5'& |.||| |||| ||||||| &5' GTCAGG-AACACTACACTGC-- 3' |
Map3k11 | mmu-miR-449c | beg:436 | end:453 | pic:3' GGTCGATCGTTAC-GTGACGGA 5'& || .|||||| &5' -------GCCTTTCTACTGCC- 3' |
Map3k11 | mmu-miR-469 | beg:302 | end:323 | pic:3' CCTGT-GGTTCTAGTTACTTTCTCCGT 5'& || . |||.|. |||||.||| &5' -GAGGTCCAGGG-----GAAAGGGGC- 3' |
Map3k11 | mmu-miR-470 | beg:364 | end:385 | pic:3' TGAGTGGTCACGGTCAGGTTCTT 5'& | .|| ||.| ||||||. &5' --TGGCCCCTGTC--TCCAAGG- 3' |
Map3k11 | mmu-miR-484 | beg:244 | end:264 | pic:3' TAGCCCTCC-CCTGA-CTCGGACT 5'& ||| |||| ||||||| &5' ------AGGAGGACCAGAGCCTG- 3' |
Map3k11 | mmu-miR-493 | beg:136 | end:155 | pic:3' GGACCGTGTGTCATCCTGGAAGT 5'& .||||| .|||||| &5' ------GCACAGAAA-GCCTTCA 3' |
Map3k11 | mmu-miR-542-5p | beg:194 | end:206 | pic:3' AGCACTGTACTACTAGGGGCTC 5'& || |||.|| &5' ------------GACCCCTGA- 3' |
Map3k11 | mmu-miR-615-5p | beg:92 | end:110 | pic:3' CTAGGCTCGTGGCCCCTGGGGG 5'& ||| | || |||||.|. &5' --TCC---C-CCAGGGACTCT- 3' |
Map3k11 | mmu-miR-615-5p | beg:179 | end:204 | pic:3' CTAGGCTCG-TGGC--CCCTGGGGG 5'& || ||.| ||||||||. &5' ---CCTACAAACTGTAGGGACCCCT 3' |
Map3k11 | mmu-miR-667 | beg:316 | end:338 | pic:3' GAACCCGACCCACCGTCCACAGT 5'& |||||| ||||||||| &5' ---GGGCTGACCT-CAGGTGTCA 3' |
Map3k11 | mmu-miR-670 | beg:277 | end:298 | pic:3' AAGTGGTGTATGTGA-GTCCCTA 5'& ||| . .|. |||||| &5' ----CCAGGAGCGGAGCAGGGA- 3' |
Map3k11 | mmu-miR-670 | beg:288 | end:305 | pic:3' AAGTGGTGTATGTGAGTCCCTA 5'& .|| |||||| &5' ------GCAGGGAG-CAGGGA- 3' |
Map3k11 | mmu-miR-670 | beg:97 | end:106 | pic:3' AAGTGGTGTATGTGAGTCCCTA 5'& |||||| &5' ---------------CAGGGA- 3' |
Map3k11 | mmu-miR-670 | beg:250 | end:273 | pic:3' AAGTGGTGTATGT--GAGTCCCTA 5'& |||| | | |||||||| &5' ---ACCAGAGCCTGTCTCAGGGA- 3' |
Map3k11 | mmu-miR-673-3p | beg:386 | end:412 | pic:3' CCACGTGT-CTTGA--GTCGGGGCCT 5'& |. |.|| || |||.||| &5' ---GTTCCTGGACCCCCAACCCTGGA 3' |
Map3k11 | mmu-miR-675-5p | beg:360 | end:382 | pic:3' TGACACCCGGGAAAGGCGTGGT 5'& ||||||| |||| ||. ||| &5' ACTGTGGCCCCTGTCT---CCA 3' |
Map3k11 | mmu-miR-677 | beg:140 | end:162 | pic:3' AGTC-TTCGATTAGTAGTGACTT 5'& ||| |||| ||| |||||.| &5' -CAGAAAGCCT-TCA-CACTGGA 3' |
Map3k11 | mmu-miR-677 | beg:38 | end:60 | pic:3' AGTCTTCG-ATTAGTA-GTGACTT 5'& .||.|| ||. ||| |||||.| &5' --GGAGGCATAG-CATACACTGGA 3' |
Map3k11 | mmu-miR-682 | beg:121 | end:142 | pic:3' GTCTGAAGTGACACTGACGTC 5'& |||. |||| |||||| &5' CAGGAA-CACTAC-ACTGCA- 3' |
Map3k11 | mmu-miR-693-5p | beg:67 | end:87 | pic:3' CTTTTGAAAGCCT------ACACCGAC 5'& ||| |||||||| &5' ----------GGAGGCCTCTGTGGCTG 3' |
Map3k11 | mmu-miR-704 | beg:243 | end:267 | pic:3' GATCCTC---GTCTCGTGTACAGA 5'& |||||| |||||| | ||||| &5' -TAGGAGGACCAGAGC-C-TGTCT 3' |
Map3k11 | mmu-miR-705 | beg:164 | end:187 | pic:3' ACGG-GTGGGGTGGA-GGGTGG 5'& ||. |||||||| ||.|| &5' -GCTACACCCCACATGCCTAC- 3' |
Map3k11 | mmu-miR-720 | beg:67 | end:84 | pic:3' ACCTCCGGGGTCGCTCTA 5'& |||||||.| |.|. &5' -GGAGGCCTCTGTGG--- 3' |
Map3k11 | mmu-miR-744 | beg:436 | end:455 | pic:3' ACGACAATCGGGAT-----CGGGGCGT 5'& |||.| ||||||| &5' --------GCCTTTCTACTGCCCCGC- 3' |
Map3k11 | mmu-miR-763 | beg:226 | end:245 | pic:3' CGGTGACCAAGAAGGGTCGACC 5'& ||||| ||.|||||| &5' --CACTGTA----CCTAGCTGG 3' |
Map3k11 | mmu-miR-450a-3p | beg:505 | end:519 | pic:3' TACTTACGTTTCGTAGGGGTTA 5'& || |. ||||||| &5' ------GCT--GTCTCCCCAA- 3' |