DNA & RNA Element - AREsite Gene Name Motif CDS Area ARE Area Evidence Usp40 ATTTA 134-3574 4249-4253

DNA & RNA Element - miRTarBase Target Gene (Entrez ID) miRTarBase ID miRNA Species (miRNA) Target Gene Species (Target Gene) Experiments Support Type References (PMID) MIRT013797 mmu-miR-24-3p Mus musculus Usp40 227334 Mus musculus Sequencing Functional MTI (Weak) 19536157 MIRT011166 mmu-miR-26a-5p Mus musculus Usp40 227334 Mus musculus Sequencing Functional MTI (Weak) 19536157 MIRT577398 mmu-miR-3067-5p Mus musculus Usp40 227334 Mus musculus HITS-CLIP Functional MTI (Weak) 25083871 MIRT577398 mmu-miR-3067-5p Mus musculus Usp40 227334 Mus musculus HITS-CLIP Functional MTI (Weak) 21258322

DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0003473 mmu-miR-133a* 227334 Usp40 uaaaCCAAGGU--AA-AAUGGUCg ||| :|| || ||||||| ucagGGUAUCAGUUUCUUACCAGc 2 18 787 810 [mm9:1:89842361-89842384:-] 0.5024 151 7 -18.68 -0.3626 MIMAT0000154 mmu-miR-142-5p 227334 Usp40 ucaucacgaaagaUGAAAUAc ||||||| gaaaaacacuaagACUUUAUu 2 9 1417 1437 [mm9:1:89841734-89841754:-] 0.5216 140 7 -5.67 -0.8564 MIMAT0004542 mmu-miR-191* 227334 Usp40 ccCUUGCUUUA---GGUUCACG-UCg ||| || || :||||||| || caGAA-GACAUGCCUCAAGUGCUAGc 2 21 1300 1324 [mm9:1:89841847-89841871:-] 0.5277 121 0 -16.87 -0.1885 MIMAT0004572 mmu-miR-290-3p 227334 Usp40 cccgaAUUUUGAUCC--GCCGUGAAa ||:: ||| :||||||| ugugaUAGGCGAAGGGAUGGCACUUc 2 20 126 151 [mm9:1:89843020-89843045:-] 0.5270 146 7 -17.90 -0.2666 MIMAT0000370 mmu-miR-292-3p 227334 Usp40 ugugaGUUUUGGACCGCCGUGAAa |:||: | :||||||| auaggCGAAG--GGAUGGCACUUc 2 20 130 151 [mm9:1:89843020-89843041:-] 0.5270 144 7 -17.36 -0.2666 MIMAT0004617 mmu-miR-148a* 227334 Usp40 ucaGCCUCACAGAGUCU-UGAAa :| | | |||||| |||| ugaUGUACUAGCUCAGACACUUu 2 20 1228 1250 [mm9:1:89841921-89841943:-] 0.5277 123 0 -13.33 -0.1636 MIMAT0004630 mmu-miR-26b* 227334 Usp40 cucgguucauuACCUCUUGUCc |||||||||| guguguguguuUGGAGAACAGa 2 12 1381 1402 [mm9:1:89841769-89841790:-] 0.5247 155 7 -18.37 -0.4958 MIMAT0004631 mmu-miR-29a* 227334 Usp40 gacuuGUGGUUUUCUUUA-GUCa :| || || |||| ||| aagccUAGCACAACAAAUCCAGg 2 18 578 600 [mm9:1:89842571-89842593:-] 0.5024 121 0 -8.04 -0.1395 MIMAT0004636 mmu-miR-93* 227334 Usp40 gcccuucacGAUCGAGUCGUCa | | :||||||| ---------CAACUUCAGCAGa 2 14 1 13 [mm9:1:89882426-89882438:-] 0.4507 145 7 -11.78 -0.2655 MIMAT0000549 mmu-miR-322* 227334 Usp40 cacAAC-GUCGCGA----AGUACAAa ||| ||| |:| ||||||| cauUUGCCAGAGUUGAUGUCAUGUUa 2 19 987 1012 [mm9:1:89842159-89842184:-] 0.5024 148 7 -11.79 -0.2979 MIMAT0004647 mmu-miR-338-5p 227334 Usp40 gugagucgUGGUCCUAUAACAa || || ||||||| aaacuaaaACAAGUAUAUUGUg 2 15 86 107 [mm9:1:89882332-89882353:-] 0.4908 154 7 -10.64 -0.4522 MIMAT0000586 mmu-miR-340-3p 227334 Usp40 cgAUAUUUCA---UUGACUCUGCCu |||: | | : | ||||||| ccUAUGCACUCUGGCCAGAGACGGg 2 21 543 567 [mm9:1:89842604-89842628:-] 0.5024 143 7 -19.40 -0.1063 MIMAT0004660 mmu-miR-19a* 227334 Usp40 caUCACGUUG-AU-ACGUUUUGAu | | : || || | :|||||| guACUUUUACAUAUUUUAAAACUa 2 21 68 91 [mm9:1:89882348-89882371:-] 0.4609 130 6 -7.35 -0.2435 MIMAT0004663 mmu-miR-200c* 227334 Usp40 ggUUUGUGACGACCCAUUCUGc || :: ||: | ||||||| agAACUGAUGUGGUGUAAGACa 2 21 832 853 [mm9:1:89842318-89842339:-] 0.5024 156 7 -18.55 -0.6932 MIMAT0004663 mmu-miR-200c* 227334 Usp40 gguuugugacgacccAUUCUGc |||||| aacagggaaaaacacUAAGACu 2 8 1411 1432 [mm9:1:89841739-89841760:-] 0.5216 120 6 -9.28 -0.1300 MIMAT0004664 mmu-miR-214* 227334 Usp40 cgUGUCG--UUC--ACAUCUGUCCGu :|||| ||| ||| ||||||| cuGCAGCCUAAGUCUGUUGACAGGCc 2 21 1324 1349 [mm9:1:89841822-89841847:-] 0.5277 162 7 -20.87 -0.2335 MIMAT0004666 mmu-miR-33* 227334 Usp40 caCUACGUGACACCUUUGUAAc || || | ||||||| gaGACCCAAACAGUAAACAUUa 2 21 1114 1135 [mm9:1:89842036-89842057:-] 0.5079 144 7 -4.94 -0.5177 MIMAT0004666 mmu-miR-33* 227334 Usp40 cacuacgugacaccUUUGUAAc ||||||| uaaagaaaaaaauaAAACAUUc 2 9 1437 1458 [mm9:1:89841713-89841734:-] 0.5216 140 7 -3.94 -1.0448 MIMAT0001090 mmu-miR-409-3p 227334 Usp40 uccccaaguggcucgUUGUAAg |||||| uaaagaaaaaaauaaAACAUUc 2 8 1437 1458 [mm9:1:89841713-89841734:-] 0.5216 120 6 -7.49 -0.1371 MIMAT0001093 mmu-miR-411* 227334 Usp40 ccAAU-CACCUGGCACAAUGUAu ||| |||:: | |||||| uuUUACCUGGGUACUUUUACAUa 2 21 58 80 [mm9:1:89882359-89882381:-] 0.4609 127 6 -10.41 -0.1407 MIMAT0003409 mmu-miR-467a 227334 Usp40 gcgUAUAUG--UACGU-CCGUGAAu ||| :| | | | ||||||| gugAUAGGCGAAGGGAUGGCACUUc 2 20 127 151 [mm9:1:89843020-89843044:-] 0.5270 145 7 -13.41 -0.2666 MIMAT0003186 mmu-miR-369-3p 227334 Usp40 uuucuAGUUGGU--ACAUAAUAa | || || |||||||| ucuauUGAAGCACUUGUAUUAUa 2 17 1023 1045 [mm9:1:89842126-89842148:-] 0.5044 151 7 -7.95 -0.8537 MIMAT0003190 mmu-miR-291b-3p 227334 Usp40 ugUUUGUUUUACCUA-CGUGAAa |::|:||: |||| |||||| auAGGCGAAG-GGAUGGCACUUc 2 21 130 151 [mm9:1:89843020-89843041:-] 0.5270 134 6 -21.12 -0.2572 MIMAT0003373 mmu-miR-302b* 227334 Usp40 ucuuucguaaggguacAAUUUCa |||||| aaacacuaagacuuuaUUAAAGa 2 8 1420 1442 [mm9:1:89841729-89841751:-] 0.5216 120 6 -4.47 -0.2187 MIMAT0003375 mmu-miR-302c* 227334 Usp40 cguccAUUGGGGUACAAUUUCg ||| |: | |||||| aacacUAAGACUUUAUUAAAGa 2 18 1421 1442 [mm9:1:89841729-89841750:-] 0.5216 125 6 -8.74 -0.2147 MIMAT0003376 mmu-miR-302c 227334 Usp40 ggUGACUUUG-UACCUUCGUGAa ||||| | || |||||||| ugACUGAUUCUAUUGAAGCACUu 2 21 1015 1037 [mm9:1:89842134-89842156:-] 0.5044 167 7 -20.77 -0.3743 MIMAT0005460 mmu-miR-1224 227334 Usp40 gaGGUGGAGGGGUCAGGAGUg ||| :|::|||||||||| ucCCAGUUUUCCAGUCCUCAc 2 20 423 443 [mm9:1:89842728-89842748:-] 0.5024 175 7 -34.71 -0.2815 MIMAT0003736 mmu-miR-670 227334 Usp40 aaGUGGUGUAUG-UGAGUCCCUa || |:| || | |||||| aaCAGAAUAGACAAAACAGGGAa 2 21 1397 1419 [mm9:1:89841752-89841774:-] 0.5216 123 6 -16.79 -0.1324 MIMAT0003895 mmu-miR-764-3p 227334 Usp40 ugucaacggUGAUACCGGAGGa |||: ||||||| cuuggggaaACUGAGGCCUCCu 2 14 612 633 [mm9:1:89842538-89842559:-] 0.5024 153 7 -23.91 -0.2209 MIMAT0014815 mmu-miR-3099* 227334 Usp40 guucccgaccuucCUUCGACc ||||||| cuggcaccuuacuGAAGCUGc 2 9 375 395 [mm9:1:89842776-89842796:-] 0.5024 140 7 -11.83 -0.3383 MIMAT0004823 mmu-miR-666-3p 227334 Usp40 ucGUCCGCUAGUGCGACGUCGg || |:| | | |||||||| cuCAAGUGCU-A-GCUGCAGCc 2 21 1312 1331 [mm9:1:89841840-89841859:-] 0.5277 152 7 -22.35 -0.1224 MIMAT0004823 mmu-miR-666-3p 227334 Usp40 ucguccgcuaguGCGACGUCGg | ||||||| -----------cCCCUGCAGCa 2 11 1 11 [mm9:1:89843160-89843170:-] 0.5419 142 7 -12.91 -0.2454 MIMAT0003739 mmu-miR-673-5p 227334 Usp40 gagguuccuGGUCUCGA-CACUc ||| |||| |||| ugguugccuCCACAGCUAGUGAu 2 14 87 109 [mm9:1:89843062-89843084:-] 0.5270 121 0 -14.93 -0.1335 MIMAT0003449 mmu-miR-488* 227334 Usp40 aacucUCACGAUAAUA-GACCc :|||| : ||| |||| uuucuGGUGCAGCUAUGCUGGc 2 17 907 928 [mm9:1:89842243-89842264:-] 0.5024 120 0 -12.25 -0.1735 MIMAT0003470 mmu-miR-691 227334 Usp40 aaaagacGGAGAG-AAGUCCUUa |:|: | |||||||| ucagacaCUUUGCUUUCAGGAAg 2 16 1240 1262 [mm9:1:89841909-89841931:-] 0.5277 150 7 -14.44 -0.1126 MIMAT0004189 mmu-miR-693-3p 227334 Usp40 aaUGUCGGUGUAGACUUU-CGACg :||| ||:: :| ||| |||| caGCAGACAUGCUUCAAAUGCUGc 2 22 7 30 [mm9:1:89882409-89882432:-] 0.4769 129 0 -17.42 -0.1995 MIMAT0003476 mmu-miR-669b 227334 Usp40 uguaCGUGU-ACGUGUGUUUUGa | ||| :| ||||||| uggaGAACAGAAUAGACAAAACa 2 19 1392 1414 [mm9:1:89841757-89841779:-] 0.5216 145 7 -10.61 -0.5420 MIMAT0003487 mmu-miR-697 227334 Usp40 agaGGUG-UCCUGGUCCUACAa |::| |||| ||||||| aagCUGCAAGGA--AGGAUGUg 2 19 389 408 [mm9:1:89842763-89842782:-] 0.5024 150 7 -18.79 -0.1726 MIMAT0003494 mmu-miR-704 227334 Usp40 gauccucgucucGUGUACAGa :||||||| cuuaccagcuuuUACAUGUCu 2 10 802 822 [mm9:1:89842349-89842369:-] 0.5024 141 7 -14.86 -0.5316 MIMAT0003498 mmu-miR-708* 227334 Usp40 gaucuUCGAGUGUCAGAUCAAc ||:| :: ||||||| ugaccAGUUAGUCAUCUAGUUc 2 18 354 375 [mm9:1:89842796-89842817:-] 0.5024 149 7 -11.19 -0.1602 MIMAT0003500 mmu-miR-710 227334 Usp40 gaguugagaGGGGUUCUGAAcc | |:||||||| agggaaaaaCACUAAGACUUua 3 14 1414 1435 [mm9:1:89841736-89841757:-] 0.5216 133 0 -10.82 -0.1721 MIMAT0003500 mmu-miR-710 227334 Usp40 gaGUUGAGAGGGGUUC-UGAACc ::|:||| :: ||| ||||| acUGAUUCUAUUGAAGCACUUGu 2 21 1017 1039 [mm9:1:89842132-89842154:-] 0.5044 128 0 -15.90 -0.8097 MIMAT0003510 mmu-miR-717 227334 Usp40 ucUCUUCCAUAGAGACA-GACUc :||||| || | ||| |||| aaGGAAGG-AUGUGUGUCCUGAc 2 21 396 417 [mm9:1:89842754-89842775:-] 0.5024 130 0 -17.57 -0.1300 MIMAT0003512 mmu-miR-450b-3p 227334 Usp40 uacguacguuuUACAAGGGUUa :| ||||||| gcucuuccuuuGUCUUCCCAAc 2 12 963 984 [mm9:1:89842187-89842208:-] 0.5024 143 7 -8.90 -0.3192 MIMAT0004238 mmu-miR-743a 227334 Usp40 agauGAGUCGAACCACAGAAAg || | || ||||||| cugcCUGAAGUU-CUGUCUUUu 2 19 27 47 [mm9:1:89882392-89882412:-] 0.5032 144 7 -12.62 -0.2259 MIMAT0004840 mmu-miR-743b-3p 227334 Usp40 agaUAAGUCGUACU-----ACAGAAAg || | || ||| ||||||| caaAUGCUGCCUGAAGUUCUGUCUUUu 2 20 21 47 [mm9:1:89882392-89882418:-] 0.5032 146 7 -11.02 -0.2259 MIMAT0004850 mmu-miR-883b-5p 227334 Usp40 acugacGAUGGGUAAGAGUCAu || |:| |||||||| ugaggcCUCCUCCUUCUCAGUc 2 17 623 644 [mm9:1:89842527-89842548:-] 0.5024 160 7 -17.53 -0.1151 MIMAT0004850 mmu-miR-883b-5p 227334 Usp40 acUGACGAUGGGUAAGAG-UCAu || |||| : | |||| ||| ccACAGCUAGUGA-UCUCAAGUc 2 21 96 117 [mm9:1:89843054-89843075:-] 0.5270 122 0 -11.65 -0.3074 MIMAT0004856 mmu-miR-105 227334 Usp40 ugguguucGUAGACUCGUGAACc :||: |||||||| acugauucUAUUGAAGCACUUGu 2 16 1017 1039 [mm9:1:89842132-89842154:-] 0.5044 151 7 -13.73 -0.8754 MIMAT0004863 mmu-miR-220 227334 Usp40 uucacaGACUGUGACACCACc |||| ||||||| acagaaCUGA---UGUGGUGu 2 16 830 847 [mm9:1:89842324-89842341:-] 0.5024 143 7 -15.23 -0.3534 MIMAT0004867 mmu-miR-327 227334 Usp40 uaggaGUACGGGGAGUUCa |||| ||||||| gaagaCAUG--CCUCAAGu 2 15 1302 1318 [mm9:1:89841853-89841869:-] 0.5277 147 7 -16.94 -0.1241 MIMAT0004933 mmu-miR-878-3p 227334 Usp40 agaugGGUCAC-ACCACAGUACg |||| | || ||||||| auuugCCAGAGUUGAUGUCAUGu 2 18 988 1010 [mm9:1:89842161-89842183:-] 0.5024 160 7 -20.76 -0.2824 MIMAT0004862 mmu-miR-877* 227334 Usp40 acccuccucccucUUCUCCUGu |||||||| ggcaaguugcucaAAGAGGACa 2 10 285 306 [mm9:1:89842865-89842886:-] 0.5024 145 7 -15.54 -0.8544 MIMAT0005830 mmu-miR-466l 227334 Usp40 uuauacacacguaCAUAAAUAu |||||||| uugaagagauuugGUAUUUAUg 2 10 660 681 [mm9:1:89842490-89842511:-] 0.5024 145 7 -8.03 -0.2205 MIMAT0005833 mmu-miR-669d 227334 Usp40 uguauAUGUACGUGUGU-GUUCa |::| :||||| |||| guccuUGUAGCUACACACCAAGa 2 18 1083 1105 [mm9:1:89842066-89842088:-] 0.5056 121 0 -12.79 -0.2762 MIMAT0005849 mmu-miR-1191 227334 Usp40 auCCCGAUGUAUCAUUCUGAc ||| | | | ||||||| caGGGAAAAACACUAAGACUu 2 20 1413 1433 [mm9:1:89841738-89841758:-] 0.5216 155 7 -14.81 -0.8635 MIMAT0005853 mmu-miR-669e 227334 Usp40 uacUUGUAC--GUGUGUG-UUCUGu |||| | | |||| ||||| caaAACAGGGAAAAACACUAAGACu 2 20 1408 1432 [mm9:1:89841739-89841763:-] 0.5216 122 0 -13.91 -1.1129 MIMAT0005858 mmu-miR-1197 227334 Usp40 ucUUCAUCUGGUACACAGGAu |:| ||: ::|||||||| caAGGAAGGAUGUGUGUCCUg 2 20 395 415 [mm9:1:89842756-89842776:-] 0.5024 163 7 -21.82 -0.2233 MIMAT0005860 mmu-miR-1199 227334 Usp40 ggCGCGCUGGCCCUGAGUCu || ||:|: ||||||| gaGC-CGGCUCAGACUCAGa 2 19 203 221 [mm9:1:89842950-89842968:-] 0.4839 152 7 -23.58 -0.3603 MIMAT0007872 mmu-miR-1906 227334 Usp40 ucgGGACGGAG-UC-CGA-CGACGu | |||||| || ||| ||||| agaCAUGCCUCAAGUGCUAGCUGCa 2 20 1304 1328 [mm9:1:89841843-89841867:-] 0.5277 133 0 -28.15 -0.1195 MIMAT0007874 mmu-miR-1904 227334 Usp40 ggagggaGGUCUCCUC-GUCUUg |::|||||| ||||| uuaguacCUGGAGGAGCCAGAAg 2 16 1283 1305 [mm9:1:89841866-89841888:-] 0.5277 131 0 -21.62 -0.2015 MIMAT0007875 mmu-miR-1898 227334 Usp40 cuagggGACACUUG----GAACUGGa | || ||| ||||||| cccaaaCAGUAAACAUUACUUGACCa 2 17 1118 1143 [mm9:1:89842028-89842053:-] 0.5079 143 7 -14.51 -0.9665 MIMAT0007876 mmu-miR-1907 227334 Usp40 ugGAGGUC--UAGGAGACGA-CGAg ||:||| | || ||||| ||| ggCUUCAGCUAGCCCCUGCUGGCUu 2 21 876 900 [mm9:1:89842271-89842295:-] 0.5024 131 0 -23.76 -0.1537 MIMAT0009406 mmu-miR-1941-3p 227334 Usp40 uaCCCUCUAUGACGAUUCUac |||| | || |||||| caGGGAAAAAC-ACUAAGAcu 3 20 1413 1432 [mm9:1:89841739-89841758:-] 0.5216 137 0 -12.27 -0.1033 MIMAT0009421 mmu-miR-669o 227334 Usp40 ugUAUUUGUACGUG---U-GUGUUGAu :||||||| :|| | ||||||| caGUAAACAU-UACUUGACCACAACUg 2 22 1124 1149 [mm9:1:89842022-89842047:-] 0.5079 157 7 -18.35 -0.1622 MIMAT0009433 mmu-miR-1960 227334 Usp40 ucggGAGAAGAU-UGUCGU-GACc |||| : | |||||| ||| cuagCUCUGUGACACAGCAGCUGc 2 19 178 201 [mm9:1:89842970-89842993:-] 0.5058 125 0 -20.17 -0.1065 MIMAT0009435 mmu-miR-1962 227334 Usp40 uacacAGGGUC--ACGGUC-GGAGa |||||| | |||| |||| uccauUCCCAGUUUUCCAGUCCUCa 2 18 418 442 [mm9:1:89842729-89842753:-] 0.5024 128 0 -24.18 -0.3405 MIMAT0009441 mmu-miR-1968 227334 Usp40 ucagGUGGUA-GGAAUUGUCGACGu | |::| | |:||||||| cuagCUCUGUGACACAGCAGCUGCa 2 21 178 202 [mm9:1:89842969-89842993:-] 0.5058 147 7 -19.19 -0.1575 MIMAT0009443 mmu-miR-1946b 227334 Usp40 uuuUCGUACACGGUGGUGACGGGCCg || | | |||:| ||||||| cucAGACUCAGACACUA-UGCCCGGa 2 24 210 234 [mm9:1:89842937-89842961:-] 0.4839 157 7 -23.54 -0.5484 MIMAT0009444 mmu-miR-1970 227334 Usp40 guuucgGAUAGGGGUCACUGUGu ||| |:|: ||||||| ugguuaCUAGCUCU-GUGACACa 2 18 172 193 [mm9:1:89842978-89842999:-] 0.5270 155 7 -20.86 -0.3748 MIMAT0011211 mmu-miR-2135 227334 Usp40 caAAGCCGGGGU--UCUGGAGa | :| || | ||||||| acUAUGCCCGGAAUAGACCUCu 2 19 223 244 [mm9:1:89842927-89842948:-] 0.4832 141 7 -20.15 -0.3190 MIMAT0011215 mmu-miR-2139 227334 Usp40 cgucaauGGUCCUCG-UCG-CGUCGa :|| | || ||| ||||| acaugccUCAAGUGCUAGCUGCAGCc 2 18 1306 1331 [mm9:1:89841840-89841865:-] 0.5277 120 0 -17.93 -0.2230 MIMAT0011216 mmu-miR-2140 227334 Usp40 ugGUGGUUCUAGA-CGUGGa ||:| || ||| ||||| guCAUCUAGUUCUGGCACCu 2 18 364 383 [mm9:1:89842788-89842807:-] 0.5024 129 0 -20.79 -0.1882 MIMAT0000133 mmu-miR-101a 227334 Usp40 aaguCAAUAGUGUCAUGACAu | |||: ||||||| auuuGGUAUUUAUGUACUGUa 2 18 668 688 [mm9:1:89842483-89842503:-] 0.5024 149 7 -15.18 -1.1201 MIMAT0000133 mmu-miR-101a 227334 Usp40 aaGUCAAUAGUGUCAUGACAu | ||| || : ||||||| uaCUGUU-UC-UUGUACUGUa 2 20 1168 1186 [mm9:1:89841985-89842003:-] 0.5277 147 7 -14.61 -0.7798 MIMAT0000156 mmu-miR-144 227334 Usp40 ucAUGUAGUAGAUAUGACAu |: || | ||||||| ucUGGAUACUGGAUACUGUu 2 19 1155 1174 [mm9:1:89841997-89842016:-] 0.5277 146 7 -8.95 -0.2112 MIMAT0000156 mmu-miR-144 227334 Usp40 ucaUGUAGUAGAUAUGACAu ::||: | |:|||||| uugGUAUU-UAUGUACUGUa 2 18 670 688 [mm9:1:89842483-89842501:-] 0.5024 135 6 -13.30 -0.1156 MIMAT0000159 mmu-miR-149 227334 Usp40 cccucacuucugugCCUCGGUCu |||||||| ucuuaguaccuggaGGAGCCAGa 2 10 1281 1303 [mm9:1:89841868-89841890:-] 0.5277 145 7 -20.96 -0.2750 MIMAT0000163 mmu-miR-153 227334 Usp40 cuagugaaaacacuGAUACGUu ||||||| guguuaucuaccacCUAUGCAc 2 9 530 551 [mm9:1:89842620-89842641:-] 0.5024 140 7 -9.76 -0.1103 MIMAT0000165 mmu-miR-155 227334 Usp40 ugGGGAUAGUGUUAAUCGUA-AUu | |||||| || ||||| || uaCACUAUCA-AAACAGCAUCUAu 2 22 694 716 [mm9:1:89842455-89842477:-] 0.5024 131 0 -12.42 -0.6569 MIMAT0000208 mmu-miR-10b 227334 Usp40 guGUUUAAGCCAAGAUGUCCCau ||:| | | |||||| aaCAGAAUAGACAAAACAGGGaa 3 22 1397 1419 [mm9:1:89841752-89841774:-] 0.5216 125 0 -12.83 -0.1115 MIMAT0000213 mmu-miR-184 227334 Usp40 ugGGAAUAGUCAAGAGG-CAGGu | || |||||:||| |||| ucCAUUCCCAGUUUUCCAGUCCu 2 21 418 440 [mm9:1:89842731-89842753:-] 0.5024 136 0 -23.72 -0.3856 MIMAT0000219 mmu-miR-24 227334 Usp40 gacAAGGAC--GACUUGACUCGGu | |:|| | ||||||||| cauUACUUGACCACAACUGAGCCc 2 20 1131 1154 [mm9:1:89842017-89842040:-] 0.5178 154 7 -19.31 -0.4945 MIMAT0000219 mmu-miR-24 227334 Usp40 gacaaggACGACUUGAC-UCGGu |||| |:||| |||| ccucaagUGCU-AGCUGCAGCCu 2 16 1311 1332 [mm9:1:89841839-89841860:-] 0.5277 121 0 -16.54 -0.1676 MIMAT0000220 mmu-miR-190 227334 Usp40 uggAUUAUA-UAGUU-UGU-AUAGu || |:| ||:|| ||| |||| augUACUGUAAUUAAUACACUAUCa 2 20 679 703 [mm9:1:89842468-89842492:-] 0.5024 125 0 -9.66 -1.1497 MIMAT0000224 mmu-miR-194 227334 Usp40 agguguACCUCAAC--GA-CAAUGu |||| ||| || ||||| agauguUGGACUUGGACUAGUUACc 2 17 1046 1070 [mm9:1:89842101-89842125:-] 0.5048 123 0 -10.02 -0.2856 MIMAT0000233 mmu-miR-200b 227334 Usp40 aguaGUAAUGGUCCGUCAUAAu :|| | ||| ||||||| agccUAUGA-CAGACAGUAUUc 2 19 753 773 [mm9:1:89842398-89842418:-] 0.5024 156 7 -12.28 -0.1990 MIMAT0000233 mmu-miR-200b 227334 Usp40 aguaguaaugGUCCGUCAUAAu || |||||||| ----ccccugCA-GCAGUAUUu 2 13 1 17 [mm9:1:89843154-89843170:-] 0.5419 146 7 -11.78 -0.4360 MIMAT0000368 mmu-miR-291a-3p 227334 Usp40 cguguguuucACCUUCGUGAAa | ||||||||| acugauucuaUUGAAGCACUUg 2 13 1017 1038 [mm9:1:89842133-89842154:-] 0.5044 152 7 -12.74 -0.6103 MIMAT0000372 mmu-miR-294 227334 Usp40 uguguguuuuccCUUCGUGAAa ||||||||| acugauucuauuGAAGCACUUg 2 11 1017 1038 [mm9:1:89842133-89842154:-] 0.5044 150 7 -11.88 -0.6103 MIMAT0000373 mmu-miR-295 227334 Usp40 ucUGAGUUUUCAUCAUCGUGAAa |:|| | | | ||||||| ugAUUCUA---UUGAAGCACUUg 2 22 1019 1038 [mm9:1:89842133-89842152:-] 0.5044 145 7 -12.29 -0.6103 MIMAT0004577 mmu-miR-299 227334 Usp40 uucgccAAAUGGCAGGG-UGUAu |||::| |||| |||| ucuuccUUUGUCUUCCCAACAUc 2 17 965 987 [mm9:1:89842184-89842206:-] 0.5024 128 0 -13.12 -0.4386 MIMAT0000380 mmu-miR-302a 227334 Usp40 agUGGUUUUG-UACCUUCGUGAAu ||::| | || ||||||||| ugACUGAUUCUAUUGAAGCACUUg 2 22 1015 1038 [mm9:1:89842133-89842156:-] 0.5044 164 7 -17.55 -0.6140 MIMAT0000385 mmu-miR-106a 227334 Usp40 gauggACGUGA-C-AAUC-GUGAAAc ||:||| | | || |||||| ccugaUGUACUAGCUCAGACACUUUg 2 19 1226 1251 [mm9:1:89841920-89841945:-] 0.5277 124 6 -19.21 -0.1863 MIMAT0000386 mmu-miR-106b 227334 Usp40 uagACGUGA-C-AGUC-GUGAAAu ||:||| | |||| |||||| ugaUGUACUAGCUCAGACACUUUg 2 19 1228 1251 [mm9:1:89841920-89841943:-] 0.5277 132 6 -20.12 -0.1863 MIMAT0000526 mmu-miR-15a 227334 Usp40 guGUUUGGUAAUACACGA-CGAu || :|| | | ||||| ||| gaCAUGCC-UCAAGUGCUAGCUg 2 21 1305 1326 [mm9:1:89841845-89841866:-] 0.5277 122 0 -16.80 -0.2352 MIMAT0000528 mmu-miR-18a 227334 Usp40 gaUAGA-CGUGAUCUACGUGGAAu |||| |: ||: ||||||| ucAUCUAGUUCUG---GCACCUUa 2 22 365 385 [mm9:1:89842786-89842806:-] 0.5024 148 7 -18.44 -0.2976 MIMAT0000529 mmu-miR-20a 227334 Usp40 gauggACGUGAU--AUUC-GUGAAAu ||:|||| | || |||||| ccugaUGUACUAGCUCAGACACUUUg 2 19 1226 1251 [mm9:1:89841920-89841945:-] 0.5277 129 6 -19.38 -0.1880 MIMAT0000533 mmu-miR-26a 227334 Usp40 ucggauaggaccUAAUGAACUu ||||||||| caaacaguaaacAUUACUUGAc 2 11 1120 1141 [mm9:1:89842030-89842051:-] 0.5079 150 7 -8.23 -0.2273 MIMAT0000534 mmu-miR-26b 227334 Usp40 uggauaggacuUAAUGAACUu ||||||||| aaacaguaaacAUUACUUGAc 2 11 1121 1141 [mm9:1:89842030-89842050:-] 0.5079 150 7 -8.43 -0.2273 MIMAT0000540 mmu-miR-93 227334 Usp40 gauggACGUGCUU--GUC-GUGAAAc ||:|| |: ||| |||||| ccugaUGUACUAGCUCAGACACUUUg 2 19 1226 1251 [mm9:1:89841920-89841945:-] 0.5277 125 6 -20.69 -0.1880 MIMAT0000546 mmu-miR-103 227334 Usp40 aguaUCGGGAC-AUG-UUACGACGa || | || | | |||||||| cagcAGACAUGCUUCAAAUGCUGCc 2 20 7 31 [mm9:1:89882408-89882432:-] 0.4769 153 7 -16.49 -0.1098 MIMAT0000548 mmu-miR-322 227334 Usp40 aggUUUUGUAC----UUAACGA-CGAc ||:||||| || |||| ||| cagAAGACAUGCCUCAAGUGCUAGCUg 2 20 1300 1326 [mm9:1:89841845-89841871:-] 0.5277 126 0 -18.52 -0.2352 MIMAT0000582 mmu-miR-338-3p 227334 Usp40 guuguuuuagUGACUACGACCu :|| ||||||| uucuggugcaGCU-AUGCUGGc 2 13 908 928 [mm9:1:89842243-89842263:-] 0.5024 142 7 -13.48 -0.1313 MIMAT0000584 mmu-miR-339-5p 227334 Usp40 gcacucgaggaccuccUGUCCCu |||||| gaacagaauagacaaaACAGGGa 2 8 1396 1418 [mm9:1:89841753-89841775:-] 0.5216 120 6 -13.77 -0.1057 MIMAT0004651 mmu-miR-340-5p 227334 Usp40 uuagucagaguaacGAAAUAuu |||||| gaaaaacacuaagaCUUUAUua 3 9 1417 1438 [mm9:1:89841733-89841754:-] 0.5216 120 0 -4.65 -0.1253 MIMAT0000616 mmu-miR-101b 227334 Usp40 aaguCGAUAGUGUCAUGACAu | |||: ||||||| auuuGGUAUUUAUGUACUGUa 2 18 668 688 [mm9:1:89842483-89842503:-] 0.5024 149 7 -14.39 -1.1201 MIMAT0000616 mmu-miR-101b 227334 Usp40 aagucGAUAGUG-UCAUGACAu ||:|: | ||||||| ggauaCUGUUUCUUGUACUGUa 2 17 1165 1186 [mm9:1:89841985-89842006:-] 0.5277 147 7 -15.88 -0.7762 MIMAT0000647 mmu-miR-107 227334 Usp40 acuaUCGGGAC-AUG-UUACGACGa || | || | | |||||||| cagcAGACAUGCUUCAAAUGCUGCc 2 20 7 31 [mm9:1:89882408-89882432:-] 0.4769 153 7 -14.72 -0.1098 MIMAT0000648 mmu-miR-10a 227334 Usp40 guGUUUAAGCCUAGAUGUCCCau ||:| | | |||||| aaCAGAAUAGACAAAACAGGGaa 3 22 1397 1419 [mm9:1:89841752-89841774:-] 0.5216 125 0 -12.83 -0.1115 MIMAT0000649 mmu-miR-17 227334 Usp40 gauggACGUGA-C-AUUC-GUGAAAc ||:||| | | || |||||| ccugaUGUACUAGCUCAGACACUUUg 2 19 1226 1251 [mm9:1:89841920-89841945:-] 0.5277 124 6 -19.20 -0.1863 MIMAT0000657 mmu-miR-200c 227334 Usp40 agguaguaauGGGC--CGUCAUAAu ||:| |||||||| --------ccCCUGCAGCAGUAUUu 2 14 1 17 [mm9:1:89843154-89843170:-] 0.5419 148 7 -14.55 -0.4360 MIMAT0000657 mmu-miR-200c 227334 Usp40 agGUAGUA-AUGGGCCGUCAUAAu :| | | |: | | ||||||| cuUAGCCUAUGACAGACAGUAUUc 2 22 750 773 [mm9:1:89842398-89842421:-] 0.5024 148 7 -10.66 -0.1990 MIMAT0000659 mmu-miR-212 227334 Usp40 acCGGCACUGACCUCUGA-CAAu |::| |||| | |||| ||| auGUUG-GACUUG-GACUAGUUa 2 21 1048 1068 [mm9:1:89842103-89842123:-] 0.5048 120 0 -17.18 -0.2274 MIMAT0000665 mmu-miR-223 227334 Usp40 acccCAUA-AAC-UG--UUUGACUGu || | ||| || ||||||| uacuGUUUCUUGUACUGUAACUGACa 2 19 1168 1193 [mm9:1:89841978-89842003:-] 0.5277 143 7 -13.36 -0.7212 MIMAT0000666 mmu-miR-320 227334 Usp40 agcgggAGAGUU---GGGUCGAAAa |||||| ::||||||| uagugaUCUCAAGUCUUCAGCUUUg 2 17 103 127 [mm9:1:89843044-89843068:-] 0.5270 155 7 -18.61 -0.3225 MIMAT0000666 mmu-miR-320 227334 Usp40 agcgGGAGAGUUGGGUCGAAAa ::|||:| |||||||| ucagUUUCUUA--CCAGCUUUu 2 19 795 814 [mm9:1:89842357-89842376:-] 0.5024 155 7 -18.62 -0.4333 MIMAT0000677 mmu-miR-7a 227334 Usp40 uguuguuuuAGUGAUCAGAAGGu |:|| ||||||| uaccagcuuUUACAUGUCUUCCu 2 15 804 826 [mm9:1:89842345-89842367:-] 0.5024 150 7 -16.86 -0.5800 MIMAT0000677 mmu-miR-7a 227334 Usp40 uguuguuuuAGUGAUCAGAAGGu || :| ||||||| ucuugcucuUCCUUUGUCUUCCc 2 15 959 981 [mm9:1:89842190-89842212:-] 0.5024 150 7 -11.87 -0.6020 MIMAT0000678 mmu-miR-7b 227334 Usp40 uguuguuuuAGUGUUCAGAAGGu |:||| ||||||| uaccagcuuUUACAUGUCUUCCu 2 15 804 826 [mm9:1:89842345-89842367:-] 0.5024 158 7 -19.41 -0.5800 MIMAT0000678 mmu-miR-7b 227334 Usp40 uguuguuuuAGUGUUCAGAAGGu || : ||||||| ucuugcucuUCCUUUGUCUUCCc 2 15 959 981 [mm9:1:89842190-89842212:-] 0.5024 142 7 -10.39 -0.6020 MIMAT0000704 mmu-miR-361 227334 Usp40 cauggggaCCU-CUAAGACUAUu ||| | ||||||| cucaaagaGGACAAAUCUGAUAg 2 15 294 316 [mm9:1:89842855-89842877:-] 0.5024 145 7 -14.27 -0.3355 MIMAT0000746 mmu-miR-381 227334 Usp40 ugucucucgaaCGGGAACAUAu || ||||||| auucuauugaaGCACUUGUAUu 2 12 1021 1042 [mm9:1:89842129-89842150:-] 0.5044 147 7 -9.91 -0.8038 MIMAT0001537 mmu-miR-429 227334 Usp40 ugcCGUA-AUGGUCUGUCAUAAu || | |: ||||||||||| uuaGCCUAUGACAGACAGUAUUc 2 20 751 773 [mm9:1:89842398-89842420:-] 0.5024 166 7 -17.22 -0.1990 MIMAT0001537 mmu-miR-429 227334 Usp40 ugccguaaugGUCUGUCAUAAu ||| ||||||| ----ccccugCAG-CAGUAUUu 2 13 1 17 [mm9:1:89843154-89843170:-] 0.5419 146 7 -11.78 -0.4114 MIMAT0003187 mmu-miR-20b 227334 Usp40 gauggACGUGAU--ACUC-GUGAAAc ||:|||| | || |||||| ccugaUGUACUAGCUCAGACACUUUg 2 19 1226 1251 [mm9:1:89841920-89841945:-] 0.5277 129 6 -21.49 -0.1880 MIMAT0003374 mmu-miR-302b 227334 Usp40 gaUGAUUUUG-UACCUUCGUGAAu |||:| | || ||||||||| ugACUGAUUCUAUUGAAGCACUUg 2 22 1015 1038 [mm9:1:89842133-89842156:-] 0.5044 168 7 -20.11 -0.6140 MIMAT0003377 mmu-miR-302d 227334 Usp40 ugUGAGUUUG-UACCUUCGUGAAu ||| | | || ||||||||| ugACUGAUUCUAUUGAAGCACUUg 2 22 1015 1038 [mm9:1:89842133-89842156:-] 0.5044 164 7 -18.19 -0.6140 MIMAT0003727 mmu-miR-374 227334 Usp40 gugaaUCGUCCAACAUAAUAUa |||| |||||||||| auugaAGCA-CUUGUAUUAUAa 2 18 1026 1046 [mm9:1:89842125-89842145:-] 0.5063 163 7 -12.40 -0.4589 MIMAT0003729 mmu-miR-216b 227334 Usp40 agUGUAAACGGACGUCUCUAAa ::| || :|| ||||||| agGUAACUGAUUGAAGAGAUUu 2 21 650 671 [mm9:1:89842500-89842521:-] 0.5024 156 7 -13.16 -0.4276 MIMAT0003453 mmu-miR-497 227334 Usp40 auGUUUGGUGUCACACGA-CGAc || :|| || ||||| ||| gaCAUGCCUCA-AGUGCUAGCUg 2 21 1305 1326 [mm9:1:89841845-89841866:-] 0.5277 122 0 -20.98 -0.2310 MIMAT0003513 mmu-miR-505 227334 Usp40 ucuuuugGUCG--UUC--ACAACUGc |||| ||| ||||||| cuagcugCAGCCUAAGUCUGUUGACa 2 16 1320 1345 [mm9:1:89841826-89841851:-] 0.5277 149 7 -14.39 -0.1514 MIMAT0004858 mmu-miR-18b 227334 Usp40 gauuGUC-GU-GAUCUA---CGUGGAAu :|| || |||| | ||||||| caguUAGUCAUCUAGUUCUGGCACCUUa 2 20 358 385 [mm9:1:89842786-89842813:-] 0.5024 148 7 -19.70 -0.3177 MIMAT0004869 mmu-miR-421 227334 Usp40 cgCGG-GUU-AAUUACAGACAACUa ||: ||: ||| ||||||||| uaGCUGCAGCCUAA-GUCUGUUGAc 2 22 1321 1344 [mm9:1:89841827-89841850:-] 0.5277 157 7 -20.87 -0.1090

DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G070394 Usp40 Mus musculus 227334

DNA & RNA Element - RepTar Gene Name miRNA Begin End Profile Usp40 mmu-miR-223 beg:1174 end:1194 pic:3' ACCCCATAAAC-TGT--TTGACTGT 5'& ||| || |||||||| &5' --------TTGTACTGTAACTGACA 3' Usp40 mmu-miR-188-5p beg:131 end:145 pic:3' GGGAGGTGGTACG-TTCCCTAC 5'& || |||||||| &5' -----------GCGAAGGGATG 3' Usp40 mmu-miR-704 beg:805 end:823 pic:3' GATCCTCGTCTCGTGTACAGA 5'& ||| .|||||||| &5' -----AGCTTT-TACATGTCT 3' Usp40 mmu-miR-2135 beg:225 end:245 pic:3' CAAAGCCGGGGT---TCTGGAGA 5'& |||| . |||||||| &5' ------GCCCGGAATAGACCTCT 3' Usp40 mmu-miR-216b beg:653 end:672 pic:3' AGTGTAAACGGACG----TCTCTAAA 5'& ||| |||||||| &5' ----------CTGATTGAAGAGATTT 3' Usp40 mmu-miR-877star beg:295 end:307 pic:3' ACCCTCCTCCCTCTTCTCCTGT 5'& ||||||||| &5' -------------AAGAGGACA 3' Usp40 mmu-miR-294 beg:1026 end:1038 pic:3' TGTGTGTTTTCCCTTCGTGAAA 5'& ||||||||| &5' ------------GAAGCACTT- 3' Usp40 mmu-miR-144 beg:1165 end:1187 pic:3' TCATG-TAGTAGATATGACAT 5'& ||| .|. .|.||||||| &5' --TACTGTTTCTTGTACTGTA 3' Usp40 mmu-miR-338-3p beg:915 end:928 pic:3' GTTGTTTTAGTGACTACGACCT 5'& .|| ||||||| &5' ----------GCT-ATGCTGG- 3' Usp40 mmu-miR-669o beg:1132 end:1150 pic:3' TGTATTTGTACGTGTGTGTTGAT 5'& || || || |||||||. &5' ------ACTTG-AC-CACAACTG 3' Usp40 mmu-miR-759 beg:544 end:556 pic:3' CAGTTTTAACAAACGTGAGACG 5'& ||||||||| &5' ------------TGCACTCTG- 3' Usp40 mmu-miR-200c beg:0 end:17 pic:3' AGGTAGTAATGGGC--CGTCATAAT 5'& ||.| |||||||| &5' ----------CCTGCAGCAGTATT- 3' Usp40 mmu-miR-200b beg:2 end:17 pic:3' AGTAGTAATGGTCCGTCATAAT 5'& |.| |||||||| &5' -------TGCA--GCAGTATT- 3' Usp40 mmu-miR-429 beg:4 end:17 pic:3' TGCCGTAATGGTCTGTCATAAT 5'& ||| ||||||| &5' ----------CAG-CAGTATT- 3' Usp40 mghv-miR-M1-1 beg:893 end:913 pic:3' TTTCCTTCATGCCG------GTAAAGAT 5'& ||| |||||||. &5' -----------GGCTTTTCACATTTCTG 3' Usp40 mmu-miR-214 beg:880 end:897 pic:3' TGA-CGGACAGACACGGACGACA 5'& .|| ||| ||||||| &5' GCTAGCC--------CCTGCTG- 3' Usp40 mmu-miR-1898 beg:1133 end:1143 pic:3' CTAGGGGACACTTGGAACTGGA 5'& ||||||| &5' --------------CTTGACC- 3' Usp40 mmu-miR-214star beg:1331 end:1349 pic:3' CGTGTCGTTCACATCTGTCCGT 5'& ||. ||| ||||||| &5' ----AGTC--TGTTGACAGGC- 3' Usp40 mmu-miR-1199 beg:202 end:222 pic:3' GGCGCGCTGGCCCTGAGTCT 5'& || ||.|. |||||||| &5' --GC-CGGCTCAGACTCAGA 3' Usp40 mmu-miR-340-3p beg:551 end:568 pic:3' CGATATTTCATTGA-CTCTGCCT 5'& |..| |||||||. &5' ---------TGGCCAGAGACGGG 3' Usp40 mmu-miR-18b beg:366 end:386 pic:3' GATTGTCGTGATCTA---CGTGGAAT 5'& |||| |||||||| &5' ---------CTAGTTCTGGCACCTTA 3' Usp40 mmu-miR-292-3p beg:132 end:151 pic:3' TGTGAGTTTTGGACC-GCCGTGAAA 5'& |.|| || .||||||| &5' -----CGAAG---GGATGGCACTT- 3' Usp40 mmu-miR-200cstar beg:837 end:853 pic:3' GGTTTGTGACGACC-CATTCTGC 5'& || ||| ||||||| &5' --------TG-TGGTGTAAGAC- 3' Usp40 mmu-miR-101b beg:1167 end:1187 pic:3' AAGTCGATAGTGT-CATGACAT 5'& ||.|. |||||||| &5' -----CTGTTTCTTGTACTGTA 3' Usp40 mmu-miR-101a beg:1169 end:1187 pic:3' AAGTCAATAGTGTCATGACAT 5'& ||| || |||||||| &5' ----GTT-TCTT-GTACTGTA 3' Usp40 mmu-miR-7a beg:965 end:981 pic:3' TGTTGTTTTAGTGAT-CAGAAGGT 5'& || || ||||||| &5' ---------TC-CTTTGTCTTCC- 3' Usp40 mmu-miR-7b beg:965 end:981 pic:3' TGTTGTTTTAGTGTTCAGAAGGT 5'& || . ||||||| &5' ---------TCCTTTGTCTTCC- 3' Usp40 mcmv-miR-m107-1-5p beg:341 end:359 pic:3' CCACTGAGCTCTGCTCACTGGC 5'& |||| || .|||||| &5' ----ACTCCTGA--GGTGACC- 3' Usp40 mmu-let-7a beg:1297 end:1316 pic:3' TTGATATGTTGGATG-ATGGAGT 5'& ||. || |.||||| &5' -------CAGAAGACATGCCTCA 3' Usp40 mmu-let-7b beg:1295 end:1316 pic:3' TTGGTGTGTTGGATGATGGAGT 5'& |.||| | .|| |.||||| &5' AGCCAGAAGACA---TGCCTCA 3' Usp40 mmu-let-7c beg:1295 end:1316 pic:3' TTGGTATGTTGGATGATGGAGT 5'& |.||| .|| |.||||| &5' AGCCAGAAGACA---TGCCTCA 3' Usp40 mmu-let-7i beg:1294 end:1316 pic:3' TTGTCGTGTTTGATG-ATGGAGT 5'& ||| ||.| || |.||||| &5' ---AGC-CAGAAGACATGCCTCA 3' Usp40 mmu-miR-101astar beg:639 end:660 pic:3' CGTAGTCGTGACACTATTGACT 5'& .||||||| |.||||||| &5' --GTCAGCACA--GGTAACTGA 3' Usp40 mmu-miR-101b beg:666 end:689 pic:3' AAGTCGATAGTGTCATGACAT 5'& || |. |.|. |||||||| &5' TTTGGTATTTAT-GTACTGTA 3' Usp40 mmu-miR-105 beg:1022 end:1039 pic:3' TGGTGTTCGTAGACTCGTGAACC 5'& .||. |||||||| &5' --------TATTGAAGCACTTG- 3' Usp40 mmu-miR-10a beg:777 end:795 pic:3' GTGTTTAAGCCTAGAT-GTCCCAT 5'& ||| .|. ||||||| &5' ---------GGAATTGTCAGGGTA 3' Usp40 mmu-miR-10b beg:777 end:795 pic:3' GTGTTTAAGCCAAGAT-GTCCCAT 5'& || .|. ||||||| &5' ---------GGAATTGTCAGGGTA 3' Usp40 mmu-miR-1188 beg:1083 end:1103 pic:3' AGGACCGGGTTGGAGTGTGGT 5'& |||| |. .|. ||||||| &5' TCCTTGTA--GCTACACACCA 3' Usp40 mmu-miR-1190 beg:934 end:956 pic:3' CTGTCTCCCCTTGGAGTCGACT 5'& . ||| || ||||||||. &5' -GTGGAGCTGATGCTCAGCTGG 3' Usp40 mmu-miR-1193 beg:247 end:257 pic:3' CTATCATTTTGCCCACTGGAT 5'& |||.||| &5' -------------GTGGCCT- 3' Usp40 mmu-miR-1193 beg:731 end:754 pic:3' CTATCATTTTGCCC-ACTGGAT 5'& ||| .||| ||||.|| &5' --TAGGACCCTGGGCTGACTTA 3' Usp40 mmu-miR-1197 beg:395 end:416 pic:3' TCTTCATCTGGTACACAGGAT 5'& .|||| ..||||||||. &5' GGAAGGA---TGTGTGTCCTG 3' Usp40 mmu-miR-1224 beg:626 end:650 pic:3' GAGGTGGAGGGGTCAGGAGTG 5'& |||| |||.|.||||| ||| &5' CTCCTCCTTCTCAGTCAGCAC 3' Usp40 mmu-miR-1224 beg:422 end:444 pic:3' GAGGTGGAGGGGTCAGGAGTG 5'& ||| .| ||||||||||| &5' --CCAGTTTTCCAGTCCTCAC 3' Usp40 mmu-miR-1274a beg:1049 end:1072 pic:3' ACCGCGGACTTG-TCCCTGGACT 5'& ||| |.||.|| || |||| &5' TGGA-CTTGGACTAGTTACCT-- 3' Usp40 mmu-miR-127star beg:864 end:883 pic:3' TAGTCTCGGGAGACTCGAAGTC 5'& || .||| ||.||||||| &5' -TCT-GGCC---TGGGCTTCAG 3' Usp40 mmu-miR-128 beg:513 end:533 pic:3' TTTCTCTGGCCAA--GTGACACT 5'& |.| .|||||| &5' -----GGCATTCACCTACTGTG- 3' Usp40 mmu-miR-129-5p beg:202 end:222 pic:3' CGTTCGGGTCTGGCGTTTTTC 5'& || .||.|||||. ||.| &5' GCCGGCTCAGACT-CAGA--- 3' Usp40 mmu-miR-133astar beg:795 end:811 pic:3' TAAACCAAGGTAAAATGGTCG 5'& |||.| |||||||| &5' -----GTTTC---TTACCAGC 3' Usp40 mmu-miR-135a beg:497 end:512 pic:3' AGTGTATCCTTATTTTTCGGTAT 5'& |||| |||||.||. &5' ------AGGA----AAAGCTATG 3' Usp40 mmu-miR-135b beg:493 end:512 pic:3' AGTGTATCCTTACTTTTCGGTAT 5'& | || |||||||.||. &5' TTGCAG------GAAAAGCTATG 3' Usp40 mmu-miR-138 beg:795 end:812 pic:3' GCCGGACTAAGTGTTGTGGTCGA 5'& | ||| .||||||| &5' ------GTTTCT---TACCAGCT 3' Usp40 mmu-miR-139-5p beg:917 end:940 pic:3' GACCTCTGTGCA--CGT---GACATCT 5'& .|.| || ||||.|| &5' -------TATGCTGGCTTCTCTGTGGA 3' Usp40 mmu-miR-1 beg:889 end:911 pic:3' TATGTATGAAGAAATGTAAGGT 5'& |.| .|||.| |||||.| &5' -TGCTGGCTTTTC-ACATTTC- 3' Usp40 mmu-miR-144 beg:669 end:689 pic:3' TCATGTAGTAGATATGACAT 5'& .|||. |.||||||| &5' GGTATTTA---TGTACTGTA 3' Usp40 mmu-miR-144 beg:356 end:378 pic:3' TCATGTAGTAGATAT-GACAT 5'& ||| .||||||| ||| &5' AGTTAGTCATCTAGTTCTG-- 3' Usp40 mmu-miR-145star beg:1240 end:1262 pic:3' GTTCT-TGTCATAAAGGTCCTTA 5'& ||| || |. ||.|||||| &5' --AGACACTTTGCTTTCAGGAA- 3' Usp40 mmu-miR-145star beg:1397 end:1419 pic:3' GTTCTTGTCATAAAGGTCCTTA 5'& ||||.|| ||||.| &5' --AGAATAGACAAAACAGGGA- 3' Usp40 mmu-miR-145star beg:484 end:505 pic:3' GTTCTTGTCATAAAGGTCCTTA 5'& .||| ||| || |||||| &5' TAAGC-CAGC--TTGCAGGAA- 3' Usp40 mmu-miR-150 beg:1098 end:1118 pic:3' GTGACCATGTTC-CCA--ACCCTCT 5'& |||| ||| ||||||| &5' --------CAAGAGGTTCTGGGAGA 3' Usp40 mmu-miR-154 beg:740 end:759 pic:3' GCTTCCG-TTGTGCCTATTGGAT 5'& .||| .|| ||.|||| &5' ---GGGCTGACT----TAGCCTA 3' Usp40 mmu-miR-15astar beg:242 end:257 pic:3' ACTCCGTCGTGTCATACCGGAC 5'& .|| |.|||||| &5' --------TACC-TGTGGCCT- 3' Usp40 mmu-miR-16star beg:1147 end:1167 pic:3' AGTCGTCGTGTCAGTTATGACC 5'& ||| | | .||||||| &5' -----AGCCCTCTGGATACTGG 3' Usp40 mmu-miR-17star beg:1309 end:1330 pic:3' GATGTTCACGGGAGTGACGTCA 5'& || |||||||. .|||||| &5' CT-CAAGTGCTA--GCTGCAG- 3' Usp40 mmu-miR-182 beg:982 end:998 pic:3' GCCACACTCAAGATGGT-AACGGTTT 5'& |.|| ||||||.| &5' -------------ATCATTTGCCAGA 3' Usp40 mmu-miR-186star beg:600 end:619 pic:3' GGGTTTTTTAAGTGGAATCCCG 5'& |||| || .|||.||| &5' CCCA-----TTTGTCTTGGGG- 3' Usp40 mmu-miR-1897-5p beg:244 end:266 pic:3' GGGGGAGAAA-GAGGTAGGTTTC 5'& ||| | |||. ||||.| &5' ---CCTGTGGCCTCTTTCCAGA- 3' Usp40 mmu-miR-18a beg:364 end:386 pic:3' GATAGA-CGTGATCTACGTGGAAT 5'& |||| |. ||. |||||||| &5' --ATCTAGTTCTG---GCACCTTA 3' Usp40 mmu-miR-190b beg:803 end:822 pic:3' TTGGGTTATAGTTTGTATAGT 5'& |||. |. ||||.|| &5' ---CCAGCTTTT-ACATGTC- 3' Usp40 mmu-miR-191star beg:905 end:920 pic:3' CCCTTGCTTTAGGTTCACGTCG 5'& |.| .||||||| &5' ----------TTCTGGTGCAGC 3' Usp40 mmu-miR-1936 beg:320 end:337 pic:3' CGGTCAAGTGTCGTCCAGTCAAT 5'& |||| || ||||||| &5' -------CACA--AGATCAGTTA 3' Usp40 mmu-miR-193star beg:721 end:742 pic:3' AGTAGAACGGGCGT-TTCTGGGT 5'& || || |. |.||||| &5' ----CTAGCAGGTTTAGGACCC- 3' Usp40 mmu-miR-1940 beg:410 end:436 pic:3' TTGAC-GAGGTGGAAGAGTCAGGAGGTA 5'& ||| |||||. || ||||..|||| &5' --CTGACTCCAT--TCCCAGTTTTCCA- 3' Usp40 mmu-miR-1944 beg:632 end:653 pic:3' TTAGTCTTGAACTGTAAGTCGTGTCTC 5'& ||| || |||||||||. &5' --------CTTCTCAGTCAGCACAGG- 3' Usp40 mmu-miR-1949 beg:833 end:849 pic:3' TTGATACGACTGTAGGACCATATC 5'& ||||.. ||||.|| &5' -------CTGATG---TGGTGTA- 3' Usp40 mmu-miR-1953 beg:731 end:759 pic:3' GTCTTCGGACTC--TTGAAA-GGGT 5'& .||.| ||||.| .|||| ||.| &5' TAGGACCCTGGGCTGACTTAGCCTA 3' Usp40 mmu-miR-195 beg:7 end:28 pic:3' CGGTTATAAA-GACACGACGAT 5'& ||.||||| ||||||| | &5' --CAGTATTTCCTGTGCTTC-- 3' Usp40 mmu-miR-1956 beg:859 end:880 pic:3' AGGCGACTGAGTCGGGACCTGA 5'& |.| |||| | |||||.|| &5' ---GTT-ACTCTGGCCTGGGCT 3' Usp40 mmu-miR-1957 beg:706 end:722 pic:3' CAGTATACG-AGATGGTGAC 5'& || ||||..|||| &5' -------GCATCTATTACTG 3' Usp40 mmu-miR-1961 beg:1057 end:1073 pic:3' AAGATTGAT-GATGGAGT 5'& .|||| .|||||. &5' ----GACTAGTTACCTT- 3' Usp40 mmu-miR-1962 beg:795 end:815 pic:3' TACACAGGGTCACGGTCGGAGA 5'& || | |||||.|.| &5' ----GTTTCTTA-CCAGCTTTT 3' Usp40 mmu-miR-1968 beg:1307 end:1329 pic:3' TCAGGTGGTAGGAATTG-TCGACGT 5'& .|| || .| ||||||| &5' -----GCC-TCAAGTGCTAGCTGCA 3' Usp40 mmu-miR-1968 beg:376 end:397 pic:3' TCAGGTGGTAGGAATTGTCGACGT 5'& |||| || ||||||| &5' ----CACCTTACTGA--AGCTGCA 3' Usp40 mmu-miR-1968 beg:180 end:203 pic:3' TCAGGTGGTAGGAATTGTCGACGT 5'& || . | | |.|||||||| &5' --TCTGTGACAC--AGCAGCTGCA 3' Usp40 mmu-miR-1970 beg:175 end:194 pic:3' GTTTCGGATAGGGGTCACTGTGT 5'& ||| |.|. |||||||| &5' ------CTAGCTCT-GTGACACA 3' Usp40 mmu-miR-1970 beg:1197 end:1224 pic:3' GTTTCGGATAGGGGTCAC-TGTGT 5'& | ||..|.||||||| |.||| &5' CTTAGTTTGTCCCCAGGCAATACA 3' Usp40 mmu-miR-1971 beg:796 end:817 pic:3' AGAGTCGGGTCGGAAATG 5'& |.|| |||||.||||| &5' TTTCTTACCAGCTTTTAC 3' Usp40 mmu-miR-1971 beg:481 end:500 pic:3' AGAG--TCGGGTCGGAAATG 5'& ||| || |||||. |.| &5' -CTCTAAG-CCAGCT--TGC 3' Usp40 mmu-miR-1971 beg:956 end:975 pic:3' AGAGTCGGGTCGGAAATG 5'& |||. ||.| |||||. &5' TCTT-GCTCTTCCTTTG- 3' Usp40 mmu-miR-1981 beg:795 end:817 pic:3' CGGTGCAGATTCGGGTCGGAAATG 5'& ||.| |||||.||||| &5' -----GTTTCTTACCAGCTTTTAC 3' Usp40 mmu-miR-1982star beg:963 end:984 pic:3' GGAGGGGTCCTGGGAGGGTT 5'& ||.||. | .|.|||||| &5' -CTTCCTTTG-TCTTCCCAA 3' Usp40 mmu-miR-1983 beg:342 end:357 pic:3' TCTTTTGTACGAGG--TCCACTC 5'& |||| |||||| &5' ----------CTCCTGAGGTGA- 3' Usp40 mmu-miR-199a-5p beg:1146 end:1167 pic:3' CTTGTCCATCAGACTTGTGACCC 5'& ||.| ||||.|.||||| &5' GAGCCC----TCTGGATACTGG- 3' Usp40 mmu-miR-199bstar beg:1146 end:1167 pic:3' CTTGTCCATCAGATTTGTGACCC 5'& ||.| |||..|.||||| &5' GAGCCC----TCTGGATACTGG- 3' Usp40 mmu-miR-202-3p beg:436 end:459 pic:3' AGAAGGGTACGCGATATGGAGA 5'& || |.|||| |.|.|||| &5' -CTCACTATGCCATGTGCCTC- 3' Usp40 mmu-miR-20bstar beg:1312 end:1330 pic:3' GATCTTCACGAGTGTGACGTCA 5'& ||||||| .|||||| &5' ----AAGTGCTA--GCTGCAG- 3' Usp40 mmu-miR-2135 beg:1413 end:1435 pic:3' CAAAGCCG----G-GGTTCTGGAGA 5'& || | |.|||||.|. &5' -----GGAAAAACACTAAGACTTT- 3' Usp40 mmu-miR-2141 beg:1067 end:1088 pic:3' TTGAAAAGACT-GTGGAGGA 5'& ||||||||. ||. |||| &5' --CTTTTCTGGCCATGTCCT 3' Usp40 mmu-miR-218-1star beg:996 end:1012 pic:3' CCACGAACTGCCTTGGTACAAA 5'& ||||.| .|||||| &5' -----TTGATG---TCATGTT- 3' Usp40 mmu-miR-218-2star beg:552 end:573 pic:3' GCGCCACGAACTGTCTTGGTAC 5'& || |||.|.||||| &5' ---GGCCAGAGACGGGACCAT- 3' Usp40 mmu-miR-2183 beg:776 end:799 pic:3' TCCTC--CAGTCCCCAAGTT 5'& |||| ||||||| |||. &5' AGGAATTGTCAGGGTATCAG 3' Usp40 mmu-miR-220 beg:833 end:847 pic:3' TTCACAGACTGTGACACCACC 5'& |||| ||||||| &5' ------CTGA---TGTGGTG- 3' Usp40 mmu-miR-222 beg:828 end:846 pic:3' TGGGTCATCGGTCTACATCGA 5'& ||| | |||||.|. &5' ---CAGAA--CTGATGTGGT- 3' Usp40 mmu-miR-24 beg:1133 end:1154 pic:3' GACAAGGACGAC--TTGACTCGGT 5'& |.|| ||||||||| &5' -----CTTGACCACAACTGAGCC- 3' Usp40 mmu-miR-24 beg:448 end:470 pic:3' GACAAGGACGACTTGACTCGGT 5'& ||| ||| || .||||||| &5' -TGTGCCTCCTC--TTGAGCCA 3' Usp40 mmu-miR-26bstar beg:1380 end:1402 pic:3' CTCGGTTCATT-ACCTCTTGTCC 5'& |. ||. |||||||||| &5' --GTGT-GTGTTTGGAGAACAG- 3' Usp40 mmu-miR-27a beg:170 end:190 pic:3' CGCCT-TGAATCGGTGACACTT 5'& || || ||||. |||||| &5' --GGTTAC-TAGCT-CTGTGA- 3' Usp40 mmu-miR-27astar beg:1135 end:1155 pic:3' ACGAGTGTTCGTCGATTCGGGA 5'& || ||||| ||.|||||| &5' TGACCACAA----CTGAGCCCT 3' Usp40 mmu-miR-28star beg:1341 end:1358 pic:3' AGGTCGTCGAGTGTTAGATCAC 5'& ||| || | ||||.|| &5' --CAG--GC-CT--ATCTGGT- 3' Usp40 mmu-miR-290-3p beg:130 end:151 pic:3' CCCGAATTTTGATCC-GCCGTGAAA 5'& ||| .|| .||||||| &5' -GGCGAA-----GGGATGGCACTT- 3' Usp40 mmu-miR-291a-3p beg:131 end:151 pic:3' CGTGTGTTTCACCT-TCGTGAAA 5'& .|.||| ||| .|||||| &5' ----GCGAAG-GGATGGCACTT- 3' Usp40 mmu-miR-295 beg:1017 end:1038 pic:3' TCTGAGTTTTCATCATCGTGAAA 5'& ||.|| | ||||||| &5' -GATTCTATT---GAAGCACTT- 3' Usp40 mmu-miR-295 beg:132 end:151 pic:3' TCTGAGTTTTCATCATCGTGAAA 5'& |.||.| |.|||||| &5' -----CGAAGGGA-TGGCACTT- 3' Usp40 mmu-miR-297astar beg:1365 end:1390 pic:3' ATACCCATACACACATACATAT 5'& |.|| ||.|||||||.|||.|. &5' TGTGTGTGTGTGTGTGTGTGTG 3' Usp40 mmu-miR-297b-3p beg:1365 end:1390 pic:3' ATACCCATACACACATACATAT 5'& |.|| ||.|||||||.|||.|. &5' TGTGTGTGTGTGTGTGTGTGTG 3' Usp40 mmu-miR-297cstar beg:1365 end:1390 pic:3' ATACCCATACACACATACATAT 5'& |.|| ||.|||||||.|||.|. &5' TGTGTGTGTGTGTGTGTGTGTG 3' Usp40 mmu-miR-299star beg:475 end:493 pic:3' TACATACACCCTGCCATTTGGT 5'& || |||| |||.||| &5' ------GTAGGACTCTAAGCCA 3' Usp40 mmu-miR-29bstar beg:1284 end:1303 pic:3' ATTTGGTGGTATACTTTGGTCG 5'& .||| |.|.|||| &5' -----TACCTGGAGGAGCCAG- 3' Usp40 mmu-miR-300 beg:1029 end:1042 pic:3' CTTCTCTCGAACGGGAACGTAT 5'& || ||||.|| &5' -----------GCACTTGTAT- 3' Usp40 mmu-miR-302a beg:1022 end:1039 pic:3' AGTGGTTTTGTACCTTCGTGAAT 5'& .|| |||||||||. &5' ---------TATTGAAGCACTTG 3' Usp40 mmu-miR-302a beg:132 end:151 pic:3' AGTGGTTTTGTACCT-TCGTGAAT 5'& |.|| ||| .|||||| &5' ----CGAAG---GGATGGCACTT- 3' Usp40 mmu-miR-302c beg:1015 end:1038 pic:3' GGTGACTTTG-TACCTTCGTGAA 5'& ||||| | || ||||||||| &5' --ACTGATTCTATTGAAGCACTT 3' Usp40 mmu-miR-302d beg:1018 end:1039 pic:3' TGTGAGTTTGTACCTTCGTGAAT 5'& |.|| .|| |||||||||. &5' --ATTC---TATTGAAGCACTTG 3' Usp40 mmu-miR-302d beg:132 end:151 pic:3' TGTGAGTTTGTACCT-TCGTGAAT 5'& |.|| ||| .|||||| &5' -----CGAAG--GGATGGCACTT- 3' Usp40 mmu-miR-30astar beg:643 end:666 pic:3' CGACGTTTGTAGGCTGACTTTC 5'& || || .| |.||.||||. &5' GCA-CAGGTAACTGATTGAAG- 3' Usp40 mmu-miR-31 beg:948 end:966 pic:3' GTCGATACGGTCG-TAGAACGGA 5'& || |. |||||||. &5' -------GCTGGTAATCTTGCT- 3' Usp40 mmu-miR-320 beg:795 end:815 pic:3' AGCGGGAGAGTTGGGTCGAAAA 5'& | ..|||.| ||||||||| &5' --G-TTTCTTA--CCAGCTTTT 3' Usp40 mmu-miR-320 beg:106 end:127 pic:3' AGCGGGAGAGTT---GGGTCGAAAA 5'& |||||| ..||||||| &5' ------TCTCAAGTCTTCAGCTTT- 3' Usp40 mmu-miR-330 beg:545 end:564 pic:3' CGGATTCTGTGT--CCGGGTCTCT 5'& .||| || ||||||| &5' -------GCACTCTGG-CCAGAGA 3' Usp40 mmu-miR-337-3p beg:923 end:945 pic:3' TCCGTAGTATATCCTCGACTT 5'& ||| || |||||||| &5' -GGCTTCTCTGTGGAGCTGA- 3' Usp40 mmu-miR-338-3p beg:1044 end:1056 pic:3' GTTGTTTTAGTGACTACGACCT 5'& ||||.|||| &5' -------------GATGTTGGA 3' Usp40 mmu-miR-340-5p beg:108 end:131 pic:3' TTAG-TCAGAGTAACGAAATATT 5'& || |||||. |||||.|.| &5' --TCAAGTCTTCA-GCTTTGTGA 3' Usp40 mmu-miR-3471 beg:95 end:114 pic:3' TTACGGAATGTCAA-C-CTAGAGT 5'& |||| | ||||||| &5' --------ACAGCTAGTGATCTCA 3' Usp40 mmu-miR-3473 beg:245 end:264 pic:3' CCGAC-TCGGTAGAGAGGT 5'& ||| .||| |||.|||| &5' --CTGTGGCC-TCTTTCCA 3' Usp40 mmu-miR-3475 beg:444 end:460 pic:3' AAGTTTGGTACACGGAGGTCT 5'& .|||||||||||| &5' -----GCCATGTGCCTCC--- 3' Usp40 mmu-miR-350 beg:119 end:131 pic:3' CTTTCACATACCCGAAACACTT 5'& ||||||||| &5' ------------GCTTTGTGA- 3' Usp40 mmu-miR-361 beg:299 end:316 pic:3' CATGGGGACCTCTA-AGACTATT 5'& ||| |||||||. &5' --------GGACAAATCTGATAG 3' Usp40 mmu-miR-378star beg:774 end:793 pic:3' TGTGTCCTGGACCTCAGTCCTC 5'& | |||| ||||||. &5' --AGAGGAATT---GTCAGGG- 3' Usp40 mmu-miR-379 beg:521 end:543 pic:3' GGATG-CAAGGTATCAGATGGT 5'& ||||| || || ||||||| &5' CCTACTGTGT--TA-TCTACCA 3' Usp40 mmu-miR-384-3p beg:1098 end:1117 pic:3' TAACACTTGTTA---AAGATCCTTA 5'& ||| ||||.|||. &5' --------CAAGAGGTTCTGGGAG- 3' Usp40 mmu-miR-421 beg:1323 end:1344 pic:3' CG-CGGGTTAATTACAGACAACTA 5'& || |||.|| ||||||||| &5' GCAGCCTAA-----GTCTGTTGA- 3' Usp40 mmu-miR-429 beg:751 end:771 pic:3' TGCCGTAATG-GTCTGTCATAAT 5'& || ||||||||||| &5' ---GCCTATGACAGACAGTATT- 3' Usp40 mmu-miR-432 beg:463 end:491 pic:3' GACGG-----GTGACTAGATGAGGTTCT 5'& ||| || | ||||.||| &5' --GCCAAATTCAAAGTAGGACTCTAAG- 3' Usp40 mmu-miR-449b beg:487 end:510 pic:3' CGGTCGATTGTTGTGA-CGGA 5'& ||||||| .||. | ||. &5' GCCAGCTTGCAGGAAAAGCT- 3' Usp40 mmu-miR-449c beg:803 end:827 pic:3' GGTCGATCGT-TACGTGACGGA 5'& |||||| .| |||. || ||| &5' CCAGCTTTTACATGT-CTTCCT 3' Usp40 mmu-miR-450a-3p beg:1197 end:1216 pic:3' TACTTACGTTTCG--TAGGGGTTA 5'& | ||. .||||||. &5' -------CTTAGTTTGTCCCCAG- 3' Usp40 mmu-miR-450a-3p beg:417 end:430 pic:3' TACTTACGTTTCGTAGGGGTTA 5'& |||.||||.| &5' ------------CATTCCCAGT 3' Usp40 mmu-miR-450a-3p beg:971 end:984 pic:3' TACTTACGTTTCGTAGGGGTTA 5'& |. |.||||| &5' -----------GTCTTCCCAA- 3' Usp40 mmu-miR-450b-3p beg:959 end:984 pic:3' TACGTACGTTTTACA--AGGGTTA 5'& ||| ||| |||||| &5' -TGCTCTTCCTTTGTCTTCCCAA- 3' Usp40 mmu-miR-450b-5p beg:190 end:203 pic:3' ATAAGTCCTTGTATGACGTTTT 5'& |.|| .|||||.| &5' --------AGCA-GCTGCAGA- 3' Usp40 mmu-miR-465a-3p beg:1221 end:1232 pic:3' AGATGAATCTTTCCGGGACTAG 5'& |.|||||| &5' -------------GTCCTGAT- 3' Usp40 mmu-miR-465b-3p beg:1221 end:1232 pic:3' AGATGAATCTTTCCGGGACTAG 5'& |.|||||| &5' -------------GTCCTGAT- 3' Usp40 mmu-miR-465c-3p beg:1221 end:1232 pic:3' AGATGAATCTTTCCGGGACTAG 5'& |.|||||| &5' -------------GTCCTGAT- 3' Usp40 mmu-miR-466a-3p beg:1368 end:1390 pic:3' AGAATACACACGCACATACATAT 5'& |.||||||.||||.|||.|. &5' ---TGTGTGTGTGTGTGTGTGTG 3' Usp40 mmu-miR-466b-3-3p beg:1362 end:1387 pic:3' AGAATACACACGCACATACATAA 5'& |.||.||||||.||||.|||.| &5' TTTTGTGTGTGTGTGTGTGTGT- 3' Usp40 mmu-miR-466b-3p beg:1368 end:1390 pic:3' AGAATACACACGCACATACATAT 5'& |.||||||.||||.|||.|. &5' ---TGTGTGTGTGTGTGTGTGTG 3' Usp40 mmu-miR-466c-3p beg:1368 end:1390 pic:3' AGAATACACACGCACATACATAT 5'& |.||||||.||||.|||.|. &5' ---TGTGTGTGTGTGTGTGTGTG 3' Usp40 mmu-miR-466d-3p beg:1365 end:1388 pic:3' GATACACACGCACATACATAT 5'& |.||||||.||||.|||.|. &5' -TGTGTGTGTGTGTGTGTGTG 3' Usp40 mmu-miR-466e-3p beg:1368 end:1390 pic:3' AGAATACACACGCACATACATAT 5'& |.||||||.||||.|||.|. &5' ---TGTGTGTGTGTGTGTGTGTG 3' Usp40 mmu-miR-466f-3p beg:1366 end:1390 pic:3' CACACATACACACACACATAC 5'& ||||||.|||||||||||.|| &5' GTGTGTGTGTGTGTGTGTGTG 3' Usp40 mmu-miR-466g beg:1365 end:1389 pic:3' ACACACACGTACACAGACATA 5'& ||||||||..||||| |||.| &5' TGTGTGTGTGTGTGTGTGTGT 3' Usp40 mmu-miR-466i beg:1366 end:1389 pic:3' ATCACACATACACACACACATA 5'& ||||||.|||||||||||.| &5' --GTGTGTGTGTGTGTGTGTGT 3' Usp40 mmu-miR-467a-1star beg:1366 end:1391 pic:3' CACATCCACACACATACATATA 5'& ||||. ||||||||.|||.|.| &5' GTGTGTGTGTGTGTGTGTGTGT 3' Usp40 mmu-miR-467bstar beg:1366 end:1391 pic:3' CACAACCACACACATACATATA 5'& |||| ||||||||.|||.|.| &5' GTGTGTGTGTGTGTGTGTGTGT 3' Usp40 mmu-miR-467bstar beg:1372 end:1390 pic:3' CACAACCACACACATACATATA 5'& ||||||||.|||.|.| &5' ------GTGTGTGTGTGTGTGT 3' Usp40 mmu-miR-467dstar beg:1366 end:1391 pic:3' CACATCCACACACATACATATA 5'& ||||. ||||||||.|||.|.| &5' GTGTGTGTGTGTGTGTGTGTGT 3' Usp40 mmu-miR-467e beg:506 end:527 pic:3' TGTATATGTACG--AGTGTGAATA 5'& .||.||.. || |||| || &5' -TATGTATG-GCATTCAC-CT--- 3' Usp40 mmu-miR-467estar beg:1370 end:1389 pic:3' TATATCCACACACATACATATA 5'& ||||||||.|||.|.| &5' ------GTGTGTGTGTGTGTGT 3' Usp40 mmu-miR-467f beg:1365 end:1389 pic:3' ACATCCACACACACACATATA 5'& |||. ||||||||||||.|.| &5' TGTGTGTGTGTGTGTGTGTGT 3' Usp40 mmu-miR-467g beg:1369 end:1390 pic:3' TATATACACACACATACATAT 5'& |.|.|||||||||.|||.|. &5' -TGTGTGTGTGTGTGTGTGTG 3' Usp40 mmu-miR-485 beg:794 end:815 pic:3' CTTAAGTAGTGCC--GGTCGGAGA 5'& ||| |||||.|.| &5' ----TCAGTTTCTTACCAGCTTTT 3' Usp40 mmu-miR-485star beg:497 end:519 pic:3' CTCTCCTC-TCGGCACATACTGA 5'& |||| ||| ||||||.| &5' ---AGGAAAAGCTATGTATGGC- 3' Usp40 mmu-miR-488 beg:1236 end:1256 pic:3' CTGGTTCTTTGT--CGGAAAGTT 5'& .|. ||| || | |||||| &5' -GCTCAGACACTTTG-CTTTCA- 3' Usp40 mmu-miR-488 beg:887 end:905 pic:3' CTGGTTCTTTG-TCGGAAAGTT 5'& || .| .||.||||| &5' --CCT----GCTGGCTTTTCA- 3' Usp40 mmu-miR-539 beg:1157 end:1179 pic:3' TGTGTGGTTCCTAT--TAAAGAGG 5'& |.||. ||||| .|||||. &5' --ATACT--GGATACTGTTTCTT- 3' Usp40 mmu-miR-540-3p beg:863 end:875 pic:3' GGTCCTAGCTGGAGACTGGA 5'& |||||.||| &5' -----------CTCTGGCCT 3' Usp40 mmu-miR-540-3p beg:537 end:559 pic:3' GGTCCTAGCTG-GAGACTGGA 5'& ||| .| |||||.|| &5' CCACCTAT-GCACTCTGGCC- 3' Usp40 mmu-miR-544 beg:486 end:504 pic:3' CTCGAACGATTTTTACGTCTTA 5'& ||| ||| |||||.| &5' -AGCCAGCT-----TGCAGGA- 3' Usp40 mmu-miR-574-3p beg:1365 end:1390 pic:3' ACACCCACACACGTACTCGCAC 5'& |||| |||||||..|| |.||| &5' TGTGTGTGTGTGTGTGTGTGTG 3' Usp40 mmu-miR-592 beg:178 end:194 pic:3' TGTAGTAGCGTATAACTGTGTTA 5'& || |||||||. &5' --------GCTCTGTGACACAG- 3' Usp40 mmu-miR-615-5p beg:723 end:743 pic:3' CTAGGCTCGTGGCC----CCTGGGGG 5'& |. |||| || ||||||. &5' ---CT-AGCA--GGTTTAGGACCCT- 3' Usp40 mmu-miR-654-5p beg:789 end:809 pic:3' TGTGTACA-AGACGTCGAATGGT 5'& || || |. ||||||| &5' ------GTATCAGTTTCTTACCA 3' Usp40 mmu-miR-666-3p beg:1311 end:1332 pic:3' TCGTCCGCTAGTGCGACGTCGG 5'& || |.| ||||||||| &5' --CAAGTGCTA--GCTGCAGCC 3' Usp40 mmu-miR-669f beg:1366 end:1388 pic:3' TATGCACACACACATACATATAC 5'& ||||||||||.|||.|.|| &5' ----GTGTGTGTGTGTGTGTGTG 3' Usp40 mmu-miR-669h-5p beg:530 end:551 pic:3' CGTGAGTTGATATGTGGGTACGTA 5'& |.| ||| ||||.||||| &5' ----TTATCTAC-CACCTATGCA- 3' Usp40 mmu-miR-669m beg:1366 end:1391 pic:3' TATACAAACACACCTACATATA 5'& .|.||| |||||| |||.|.| &5' GTGTGTGTGTGTGTGTGTGTGT 3' Usp40 mmu-miR-670 beg:1400 end:1419 pic:3' AAGTGGTGTATGTGA-GTCCCTA 5'& |.| ||| |||||| &5' ------ATAGACAAAACAGGGA- 3' Usp40 mmu-miR-671-5p beg:913 end:933 pic:3' GAGGTCGGGGAGGTCCCGAAGGA 5'& ||||. |. ||||||. &5' ---CAGCTATGCT--GGCTTCT- 3' Usp40 mmu-miR-677 beg:705 end:724 pic:3' AGTCTTCGATTAG-TAGTGACTT 5'& ||| ||| ||.|||||| &5' -----AGC--ATCTATTACTGAA 3' Usp40 mmu-miR-681 beg:936 end:957 pic:3' TCGACGGACG-GTCGCTCCGAC 5'& ||||| ||| |||| ||. &5' AGCTGA-TGCTCAGCT-GGT-- 3' Usp40 mmu-miR-682 beg:669 end:689 pic:3' GTC-TGAAGTGACACTGACGTC 5'& .| |.|| ||| ||||.| &5' -GGTATTTA--TGT-ACTGTA- 3' Usp40 mmu-miR-683 beg:2 end:13 pic:3' CTCCTGTGTCGAATGTCGTCC 5'& |.|||||| &5' ------------TGCAGCAG- 3' Usp40 mmu-miR-684 beg:603 end:624 pic:3' AACTGAACTT--CCCTTTTGA 5'& |.||| |||.||||| &5' ---ATTTGTCTTGGGGAAACT 3' Usp40 mmu-miR-689 beg:549 end:570 pic:3' CCTGGGG-CGG-CTCGCCCCTGC 5'& ||.|. ||| ||| ||||| &5' --ACTCTGGCCAGAGACGGGAC- 3' Usp40 mmu-miR-691 beg:487 end:505 pic:3' AAAAGACGGAGAGAA-GTCCTTA 5'& ||| ||| |||||| &5' ------GCCAG-CTTGCAGGAA- 3' Usp40 mmu-miR-692 beg:286 end:304 pic:3' CTCACTCCGCGAGTTTCTCTA 5'& || .||||||||||. &5' -----AGTTGCTCAAAGAGG- 3' Usp40 mmu-miR-693-3p beg:1450 end:1469 pic:3' AATGTCGGTGT-AGACTTTCGACG 5'& ||| ||| ||||.||| &5' --------ACATTCTTAAAGTTGC 3' Usp40 mmu-miR-697 beg:389 end:408 pic:3' AGAGGTG-TCCTGGTCCTACAA 5'& | | |||| ||||||| &5' ---CTGCAAGGA--AGGATGT- 3' Usp40 mmu-miR-706 beg:1356 end:1368 pic:3' AAAAAACTCTGTCCCAAAGAGA 5'& |||||||.| &5' -------------GGTTTCTTT 3' Usp40 mmu-miR-708 beg:913 end:933 pic:3' GGGTCGATCTAACATTCGAGGAA 5'& |||||| || .|||.|| &5' --CAGCTA---TGCTGGCTTCT- 3' Usp40 mmu-miR-708star beg:356 end:375 pic:3' GATCTTCGAGT-GTCAGATCAAC 5'& ||.| || ||||||| &5' -----AGTTAGTCA-TCTAGTT- 3' Usp40 mmu-miR-708star beg:1340 end:1360 pic:3' GATCTTCGAGTGTC-----AGATCAAC 5'& | |||| |||.|||| &5' --------TGACAGGCCTATCTGGTTG 3' Usp40 mmu-miR-709 beg:627 end:645 pic:3' AGGAGGACGGAGACGGAGG 5'& ||||||| .||| |.| &5' TCCTCCT-TCTCAGTC--- 3' Usp40 mmu-miR-710 beg:1050 end:1061 pic:3' GAGTTGAGAGGGGTTCTGAACC 5'& .||||||| &5' --------------GGACTTGG 3' Usp40 mmu-miR-710 beg:652 end:674 pic:3' GAGTTGAG-AGGGGTTCTGAACC 5'& .|||| |. .|||.|||| &5' --TAACTGATTGAAGAGATTTGG 3' Usp40 mmu-miR-713 beg:1364 end:1383 pic:3' CGACACACGGAAGTCACGT 5'& .||||||. | |||. &5' -TTGTGTGTGTGT-GTGT- 3' Usp40 mmu-miR-742 beg:881 end:903 pic:3' AAATGGGTCGT--ACCACCGAAAG 5'& |.||| || |||||||. &5' -----CTAGCCCCTGCTGGCTTTT 3' Usp40 mmu-miR-743b-5p beg:265 end:283 pic:3' ACTACCTGTGGTCAGACTTGT 5'& | |.||. ||||.||| &5' ----GTATACT--TCTGGACA 3' Usp40 mmu-miR-744star beg:1212 end:1222 pic:3' TCCAACTCCAATCACCGTTGTC 5'& |||||.| &5' --------------GGCAATA- 3' Usp40 mmu-miR-760 beg:187 end:209 pic:3' AGGGGTGTC--TGG-GTCTCGGC 5'& ||||| .|. |||||||| &5' ----CACAGCAGCTGCAGAGCCG 3' Usp40 mmu-miR-763 beg:937 end:956 pic:3' CGGTGACCAAGAAGGGTCGACC 5'& .||| |.||||||| &5' ---GCTGATG---CTCAGCTGG 3' Usp40 mmu-miR-764-3p beg:612 end:634 pic:3' TGTCAACGGTGATACCGGAGGA 5'& | | |||. |||||||| &5' ---GGGGAAACTGAGGCCTCCT 3' Usp40 mmu-miR-767 beg:828 end:849 pic:3' ACGAGTCTGTTG-GTACCACGT 5'& |||| ..|||||.| &5' ----CAGAACTGATGTGGTGTA 3' Usp40 mmu-miR-767 beg:898 end:918 pic:3' ACGAGTCTGTTGGTACCACGT 5'& .||| |. .| ||||||| &5' --TTCACATT-TC-TGGTGCA 3' Usp40 mmu-miR-7a beg:804 end:826 pic:3' TGTTGTTTTAGTGATCAGAAGGT 5'& ||.| |.|| ||||||| &5' -CAGCTT--TTACATGTCTTCC- 3' Usp40 mmu-miR-7b beg:804 end:826 pic:3' TGTTGTTTTAGTGTTCAGAAGGT 5'& ||.| |.||| ||||||| &5' -CAGCTT--TTACATGTCTTCC- 3' Usp40 mmu-miR-871 beg:1143 end:1161 pic:3' GTACTGAC-CGTGATTAGACTTAT 5'& |||| || | ||||.||| &5' ----ACTGAGC-CC--TCTGGATA 3' Usp40 mmu-miR-872 beg:737 end:758 pic:3' GGACTTGATTGTTCATTGGAA 5'& ||||..||.|| ||.||| &5' CCTGGGCTGACT--TAGCCT- 3' Usp40 mmu-miR-872 beg:1179 end:1203 pic:3' GGAC-TTGATTGT-TCATTGGAA 5'& ||| ||||.||| .|| |||| &5' -CTGTAACTGACATGGTT-CCTT 3' Usp40 mmu-miR-872 beg:90 end:112 pic:3' GGACTTGATTGTTCATTGGAA 5'& ||| || |.| |||.|.|| &5' CCTCCAC-AGCTAGTGATCT- 3' Usp40 mmu-miR-876-5p beg:583 end:599 pic:3' ATCACTAAGTGTCTCTTTAGGT 5'& |||| ||||||| &5' --------CACAAC-AAATCCA 3' Usp40 mmu-miR-878-3p beg:986 end:1011 pic:3' AGATGGG-TCACACCACAGTACG 5'& |.|.|| ||| || |||||||. &5' TTTGCCAGAGT-TGATGTCATGT 3' Usp40 mmu-miR-883a-5p beg:952 end:976 pic:3' CATTG--ACGATGAAGAGAGTCGT 5'& ||||. |||| |||| ||. |. &5' GTAATCTTGCT-CTTC-CTTTGT- 3' Usp40 mmu-miR-883b-5p beg:624 end:643 pic:3' ACTGACGATGG-GTAAGAGTCAT 5'& || || | |||||||| &5' -----GCCTCCTCCTTCTCAGT- 3' Usp40 mmu-miR-9 beg:558 end:579 pic:3' AGTATGTCGA-TCTATTGGTTTCT 5'& || .|| |.|||||| &5' ------AGACGGGACCATCAAAGA 3' Usp40 mmu-miR-98 beg:1297 end:1316 pic:3' TTGTTATGTTGAATG-ATGGAGT 5'& ||. || |.||||| &5' -------CAGAAGACATGCCTCA 3' Usp40 mmu-miR-101a beg:666 end:689 pic:3' AAGTCAATAGTGTCATGACAT 5'& || || |.|. |||||||| &5' TTTGGTATTTAT-GTACTGTA 3' Usp40 mmu-miR-488star beg:1338 end:1357 pic:3' AACTCTCACGATAATAGACCC 5'& |||| || || ||||||| &5' TTGACAG-GCC--TATCTGG- 3' Usp40 mmu-miR-374 beg:1028 end:1046 pic:3' GTGAATCGTCCAACATAATATA 5'& |||| |||||||||| &5' -----AGCAC-TTGTATTATA- 3'

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Usp40 RAID00008074 mmu-miR-497a-5p miRNA MIMAT0003453 Usp40 mRNA 227334 Prediction 0.1828 Usp40 RAID00029053 mmu-miR-24-3p miRNA MIMAT0000219 Usp40 mRNA 227334 NGS (Next Generation Sequencing)//Prediction 0.6308 Usp40 RAID00051944 mmu-miR-295-3p miRNA MIMAT0000373 Usp40 mRNA 227334 Prediction 0.1828 Usp40 RAID00072194 mmu-miR-26a-5p miRNA MIMAT0000533 Usp40 mRNA 227334 NGS (Next Generation Sequencing)//Prediction 0.6308 Usp40 RAID00181604 mmu-miR-338-3p miRNA MIMAT0000582 Usp40 mRNA 227334 Prediction 0.1828 Usp40 RAID00219630 mmu-miR-6996-5p miRNA MIMAT0027894 Usp40 mRNA 227334 Prediction 0.1828 Usp40 RAID00254041 mmu-miR-18b-5p miRNA MIMAT0004858 Usp40 mRNA 227334 Prediction 0.1828 Usp40 RAID00256963 mmu-miR-103-3p miRNA MIMAT0000546 Usp40 mRNA 227334 Prediction 0.1828 Usp40 RAID00274412 mmu-miR-7b-5p miRNA MIMAT0000678 Usp40 mRNA 227334 Prediction 0.2202 Usp40 RAID00290768 mmu-miR-361-5p miRNA MIMAT0000704 Usp40 mRNA 227334 Prediction 0.1828 Usp40 RAID00323983 mmu-miR-3067-5p miRNA MIMAT0014840 Usp40 mRNA 227334 CLIP-seq 0.5483 Usp40 RAID00354358 mmu-miR-3082-3p miRNA MIMAT0014873 Usp40 mRNA 227334 Prediction 0.1828 Usp40 RAID00432547 mmu-miR-7022-5p miRNA MIMAT0027948 Usp40 mRNA 227334 Prediction 0.1828 Usp40 RAID00476403 mmu-miR-302b-3p miRNA MIMAT0003374 Usp40 mRNA 227334 Prediction 0.1828 Usp40 RAID00484389 mmu-miR-153-3p miRNA MIMAT0000163 Usp40 mRNA 227334 Prediction 0.1828 Usp40 RAID00653488 mmu-miR-144-3p miRNA MIMAT0000156 Usp40 mRNA 227334 CLIP-seq//Prediction 0.6308 Usp40 RAID00692288 mmu-miR-215-3p miRNA MIMAT0017169 Usp40 mRNA 227334 Prediction 0.1828 Usp40 RAID00705654 mmu-miR-33-3p miRNA MIMAT0004666 Usp40 mRNA 227334 Prediction 0.1828 Usp40 RAID00751862 mmu-miR-200c-3p miRNA MIMAT0000657 Usp40 mRNA 227334 Prediction 0.1828 Usp40 RAID00793461 mmu-miR-7008-3p miRNA MIMAT0027921 Usp40 mRNA 227334 Prediction 0.1828 Usp40 RAID00892064 mmu-miR-20b-5p miRNA MIMAT0003187 Usp40 mRNA 227334 Prediction 0.1828 Usp40 RAID00901732 mmu-miR-302d-3p miRNA MIMAT0003377 Usp40 mRNA 227334 Prediction 0.1828 Usp40 RAID01019522 mmu-miR-106b-5p miRNA MIMAT0000386 Usp40 mRNA 227334 Prediction 0.1828 Usp40 RAID01182278 mmu-miR-6715-5p miRNA MIMAT0029876 Usp40 mRNA 227334 Prediction 0.1828 Usp40 RAID01225767 mmu-miR-155-5p miRNA MIMAT0000165 Usp40 mRNA 227334 CLIP-seq//Prediction 0.6308 Usp40 RAID01257677 mmu-miR-184-3p miRNA MIMAT0000213 Usp40 mRNA 227334 Prediction 0.1828 Usp40 RAID01278814 mmu-miR-204-3p miRNA MIMAT0017002 Usp40 mRNA 227334 Prediction 0.1828 Usp40 RAID01335860 mmu-miR-212-3p miRNA MIMAT0000659 Usp40 mRNA 227334 Prediction 0.1828 Usp40 RAID01419007 mmu-miR-669c-3p miRNA MIMAT0017253 Usp40 mRNA 227334 Prediction 0.1828 Usp40 RAID01431264 mmu-miR-344h-5p miRNA MIMAT0022383 Usp40 mRNA 227334 Prediction 0.1828 Usp40 RAID01505692 mmu-miR-381-3p miRNA MIMAT0000746 Usp40 mRNA 227334 Prediction 0.1828 Usp40 RAID01569715 mmu-miR-214-5p miRNA MIMAT0004664 Usp40 mRNA 227334 Prediction 0.1828 Usp40 RAID01795543 mmu-miR-194-5p miRNA MIMAT0000224 Usp40 mRNA 227334 Prediction 0.1828 Usp40 RAID01801316 mmu-miR-6947-5p miRNA MIMAT0027794 Usp40 mRNA 227334 Prediction 0.1828 Usp40 RAID01802065 mmu-miR-340-5p miRNA MIMAT0004651 Usp40 mRNA 227334 CLIP-seq//Prediction 0.6308 Usp40 RAID01829668 mmu-miR-149-5p miRNA MIMAT0000159 Usp40 mRNA 227334 Prediction 0.1828 Usp40 RAID01986213 mmu-miR-3547-5p miRNA MIMAT0027832 Usp40 mRNA 227334 Prediction 0.1828 Usp40 RAID01987802 mmu-miR-7684-5p miRNA MIMAT0029890 Usp40 mRNA 227334 Prediction 0.1828 Usp40 RAID01988317 mmu-miR-6404 miRNA MIMAT0025156 Usp40 mRNA 227334 Prediction 0.1828 Usp40 RAID02019654 mmu-miR-26b-5p miRNA MIMAT0000534 Usp40 mRNA 227334 Prediction 0.1828 Usp40 RAID02102594 mmu-miR-17-5p miRNA MIMAT0000649 Usp40 mRNA 227334 Prediction 0.1828 Usp40 RAID02188220 mmu-miR-294-3p miRNA MIMAT0000372 Usp40 mRNA 227334 Prediction 0.1828 Usp40 RAID02223891 mmu-miR-7116-5p miRNA MIMAT0028129 Usp40 mRNA 227334 Prediction 0.1828 Usp40 RAID02273660 mmu-miR-505-3p miRNA MIMAT0003513 Usp40 mRNA 227334 Prediction 0.1828 Usp40 RAID02376412 mmu-miR-190a-5p miRNA MIMAT0000220 Usp40 mRNA 227334 CLIP-seq//Prediction 0.6308 Usp40 RAID02386949 mmu-miR-299a-3p miRNA MIMAT0004577 Usp40 mRNA 227334 Prediction 0.1828 Usp40 RAID02390655 mmu-miR-7a-5p miRNA MIMAT0000677 Usp40 mRNA 227334 Prediction 0.2202 Usp40 RAID02535524 mmu-miR-421-3p miRNA MIMAT0004869 Usp40 mRNA 227334 Prediction 0.1828 Usp40 RAID02542428 mmu-miR-93-5p miRNA MIMAT0000540 Usp40 mRNA 227334 Prediction 0.1828 Usp40 RAID02564504 mmu-miR-101a-3p miRNA MIMAT0000133 Usp40 mRNA 227334 CLIP-seq//Prediction 0.6478 Usp40 RAID02716745 mmu-miR-374b-5p miRNA MIMAT0003727 Usp40 mRNA 227334 Prediction 0.1828 Usp40 RAID02809001 mmu-miR-20a-5p miRNA MIMAT0000529 Usp40 mRNA 227334 Prediction 0.1828 Usp40 RAID02901888 mmu-miR-10a-5p miRNA MIMAT0000648 Usp40 mRNA 227334 CLIP-seq//Prediction 0.6308 Usp40 RAID02912081 mmu-miR-216b-5p miRNA MIMAT0003729 Usp40 mRNA 227334 Prediction 0.1828 Usp40 RAID02928683 mmu-miR-7074-5p miRNA MIMAT0028054 Usp40 mRNA 227334 Prediction 0.1828 Usp40 RAID02945098 mmu-miR-291a-3p miRNA MIMAT0000368 Usp40 mRNA 227334 Prediction 0.1828 Usp40 RAID03019204 mmu-miR-302c-3p miRNA MIMAT0003376 Usp40 mRNA 227334 Prediction 0.1828 Usp40 RAID03045020 mmu-miR-6540-3p miRNA MIMAT0025586 Usp40 mRNA 227334 Prediction 0.1828 Usp40 RAID03112683 mmu-miR-7116-3p miRNA MIMAT0028130 Usp40 mRNA 227334 Prediction 0.1828 Usp40 RAID03152753 mmu-miR-106a-5p miRNA MIMAT0000385 Usp40 mRNA 227334 Prediction 0.1828 Usp40 RAID03160671 mmu-miR-5709-3p miRNA MIMAT0027104 Usp40 mRNA 227334 Prediction 0.1828 Usp40 RAID03180468 mmu-miR-15a-5p miRNA MIMAT0000526 Usp40 mRNA 227334 Prediction 0.1828 Usp40 RAID03196238 mmu-miR-223-3p miRNA MIMAT0000665 Usp40 mRNA 227334 Prediction 0.2381 Usp40 RAID03223605 mmu-miR-6951-3p miRNA MIMAT0027803 Usp40 mRNA 227334 Prediction 0.1828 Usp40 RAID03248482 mmu-miR-18a-5p miRNA MIMAT0000528 Usp40 mRNA 227334 Prediction 0.1828 Usp40 RAID03254459 mmu-miR-1946b miRNA MIMAT0009443 Usp40 mRNA 227334 Prediction 0.1828 Usp40 RAID03281179 mmu-miR-337-3p miRNA MIMAT0000578 Usp40 mRNA 227334 Prediction 0.1828 Usp40 RAID03297028 mmu-miR-101b-3p miRNA MIMAT0000616 Usp40 mRNA 227334 CLIP-seq//Prediction 0.6559 Usp40 RAID03367068 mmu-miR-6405 miRNA MIMAT0025157 Usp40 mRNA 227334 Prediction 0.1828 Usp40 RAID03432069 mmu-miR-200b-3p miRNA MIMAT0000233 Usp40 mRNA 227334 Prediction 0.1828 Usp40 RAID03438452 mmu-miR-6368 miRNA MIMAT0025112 Usp40 mRNA 227334 Prediction 0.1828 Usp40 RAID03597418 mmu-miR-6919-5p miRNA MIMAT0027738 Usp40 mRNA 227334 Prediction 0.1828 Usp40 RAID03610277 mmu-miR-1898 miRNA MIMAT0007875 Usp40 mRNA 227334 Prediction 0.1828 Usp40 RAID03654054 mmu-miR-339-5p miRNA MIMAT0000584 Usp40 mRNA 227334 CLIP-seq//Prediction 0.6308 Usp40 RAID03716290 mmu-miR-107-3p miRNA MIMAT0000647 Usp40 mRNA 227334 Prediction 0.1828 Usp40 RAID03762420 mmu-miR-320-3p miRNA MIMAT0000666 Usp40 mRNA 227334 Prediction 0.2202 Usp40 RAID03793106 mmu-miR-302a-3p miRNA MIMAT0000380 Usp40 mRNA 227334 Prediction 0.1828 Usp40 RAID03833921 mmu-miR-10b-5p miRNA MIMAT0000208 Usp40 mRNA 227334 CLIP-seq//Prediction 0.6308 Usp40 RAID03869977 mmu-miR-344e-5p miRNA MIMAT0014923 Usp40 mRNA 227334 Prediction 0.1828 Usp40 RAID03895308 mmu-miR-429-3p miRNA MIMAT0001537 Usp40 mRNA 227334 Prediction 0.1828 Usp40 RAID03951669 mmu-miR-8111 miRNA MIMAT0031417 Usp40 mRNA 227334 Prediction 0.1828 Usp40 RAID03984097 mmu-miR-322-5p miRNA MIMAT0000548 Usp40 mRNA 227334 Prediction 0.1828