SNP - dbSNP |
dbSNP | Type | Alleles | Het | Se(het) | Fxn-class | Gene Name | Assembly | Chr-pos | Sequence | Entrez Gene |
rs3159850 | snp | A/G | | | intron-variant, upstream-variant-2KB | Ikbkg, G6pdx | Mm_Celera | X:74427929 | CCACAAGTTCTACTA[A/G]GTTGAACTCTATGGC | 16151 |
rs3163660 | snp | C/T | | | intron-variant, upstream-variant-2KB | Ikbkg, G6pdx | Mm_Celera | X:74428476 | CCCACAGTGGATGTC[C/T]TAGGTGAATTATATT | 16151 |
rs3163661 | snp | A/G | | | intron-variant, upstream-variant-2KB | Ikbkg, G6pdx | Mm_Celera | X:74428036 | GTGAGTCTCCCTTCA[A/G]GCCCCGAGTCTAAAA | 16151 |
rs3163662 | snp | C/T | | | downstream-variant-500B | Ikbkg | Mm_Celera | X:74456941 | AGACTCATATTCAAC[C/T]TGAAGACATTCATTA | 16151 |
rs6186566 | snp | C/T | 0.290657 | 0.246672 | intron-variant | Ikbkg | Mm_Celera | X:74439326 | ACCCATATTCATGTT[C/T]ACTACATGTCCTACA | 16151 |
rs6187681 | snp | C/T | 0.359862 | 0.224567 | intron-variant | Ikbkg | Mm_Celera | X:74439502 | CATCCTTTTGAGTTT[C/T]CTTTAATTTAGAACA | 16151 |
rs6201325 | snp | A/G | 0.290657 | 0.246672 | intron-variant | Ikbkg | Mm_Celera | X:74439792 | CTTATGGGACAAGAA[A/G]GAAGAAGGTAAAGTT | 16151 |
rs6225642 | snp | C/T | 0.5 | 0 | intron-variant | Ikbkg | Mm_Celera | X:74435380 | tttacatttcaaatg[C/T]tatccccagagcccc | 16151 |
rs6226251 | snp | A/T | 0.5 | 0 | intron-variant | Ikbkg | Mm_Celera | X:74435511 | agctacgagaataga[A/T]tttgttcagtaactg | 16151 |
rs6231337 | snp | A/C | 0.5 | 0 | intron-variant | Ikbkg | Mm_Celera | X:74396503 | TTCTTCTTCATTCCT[A/C]CCTCTCTCCCTCCCC | 16151 |
rs6231443 | snp | A/G | 0.5 | 0 | intron-variant | Ikbkg | Mm_Celera | X:74396570 | atacatgttgagatc[A/G]cagtagtgtgccact | 16151 |
rs6239456 | snp | C/G | 0.5 | 0 | intron-variant | Ikbkg | Mm_Celera | X:74435570 | agctctggtgatttg[C/G]agaggtgattgtgta | 16151 |
rs6239560 | snp | A/G/T | 0.5 | 0 | intron-variant | Ikbkg | GRCm38.p3 | X:74435631 | gggtttctctgtgta[A/G/T]ctctggctgtcctgg | 16151 |
rs6240071 | snp | A/G | 0.5 | 0 | intron-variant | Ikbkg | Mm_Celera | X:74435729 | ggattaaaggcgtgc[A/G]ccaccactgccnggc | 16151 |
rs6240082 | snp | C/T | 0.5 | 0 | intron-variant | Ikbkg | Mm_Celera | X:74435741 | tgcnccaccactgcc[C/T]ggcTTACCTTTTTTT | 16151 |
rs6240505 | snp | C/T | 0.5 | 0 | intron-variant | Ikbkg | Mm_Celera | X:74435772 | AAGAtttatttttac[C/T]tatgtgtttgggtgt | 16151 |
rs6309508 | snp | A/T | 0.5 | 0 | intron-variant | Ikbkg, G6pdx | Mm_Celera | X:74419262 | atggacacttagttt[A/T]ctctctccaatttcc | 16151 |
rs6407609 | snp | A/G | 0.5 | 0 | intron-variant | Ikbkg | Mm_Celera | X:74436584 | tcttctggtatgttt[A/G]aggagagctgcatat | 16151 |
rs6408265 | snp | A/G | 0.359862 | 0.224567 | intron-variant | Ikbkg | Mm_Celera | X:74436738 | CATATGGGTTTTGAA[A/G]CTCAAACTCTGGTCA | 16151 |
rs8238275 | snp | C/T | 0.310651 | 0.242531 | intron-variant, upstream-variant-2KB, utr-variant-5-prime | Ikbkg, G6pdx | GRCm38.p3 | X:74429715 | GGCGGTCACCCTTCC[C/T]TTCTCTGCAGTGGAA | 16151 |
rs8238276 | snp | C/T | 0.18 | 0.24 | intron-variant, upstream-variant-2KB | Ikbkg, G6pdx | GRCm38.p3 | X:74429647 | TCCGGAAGTAAAACA[C/T]AGACTCAAAGGCTTG | 16151 |
rs8238277 | snp | A/G | 0.197531 | 0.244432 | intron-variant, synonymous-codon, upstream-variant-2KB | Ikbkg, G6pdx | GRCm38.p3 | X:74429374 | ACTCGCCCCTACCCC[A/G]TTTTCAAGGCACCGC | 16151 |
rs8238278 | in-del | -/A | 0.444444 | 0.157135 | intron-variant, upstream-variant-2KB | Ikbkg, G6pdx | Mm_Celera | X:74428543 | ACACCCGAGTACGAT[-/A]NTATGGTCCCATATA | 16151 |
rs8238279 | in-del | -/C | 0.444444 | 0.157135 | intron-variant, upstream-variant-2KB | Ikbkg, G6pdx | Mm_Celera | X:74428542 | CACCCGAGTACGATN[-/C]TATGGTCCCATATAC | 16151 |
rs8238280 | snp | A/G | 0.32 | 0.24 | intron-variant, upstream-variant-2KB | Ikbkg, G6pdx | GRCm38.p3 | X:74428511 | AGAGTGTGATGCCGT[A/G]ACCAGATTTTATCTA | 16151 |
rs8238281 | snp | A/G | 0.32 | 0.24 | intron-variant, upstream-variant-2KB | Ikbkg, G6pdx | GRCm38.p3 | X:74428388 | GGCTGGAGCTCAGAG[A/G]CAGCAGTTTCTGAAT | 16151 |
rs13459934 | snp | A/G | | | intron-variant, utr-variant-3-prime | Ikbkg, G6pdx | Mm_Celera | X:74409518 | GCTAGAATTTTCCTA[A/G]CCCAACCCTGCCATT | 16151 |
rs13471344 | snp | A/G | 0.32 | 0.24 | utr-variant-3-prime | Ikbkg | Mm_Celera | X:74451229 | TTCCCCTTTCAAGGT[A/G]GGAGTTTGGAGAGAT | 16151 |
rs13471345 | snp | G/T | 0.231111 | 0.249285 | utr-variant-3-prime | Ikbkg | Mm_Celera | X:74451514 | GAAATAAAGAAGTAA[G/T]ACTTTCAAGCATGCA | 16151 |
rs13471930 | snp | C/T | 0.396694 | 0.202437 | upstream-variant-2KB, intron-variant, utr-variant-5-prime | Ikbkg, Fam3a | Mm_Celera | X:74393060 | TCTCCCTACACCCAG[C/T]CAACATCCTTGGCCC | 16151 |
rs13483826 | snp | C/T | 0.483471 | 0.0893938 | downstream-variant-500B | Ikbkg | GRCm38.p3 | X:74456942 | GACTCATATTCAACC[C/T]GAAGACATTCATTAA | 16151 |
rs29035554 | snp | C/T | 0.32 | 0.24 | intron-variant | Ikbkg | Mm_Celera | X:74439151 | TCAGAGAAGTAAGTG[C/T]CTGGGAGGCTTGGTA | 16151 |
rs29035555 | snp | C/T | 0.231111 | 0.249285 | synonymous-codon | Ikbkg | Mm_Celera | X:74438976 | ACAGCAGCAGCACAG[C/T]GTCCAGGTGGACCAG | 16151 |
rs29035556 | snp | A/T | 0.231111 | 0.249285 | intron-variant | Ikbkg | Mm_Celera | X:74438815 | GGACTAGAGCTAAAC[A/T]GTGAGTTGCACAGTA | 16151 |
rs29035557 | snp | G/T | 0.32 | 0.24 | intron-variant | Ikbkg | Mm_Celera | X:74438486 | TCCAGATCTGCCTTG[G/T]CAAAGTTGGGATGAT | 16151 |
rs29035558 | snp | A/C | 0.124444 | 0.216185 | intron-variant | Ikbkg | Mm_Celera | X:74438465 | AAAGGGGAGCAGGCC[A/C]AGTAGTCCAGATCTG | 16151 |
rs29035559 | snp | C/T | 0.32 | 0.24 | intron-variant | Ikbkg | Mm_Celera | X:74437382 | TCTGAAAGGAAGGAC[C/T]GAGTCTTTTTAGATT | 16151 |
rs29035560 | snp | C/T | 0.32 | 0.24 | intron-variant | Ikbkg | Mm_Celera | X:74434882 | CAAAGCATTTCATTC[C/T]TATCTGGGGAGACAG | 16151 |
rs29035561 | snp | C/T | 0.32 | 0.24 | intron-variant | Ikbkg | Mm_Celera | X:74434825 | CATAATCAAGTTTTA[C/T]ATTGTGGGACTAAGT | 16151 |
rs29035562 | snp | C/T | 0.32 | 0.24 | intron-variant | Ikbkg | Mm_Celera | X:74434765 | TGAGCAGGGATTGTA[C/T]CATCTGAGAGGACCA | 16151 |
rs29035563 | snp | C/T | 0.231111 | 0.249285 | synonymous-codon | Ikbkg | Mm_Celera | X:74433804 | TTCCCTGTCCCTAGA[C/T]GCTATCCGGCAGAGC | 16151 |
rs29035844 | snp | A/C/T | 0.32 | 0.24 | intron-variant | Ikbkg | Mm_Celera | X:74433772 | TGGCTGTTAGGACTC[A/C/T]TATCTCCTTTGCTGT | 16151 |
rs29035845 | snp | C/T | 0.32 | 0.24 | intron-variant | Ikbkg | Mm_Celera | X:74433699 | ATATCATCAGTGGAA[C/T]TGGCTAGGAATTGGT | 16151 |
rs29035846 | snp | C/T | 0.32 | 0.24 | intron-variant | Ikbkg | Mm_Celera | X:74433662 | ATCTCTGTTTAGTAA[C/T]GCATTCTAGACACTT | 16151 |
rs29035847 | snp | C/T | 0.124444 | 0.216185 | intron-variant | Ikbkg | Mm_Celera | X:74433190 | TTTAAGTAGGGTTCT[C/T]TGTGAAGAGTCACAT | 16151 |
rs29035848 | snp | C/G | 0.32 | 0.24 | intron-variant | Ikbkg | Mm_Celera | X:74433148 | CAAGAACCATCCAGA[C/G]TTTCAAACTTAGCTA | 16151 |
rs29035849 | snp | A/C | 0.32 | 0.24 | intron-variant | Ikbkg | Mm_Celera | X:74433123 | GCAGGATATGAGGTC[A/C]TGATGTGCCCAAGAA | 16151 |
rs29035850 | snp | C/T | 0.32 | 0.24 | intron-variant | Ikbkg | Mm_Celera | X:74433091 | CAAAGCTTATTGTCA[C/T]CTGCATCTTGTAATT | 16151 |
rs29035851 | snp | C/T | 0.124444 | 0.216185 | intron-variant | Ikbkg | Mm_Celera | X:74432729 | AGACAAAATGTCCAT[C/T]CTTTTGCTGTGAATG | 16151 |
rs29035852 | snp | A/C | 0.124444 | 0.216185 | intron-variant | Ikbkg | Mm_Celera | X:74432610 | GTGTGTGGAGGAGGT[A/C]GGATTCCCAGTTTAC | 16151 |
rs29035853 | snp | A/C | 0.32 | 0.24 | intron-variant, upstream-variant-2KB, utr-variant-5-prime | Ikbkg, G6pdx | Mm_Celera | X:74430225 | TTTAAAAAGTTTTCA[A/C]GTGTACCTTCACAAC | 16151 |
rs29036104 | snp | C/G | 0.231111 | 0.249285 | intron-variant, upstream-variant-2KB, utr-variant-5-prime | Ikbkg, G6pdx | Mm_Celera | X:74430029 | AGGGCTTGGCCCCTA[C/G]TGCTAGAACTCTTTA | 16151 |
rs29036105 | snp | A/G | 0.231111 | 0.249285 | intron-variant, utr-variant-5-prime, upstream-variant-2KB | Ikbkg, G6pdx | Mm_Celera | X:74429353 | CTTGGGTGTTTTAGT[A/G]CGGATGCGGTGCCTT | 16151 |
rs29036106 | snp | A/G | 0.231111 | 0.249285 | intron-variant, upstream-variant-2KB, utr-variant-5-prime | Ikbkg, G6pdx | GRCm38.p3 | X:74429089 | CAAAGTCTTGTCATA[A/G]GTGCAGCTCCACACA | 16151 |
rs29036107 | snp | C/T | 0.124444 | 0.216185 | intron-variant, upstream-variant-2KB | Ikbkg, G6pdx | Mm_Celera | X:74428411 | CTCCAGCCATAACCT[C/T]CAAAGTTGCCTTCGC | 16151 |
rs29036108 | snp | G/T | 0.124444 | 0.216185 | intron-variant, upstream-variant-2KB | Ikbkg, G6pdx | Mm_Celera | X:74427744 | CTGATTGCACATCAG[G/T]TTTTTTTTTTCATCC | 16151 |
rs29036109 | snp | G/T | 0.231111 | 0.249285 | intron-variant, upstream-variant-2KB | Ikbkg, G6pdx | Mm_Celera | X:74426986 | TCTGCATTCCTTTTC[G/T]AAGTTCTGCCACTCC | 16151 |
rs29036110 | snp | C/G | 0.124444 | 0.216185 | intron-variant, upstream-variant-2KB | Ikbkg, G6pdx | Mm_Celera | X:74426666 | ATCTTCGATGACTGG[C/G]TTATTGTTGCTGCAT | 16151 |
rs29036111 | snp | A/G | 0.32 | 0.24 | intron-variant, upstream-variant-2KB | Ikbkg, G6pdx | Mm_Celera | X:74426523 | TAGGATAAAGCCAGA[A/G]AAGCTGCCTGGTTTT | 16151 |
rs29036112 | snp | A/G | 0.231111 | 0.249285 | intron-variant, upstream-variant-2KB | Ikbkg, G6pdx | Mm_Celera | X:74426423 | CGGGTTCTTACTCCC[A/G]GAGCAGAGGAGAGCA | 16151 |
rs29036113 | snp | G/T | 0.231111 | 0.249285 | intron-variant, upstream-variant-2KB | Ikbkg, G6pdx | Mm_Celera | X:74426331 | ACAGAAAGAAACAAT[G/T]ATGCTTTTTAGAAAA | 16151 |
rs29036344 | snp | G/T | 0.231111 | 0.249285 | intron-variant, upstream-variant-2KB | Ikbkg, G6pdx | Mm_Celera | X:74426301 | TGTCTCTCTCTCTCA[G/T]GACCTCTGAGAGGAA | 16151 |
rs29036345 | snp | A/G | 0.124444 | 0.216185 | intron-variant, upstream-variant-2KB | Ikbkg, G6pdx | Mm_Celera | X:74426283 | CTAAGCATAGGGTCT[A/G]TCTGTCTCTCTCTCT | 16151 |
rs29036346 | snp | C/T | 0.32 | 0.24 | intron-variant | Ikbkg, G6pdx | Mm_Celera | X:74425579 | GGCCCATAGTGAGCT[C/T]ATCTGCCCATGTGGA | 16151 |
rs29036347 | snp | C/G | 0.231111 | 0.249285 | intron-variant | Ikbkg, G6pdx | Mm_Celera | X:74425047 | AAGAGACCCTGAGTA[C/G]CACTTGGTCTATAGT | 16151 |
rs29036348 | snp | A/C | 0.124444 | 0.216185 | intron-variant | Ikbkg, G6pdx | Mm_Celera | X:74424774 | AGGGATGGGATCACC[A/C]TGTCTTTCCTGTTGG | 16151 |
rs29036349 | snp | A/G | 0.124444 | 0.216185 | upstream-variant-2KB, intron-variant | Ikbkg, G6pdx | Mm_Celera | X:74424421 | ACTCTGGAAAGGACT[A/G]GCTTGCTGGGAACTA | 16151 |
rs29036350 | snp | G/T | 0.32 | 0.24 | upstream-variant-2KB, intron-variant | Ikbkg, G6pdx | Mm_Celera | X:74424339 | CTCAATGCCTGCCTC[G/T]ATGATCTTCCATCAG | 16151 |
rs29036351 | snp | C/T | 0.132653 | 0.220748 | upstream-variant-2KB, intron-variant | Ikbkg, G6pdx | Mm_Celera | X:74424255 | TAGGTCCCACAAAGC[C/T]CAGCATAGACAAGTC | 16151 |
rs29036352 | snp | A/G | 0.277778 | 0.248452 | upstream-variant-2KB, intron-variant | Ikbkg, G6pdx | Mm_Celera | X:74424167 | CATGGCCACCTGAGT[A/G]GCCTAATTACTGTCC | 16151 |
rs29036353 | snp | C/T | 0.32 | 0.24 | upstream-variant-2KB, intron-variant | Ikbkg, G6pdx | Mm_Celera | X:74423972 | AGTCCTGAGCATTGG[C/T]GAGTGGGTTCCTATG | 16151 |
rs29036508 | snp | A/G | 0.244898 | 0.249948 | downstream-variant-500B | Ikbkg | Mm_Celera | X:74457123 | CTCTAACCTCCTTTA[A/G]TTCTGAATCAATAAT | 16151 |
rs29036509 | snp | C/G | 0.132653 | 0.220748 | downstream-variant-500B | Ikbkg | Mm_Celera | X:74457015 | CAGGAAACACAGCCA[C/G]CAAGGTATATAATTA | 16151 |
rs29036510 | snp | A/G | 0.244898 | 0.249948 | utr-variant-3-prime | Ikbkg | Mm_Celera | X:74456640 | TTCTGTAGTTCTTCT[A/G]GCTAACCATTTTTCT | 16151 |
rs29036511 | snp | A/G | 0.244898 | 0.249948 | utr-variant-3-prime | Ikbkg | Mm_Celera | X:74456513 | TACCATTTAGGCTGT[A/G]AATGTACTTAGATAG | 16151 |
rs29036512 | snp | C/G | 0.132653 | 0.220748 | utr-variant-3-prime | Ikbkg | Mm_Celera | X:74456344 | CCTGCACCACCACTG[C/G]TTGGCAAACTTATCT | 16151 |
rs29036513 | snp | A/C | 0.132653 | 0.220748 | utr-variant-3-prime | Ikbkg | Mm_Celera | X:74456069 | GAAGAACCTAAGTAG[A/C]TCTGAGGATGTTTAT | 16151 |
rs29036594 | snp | G/T | 0.124444 | 0.216185 | upstream-variant-2KB, intron-variant | Ikbkg, G6pdx | Mm_Celera | X:74423904 | ACCCTAACACCCTGT[G/T]TTGGCATGAGCGAGC | 16151 |
rs29036595 | snp | G/T | 0.32 | 0.24 | upstream-variant-2KB, intron-variant | Ikbkg, G6pdx | Mm_Celera | X:74423688 | CAAACAAAAGAGAGT[G/T]AACCATGTAGCTGCA | 16151 |
rs29036596 | snp | C/G | 0.124444 | 0.216185 | upstream-variant-2KB, intron-variant | Ikbkg, G6pdx | Mm_Celera | X:74422878 | GGCTGGGATCACCAT[C/G]ACCTGGAAAGATGCT | 16151 |
rs29036597 | snp | A/C | 0.32 | 0.24 | intron-variant | Ikbkg, G6pdx | Mm_Celera | X:74422439 | AGAAGAAGGGGCAGA[A/C]ATGACTACCAATCTC | 16151 |
rs29036598 | snp | C/G/T | 0.231111 | 0.249285 | intron-variant | Ikbkg, G6pdx | Mm_Celera | X:74422323 | CTAGCCATAAGTTCA[C/G/T]CATCCTCATTTCCAA | 16151 |
rs29036599 | snp | C/T | 0.124444 | 0.216185 | intron-variant | Ikbkg, G6pdx | Mm_Celera | X:74422116 | TCAAGTGTTAGGCAA[C/T]GGGTTTGATCTGTAA | 16151 |
rs29036600 | snp | A/G | 0.124444 | 0.216185 | intron-variant | Ikbkg, G6pdx | Mm_Celera | X:74420042 | TATCCAGTATTATGA[A/G]ACAAAAGAAACGAAG | 16151 |
rs29036601 | snp | A/T | 0.32 | 0.24 | intron-variant | Ikbkg, G6pdx | Mm_Celera | X:74418907 | CATTCAAAATGGGGT[A/T]CTGAGCCGGGCGTGG | 16151 |
rs29036602 | snp | C/T | 0.142012 | 0.225474 | intron-variant | Ikbkg, G6pdx | Mm_Celera | X:74417110 | TCTGAAGTAAATTTC[C/T]CCTGAAGACAGAATA | 16151 |
rs29036603 | snp | C/T | 0.231111 | 0.249285 | intron-variant | Ikbkg, G6pdx | Mm_Celera | X:74417109 | CTCTGAAGTAAATTT[C/T]CCCTGAAGACAGAAT | 16151 |
rs29036754 | snp | A/G | 0.244898 | 0.249948 | utr-variant-3-prime | Ikbkg | Mm_Celera | X:74455949 | TAAAACAACTAGGAT[A/G]TTCATAAGGTACATC | 16151 |
rs29036755 | snp | C/T | 0.165289 | 0.235211 | utr-variant-3-prime | Ikbkg | Mm_Celera | X:74455868 | TTGGTTTTTTTTTTT[C/T]CCCACTGAGACATCT | 16151 |
rs29036756 | snp | A/G | 0.244898 | 0.249948 | downstream-variant-500B, utr-variant-3-prime | Ikbkg | Mm_Celera | X:74454241 | GGGAAAGAAGAGACC[A/G]CCTAGGCACAGCAGC | 16151 |
rs29036757 | snp | C/T | 0.244898 | 0.249948 | utr-variant-3-prime | Ikbkg | Mm_Celera | X:74453777 | CATTTAAAATGTTAT[C/T]TAAGCCCTGCAGTTT | 16151 |
rs29036758 | snp | C/T | 0.32 | 0.24 | utr-variant-3-prime | Ikbkg | Mm_Celera | X:74452923 | TACCACTGACCTTTT[C/T]TAGTGTTTTTTTCTT | 16151 |
rs29036759 | snp | A/T | 0.32 | 0.24 | utr-variant-3-prime | Ikbkg | Mm_Celera | X:74452818 | TTTGTACTGTTGACT[A/T]CTTTTTGTCATCCAT | 16151 |
rs29036760 | snp | A/C | 0.231111 | 0.249285 | utr-variant-3-prime | Ikbkg | Mm_Celera | X:74452429 | TCTGTTACTTGAGAC[A/C]TAAACTCCATCTTCA | 16151 |
rs29036761 | snp | C/T | 0.32 | 0.24 | utr-variant-3-prime | Ikbkg | Mm_Celera | X:74452229 | TAGTTATGAGAGAAG[C/T]TGTTTGATGTTCAAT | 16151 |
rs29036762 | snp | A/G | 0.32 | 0.24 | utr-variant-3-prime | Ikbkg | Mm_Celera | X:74451195 | ACCCTCAGGCAAGGT[A/G]AGGCCTACCTTTTAG | 16151 |
rs29036763 | snp | C/T | 0.32 | 0.24 | utr-variant-3-prime | Ikbkg | Mm_Celera | X:74450888 | ACTGGAAAAAGTGGT[C/T]GTTCCATTCCCCTCA | 16151 |
rs29036804 | snp | A/C | 0.231111 | 0.249285 | intron-variant | Ikbkg, G6pdx | Mm_Celera | X:74416261 | CAAACCAAACTAAAC[A/C]ACCAAAACAAGAAAG | 16151 |
rs29036805 | snp | A/G | 0.244898 | 0.249948 | intron-variant | Ikbkg, G6pdx | Mm_Celera | X:74414846 | GGGATGCCTGGAGCT[A/G]GTCTTGCTGTGGAGT | 16151 |
rs29036806 | snp | A/G | 0.244898 | 0.249948 | intron-variant | Ikbkg, G6pdx | Mm_Celera | X:74414831 | GACATGTCTTCTCAA[A/G]GGATGCCTGGAGCTA | 16151 |